Package evaluation of CherenkovDeconvolution on Julia 1.13.0-DEV.985 (9c94e7ae32*) started at 2025-08-14T22:56:34.022 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.83s ################################################################################ # Installation # Installing CherenkovDeconvolution... Resolving package versions... Installed Conda ── v1.10.2 Installed PyCall ─ v1.94.1 Updating `~/.julia/environments/v1.13/Project.toml` [7995dc16] + CherenkovDeconvolution v0.3.0 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.17.0 [79e6a3ab] + Adapt v4.3.0 [4fba245c] + ArrayInterface v7.19.0 [7995dc16] + CherenkovDeconvolution v0.3.0 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.18.0 [8f4d0f93] + Conda v1.10.2 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.7.0 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.4 [6e83dbb3] + Discretizers v3.2.4 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.28.0 [f6369f11] + ForwardDiff v1.0.1 [842dd82b] + InlineStrings v1.4.4 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v0.21.4 [b964fa9f] + LaTeXStrings v1.4.0 [d3d80556] + LineSearches v7.4.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [d8a4904e] + MutableArithmetics v1.6.4 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [429524aa] + Optim v1.13.2 [bac558e1] + OrderedCollections v1.8.1 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 ⌅ [f27b6e38] + Polynomials v3.1.8 [2dfb63ee] + PooledArrays v1.4.3 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.5.0 [08abe8d2] + PrettyTables v2.4.0 ⌅ [438e738f] + PyCall v1.94.1 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 ⌅ [3646fa90] + ScikitLearn v0.6.6 [6e75b9c4] + ScikitLearnBase v0.5.0 [91c51154] + SentinelArrays v1.4.8 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.5.1 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 ⌅ [2913bbd2] + StatsBase v0.33.21 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [3a884ed6] + UnPack v1.0.2 [81def892] + VersionParsing v1.3.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+1 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.7.15 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.5.2+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.65.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building Conda ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b19db3927f0db4151cb86d073689f2428e524576/build.log` Building PyCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/53b8b07b721b77144a0fbbbc2675222ebf40a02d/build.log` Installation completed after 57.92s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... ERROR: LoadError: The following 3 direct dependencies failed to precompile: PyCall Failed to precompile PyCall [438e738f-606a-5dbb-bf0a-cddfbfd45ab0] to "/home/pkgeval/.julia/compiled/v1.13/PyCall/jl_wKetSX" (ProcessExited(1)). ERROR: LoadError: ArgumentError: Source type for `reinterpret` must be isbits Stacktrace: [1] _reinterpret @ ./reinterpretarray.jl:872 [inlined] [2] reinterpret @ ./essentials.jl:783 [inlined] [3] _preserveas!(dest::Vector{UInt8}, ::Type{Cwstring}, x::String) @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:67 [4] Py_SetPythonHome(libpy::Ptr{Nothing}, pyversion::VersionNumber, PYTHONHOME::String) @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:36 [5] top-level scope @ ~/.julia/packages/PyCall/ygXW2/src/startup.jl:57 [6] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:309 [7] top-level scope @ ~/.julia/packages/PyCall/ygXW2/src/PyCall.jl:38 [8] include(mod::Module, _path::String) @ Base ./Base.jl:308 [9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3017 [10] top-level scope @ stdin:5 [11] eval(m::Module, e::Any) @ Core ./boot.jl:489 [12] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2863 [13] include_string @ ./loading.jl:2873 [inlined] [14] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [15] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/startup.jl:41 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/PyCall.jl:1 in expression starting at stdin:5 CherenkovDeconvolution Failed to precompile CherenkovDeconvolution [7995dc16-b5cc-11e8-32a0-21341f07e0b5] to "/home/pkgeval/.julia/compiled/v1.13/CherenkovDeconvolution/jl_LxNWE9" (ProcessExited(1)). WARNING: Constructor for type "Symbol" was extended in `Polynomials` without explicit qualification or import. NOTE: Assumed "Symbol" refers to `Base.Symbol`. This behavior is deprecated and may differ in future versions. NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Symbol end`. Hint: To silence the warning, qualify `Symbol` as `Base.Symbol` in the method signature or explicitly `import Base: Symbol`. ERROR: LoadError: ArgumentError: Source type for `reinterpret` must be isbits Stacktrace: [1] _reinterpret @ ./reinterpretarray.jl:872 [inlined] [2] reinterpret @ ./essentials.jl:783 [inlined] [3] _preserveas!(dest::Vector{UInt8}, ::Type{Cwstring}, x::String) @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:67 [4] Py_SetPythonHome(libpy::Ptr{Nothing}, pyversion::VersionNumber, PYTHONHOME::String) @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:36 [5] top-level scope @ ~/.julia/packages/PyCall/ygXW2/src/startup.jl:57 [6] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:309 [7] top-level scope @ ~/.julia/packages/PyCall/ygXW2/src/PyCall.jl:38 [8] include(mod::Module, _path::String) @ Base ./Base.jl:308 [9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3017 [10] top-level scope @ stdin:5 [11] eval(m::Module, e::Any) @ Core ./boot.jl:489 [12] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2863 [13] include_string @ ./loading.jl:2873 [inlined] [14] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [15] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/startup.jl:41 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/PyCall.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile PyCall [438e738f-606a-5dbb-bf0a-cddfbfd45ab0] to "/home/pkgeval/.julia/compiled/v1.13/PyCall/jl_Ctp5Z5" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3304 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3182 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2669 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#233 @ ./reflection.jl:1333 [inlined] [9] invokelatest_gr @ ./reflection.jl:1325 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3875 [11] maybe_cachefile_lock @ ./loading.jl:3872 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2655 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2484 [14] macro expansion @ ./loading.jl:2412 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2376 [17] require @ ./loading.jl:2352 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [20] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [21] top-level scope @ ~/.julia/packages/ScikitLearn/Wvn7B/src/Skcore.jl:11 [22] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:309 [23] top-level scope @ ~/.julia/packages/ScikitLearn/Wvn7B/src/ScikitLearn.jl:12 [24] include(mod::Module, _path::String) @ Base ./Base.jl:308 [25] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3017 [26] top-level scope @ stdin:5 [27] eval(m::Module, e::Any) @ Core ./boot.jl:489 [28] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2863 [29] include_string @ ./loading.jl:2873 [inlined] [30] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [31] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/ScikitLearn/Wvn7B/src/Skcore.jl:5 in expression starting at /home/pkgeval/.julia/packages/ScikitLearn/Wvn7B/src/ScikitLearn.jl:10 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile ScikitLearn [3646fa90-6ef7-5e7e-9f22-8aca16db6324] to "/home/pkgeval/.julia/compiled/v1.13/ScikitLearn/jl_N1o4KX" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3304 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3182 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2669 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#233 @ ./reflection.jl:1333 [inlined] [9] invokelatest_gr @ ./reflection.jl:1325 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3875 [11] maybe_cachefile_lock @ ./loading.jl:3872 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2655 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2484 [14] macro expansion @ ./loading.jl:2412 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2376 [17] require @ ./loading.jl:2352 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [20] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [21] top-level scope @ ~/.julia/packages/CherenkovDeconvolution/Mui86/src/DeconvUtil.jl:24 [22] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:309 [23] top-level scope @ ~/.julia/packages/CherenkovDeconvolution/Mui86/src/CherenkovDeconvolution.jl:26 [24] include(mod::Module, _path::String) @ Base ./Base.jl:308 [25] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3017 [26] top-level scope @ stdin:5 [27] eval(m::Module, e::Any) @ Core ./boot.jl:489 [28] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2863 [29] include_string @ ./loading.jl:2873 [inlined] [30] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [31] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/CherenkovDeconvolution/Mui86/src/DeconvUtil.jl:22 in expression starting at /home/pkgeval/.julia/packages/CherenkovDeconvolution/Mui86/src/CherenkovDeconvolution.jl:22 in expression starting at stdin:5 ScikitLearn Failed to precompile ScikitLearn [3646fa90-6ef7-5e7e-9f22-8aca16db6324] to "/home/pkgeval/.julia/compiled/v1.13/ScikitLearn/jl_5mZGW7" (ProcessExited(1)). ERROR: LoadError: ArgumentError: Source type for `reinterpret` must be isbits Stacktrace: [1] _reinterpret @ ./reinterpretarray.jl:872 [inlined] [2] reinterpret @ ./essentials.jl:783 [inlined] [3] _preserveas!(dest::Vector{UInt8}, ::Type{Cwstring}, x::String) @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:67 [4] Py_SetPythonHome(libpy::Ptr{Nothing}, pyversion::VersionNumber, PYTHONHOME::String) @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:36 [5] top-level scope @ ~/.julia/packages/PyCall/ygXW2/src/startup.jl:57 [6] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:309 [7] top-level scope @ ~/.julia/packages/PyCall/ygXW2/src/PyCall.jl:38 [8] include(mod::Module, _path::String) @ Base ./Base.jl:308 [9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3017 [10] top-level scope @ stdin:5 [11] eval(m::Module, e::Any) @ Core ./boot.jl:489 [12] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2863 [13] include_string @ ./loading.jl:2873 [inlined] [14] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [15] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/startup.jl:41 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/PyCall.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile PyCall [438e738f-606a-5dbb-bf0a-cddfbfd45ab0] to "/home/pkgeval/.julia/compiled/v1.13/PyCall/jl_Ien8yb" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3304 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3182 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2669 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#233 @ ./reflection.jl:1333 [inlined] [9] invokelatest_gr @ ./reflection.jl:1325 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3875 [11] maybe_cachefile_lock @ ./loading.jl:3872 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2655 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2484 [14] macro expansion @ ./loading.jl:2412 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2376 [17] require @ ./loading.jl:2352 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [20] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [21] top-level scope @ ~/.julia/packages/ScikitLearn/Wvn7B/src/Skcore.jl:11 [22] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:309 [23] top-level scope @ ~/.julia/packages/ScikitLearn/Wvn7B/src/ScikitLearn.jl:12 [24] include(mod::Module, _path::String) @ Base ./Base.jl:308 [25] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3017 [26] top-level scope @ stdin:5 [27] eval(m::Module, e::Any) @ Core ./boot.jl:489 [28] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2863 [29] include_string @ ./loading.jl:2873 [inlined] [30] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [31] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/ScikitLearn/Wvn7B/src/Skcore.jl:5 in expression starting at /home/pkgeval/.julia/packages/ScikitLearn/Wvn7B/src/ScikitLearn.jl:10 in expression starting at stdin:5 in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 61.79s ################################################################################ # Testing # Testing CherenkovDeconvolution Status `/tmp/jl_plH9Xl/Project.toml` [7995dc16] CherenkovDeconvolution v0.3.0 [a93c6f00] DataFrames v1.7.0 [6e83dbb3] Discretizers v3.2.4 [b4f34e82] Distances v0.10.12 [cc2ba9b6] MLDataUtils v0.5.4 [0db19996] NBInclude v2.4.0 [429524aa] Optim v1.13.2 ⌅ [f27b6e38] Polynomials v3.1.8 ⌅ [438e738f] PyCall v1.94.1 ⌅ [3646fa90] ScikitLearn v0.6.6 [6e75b9c4] ScikitLearnBase v0.5.0 [10745b16] Statistics v1.11.1 ⌅ [2913bbd2] StatsBase v0.33.21 [ddb6d928] YAML v0.4.14 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_plH9Xl/Manifest.toml` [47edcb42] ADTypes v1.17.0 [79e6a3ab] Adapt v4.3.0 [4fba245c] ArrayInterface v7.19.0 [7995dc16] CherenkovDeconvolution v0.3.0 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.0 [8f4d0f93] Conda v1.10.2 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.7.0 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.4 [6e83dbb3] Discretizers v3.2.4 [b4f34e82] Distances v0.10.12 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.5 [1a297f60] FillArrays v1.13.0 [6a86dc24] FiniteDiff v2.28.0 [f6369f11] ForwardDiff v1.0.1 [842dd82b] InlineStrings v1.4.4 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.4 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v0.21.4 [b964fa9f] LaTeXStrings v1.4.0 ⌅ [7f8f8fb0] LearnBase v0.3.0 [d3d80556] LineSearches v7.4.0 [2ab3a3ac] LogExpFunctions v0.3.29 ⌃ [9920b226] MLDataPattern v0.5.4 [cc2ba9b6] MLDataUtils v0.5.4 [66a33bbf] MLLabelUtils v0.5.7 [1914dd2f] MacroTools v0.5.16 [dbb5928d] MappedArrays v0.4.2 [e1d29d7a] Missings v1.2.0 [d8a4904e] MutableArithmetics v1.6.4 [0db19996] NBInclude v2.4.0 [d41bc354] NLSolversBase v7.10.0 [77ba4419] NaNMath v1.1.3 [429524aa] Optim v1.13.2 [bac558e1] OrderedCollections v1.8.1 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 ⌅ [f27b6e38] Polynomials v3.1.8 [2dfb63ee] PooledArrays v1.4.3 [85a6dd25] PositiveFactorizations v0.2.4 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.5.0 [08abe8d2] PrettyTables v2.4.0 ⌅ [438e738f] PyCall v1.94.1 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 ⌅ [3646fa90] ScikitLearn v0.6.6 [6e75b9c4] ScikitLearnBase v0.5.0 [91c51154] SentinelArrays v1.4.8 [efcf1570] Setfield v1.1.2 [b85f4697] SoftGlobalScope v1.1.0 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.5.1 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 ⌅ [2913bbd2] StatsBase v0.33.21 [69024149] StringEncodings v0.3.7 [892a3eda] StringManipulation v0.4.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [3a884ed6] UnPack v1.0.2 [81def892] VersionParsing v1.3.0 [ddb6d928] YAML v0.4.14 [94ce4f54] Libiconv_jll v1.18.0+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+1 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.7.15 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.2+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling packages... ✗ PyCall ✗ ScikitLearn Info Given CherenkovDeconvolution was explicitly requested, output will be shown live  ERROR: LoadError: ArgumentError: Source type for `reinterpret` must be isbits Stacktrace:  [1] _reinterpret  @ ./reinterpretarray.jl:872 [inlined]  [2] reinterpret  @ ./essentials.jl:783 [inlined]  [3] _preserveas!(dest::Vector{UInt8}, ::Type{Cwstring}, x::String)  @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:67  [4] Py_SetPythonHome(libpy::Ptr{Nothing}, pyversion::VersionNumber, PYTHONHOME::String)  @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:36  [5] top-level scope  @ ~/.julia/packages/PyCall/ygXW2/src/startup.jl:57  [6] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:309  [7] top-level scope  @ ~/.julia/packages/PyCall/ygXW2/src/PyCall.jl:38  [8] include(mod::Module, _path::String)  @ Base ./Base.jl:308  [9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)  @ Base ./loading.jl:3017  [10] top-level scope  @ stdin:5  [11] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [12] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2863  [13] include_string  @ ./loading.jl:2873 [inlined]  [14] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:328  [15] _start()  @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/startup.jl:41 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/PyCall.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile PyCall [438e738f-606a-5dbb-bf0a-cddfbfd45ab0] to "/home/pkgeval/.julia/compiled/v1.13/PyCall/jl_KWso1H" (ProcessExited(1)). Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)  @ Base ./loading.jl:3304  [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool)  @ Base ./loading.jl:3182  [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()  @ Base ./loading.jl:2669  [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94  [6] #mkpidlock#7  @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined]  [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115  [8] #invokelatest_gr#233  @ ./reflection.jl:1333 [inlined]  [9] invokelatest_gr  @ ./reflection.jl:1325 [inlined]  [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)  @ Base ./loading.jl:3875  [11] maybe_cachefile_lock  @ ./loading.jl:3872 [inlined]  [12] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2655  [13] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2484  [14] macro expansion  @ ./loading.jl:2412 [inlined]  [15] macro expansion  @ ./lock.jl:376 [inlined]  [16] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2376  [17] require  @ ./loading.jl:2352 [inlined]  [18] eval_import_path  @ ./module.jl:36 [inlined]  [19] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [20] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [21] top-level scope  @ ~/.julia/packages/ScikitLearn/Wvn7B/src/Skcore.jl:11  [22] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:309  [23] top-level scope  @ ~/.julia/packages/ScikitLearn/Wvn7B/src/ScikitLearn.jl:12  [24] include(mod::Module, _path::String)  @ Base ./Base.jl:308  [25] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)  @ Base ./loading.jl:3017  [26] top-level scope  @ stdin:5  [27] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [28] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2863  [29] include_string  @ ./loading.jl:2873 [inlined]  [30] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:328  [31] _start()  @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/ScikitLearn/Wvn7B/src/Skcore.jl:5 in expression starting at /home/pkgeval/.julia/packages/ScikitLearn/Wvn7B/src/ScikitLearn.jl:10 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile ScikitLearn [3646fa90-6ef7-5e7e-9f22-8aca16db6324] to "/home/pkgeval/.julia/compiled/v1.13/ScikitLearn/jl_YMHuiE" (ProcessExited(1)). Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)  @ Base ./loading.jl:3304  [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool)  @ Base ./loading.jl:3182  [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()  @ Base ./loading.jl:2669  [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94  [6] #mkpidlock#7  @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined]  [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115  [8] #invokelatest_gr#233  @ ./reflection.jl:1333 [inlined]  [9] invokelatest_gr  @ ./reflection.jl:1325 [inlined]  [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)  @ Base ./loading.jl:3875  [11] maybe_cachefile_lock  @ ./loading.jl:3872 [inlined]  [12] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2655  [13] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2484  [14] macro expansion  @ ./loading.jl:2412 [inlined]  [15] macro expansion  @ ./lock.jl:376 [inlined]  [16] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2376  [17] require  @ ./loading.jl:2352 [inlined]  [18] eval_import_path  @ ./module.jl:36 [inlined]  [19] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [20] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [21] top-level scope  @ ~/.julia/packages/CherenkovDeconvolution/Mui86/src/DeconvUtil.jl:24  [22] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:309  [23] top-level scope  @ ~/.julia/packages/CherenkovDeconvolution/Mui86/src/CherenkovDeconvolution.jl:26  [24] include(mod::Module, _path::String)  @ Base ./Base.jl:308  [25] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3017  [26] top-level scope  @ stdin:5  [27] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [28] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2863  [29] include_string  @ ./loading.jl:2873 [inlined]  [30] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:328  [31] _start()  @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/CherenkovDeconvolution/Mui86/src/DeconvUtil.jl:22 in expression starting at /home/pkgeval/.julia/packages/CherenkovDeconvolution/Mui86/src/CherenkovDeconvolution.jl:22 in expression starting at stdin:5 ✗ CherenkovDeconvolution 0 dependencies successfully precompiled in 29 seconds. 108 already precompiled. ERROR: LoadError: The following 3 direct dependencies failed to precompile: PyCall Failed to precompile PyCall [438e738f-606a-5dbb-bf0a-cddfbfd45ab0] to "/home/pkgeval/.julia/compiled/v1.13/PyCall/jl_XWzf9C" (ProcessExited(1)). ERROR: LoadError: ArgumentError: Source type for `reinterpret` must be isbits Stacktrace: [1] _reinterpret @ ./reinterpretarray.jl:872 [inlined] [2] reinterpret @ ./essentials.jl:783 [inlined] [3] _preserveas!(dest::Vector{UInt8}, ::Type{Cwstring}, x::String) @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:67 [4] Py_SetPythonHome(libpy::Ptr{Nothing}, pyversion::VersionNumber, PYTHONHOME::String) @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:36 [5] top-level scope @ ~/.julia/packages/PyCall/ygXW2/src/startup.jl:57 [6] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:309 [7] top-level scope @ ~/.julia/packages/PyCall/ygXW2/src/PyCall.jl:38 [8] include(mod::Module, _path::String) @ Base ./Base.jl:308 [9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3017 [10] top-level scope @ stdin:5 [11] eval(m::Module, e::Any) @ Core ./boot.jl:489 [12] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2863 [13] include_string @ ./loading.jl:2873 [inlined] [14] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [15] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/startup.jl:41 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/PyCall.jl:1 in expression starting at stdin:5 CherenkovDeconvolution Failed to precompile CherenkovDeconvolution [7995dc16-b5cc-11e8-32a0-21341f07e0b5] to "/home/pkgeval/.julia/compiled/v1.13/CherenkovDeconvolution/jl_NAREaU" (ProcessExited(1)). ERROR: LoadError: ArgumentError: Source type for `reinterpret` must be isbits Stacktrace: [1] _reinterpret @ ./reinterpretarray.jl:872 [inlined] [2] reinterpret @ ./essentials.jl:783 [inlined] [3] _preserveas!(dest::Vector{UInt8}, ::Type{Cwstring}, x::String) @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:67 [4] Py_SetPythonHome(libpy::Ptr{Nothing}, pyversion::VersionNumber, PYTHONHOME::String) @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:36 [5] top-level scope @ ~/.julia/packages/PyCall/ygXW2/src/startup.jl:57 [6] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:309 [7] top-level scope @ ~/.julia/packages/PyCall/ygXW2/src/PyCall.jl:38 [8] include(mod::Module, _path::String) @ Base ./Base.jl:308 [9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3017 [10] top-level scope @ stdin:5 [11] eval(m::Module, e::Any) @ Core ./boot.jl:489 [12] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2863 [13] include_string @ ./loading.jl:2873 [inlined] [14] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [15] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/startup.jl:41 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/PyCall.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile PyCall [438e738f-606a-5dbb-bf0a-cddfbfd45ab0] to "/home/pkgeval/.julia/compiled/v1.13/PyCall/jl_KWso1H" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3304 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3182 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2669 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#233 @ ./reflection.jl:1333 [inlined] [9] invokelatest_gr @ ./reflection.jl:1325 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3875 [11] maybe_cachefile_lock @ ./loading.jl:3872 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2655 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2484 [14] macro expansion @ ./loading.jl:2412 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2376 [17] require @ ./loading.jl:2352 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [20] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [21] top-level scope @ ~/.julia/packages/ScikitLearn/Wvn7B/src/Skcore.jl:11 [22] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:309 [23] top-level scope @ ~/.julia/packages/ScikitLearn/Wvn7B/src/ScikitLearn.jl:12 [24] include(mod::Module, _path::String) @ Base ./Base.jl:308 [25] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3017 [26] top-level scope @ stdin:5 [27] eval(m::Module, e::Any) @ Core ./boot.jl:489 [28] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2863 [29] include_string @ ./loading.jl:2873 [inlined] [30] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [31] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/ScikitLearn/Wvn7B/src/Skcore.jl:5 in expression starting at /home/pkgeval/.julia/packages/ScikitLearn/Wvn7B/src/ScikitLearn.jl:10 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile ScikitLearn [3646fa90-6ef7-5e7e-9f22-8aca16db6324] to "/home/pkgeval/.julia/compiled/v1.13/ScikitLearn/jl_YMHuiE" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3304 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3182 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2669 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#233 @ ./reflection.jl:1333 [inlined] [9] invokelatest_gr @ ./reflection.jl:1325 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3875 [11] maybe_cachefile_lock @ ./loading.jl:3872 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2655 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2484 [14] macro expansion @ ./loading.jl:2412 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2376 [17] require @ ./loading.jl:2352 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [20] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [21] top-level scope @ ~/.julia/packages/CherenkovDeconvolution/Mui86/src/DeconvUtil.jl:24 [22] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:309 [23] top-level scope @ ~/.julia/packages/CherenkovDeconvolution/Mui86/src/CherenkovDeconvolution.jl:26 [24] include(mod::Module, _path::String) @ Base ./Base.jl:308 [25] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3017 [26] top-level scope @ stdin:5 [27] eval(m::Module, e::Any) @ Core ./boot.jl:489 [28] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2863 [29] include_string @ ./loading.jl:2873 [inlined] [30] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [31] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/CherenkovDeconvolution/Mui86/src/DeconvUtil.jl:22 in expression starting at /home/pkgeval/.julia/packages/CherenkovDeconvolution/Mui86/src/CherenkovDeconvolution.jl:22 in expression starting at stdin:5 ScikitLearn Failed to precompile ScikitLearn [3646fa90-6ef7-5e7e-9f22-8aca16db6324] to "/home/pkgeval/.julia/compiled/v1.13/ScikitLearn/jl_KuF2Jp" (ProcessExited(1)). ERROR: LoadError: ArgumentError: Source type for `reinterpret` must be isbits Stacktrace: [1] _reinterpret @ ./reinterpretarray.jl:872 [inlined] [2] reinterpret @ ./essentials.jl:783 [inlined] [3] _preserveas!(dest::Vector{UInt8}, ::Type{Cwstring}, x::String) @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:67 [4] Py_SetPythonHome(libpy::Ptr{Nothing}, pyversion::VersionNumber, PYTHONHOME::String) @ PyCall ~/.julia/packages/PyCall/ygXW2/deps/depsutils.jl:36 [5] top-level scope @ ~/.julia/packages/PyCall/ygXW2/src/startup.jl:57 [6] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:309 [7] top-level scope @ ~/.julia/packages/PyCall/ygXW2/src/PyCall.jl:38 [8] include(mod::Module, _path::String) @ Base ./Base.jl:308 [9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3017 [10] top-level scope @ stdin:5 [11] eval(m::Module, e::Any) @ Core ./boot.jl:489 [12] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2863 [13] include_string @ ./loading.jl:2873 [inlined] [14] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [15] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/startup.jl:41 in expression starting at /home/pkgeval/.julia/packages/PyCall/ygXW2/src/PyCall.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile PyCall [438e738f-606a-5dbb-bf0a-cddfbfd45ab0] to "/home/pkgeval/.julia/compiled/v1.13/PyCall/jl_KseKMn" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3304 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3182 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2669 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#233 @ ./reflection.jl:1333 [inlined] [9] invokelatest_gr @ ./reflection.jl:1325 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3875 [11] maybe_cachefile_lock @ ./loading.jl:3872 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2655 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2484 [14] macro expansion @ ./loading.jl:2412 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2376 [17] require @ ./loading.jl:2352 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [20] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [21] top-level scope @ ~/.julia/packages/ScikitLearn/Wvn7B/src/Skcore.jl:11 [22] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:309 [23] top-level scope @ ~/.julia/packages/ScikitLearn/Wvn7B/src/ScikitLearn.jl:12 [24] include(mod::Module, _path::String) @ Base ./Base.jl:308 [25] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3017 [26] top-level scope @ stdin:5 [27] eval(m::Module, e::Any) @ Core ./boot.jl:489 [28] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2863 [29] include_string @ ./loading.jl:2873 [inlined] [30] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [31] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/ScikitLearn/Wvn7B/src/Skcore.jl:5 in expression starting at /home/pkgeval/.julia/packages/ScikitLearn/Wvn7B/src/ScikitLearn.jl:10 in expression starting at stdin:5 in expression starting at /home/pkgeval/.julia/packages/CherenkovDeconvolution/Mui86/test/runtests.jl:1 Testing failed after 38.23s ERROR: LoadError: Package CherenkovDeconvolution errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2672 [3] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2521 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:538 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:515 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:168 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:157 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [9] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:308 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:330 [14] _start() @ Base ./client.jl:563 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 195.29s: package fails to precompile