Package evaluation of NetSurvival on Julia 1.13.0-DEV.974 (7bbb213719*) started at 2025-08-12T23:47:22.779 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.82s ################################################################################ # Installation # Installing NetSurvival... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [8f9d5d0e] + NetSurvival v0.1.2 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.16.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.19.0 [e2ed5e7c] + Bijections v0.2.2 [336ed68f] + CSV v0.10.15 [082447d4] + ChainRules v1.72.5 [d360d2e6] + ChainRulesCore v1.26.0 [944b1d66] + CodecZlib v0.7.8 [861a8166] + Combinatorics v1.0.3 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.0 [b152e2b5] + CompositeTypes v0.1.4 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 [ae264745] + Copulas v0.1.30 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.7.0 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [5b8099bc] + DomainSets v0.7.16 [7c1d4256] + DynamicPolynomials v0.6.2 [4e289a0a] + EnumX v1.0.5 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.13.0 [1fa38f19] + Format v1.3.7 ⌅ [f6369f11] + ForwardDiff v0.10.38 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [46192b85] + GPUArraysCore v0.2.0 [19dc6840] + HCubature v1.7.0 [34004b35] + HypergeometricFunctions v0.3.28 [842dd82b] + InlineStrings v1.4.4 [18e54dd8] + IntegerMathUtils v0.1.3 [8197267c] + IntervalSets v0.7.11 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [ae98c720] + Jieko v0.2.1 [b964fa9f] + LaTeXStrings v1.4.0 [23fbe1c1] + Latexify v0.16.9 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [2e0e35c7] + Moshi v0.3.7 [102ac46a] + MultivariatePolynomials v0.5.9 [d8a4904e] + MutableArithmetics v1.6.4 [37188c8d] + MvNormalCDF v0.3.2 [77ba4419] + NaNMath v1.1.3 [8f9d5d0e] + NetSurvival v0.1.2 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [69de0a69] + Parsers v2.8.3 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.5.0 [08abe8d2] + PrettyTables v2.4.0 [27ebfcd6] + Primes v0.5.7 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [d40fb65e] + RateTables v0.2.3 [c1ae055f] + RealDot v0.1.0 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.37.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [f2b01f46] + Roots v2.2.8 [7e49a35a] + RuntimeGeneratedFunctions v0.5.15 [0bca4576] + SciMLBase v2.108.0 [c0aeaf25] + SciMLOperators v1.5.0 [53ae85a6] + SciMLStructures v1.7.0 [91c51154] + SentinelArrays v1.4.8 [efcf1570] + Setfield v1.1.2 [1277b4bf] + ShiftedArrays v2.0.0 [a2af1166] + SortingAlgorithms v1.2.2 [dc90abb0] + SparseInverseSubset v0.1.2 [276daf66] + SpecialFunctions v2.5.1 [90137ffa] + StaticArrays v1.9.14 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.6 [4c63d2b9] + StatsFuns v1.5.0 [3eaba693] + StatsModels v0.7.5 [892a3eda] + StringManipulation v0.4.1 [09ab397b] + StructArrays v0.7.1 [9cb6079b] + SurvivalBase v0.1.0 [2efcf032] + SymbolicIndexingInterface v0.3.42 [19f23fe9] + SymbolicLimits v0.2.2 [d1185830] + SymbolicUtils v3.30.0 [0c5d862f] + Symbolics v6.49.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [ed4db957] + TaskLocalValues v0.1.3 [b36ab563] + TaylorDiff v0.3.4 [8ea1fca8] + TermInterface v2.0.0 [a759f4b9] + TimerOutputs v0.5.29 [3bb67fe8] + TranscodingStreams v0.11.3 [a7c27f48] + Unityper v0.1.6 [ea10d353] + WeakRefStrings v1.4.2 [48feb556] + WilliamsonTransforms v0.2.0 [76eceee3] + WorkerUtilities v1.6.1 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.13.1+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 5.56s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 1174.22s ################################################################################ # Testing # Testing NetSurvival Status `/tmp/jl_egP9pC/Project.toml` [336ed68f] CSV v0.10.15 [ae264745] Copulas v0.1.30 [a93c6f00] DataFrames v1.7.0 [31c24e10] Distributions v0.25.120 ⌅ [f6369f11] ForwardDiff v0.10.38 [8f9d5d0e] NetSurvival v0.1.2 [6f49c342] RCall v0.14.9 [d40fb65e] RateTables v0.2.3 [f2b01f46] Roots v2.2.8 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.6 [3eaba693] StatsModels v0.7.5 [9cb6079b] SurvivalBase v0.1.0 [bd369af6] Tables v1.12.1 ⌅ [f8b46487] TestItemRunner v0.2.3 [37e2e46d] LinearAlgebra v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_egP9pC/Manifest.toml` [47edcb42] ADTypes v1.16.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [4fba245c] ArrayInterface v7.19.0 [e2ed5e7c] Bijections v0.2.2 [336ed68f] CSV v0.10.15 [324d7699] CategoricalArrays v1.0.1 [082447d4] ChainRules v1.72.5 [d360d2e6] ChainRulesCore v1.26.0 [944b1d66] CodecZlib v0.7.8 [861a8166] Combinatorics v1.0.3 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.0 [b152e2b5] CompositeTypes v0.1.4 [a33af91c] CompositionsBase v0.1.2 [8f4d0f93] Conda v1.10.2 [187b0558] ConstructionBase v1.6.0 [ae264745] Copulas v0.1.30 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.7.0 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.5 [5b8099bc] DomainSets v0.7.16 [7c1d4256] DynamicPolynomials v0.6.2 [4e289a0a] EnumX v1.0.5 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.13.0 [1fa38f19] Format v1.3.7 ⌅ [f6369f11] ForwardDiff v0.10.38 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 [46192b85] GPUArraysCore v0.2.0 [19dc6840] HCubature v1.7.0 [34004b35] HypergeometricFunctions v0.3.28 [842dd82b] InlineStrings v1.4.4 [18e54dd8] IntegerMathUtils v0.1.3 [8197267c] IntervalSets v0.7.11 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.4 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v0.21.4 [ae98c720] Jieko v0.2.1 [b964fa9f] LaTeXStrings v1.4.0 [23fbe1c1] Latexify v0.16.9 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [2e0e35c7] Moshi v0.3.7 [102ac46a] MultivariatePolynomials v0.5.9 [d8a4904e] MutableArithmetics v1.6.4 [37188c8d] MvNormalCDF v0.3.2 [77ba4419] NaNMath v1.1.3 [8f9d5d0e] NetSurvival v0.1.2 [6fe1bfb0] OffsetArrays v1.17.0 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.35 [69de0a69] Parsers v2.8.3 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.5.0 [08abe8d2] PrettyTables v2.4.0 [27ebfcd6] Primes v0.5.7 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [6f49c342] RCall v0.14.9 [d40fb65e] RateTables v0.2.3 [c1ae055f] RealDot v0.1.0 [3cdcf5f2] RecipesBase v1.3.4 [731186ca] RecursiveArrayTools v3.37.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.8.0 [f2b01f46] Roots v2.2.8 [7e49a35a] RuntimeGeneratedFunctions v0.5.15 [0bca4576] SciMLBase v2.108.0 [c0aeaf25] SciMLOperators v1.5.0 [53ae85a6] SciMLStructures v1.7.0 [91c51154] SentinelArrays v1.4.8 [efcf1570] Setfield v1.1.2 [1277b4bf] ShiftedArrays v2.0.0 [a2af1166] SortingAlgorithms v1.2.2 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.5.1 [90137ffa] StaticArrays v1.9.14 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.6 [4c63d2b9] StatsFuns v1.5.0 [3eaba693] StatsModels v0.7.5 [892a3eda] StringManipulation v0.4.1 [09ab397b] StructArrays v0.7.1 [9cb6079b] SurvivalBase v0.1.0 [2efcf032] SymbolicIndexingInterface v0.3.42 [19f23fe9] SymbolicLimits v0.2.2 [d1185830] SymbolicUtils v3.30.0 [0c5d862f] Symbolics v6.49.0 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [ed4db957] TaskLocalValues v0.1.3 [b36ab563] TaylorDiff v0.3.4 [8ea1fca8] TermInterface v2.0.0 ⌅ [f8b46487] TestItemRunner v0.2.3 ⌅ [1c621080] TestItems v0.1.1 [a759f4b9] TimerOutputs v0.5.29 [3bb67fe8] TranscodingStreams v0.11.3 [a7c27f48] Unityper v0.1.6 [81def892] VersionParsing v1.3.0 [ea10d353] WeakRefStrings v1.4.2 [48feb556] WilliamsonTransforms v0.2.0 [1b915085] WinReg v1.0.0 [76eceee3] WorkerUtilities v1.6.1 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.7.15 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.2+0 [efcefdf7] PCRE2_jll v10.45.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... 7058.0 ms ✓ CategoricalArrays → CategoricalArraysStatsBaseExt 1734.4 ms ✓ CategoricalArrays → CategoricalArraysJSONExt 2 dependencies successfully precompiled in 12 seconds. 78 already precompiled. Precompiling packages... 3816.7 ms ✓ CategoricalArrays → CategoricalArraysRecipesBaseExt 1 dependency successfully precompiled in 4 seconds. 16 already precompiled. Precompiling packages... 17492.0 ms ✓ SciMLBase → SciMLBaseRCallExt 1 dependency successfully precompiled in 20 seconds. 123 already precompiled. Assess all NPNSEstimators: Error During Test at /home/pkgeval/.julia/packages/NetSurvival/vUy5T/test/sampletest.jl:44 Test threw exception Expression: test_surv("pohar-perme", PoharPerme, args...) REvalError: Error in loadNamespace(x) : there is no package called ‘relsurv’ Calls: loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart Stacktrace: [1] handle_eval_stderr(; as_warning::Bool) @ RCall ~/.julia/packages/RCall/GLHIY/src/io.jl:173 [2] handle_eval_stderr @ ~/.julia/packages/RCall/GLHIY/src/io.jl:167 [inlined] [3] reval_p(expr::Ptr{RCall.LangSxp}, env::Ptr{RCall.EnvSxp}) @ RCall ~/.julia/packages/RCall/GLHIY/src/eval.jl:103 [4] reval_p(expr::Ptr{RCall.ExprSxp}, env::Ptr{RCall.EnvSxp}) @ RCall ~/.julia/packages/RCall/GLHIY/src/eval.jl:119 [5] reval(str::String, env::RCall.RObject{RCall.EnvSxp}) @ RCall ~/.julia/packages/RCall/GLHIY/src/eval.jl:136 [6] macro expansion @ ~/.julia/packages/RCall/GLHIY/src/macros.jl:74 [inlined] [7] test_surv(::String, ::Type{NetSurvival.PoharPerme}, ::DataFrames.DataFrame, ::RateTables.RateTable{1, @NamedTuple{sex::Tuple{Symbol, Symbol}}, @NamedTuple{female::RateTables.BasicRateTable, male::RateTables.BasicRateTable}}, ::Vector{Float64}, ::Vararg{Any}) @ Main.var"##285" ~/.julia/packages/NetSurvival/vUy5T/test/sampletest.jl:24 [8] eval_test_function(func::Any, args::Any, kwargs::Any, quoted_func::Union{Expr, Symbol}, source::LineNumberNode, negate::Bool) @ Test /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:388 [9] top-level scope @ ~/.julia/packages/NetSurvival/vUy5T/test/sampletest.jl:533 [10] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:742 [inlined] Assess all NPNSEstimators: Error During Test at /home/pkgeval/.julia/packages/NetSurvival/vUy5T/test/sampletest.jl:45 Test threw exception Expression: test_surv("ederer1", EdererI, args...) REvalError: Error in loadNamespace(x) : there is no package called ‘relsurv’ Calls: loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart Stacktrace: [1] handle_eval_stderr(; as_warning::Bool) @ RCall ~/.julia/packages/RCall/GLHIY/src/io.jl:173 [2] handle_eval_stderr @ ~/.julia/packages/RCall/GLHIY/src/io.jl:167 [inlined] [3] reval_p(expr::Ptr{RCall.LangSxp}, env::Ptr{RCall.EnvSxp}) @ RCall ~/.julia/packages/RCall/GLHIY/src/eval.jl:103 [4] reval_p(expr::Ptr{RCall.ExprSxp}, env::Ptr{RCall.EnvSxp}) @ RCall ~/.julia/packages/RCall/GLHIY/src/eval.jl:119 [5] reval(str::String, env::RCall.RObject{RCall.EnvSxp}) @ RCall ~/.julia/packages/RCall/GLHIY/src/eval.jl:136 [6] macro expansion @ ~/.julia/packages/RCall/GLHIY/src/macros.jl:74 [inlined] [7] test_surv(::String, ::Type{NetSurvival.EdererI}, ::DataFrames.DataFrame, ::RateTables.RateTable{1, @NamedTuple{sex::Tuple{Symbol, Symbol}}, @NamedTuple{female::RateTables.BasicRateTable, male::RateTables.BasicRateTable}}, ::Vector{Float64}, ::Vararg{Any}) @ Main.var"##285" ~/.julia/packages/NetSurvival/vUy5T/test/sampletest.jl:24 [8] eval_test_function(func::Any, args::Any, kwargs::Any, quoted_func::Union{Expr, Symbol}, source::LineNumberNode, negate::Bool) @ Test /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:388 [9] top-level scope @ ~/.julia/packages/NetSurvival/vUy5T/test/sampletest.jl:533 [10] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:742 [inlined] Assess all NPNSEstimators: Error During Test at /home/pkgeval/.julia/packages/NetSurvival/vUy5T/test/sampletest.jl:46 Test threw exception Expression: test_surv("ederer2", EdererII, args...) REvalError: Error in loadNamespace(x) : there is no package called ‘relsurv’ Calls: loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart Stacktrace: [1] handle_eval_stderr(; as_warning::Bool) @ RCall ~/.julia/packages/RCall/GLHIY/src/io.jl:173 [2] handle_eval_stderr @ ~/.julia/packages/RCall/GLHIY/src/io.jl:167 [inlined] [3] reval_p(expr::Ptr{RCall.LangSxp}, env::Ptr{RCall.EnvSxp}) @ RCall ~/.julia/packages/RCall/GLHIY/src/eval.jl:103 [4] reval_p(expr::Ptr{RCall.ExprSxp}, env::Ptr{RCall.EnvSxp}) @ RCall ~/.julia/packages/RCall/GLHIY/src/eval.jl:119 [5] reval(str::String, env::RCall.RObject{RCall.EnvSxp}) @ RCall ~/.julia/packages/RCall/GLHIY/src/eval.jl:136 [6] macro expansion @ ~/.julia/packages/RCall/GLHIY/src/macros.jl:74 [inlined] [7] test_surv(::String, ::Type{NetSurvival.EdererII}, ::DataFrames.DataFrame, ::RateTables.RateTable{1, @NamedTuple{sex::Tuple{Symbol, Symbol}}, @NamedTuple{female::RateTables.BasicRateTable, male::RateTables.BasicRateTable}}, ::Vector{Float64}, ::Vararg{Any}) @ Main.var"##285" ~/.julia/packages/NetSurvival/vUy5T/test/sampletest.jl:24 [8] eval_test_function(func::Any, args::Any, kwargs::Any, quoted_func::Union{Expr, Symbol}, source::LineNumberNode, negate::Bool) @ Test /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:388 [9] top-level scope @ ~/.julia/packages/NetSurvival/vUy5T/test/sampletest.jl:533 [10] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:742 [inlined] ERROR: LoadError: REvalError: Error in loadNamespace(x) : there is no package called ‘relsurv’ Calls: loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart Stacktrace: [1] handle_eval_stderr(; as_warning::Bool) @ RCall ~/.julia/packages/RCall/GLHIY/src/io.jl:173 [2] handle_eval_stderr @ ~/.julia/packages/RCall/GLHIY/src/io.jl:167 [inlined] [3] reval_p(expr::Ptr{RCall.LangSxp}, env::Ptr{RCall.EnvSxp}) @ RCall ~/.julia/packages/RCall/GLHIY/src/eval.jl:103 [4] reval_p(expr::Ptr{RCall.ExprSxp}, env::Ptr{RCall.EnvSxp}) @ RCall ~/.julia/packages/RCall/GLHIY/src/eval.jl:119 [5] reval(str::String, env::RCall.RObject{RCall.EnvSxp}) @ RCall ~/.julia/packages/RCall/GLHIY/src/eval.jl:136 [6] top-level scope @ ~/.julia/packages/NetSurvival/vUy5T/test/sampletest.jl:74 [7] eval(m::Module, e::Any) @ Core ./boot.jl:489 [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2847 [9] include_string(m::Module, txt::String, fname::String) @ Base ./loading.jl:2857 [10] #run_testitem##0 @ ~/.julia/packages/TestItemRunner/uEMJE/src/TestItemRunner.jl:102 [inlined] [11] withpath(f::TestItemRunner.var"#run_testitem##0#run_testitem##1"{String, String, Module}, path::String) @ TestItemRunner ~/.julia/packages/TestItemRunner/uEMJE/src/vendored_code.jl:7 [12] run_testitem(filepath::String, use_default_usings::Bool, setups::Vector{Symbol}, package_name::String, original_code::String, line::Int64, column::Int64, test_setup_module_set::TestItemRunner.TestSetupModuleSet) @ TestItemRunner ~/.julia/packages/TestItemRunner/uEMJE/src/TestItemRunner.jl:101 [13] run_tests(path::String; filter::Nothing, verbose::Bool) @ TestItemRunner ~/.julia/packages/TestItemRunner/uEMJE/src/TestItemRunner.jl:185 [14] run_tests(path::String) @ TestItemRunner ~/.julia/packages/TestItemRunner/uEMJE/src/TestItemRunner.jl:106 [15] top-level scope @ ~/.julia/packages/NetSurvival/vUy5T/test/runtests.jl:3 [16] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [17] top-level scope @ none:6 [18] eval(m::Module, e::Any) @ Core ./boot.jl:489 [19] exec_options(opts::Base.JLOptions) @ Base ./client.jl:286 [20] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/NetSurvival/vUy5T/test/sampletest.jl:93 in expression starting at /home/pkgeval/.julia/packages/NetSurvival/vUy5T/test/runtests.jl:3 Testing failed after 262.13s ERROR: LoadError: Package NetSurvival errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2672 [3] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2521 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:538 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:515 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:168 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:157 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [9] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:311 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:320 [14] _start() @ Base ./client.jl:553 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 1502.24s: package tests unexpectedly errored