Package evaluation of SplitClusterTest on Julia 1.13.0-DEV.985 (9c94e7ae32*) started at 2025-08-15T01:31:29.335


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 9.43s


################################################################################
# Installation
#

Installing SplitClusterTest...
   Resolving package versions...
   Installed Conda ─ v1.10.2
   Installed RCall ─ v0.13.18
    Updating `~/.julia/environments/v1.13/Project.toml`
  [3179d415] + SplitClusterTest v0.1.0
    Updating `~/.julia/environments/v1.13/Manifest.toml`
  [7d9f7c33] + Accessors v0.1.42
  [66dad0bd] + AliasTables v1.1.3
⌅ [324d7699] + CategoricalArrays v0.10.8
  [aaaa29a8] + Clustering v0.15.8
  [861a8166] + Combinatorics v1.0.3
  [38540f10] + CommonSolve v0.2.4
  [bbf7d656] + CommonSubexpressions v0.3.1
  [34da2185] + Compat v4.18.0
  [a33af91c] + CompositionsBase v0.1.2
  [8f4d0f93] + Conda v1.10.2
  [187b0558] + ConstructionBase v1.6.0
⌃ [ae264745] + Copulas v0.1.29
  [a8cc5b0e] + Crayons v4.1.1
  [9a962f9c] + DataAPI v1.16.0
  [a93c6f00] + DataFrames v1.7.0
⌅ [864edb3b] + DataStructures v0.18.22
  [e2d170a0] + DataValueInterfaces v1.0.0
  [163ba53b] + DiffResults v1.1.0
  [b552c78f] + DiffRules v1.15.1
  [b4f34e82] + Distances v0.10.12
  [31c24e10] + Distributions v0.25.120
  [ffbed154] + DocStringExtensions v0.9.5
  [1a297f60] + FillArrays v1.13.0
  [f6369f11] + ForwardDiff v1.0.1
  [19dc6840] + HCubature v1.7.0
  [34004b35] + HypergeometricFunctions v0.3.28
  [842dd82b] + InlineStrings v1.4.4
  [18e54dd8] + IntegerMathUtils v0.1.3
  [3587e190] + InverseFunctions v0.1.17
  [41ab1584] + InvertedIndices v1.3.1
  [92d709cd] + IrrationalConstants v0.2.4
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.1
  [682c06a0] + JSON v0.21.4
  [b964fa9f] + LaTeXStrings v1.4.0
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [1914dd2f] + MacroTools v0.5.16
  [e1d29d7a] + Missings v1.2.0
  [37188c8d] + MvNormalCDF v0.3.2
  [77ba4419] + NaNMath v1.1.3
  [b8a86587] + NearestNeighbors v0.4.22
  [bac558e1] + OrderedCollections v1.8.1
  [90014a1f] + PDMats v0.11.35
  [69de0a69] + Parsers v2.8.3
  [2dfb63ee] + PooledArrays v1.4.3
  [aea7be01] + PrecompileTools v1.3.2
  [21216c6a] + Preferences v1.5.0
  [08abe8d2] + PrettyTables v2.4.0
  [27ebfcd6] + Primes v0.5.7
  [43287f4e] + PtrArrays v1.3.0
  [1fd47b50] + QuadGK v2.11.2
⌅ [6f49c342] + RCall v0.13.18
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [79098fc4] + Rmath v0.8.0
  [f2b01f46] + Roots v2.2.8
  [91c51154] + SentinelArrays v1.4.8
  [1277b4bf] + ShiftedArrays v2.0.0
  [a2af1166] + SortingAlgorithms v1.2.2
  [276daf66] + SpecialFunctions v2.5.1
  [3179d415] + SplitClusterTest v0.1.0
  [90137ffa] + StaticArrays v1.9.14
  [1e83bf80] + StaticArraysCore v1.4.3
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.7.1
  [2913bbd2] + StatsBase v0.34.6
  [4c63d2b9] + StatsFuns v1.5.0
  [3eaba693] + StatsModels v0.7.5
  [892a3eda] + StringManipulation v0.4.1
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.1
⌅ [6aa5eb33] + TaylorSeries v0.18.5
  [81def892] + VersionParsing v1.3.0
⌅ [48feb556] + WilliamsonTransforms v0.1.7
  [1b915085] + WinReg v1.0.0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [f50d1b31] + Rmath_jll v0.5.1+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [9fa8497b] + Future v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [b27032c2] + LibCURL v0.6.4
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [de0858da] + Printf v1.11.0
  [3fa0cd96] + REPL v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.13.0
  [f489334b] + StyledStrings v1.11.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.15.0+1
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2025.7.15
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [05823500] + OpenLibm_jll v0.8.5+0
  [458c3c95] + OpenSSL_jll v3.5.2+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [83775a58] + Zlib_jll v1.3.1+2
  [3161d3a3] + Zstd_jll v1.5.7+1
  [8e850b90] + libblastrampoline_jll v5.13.1+0
  [8e850ede] + nghttp2_jll v1.65.0+0
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`
    Building Conda → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b19db3927f0db4151cb86d073689f2428e524576/build.log`
    Building RCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/3084689b18f9e5e817a6ce9a83a7654d8ad0f2f6/build.log`

Installation completed after 86.13s


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# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 153.52s


################################################################################
# Testing
#

     Testing SplitClusterTest
      Status `/tmp/jl_19Sw5Z/Project.toml`
  [3179d415] SplitClusterTest v0.1.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_19Sw5Z/Manifest.toml`
  [7d9f7c33] Accessors v0.1.42
  [66dad0bd] AliasTables v1.1.3
⌅ [324d7699] CategoricalArrays v0.10.8
  [aaaa29a8] Clustering v0.15.8
  [861a8166] Combinatorics v1.0.3
  [38540f10] CommonSolve v0.2.4
  [bbf7d656] CommonSubexpressions v0.3.1
  [34da2185] Compat v4.18.0
  [a33af91c] CompositionsBase v0.1.2
  [8f4d0f93] Conda v1.10.2
  [187b0558] ConstructionBase v1.6.0
⌃ [ae264745] Copulas v0.1.29
  [a8cc5b0e] Crayons v4.1.1
  [9a962f9c] DataAPI v1.16.0
  [a93c6f00] DataFrames v1.7.0
⌅ [864edb3b] DataStructures v0.18.22
  [e2d170a0] DataValueInterfaces v1.0.0
  [163ba53b] DiffResults v1.1.0
  [b552c78f] DiffRules v1.15.1
  [b4f34e82] Distances v0.10.12
  [31c24e10] Distributions v0.25.120
  [ffbed154] DocStringExtensions v0.9.5
  [1a297f60] FillArrays v1.13.0
  [f6369f11] ForwardDiff v1.0.1
  [19dc6840] HCubature v1.7.0
  [34004b35] HypergeometricFunctions v0.3.28
  [842dd82b] InlineStrings v1.4.4
  [18e54dd8] IntegerMathUtils v0.1.3
  [3587e190] InverseFunctions v0.1.17
  [41ab1584] InvertedIndices v1.3.1
  [92d709cd] IrrationalConstants v0.2.4
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.7.1
  [682c06a0] JSON v0.21.4
  [b964fa9f] LaTeXStrings v1.4.0
  [2ab3a3ac] LogExpFunctions v0.3.29
  [1914dd2f] MacroTools v0.5.16
  [e1d29d7a] Missings v1.2.0
  [37188c8d] MvNormalCDF v0.3.2
  [77ba4419] NaNMath v1.1.3
  [b8a86587] NearestNeighbors v0.4.22
  [bac558e1] OrderedCollections v1.8.1
  [90014a1f] PDMats v0.11.35
  [69de0a69] Parsers v2.8.3
  [2dfb63ee] PooledArrays v1.4.3
  [aea7be01] PrecompileTools v1.3.2
  [21216c6a] Preferences v1.5.0
  [08abe8d2] PrettyTables v2.4.0
  [27ebfcd6] Primes v0.5.7
  [43287f4e] PtrArrays v1.3.0
  [1fd47b50] QuadGK v2.11.2
⌅ [6f49c342] RCall v0.13.18
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.1
  [79098fc4] Rmath v0.8.0
  [f2b01f46] Roots v2.2.8
  [91c51154] SentinelArrays v1.4.8
  [1277b4bf] ShiftedArrays v2.0.0
  [a2af1166] SortingAlgorithms v1.2.2
  [276daf66] SpecialFunctions v2.5.1
  [3179d415] SplitClusterTest v0.1.0
  [90137ffa] StaticArrays v1.9.14
  [1e83bf80] StaticArraysCore v1.4.3
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.7.1
  [2913bbd2] StatsBase v0.34.6
  [4c63d2b9] StatsFuns v1.5.0
  [3eaba693] StatsModels v0.7.5
  [892a3eda] StringManipulation v0.4.1
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.1
⌅ [6aa5eb33] TaylorSeries v0.18.5
  [81def892] VersionParsing v1.3.0
⌅ [48feb556] WilliamsonTransforms v0.1.7
  [1b915085] WinReg v1.0.0
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [f50d1b31] Rmath_jll v0.5.1+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [f43a241f] Downloads v1.7.0
  [7b1f6079] FileWatching v1.11.0
  [9fa8497b] Future v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [b27032c2] LibCURL v0.6.4
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.13.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [de0858da] Printf v1.11.0
  [3fa0cd96] REPL v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [f489334b] StyledStrings v1.11.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] LibCURL_jll v8.15.0+1
  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2025.7.15
  [4536629a] OpenBLAS_jll v0.3.29+0
  [05823500] OpenLibm_jll v0.8.5+0
  [458c3c95] OpenSSL_jll v3.5.2+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [83775a58] Zlib_jll v1.3.1+2
  [3161d3a3] Zstd_jll v1.5.7+1
  [8e850b90] libblastrampoline_jll v5.13.1+0
  [8e850ede] nghttp2_jll v1.65.0+0
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading.
     Testing Running tests...

iid Gaussian case: Error During Test at /home/pkgeval/.julia/packages/SplitClusterTest/PXBDa/test/runtests.jl:10
  Got exception outside of a @test
  could not load symbol "SET_SYMVALUE":
  /home/pkgeval/.julia/conda/3/x86_64/lib/R/lib/libR.so: undefined symbol: SET_SYMVALUE
  Stacktrace:
    [1] set_last_value(s::Ptr{RCall.EnvSxp})
      @ RCall ~/.julia/packages/RCall/gOwEW/src/methods.jl:588
    [2] reval_p(expr::Ptr{RCall.ExprSxp}, env::Ptr{RCall.EnvSxp})
      @ RCall ~/.julia/packages/RCall/gOwEW/src/eval.jl:126
    [3] reval_p(expr::Ptr{RCall.ExprSxp})
      @ RCall ~/.julia/packages/RCall/gOwEW/src/eval.jl:99
    [4] macro expansion
      @ ~/.julia/packages/RCall/gOwEW/src/macros.jl:66 [inlined]
    [5] cl_rkmeans(x::Matrix{Float64}; kw::@Kwargs{})
      @ SplitClusterTest ~/.julia/packages/SplitClusterTest/PXBDa/src/ds.jl:89
    [6] cl_rkmeans
      @ ~/.julia/packages/SplitClusterTest/PXBDa/src/ds.jl:89 [inlined]
    [7] ds(x::Matrix{Float64}; q::Float64, signal_measure::String, ret_ms::Bool, type::String, cl_method::typeof(SplitClusterTest.cl_rkmeans), ti_method::typeof(SplitClusterTest.ti_pca), oracle_label::Nothing, kmeans_whiten::Bool, Σ::Nothing)
      @ SplitClusterTest ~/.julia/packages/SplitClusterTest/PXBDa/src/ds.jl:143
    [8] kwcall(::@NamedTuple{q::Float64, ret_ms::Bool}, ::typeof(ds), x::Matrix{Float64})
      @ SplitClusterTest ~/.julia/packages/SplitClusterTest/PXBDa/src/ds.jl:114
    [9] top-level scope
      @ ~/.julia/packages/SplitClusterTest/PXBDa/test/runtests.jl:11
   [10] macro expansion
      @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined]
   [11] macro expansion
      @ ~/.julia/packages/SplitClusterTest/PXBDa/test/runtests.jl:12 [inlined]
   [12] include(mapexpr::Function, mod::Module, _path::String)
      @ Base ./Base.jl:309
   [13] top-level scope
      @ none:6
   [14] eval(m::Module, e::Any)
      @ Core ./boot.jl:489
   [15] exec_options(opts::Base.JLOptions)
      @ Base ./client.jl:296
   [16] _start()
      @ Base ./client.jl:563
Test Summary:     | Error  Total   Time
iid Gaussian case |     1      1  26.8s
RNG of the outermost testset: Random.Xoshiro(0x2baa843a68645bbf, 0xb74c1ebc9976d19c, 0xe6ed56b5c249ae20, 0xcc1021dc67121561, 0x68a27f03d1b7ccda)
ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/SplitClusterTest/PXBDa/test/runtests.jl:10

Testing failed after 60.05s

ERROR: LoadError: Package SplitClusterTest errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2672
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2521 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:538
  [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:515
  [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:168
  [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:157
  [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156
  [9] test
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [inlined]
 [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String)
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155
 [11] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:219
 [12] include(mod::Module, _path::String)
    @ Base ./Base.jl:308
 [13] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:330
 [14] _start()
    @ Base ./client.jl:563
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 345.19s: package tests unexpectedly errored