Package evaluation of GeoClustering on Julia 1.13.0-DEV.985 (9c94e7ae32*) started at 2025-08-15T02:23:01.698 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.46s ################################################################################ # Installation # Installing GeoClustering... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [7472b188] + GeoClustering v0.5.2 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.17.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 ⌅ [ec485272] + ArnoldiMethod v0.2.0 [4fba245c] + ArrayInterface v7.19.0 [39de3d68] + AxisArrays v0.4.7 [198e06fe] + BangBang v0.4.4 [9718e550] + Baselet v0.1.1 [0e736298] + Bessels v0.2.8 ⌅ [324d7699] + CategoricalArrays v0.10.8 [d360d2e6] + ChainRulesCore v1.26.0 [7a955b69] + CircularArrays v1.4.0 [aaaa29a8] + Clustering v0.15.8 [5900dafe] + CoDa v1.5.0 [3da002f7] + ColorTypes v0.12.1 ⌅ [9cc86067] + ColumnSelectors v0.1.1 [861a8166] + Combinatorics v1.0.3 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.18.0 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 ⌅ [6cb2f572] + DataScienceTraits v0.1.0 [864edb3b] + DataStructures v0.19.0 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [ab46fb84] + DensityRatioEstimation v1.3.1 [85a47980] + Dictionaries v0.4.5 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.4 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.28.0 [53c48c17] + FixedPointNumbers v0.8.5 [f6369f11] + ForwardDiff v1.0.1 [46192b85] + GPUArraysCore v0.2.0 [7472b188] + GeoClustering v0.5.2 ⌅ [323cb8eb] + GeoStatsBase v0.35.3 ⌃ [e502b557] + GeoTables v1.9.1 [34004b35] + HypergeometricFunctions v0.3.28 [313cdc1a] + Indexing v1.1.1 [22cec73e] + InitialValues v0.3.1 [8197267c] + IntervalSets v0.7.11 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [b964fa9f] + LaTeXStrings v1.4.0 [d3d80556] + LineSearches v7.4.0 [2ab3a3ac] + LogExpFunctions v0.3.29 ⌅ [30fc2ffe] + LossFunctions v0.11.2 [e80e1ace] + MLJModelInterface v1.12.0 [1914dd2f] + MacroTools v0.5.16 ⌅ [eacbb407] + Meshes v0.35.21 [128add7d] + MicroCollections v0.2.0 [e1d29d7a] + Missings v1.2.0 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [b8a86587] + NearestNeighbors v0.4.22 [2f6b4ddb] + NelderMead v0.4.0 [6fe1bfb0] + OffsetArrays v1.17.0 [429524aa] + Optim v1.13.2 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [d96e819e] + Parameters v0.12.3 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.5.0 [08abe8d2] + PrettyTables v2.4.0 [92933f4c] + ProgressMeter v1.10.4 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [94ee1d12] + Quaternions v0.7.6 [b3c3ace0] + RangeArrays v0.3.2 [c1ae055f] + RealDot v0.1.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [6038ab10] + Rotations v1.7.1 [321657f4] + ScientificTypes v3.1.1 [30f210dd] + ScientificTypesBase v3.0.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.5.1 [03a91e81] + SplitApplyCombine v1.2.3 [171d559e] + SplittablesBase v0.1.15 [90137ffa] + StaticArrays v1.9.14 [1e83bf80] + StaticArraysCore v1.4.3 [64bff920] + StatisticalTraits v3.5.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.6 [4c63d2b9] + StatsFuns v1.5.0 [88034a9c] + StringDistances v0.11.3 [892a3eda] + StringManipulation v0.4.1 ⌅ [e5d66e97] + TableDistances v0.2.1 [3783bdb8] + TableTraits v1.0.1 ⌃ [0d432bfd] + TableTransforms v1.21.0 [bd369af6] + Tables v1.12.1 [28d57a85] + Transducers v0.4.84 [28dd2a49] + TransformsBase v1.6.0 [9d95f2ec] + TypedTables v1.4.6 [3a884ed6] + UnPack v1.0.2 [1986cc42] + Unitful v1.24.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.13.1+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 5.92s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... ERROR: LoadError: The following 1 direct dependency failed to precompile: BetaML Failed to precompile BetaML [024491cd-cc6b-443e-8034-08ea7eb7db2b] to "/home/pkgeval/.julia/compiled/v1.13/BetaML/jl_FN2gEb" (ProcessExited(1)). ERROR: LoadError: UndefVarError: `StaticData` not defined in `Base` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] getproperty @ ./Base_compiler.jl:50 [inlined] [2] recompile_invalidations(__module__::Module, expr::Any) @ PrecompileTools ~/.julia/packages/PrecompileTools/Z8SWe/src/invalidations.jl:17 [3] top-level scope @ ~/.julia/packages/Static/SeEGr/src/Static.jl:10 [4] include(mod::Module, _path::String) @ Base ./Base.jl:308 [5] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3017 [6] top-level scope @ stdin:5 [7] eval(m::Module, e::Any) @ Core ./boot.jl:489 [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2863 [9] include_string @ ./loading.jl:2873 [inlined] [10] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [11] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Static/SeEGr/src/Static.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Static [aedffcd0-7271-4cad-89d0-dc628f76c6d3] to "/home/pkgeval/.julia/compiled/v1.13/Static/jl_kFLKAC" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3304 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3182 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2669 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#233 @ ./reflection.jl:1333 [inlined] [9] invokelatest_gr @ ./reflection.jl:1325 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3875 [11] maybe_cachefile_lock @ ./loading.jl:3872 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2655 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2484 [14] macro expansion @ ./loading.jl:2412 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2376 [17] require @ ./loading.jl:2352 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [20] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr}) @ Base ./module.jl:101 [21] top-level scope @ ~/.julia/packages/LoopVectorization/ImqiY/src/LoopVectorization.jl:31 [22] include(mod::Module, _path::String) @ Base ./Base.jl:308 [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3017 [24] top-level scope @ stdin:5 [25] eval(m::Module, e::Any) @ Core ./boot.jl:489 [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2863 [27] include_string @ ./loading.jl:2873 [inlined] [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [29] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/LoopVectorization/ImqiY/src/LoopVectorization.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile LoopVectorization [bdcacae8-1622-11e9-2a5c-532679323890] to "/home/pkgeval/.julia/compiled/v1.13/LoopVectorization/jl_r9uaC9" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3304 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3182 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2669 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#233 @ ./reflection.jl:1333 [inlined] [9] invokelatest_gr @ ./reflection.jl:1325 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3875 [11] maybe_cachefile_lock @ ./loading.jl:3872 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2655 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2484 [14] macro expansion @ ./loading.jl:2412 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2376 [17] require @ ./loading.jl:2352 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [20] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [21] top-level scope @ ~/.julia/packages/BetaML/3Lb3h/src/Utils/Utils.jl:38 [22] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:309 [23] top-level scope @ ~/.julia/packages/BetaML/3Lb3h/src/BetaML.jl:24 [24] include(mod::Module, _path::String) @ Base ./Base.jl:308 [25] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3017 [26] top-level scope @ stdin:5 [27] eval(m::Module, e::Any) @ Core ./boot.jl:489 [28] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2863 [29] include_string @ ./loading.jl:2873 [inlined] [30] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [31] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/BetaML/3Lb3h/src/Utils/Utils.jl:3 in expression starting at /home/pkgeval/.julia/packages/BetaML/3Lb3h/src/BetaML.jl:1 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 264.71s ################################################################################ # Testing # Testing GeoClustering Status `/tmp/jl_MgZeCG/Project.toml` [024491cd] BetaML v0.12.2 ⌅ [324d7699] CategoricalArrays v0.10.8 [7472b188] GeoClustering v0.5.2 ⌅ [323cb8eb] GeoStatsBase v0.35.3 ⌃ [e502b557] GeoTables v1.9.1 [add582a8] MLJ v0.20.9 [d354fa79] MLJClusteringInterface v0.1.13 ⌅ [eacbb407] Meshes v0.35.21 ⌅ [e5d66e97] TableDistances v0.2.1 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_MgZeCG/Manifest.toml` [47edcb42] ADTypes v1.17.0 [da404889] ARFFFiles v1.5.0 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 ⌅ [ec485272] ArnoldiMethod v0.2.0 [4fba245c] ArrayInterface v7.19.0 [a9b6321e] Atomix v1.1.2 [39de3d68] AxisArrays v0.4.7 [198e06fe] BangBang v0.4.4 [9718e550] Baselet v0.1.1 [0e736298] Bessels v0.2.8 [024491cd] BetaML v0.12.2 [d1d4a3ce] BitFlags v0.1.9 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [2a0fbf3d] CPUSummary v0.2.7 ⌅ [324d7699] CategoricalArrays v0.10.8 [af321ab8] CategoricalDistributions v0.1.15 [082447d4] ChainRules v1.72.5 [d360d2e6] ChainRulesCore v1.26.0 [7a955b69] CircularArrays v1.4.0 [fb6a15b2] CloseOpenIntervals v0.1.13 [aaaa29a8] Clustering v0.15.8 [5900dafe] CoDa v1.5.0 [944b1d66] CodecZlib v0.7.8 [3da002f7] ColorTypes v0.12.1 ⌅ [9cc86067] ColumnSelectors v0.1.1 [861a8166] Combinatorics v1.0.3 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.0 [a33af91c] CompositionsBase v0.1.2 [ed09eef8] ComputationalResources v0.3.2 [f0e56b4a] ConcurrentUtilities v2.5.0 [187b0558] ConstructionBase v1.6.0 [6add18c4] ContextVariablesX v0.1.3 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 ⌅ [6cb2f572] DataScienceTraits v0.1.0 [864edb3b] DataStructures v0.19.0 [e2d170a0] DataValueInterfaces v1.0.0 [244e2a9f] DefineSingletons v0.1.2 [8bb1440f] DelimitedFiles v1.9.1 [ab46fb84] DensityRatioEstimation v1.3.1 [85a47980] Dictionaries v0.4.5 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.4 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.5 [792122b4] EarlyStopping v0.3.0 [4e289a0a] EnumX v1.0.5 [460bff9d] ExceptionUnwrapping v0.1.11 [cc61a311] FLoops v0.2.2 [b9860ae5] FLoopsBase v0.1.1 [33837fe5] FeatureSelection v0.2.3 [5789e2e9] FileIO v1.17.0 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.13.0 [6a86dc24] FiniteDiff v2.28.0 [53c48c17] FixedPointNumbers v0.8.5 [9dda63f9] ForceImport v0.0.3 [f6369f11] ForwardDiff v1.0.1 [46192b85] GPUArraysCore v0.2.0 [7472b188] GeoClustering v0.5.2 ⌅ [323cb8eb] GeoStatsBase v0.35.3 ⌃ [e502b557] GeoTables v1.9.1 [cd3eb016] HTTP v1.10.17 [076d061b] HashArrayMappedTries v0.2.0 [3e5b6fbb] HostCPUFeatures v0.1.17 [34004b35] HypergeometricFunctions v0.3.28 [7869d1d1] IRTools v0.4.15 [615f187c] IfElse v0.1.1 [313cdc1a] Indexing v1.1.1 [22cec73e] InitialValues v0.3.1 [8197267c] IntervalSets v0.7.11 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.4 [c8e1da08] IterTools v1.10.0 [b3c1a2ee] IterationControl v0.5.4 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.5.15 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v0.21.4 [b14d175d] JuliaVariables v0.2.4 [63c18a36] KernelAbstractions v0.9.38 [b964fa9f] LaTeXStrings v1.4.0 [a5e1c1ea] LatinHypercubeSampling v1.9.0 [10f19ff3] LayoutPointers v0.1.17 [92ad9a40] LearnAPI v1.0.1 [d3d80556] LineSearches v7.4.0 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.1.0 [bdcacae8] LoopVectorization v0.12.172 ⌅ [30fc2ffe] LossFunctions v0.11.2 [c2834f40] MLCore v1.0.0 ⌅ [64a0f543] MLFlowClient v0.5.1 [add582a8] MLJ v0.20.9 [45f359ea] MLJBalancing v0.1.5 [a7f614a8] MLJBase v1.8.2 [d354fa79] MLJClusteringInterface v0.1.13 [50ed68f4] MLJEnsembles v0.4.3 [7b7b8358] MLJFlow v0.5.0 [614be32b] MLJIteration v0.6.3 [e80e1ace] MLJModelInterface v1.12.0 [d491faf4] MLJModels v0.17.9 [03970b2e] MLJTuning v0.8.8 [d8e11817] MLStyle v0.4.17 [f1d291b0] MLUtils v0.4.8 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [739be429] MbedTLS v1.1.9 ⌅ [eacbb407] Meshes v0.35.21 [128add7d] MicroCollections v0.2.0 [e1d29d7a] Missings v1.2.0 [d41bc354] NLSolversBase v7.10.0 [872c559c] NNlib v0.9.31 [77ba4419] NaNMath v1.1.3 [71a1bf82] NameResolution v0.1.5 [b8a86587] NearestNeighbors v0.4.22 [2f6b4ddb] NelderMead v0.4.0 [6fe1bfb0] OffsetArrays v1.17.0 [8b6db2d4] OpenML v0.3.2 [4d8831e6] OpenSSL v1.5.0 [429524aa] Optim v1.13.2 [bac558e1] 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[a2af1166] SortingAlgorithms v1.2.2 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.5.1 [03a91e81] SplitApplyCombine v1.2.3 [171d559e] SplittablesBase v0.1.15 [860ef19b] StableRNGs v1.0.3 [aedffcd0] Static v1.2.0 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.14 [1e83bf80] StaticArraysCore v1.4.3 [a19d573c] StatisticalMeasures v0.2.1 [c062fc1d] StatisticalMeasuresBase v0.1.3 [64bff920] StatisticalTraits v3.5.0 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.6 [4c63d2b9] StatsFuns v1.5.0 [88034a9c] StringDistances v0.11.3 [892a3eda] StringManipulation v0.4.1 [09ab397b] StructArrays v0.7.1 ⌅ [e5d66e97] TableDistances v0.2.1 [3783bdb8] TableTraits v1.0.1 ⌃ [0d432bfd] TableTransforms v1.21.0 [bd369af6] Tables v1.12.1 [8290d209] ThreadingUtilities v0.5.5 [3bb67fe8] TranscodingStreams v0.11.3 [28d57a85] Transducers v0.4.84 [28dd2a49] TransformsBase v1.6.0 [9d95f2ec] TypedTables v1.4.6 [5c2747f8] URIs v1.6.1 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SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.7.15 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.2+0 [efcefdf7] PCRE2_jll v10.45.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling packages... 13959.2 ms ? GeoStatsBase Info Given GeoClustering was explicitly requested, output will be shown live  WARNING: Imported binding TableTransforms.ColSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.Col was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.AllSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.NoneSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.colspec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.choose was undeclared at import time during import to GeoStatsBase. WARNING: Method definition partitioninds(Random.AbstractRNG, GeoTables.AbstractGeoTable, Meshes.PartitionMethod) in module GeoTables at /home/pkgeval/.julia/packages/GeoTables/pM3bS/src/indices.jl:5 overwritten in module GeoStatsBase at /home/pkgeval/.julia/packages/GeoStatsBase/McgmE/src/geotables.jl:5. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 19631.2 ms ? GeoClustering WARNING: Imported binding TableTransforms.ColSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.Col was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.AllSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.NoneSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.colspec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.choose was undeclared at import time during import to GeoStatsBase. WARNING: Method definition partitioninds(Random.AbstractRNG, GeoTables.AbstractGeoTable, Meshes.PartitionMethod) in module GeoTables at /home/pkgeval/.julia/packages/GeoTables/pM3bS/src/indices.jl:5 overwritten in module GeoStatsBase at /home/pkgeval/.julia/packages/GeoStatsBase/McgmE/src/geotables.jl:5. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. Precompiling packages... Info Given GeoStatsBase was explicitly requested, output will be shown live  WARNING: Imported binding TableTransforms.ColSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.Col was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.AllSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.NoneSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.colspec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.choose was undeclared at import time during import to GeoStatsBase. WARNING: Method definition partitioninds(Random.AbstractRNG, GeoTables.AbstractGeoTable, Meshes.PartitionMethod) in module GeoTables at /home/pkgeval/.julia/packages/GeoTables/pM3bS/src/indices.jl:5 overwritten in module GeoStatsBase at /home/pkgeval/.julia/packages/GeoStatsBase/McgmE/src/geotables.jl:5. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 12197.5 ms ? GeoStatsBase WARNING: Imported binding TableTransforms.ColSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.Col was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.AllSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.NoneSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.colspec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.choose was undeclared at import time during import to GeoStatsBase. WARNING: Method definition partitioninds(Random.AbstractRNG, GeoTables.AbstractGeoTable, Meshes.PartitionMethod) in module GeoTables at /home/pkgeval/.julia/packages/GeoTables/pM3bS/src/indices.jl:5 overwritten in module GeoStatsBase at /home/pkgeval/.julia/packages/GeoStatsBase/McgmE/src/geotables.jl:5. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. WARNING: Imported binding TableTransforms.ColSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.Col was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.AllSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.NoneSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.colspec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.choose was undeclared at import time during import to GeoStatsBase. WARNING: Method definition partitioninds(Random.AbstractRNG, GeoTables.AbstractGeoTable, Meshes.PartitionMethod) in module GeoTables at /home/pkgeval/.julia/packages/GeoTables/pM3bS/src/indices.jl:5 overwritten in module GeoStatsBase at /home/pkgeval/.julia/packages/GeoStatsBase/McgmE/src/geotables.jl:5. WARNING: Method definition sampleinds(Random.AbstractRNG, GeoTables.AbstractGeoTable, Meshes.DiscreteSamplingMethod) in module GeoTables at /home/pkgeval/.julia/packages/GeoTables/pM3bS/src/indices.jl:8 overwritten in module GeoStatsBase at /home/pkgeval/.julia/packages/GeoStatsBase/McgmE/src/geotables.jl:8. WARNING: Method definition sortinds(GeoTables.AbstractGeoTable, Meshes.SortingMethod) in module GeoTables at /home/pkgeval/.julia/packages/GeoTables/pM3bS/src/indices.jl:11 overwritten in module GeoStatsBase at /home/pkgeval/.julia/packages/GeoStatsBase/McgmE/src/geotables.jl:11. ERROR: LoadError: UndefVarError: `ColSpec` not defined in `GeoStatsBase` Suggestion: this global was defined as `TableTransforms.ColSpec` but not assigned a value. Stacktrace: [1] top-level scope @ ~/.julia/packages/GeoStatsBase/McgmE/src/geoops/describe.jl:4 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:309 [3] top-level scope @ ~/.julia/packages/GeoStatsBase/McgmE/src/geoops.jl:6 [4] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:309 [5] top-level scope @ ~/.julia/packages/GeoStatsBase/McgmE/src/GeoStatsBase.jl:54 [6] include(mod::Module, _path::String) @ Base ./Base.jl:308 [7] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2708 [8] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2484 [9] macro expansion @ ./loading.jl:2412 [inlined] [10] macro expansion @ ./lock.jl:376 [inlined] [11] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2376 [12] require @ ./loading.jl:2352 [inlined] [13] eval_import_path @ ./module.jl:36 [inlined] [14] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [15] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [16] top-level scope @ ~/.julia/packages/GeoClustering/7vdqA/src/GeoClustering.jl:9 [17] include(mod::Module, _path::String) @ Base ./Base.jl:308 [18] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2708 [19] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2484 [20] macro expansion @ ./loading.jl:2412 [inlined] [21] macro expansion @ ./lock.jl:376 [inlined] [22] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2376 [23] require @ ./loading.jl:2352 [inlined] [24] eval_import_path @ ./module.jl:36 [inlined] [25] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [26] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [27] top-level scope @ ~/.julia/packages/GeoClustering/7vdqA/test/runtests.jl:1 [28] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:309 [29] top-level scope @ none:6 [30] eval(m::Module, e::Any) @ Core ./boot.jl:489 [31] exec_options(opts::Base.JLOptions) @ Base ./client.jl:296 [32] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/GeoStatsBase/McgmE/src/geoops/describe.jl:4 in expression starting at /home/pkgeval/.julia/packages/GeoStatsBase/McgmE/src/geoops.jl:6 in expression starting at /home/pkgeval/.julia/packages/GeoStatsBase/McgmE/src/GeoStatsBase.jl:5 in expression starting at /home/pkgeval/.julia/packages/GeoClustering/7vdqA/src/GeoClustering.jl:5 in expression starting at /home/pkgeval/.julia/packages/GeoClustering/7vdqA/test/runtests.jl:1 Testing failed after 123.3s ERROR: LoadError: Package GeoClustering errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2672 [3] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2521 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:538 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:515 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:168 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:157 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [9] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:308 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:330 [14] _start() @ Base ./client.jl:563 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 448.06s: illegal method overwrites during precompilation