Package evaluation of TurbulenceConvection on Julia 1.13.0-DEV.985 (9c94e7ae32*) started at 2025-08-15T07:47:08.966 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.93s ################################################################################ # Installation # Installing TurbulenceConvection... Resolving package versions... Installed VertexSafeGraphs ───────────────── v0.2.0 Installed DefineSingletons ───────────────── v0.1.2 Installed MKL_jll ────────────────────────── v2025.2.0+0 Installed ContextVariablesX ──────────────── v0.1.3 Installed InlineStrings ──────────────────── v1.4.4 Installed GPUCompiler ────────────────────── v0.25.0 Installed FLoops ─────────────────────────── v0.2.2 Installed SIMDTypes ──────────────────────── v0.1.0 Installed OrderedCollections ─────────────── v1.8.1 Installed Functors ───────────────────────── v0.4.12 Installed Optim ──────────────────────────── v1.11.0 Installed CpuId ──────────────────────────── v0.3.1 Installed PreallocationTools ─────────────── v0.4.24 Installed EnzymeCore ─────────────────────── v0.6.6 Installed InitialValues ──────────────────── v0.3.1 Installed SentinelArrays ─────────────────── v1.4.8 Installed ArgCheck ───────────────────────── v2.5.0 Installed ChainRules ─────────────────────── v1.72.5 Installed GaussQuadrature ────────────────── v0.5.8 Installed StaticArrayInterface ───────────── v1.8.0 Installed Distances ──────────────────────── v0.10.12 Installed QuadGK ─────────────────────────── v2.11.2 Installed NaNMath ────────────────────────── v1.1.3 Installed FiniteDifferences ──────────────── v0.12.32 Installed OpenSpecFun_jll ────────────────── v0.5.6+0 Installed FLoopsBase ─────────────────────── v0.1.1 Installed HDF5_jll ───────────────────────── v1.14.6+0 Installed CLIMAParameters ────────────────── v0.7.26 Installed PackageExtensionCompat ─────────── v1.0.2 Installed FastBroadcast ──────────────────── v0.2.8 Installed LinearSolve ────────────────────── v2.22.1 Installed EnumX ──────────────────────────── v1.0.5 Installed ScopedValues ───────────────────── v1.4.0 Installed Tables ─────────────────────────── v1.12.1 Installed NLSolversBase ──────────────────── v7.8.3 Installed JumpProcesses ──────────────────── v9.10.1 Installed BandedMatrices ─────────────────── v1.9.4 Installed DiffEqBase ─────────────────────── v6.145.2 Installed InverseFunctions ───────────────── v0.1.17 Installed Reexport ───────────────────────── v1.2.2 Installed Missings ───────────────────────── v1.2.0 Installed Preferences ────────────────────── v1.5.0 Installed MaybeInplace ───────────────────── v0.1.4 Installed TableTraits ────────────────────── v1.0.1 Installed NonlinearSolve ─────────────────── v3.1.0 Installed Static ─────────────────────────── v0.8.10 Installed LaTeXStrings ───────────────────── v1.4.0 Installed Crayons ────────────────────────── v4.1.1 Installed UnPack ─────────────────────────── v1.0.2 Installed SortingAlgorithms ──────────────── v1.2.2 Installed LevyArea ───────────────────────── v1.0.0 Installed MLStyle ────────────────────────── v0.4.17 Installed KLU ────────────────────────────── v0.4.1 Installed RecursiveArrayTools ────────────── v2.38.10 Installed Inflate ────────────────────────── v0.1.5 Installed DataStructures ─────────────────── v0.18.22 Installed ADTypes ────────────────────────── v0.2.7 Installed MacroTools ─────────────────────── v0.5.16 Installed DiffResults ────────────────────── v1.1.0 Installed GenericSchur ───────────────────── v0.5.5 Installed ManualMemory ───────────────────── v0.1.8 Installed libaec_jll ─────────────────────── v1.1.3+0 Installed FillArrays ─────────────────────── v1.13.0 Installed Tricks ─────────────────────────── v0.1.12 Installed NVTX ───────────────────────────── v0.3.5 Installed VectorizationBase ──────────────── v0.21.71 Installed DelimitedFiles ─────────────────── v1.9.1 Installed RecursiveFactorization ─────────── v0.2.23 Installed oneTBB_jll ─────────────────────── v2022.0.0+0 Installed ArnoldiMethod ──────────────────── v0.4.0 Installed StatsBase ──────────────────────── v0.34.6 Installed Optimisers ─────────────────────── v0.3.4 Installed TriangularSolve ────────────────── v0.2.1 Installed ExprTools ──────────────────────── v0.1.10 Installed ArrayInterface ─────────────────── v7.7.1 Installed HostCPUFeatures 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IrrationalConstants ────────────── v0.2.4 Installed TruncatedStacktraces ───────────── v1.4.0 Installed IntegerMathUtils ───────────────── v0.1.3 Installed ArrayLayouts ───────────────────── v1.11.2 Installed SimpleTraits ───────────────────── v0.9.5 Installed Hwloc_jll ──────────────────────── v2.12.1+0 Installed Dierckx_jll ────────────────────── v0.2.0+0 Installed OpenMPI_jll ────────────────────── v5.0.8+0 Installed UnsafeAtomicsLLVM ──────────────── v0.1.5 Installed CUDA_Runtime_jll ───────────────── v0.10.1+0 Installed SplittablesBase ────────────────── v0.1.15 Installed Scratch ────────────────────────── v1.3.0 Installed Setfield ───────────────────────── v1.1.2 Installed Transducers ────────────────────── v0.4.84 Installed Baselet ────────────────────────── v0.1.1 Installed PooledArrays ───────────────────── v1.4.3 Installed PDMats ─────────────────────────── v0.11.35 Installed BlockArrays ────────────────────── v0.16.43 Installed BFloat16s ──────────────────────── v0.4.2 Installed ResettableStacks ───────────────── v1.1.1 Installed DocStringExtensions ────────────── v0.9.5 Installed OneHotArrays ───────────────────── v0.2.10 Installed CompositionsBase ───────────────── v0.1.2 Installed Rmath_jll ──────────────────────── v0.5.1+0 Installed PkgVersion ─────────────────────── v0.3.3 Installed NameResolution ─────────────────── v0.1.5 Installed CommonSolve ────────────────────── v0.2.4 Installed ForwardDiff ────────────────────── v0.10.38 Installed OperatorFlux ───────────────────── v0.1.3 Installed SimpleUnPack ───────────────────── v1.1.0 Installed SLEEFPirates ───────────────────── v0.6.43 Installed MPICH_jll ──────────────────────── v4.3.1+0 Installed BitTwiddlingConvenienceFunctions ─ v0.1.6 Installed AliasTables ────────────────────── v1.1.3 Installed OrdinaryDiffEq ─────────────────── v6.66.0 Installed SparseInverseSubset ────────────── v0.1.2 Installed MicrosoftMPI_jll ───────────────── v10.1.4+3 Installed HashArrayMappedTries ───────────── v0.2.0 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Installed AbstractFFTs ───────────────────── v1.5.0 Installed BangBang ───────────────────────── v0.4.4 Installed ColorTypes ─────────────────────── v0.12.1 Installed StringManipulation ─────────────── v0.4.1 Installed Requires ───────────────────────── v1.3.1 Installed FunctionWrappers ───────────────── v1.1.3 Installed CubedSphere ────────────────────── v0.2.6 Installed LLVM ───────────────────────────── v6.6.3 Installed DiffRules ──────────────────────── v1.15.1 Installed LogExpFunctions ────────────────── v0.3.29 Installed Tullio ─────────────────────────── v0.3.8 Installed PrettyTables ───────────────────── v2.4.0 Installed Distributions ──────────────────── v0.25.120 Installed FastClosures ───────────────────── v0.3.2 Installed Rmath ──────────────────────────── v0.8.0 Installed CloseOpenIntervals ─────────────── v0.1.13 Installed UnsafeAtomics ──────────────────── v0.2.1 Installed FiniteDiff ─────────────────────── v2.28.0 Installed StatsFuns ──────────────────────── v1.5.0 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Installed PositiveFactorizations ─────────── v0.2.4 Installed StatsAPI ───────────────────────── v1.7.1 Installed Statistics ─────────────────────── v1.11.1 Installed ChainRulesTestUtils ────────────── v1.13.0 Installed LazyArrays ─────────────────────── v1.10.0 Installed Atomix ─────────────────────────── v0.1.0 Installed PrecompileTools ────────────────── v1.3.2 Installed TimerOutputs ───────────────────── v0.5.29 Installed CUDA_Runtime_Discovery ─────────── v0.2.4 Installed OffsetArrays ───────────────────── v1.17.0 Installed StructArrays ───────────────────── v0.6.18 Installed CPUSummary ─────────────────────── v0.2.6 Installed NLsolve ────────────────────────── v4.5.1 Installed ChainRulesCore ─────────────────── v1.26.0 Installed IfElse ─────────────────────────── v0.1.1 Installed MatrixFactorizations ───────────── v2.2.0 Installed Parameters ─────────────────────── v0.12.3 Installed CUDA_Driver_jll ────────────────── v0.7.0+1 Installed Thermodynamics ─────────────────── v0.10.2 Installed MuladdMacro ────────────────────── v0.2.4 Installed KernelAbstractions ─────────────── v0.9.18 Installed DiffEqNoiseProcess ─────────────── v5.24.1 Installed PtrArrays ──────────────────────── v1.3.0 Installed FixedPointNumbers ──────────────── v0.8.5 Installed Elliptic ───────────────────────── v1.0.1 Installed IntervalSets ───────────────────── v0.7.11 Installed MPIPreferences ─────────────────── v0.1.11 Installed SpecialFunctions ───────────────── v2.5.1 Installed SimpleNonlinearSolve ───────────── v1.4.0 Installed FFTW_jll ───────────────────────── v3.3.11+0 Installed ShowCases ──────────────────────── v0.1.0 Installed FFTW ───────────────────────────── v1.9.0 Installed MPItrampoline_jll ──────────────── v5.5.4+0 Installed PolyesterWeave ─────────────────── v0.2.2 Installed LineSearches ───────────────────── v7.4.0 Installed TaylorSeries ───────────────────── v0.17.8 Installed HDF5 ───────────────────────────── v0.17.2 Installed ClimaComms ─────────────────────── v0.5.8 Installing 11 artifacts Installed artifact JuliaNVTXCallbacks 8.6 KiB Installed artifact NVTX 13.7 KiB Installed artifact Rmath 121.9 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact oneTBB 435.6 KiB Installed artifact libaec 96.2 KiB Installed artifact Dierckx 149.2 KiB Installed artifact FFTW 2.2 MiB Installed artifact MPICH 3.3 MiB Installed artifact Hwloc 3.5 MiB Installed artifact HDF5 5.7 MiB Updating `~/.julia/environments/v1.13/Project.toml` [8e072fc4] + TurbulenceConvection v1.3.6 Updating `~/.julia/environments/v1.13/Manifest.toml` Precompiling packages... 3924.4 ms ✓ Preferences 1933.2 ms ✓ JLLWrappers 7522.3 ms ✓ CUDA_Driver_jll 3 dependencies successfully precompiled in 14 seconds. 28 already precompiled. 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[8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 45.9s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 5327.6 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. Precompiling packages... 997.5 ms ✓ Preferences 972.7 ms ✓ JLLWrappers 4579.0 ms ✓ CUDA_Driver_jll 3 dependencies successfully precompiled in 7 seconds. 28 already precompiled. ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:76 Precompiling package dependencies... ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 339 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_73644.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2376 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x0000748d5e3531c0 Total snapshots: 362. Utilization: 0% ╎362 @Base/task.jl:1129 wait_forever() 361╎ 362 @Base/task.jl:1192 wait() ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_73644.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2376 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000075ca7a9f0c40 Total snapshots: 313. Utilization: 0% ╎313 @Base/task.jl:1129 wait_forever() 312╎ 313 @Base/task.jl:1192 wait() [339] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/precompile.jl:37 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_73644.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2376 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) Allocations: 33150149 (Pool: 33148105; Big: 2044); GC: 56 [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:152 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_73644.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2376 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) Allocations: 25987461 (Pool: 25986379; Big: 1082); GC: 43 PkgEval terminated after 2735.52s: test duration exceeded the time limit