Package evaluation of DiffEqParamEstim on Julia 1.13.0-DEV.985 (9c94e7ae32*) started at 2025-08-14T22:58:50.242 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.94s ################################################################################ # Installation # Installing DiffEqParamEstim... Resolving package versions... Installed Rmath_jll ──────────────────────── v0.5.1+0 Installed CommonWorldInvalidations ───────── v1.0.0 Installed CompositionsBase ───────────────── v0.1.2 Installed ManualMemory ───────────────────── v0.1.8 Installed Dierckx ────────────────────────── v0.5.4 Installed DataStructures ─────────────────── v0.19.0 Installed MacroTools ─────────────────────── v0.5.16 Installed CommonSolve ────────────────────── v0.2.4 Installed Calculus ───────────────────────── v0.5.2 Installed RuntimeGeneratedFunctions ──────── v0.5.15 Installed FastPower ──────────────────────── v1.1.3 Installed FillArrays ─────────────────────── v1.13.0 Installed HypergeometricFunctions ────────── v0.3.28 Installed ConstructionBase ───────────────── v1.6.0 Installed Adapt ──────────────────────────── v4.3.0 Installed BitTwiddlingConvenienceFunctions ─ v0.1.6 Installed ExprTools ──────────────────────── v0.1.10 Installed SIMDTypes ──────────────────────── v0.1.0 Installed AliasTables ────────────────────── v1.1.3 Installed ArrayInterface ─────────────────── v7.19.0 Installed StatsBase ──────────────────────── v0.34.6 Installed OrderedCollections ─────────────── v1.8.1 Installed SymbolicIndexingInterface ──────── v0.3.43 Installed IteratorInterfaceExtensions ────── v1.0.0 Installed Compat ─────────────────────────── v4.18.0 Installed FunctionWrappersWrappers ───────── v0.1.3 Installed StrideArraysCore ───────────────── v0.5.7 Installed RecipesBase ────────────────────── v1.3.4 Installed DataAPI ────────────────────────── v1.16.0 Installed PreallocationTools ─────────────── v0.4.31 Installed SciMLOperators ─────────────────── v1.5.0 Installed EnzymeCore ─────────────────────── v0.8.12 Installed CpuId ──────────────────────────── v0.3.1 Installed StatsAPI ───────────────────────── v1.7.1 Installed Statistics ─────────────────────── v1.11.1 Installed SciMLStructures ────────────────── v1.7.0 Installed ExproniconLite ─────────────────── v0.10.14 Installed PrecompileTools ────────────────── v1.3.2 Installed GPUArraysCore ──────────────────── v0.2.0 Installed IrrationalConstants ────────────── v0.2.4 Installed ConcreteStructs ────────────────── v0.2.3 Installed LayoutPointers ─────────────────── v0.1.17 Installed TruncatedStacktraces ───────────── v1.4.0 Installed StaticArrayInterface ───────────── v1.8.0 Installed PenaltyFunctions ───────────────── v0.3.0 Installed OpenSpecFun_jll ────────────────── v0.5.6+0 Installed FunctionWrappers ───────────────── v1.1.3 Installed CPUSummary ─────────────────────── v0.2.7 Installed Requires ───────────────────────── v1.3.1 Installed QuadGK ─────────────────────────── v2.11.2 Installed LogExpFunctions ────────────────── v0.3.29 Installed StaticArraysCore ───────────────── v1.4.3 Installed Distributions ──────────────────── v0.25.120 Installed Rmath ──────────────────────────── v0.8.0 Installed FastBroadcast ──────────────────── v0.3.5 Installed FastClosures ───────────────────── v0.3.2 Installed Parameters ─────────────────────── v0.12.3 Installed IfElse ─────────────────────────── v0.1.1 Installed CloseOpenIntervals ─────────────── v0.1.13 Installed Dierckx_jll ────────────────────── v0.2.0+0 Installed SciMLBase ──────────────────────── v2.110.0 Installed Polyester ──────────────────────── v0.7.18 Installed StatsFuns ──────────────────────── v1.5.0 Installed MuladdMacro ────────────────────── v0.2.4 Installed PtrArrays ──────────────────────── v1.3.0 Installed EnumX ──────────────────────────── v1.0.5 Installed DiffEqBase ─────────────────────── v6.183.0 Installed SpecialFunctions ───────────────── v2.5.1 Installed InverseFunctions ───────────────── v0.1.17 Installed Reexport ───────────────────────── v1.2.2 Installed Missings ───────────────────────── v1.2.0 Installed Static ─────────────────────────── v1.2.0 Installed Jieko ──────────────────────────── v0.2.1 Installed Setfield ───────────────────────── v1.1.2 Installed Preferences ────────────────────── v1.5.0 Installed PDMats ─────────────────────────── v0.11.35 Installed PolyesterWeave ─────────────────── v0.2.2 Installed ThreadingUtilities ─────────────── v0.5.5 Installed JLLWrappers ────────────────────── v1.7.1 Installed RecursiveArrayTools ────────────── v3.37.0 Installed SortingAlgorithms ──────────────── v1.2.2 Installed Moshi ──────────────────────────── v0.3.7 Installed UnPack ─────────────────────────── v1.0.2 Installed ADTypes ────────────────────────── v1.17.0 Installed Accessors ──────────────────────── v0.1.42 Installed DiffEqParamEstim ───────────────── v2.2.0 Installed DocStringExtensions ────────────── v0.9.5 Installing 3 artifacts Installed artifact Rmath 121.9 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact Dierckx 149.2 KiB Updating `~/.julia/environments/v1.13/Project.toml` [1130ab10] + DiffEqParamEstim v2.2.0 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.17.0 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.19.0 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [2a0fbf3d] + CPUSummary v0.2.7 [49dc2e85] + Calculus v0.5.2 [fb6a15b2] + CloseOpenIntervals v0.1.13 [38540f10] + CommonSolve v0.2.4 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.0 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [187b0558] + ConstructionBase v1.6.0 [adafc99b] + CpuId v0.3.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.0 [39dd38d3] + Dierckx v0.5.4 [2b5f629d] + DiffEqBase v6.183.0 [1130ab10] + DiffEqParamEstim v2.2.0 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [f151be2c] + EnzymeCore v0.8.12 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [7034ab61] + FastBroadcast v0.3.5 [9aa1b823] + FastClosures v0.3.2 [a4df4552] + FastPower v1.1.3 [1a297f60] + FillArrays v1.13.0 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [46192b85] + GPUArraysCore v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [ae98c720] + Jieko v0.2.1 [10f19ff3] + LayoutPointers v0.1.17 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [e1d29d7a] + Missings v1.2.0 [2e0e35c7] + Moshi v0.3.7 [46d2c3a1] + MuladdMacro v0.2.4 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [d96e819e] + Parameters v0.12.3 [06bb1623] + PenaltyFunctions v0.3.0 [f517fe37] + Polyester v0.7.18 [1d0040c9] + PolyesterWeave v0.2.2 [d236fae5] + PreallocationTools v0.4.31 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.5.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.37.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [7e49a35a] + RuntimeGeneratedFunctions v0.5.15 [94e857df] + SIMDTypes v0.1.0 [0bca4576] + SciMLBase v2.110.0 [c0aeaf25] + SciMLOperators v1.5.0 [53ae85a6] + SciMLStructures v1.7.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.5.1 [aedffcd0] + Static v1.2.0 [0d7ed370] + StaticArrayInterface v1.8.0 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.6 [4c63d2b9] + StatsFuns v1.5.0 [7792a7ef] + StrideArraysCore v0.5.7 [2efcf032] + SymbolicIndexingInterface v0.3.43 [8290d209] + ThreadingUtilities v0.5.5 [781d530d] + TruncatedStacktraces v1.4.0 [3a884ed6] + UnPack v1.0.2 [cd4c43a9] + Dierckx_jll v0.2.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.13.1+0 Installation completed after 9.63s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4469.6 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:76 Precompiling package dependencies... ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 99 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_73644.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2376 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x0000723f40125d20 Total snapshots: 459. Utilization: 0% ╎459 @Base/task.jl:1129 wait_forever() 458╎ 459 @Base/task.jl:1192 wait() ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_73644.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2376 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007296725f0c40 Total snapshots: 469. Utilization: 0% ╎469 @Base/task.jl:1129 wait_forever() 468╎ 469 @Base/task.jl:1192 wait() [99] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/precompile.jl:37 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_73644.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2376 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) Allocations: 25485047 (Pool: 25483324; Big: 1723); GC: 44 PkgEval terminated after 2741.55s: test duration exceeded the time limit