Package evaluation of JobSchedulers on Julia 1.13.0-DEV.974 (7bbb213719*) started at 2025-08-12T16:09:57.227 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.05s ################################################################################ # Installation # Installing JobSchedulers... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [eeff360b] + JobSchedulers v0.11.10 Updating `~/.julia/environments/v1.13/Manifest.toml` [1520ce14] + AbstractTrees v0.4.5 ⌅ [da1fd8a2] + CodeTracking v1.3.9 [34da2185] + Compat v4.18.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [ffbed154] + DocStringExtensions v0.9.5 [5789e2e9] + FileIO v1.17.0 [48062228] + FilePathsBase v0.9.24 [076d061b] + HashArrayMappedTries v0.2.0 [eafb193a] + Highlights v0.5.3 [82899510] + IteratorInterfaceExtensions v1.0.0 [033835bb] + JLD2 v0.5.15 [682c06a0] + JSON v0.21.4 [eeff360b] + JobSchedulers v0.11.10 [b964fa9f] + LaTeXStrings v1.4.0 [1914dd2f] + MacroTools v0.5.16 [1c23619d] + MyterialColors v0.3.0 [bac558e1] + OrderedCollections v1.8.1 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [ef544631] + Pipelines v0.11.1 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.5.0 [08abe8d2] + PrettyTables v2.4.0 [33c8b6b6] + ProgressLogging v0.1.5 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [7e506255] + ScopedValues v1.4.0 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [22787eb5] + Term v2.0.7 [5a1048b7] + Terming v0.2.6 [3bb67fe8] + TranscodingStreams v0.11.3 [3a884ed6] + UnPack v1.0.2 [1cfade01] + UnicodeFun v0.4.1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+1 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.7.15 [458c3c95] + OpenSSL_jll v3.5.2+0 [efcefdf7] + PCRE2_jll v10.45.0+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 3.9s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 194.64s ################################################################################ # Testing # Testing JobSchedulers Status `/tmp/jl_SfEjeU/Project.toml` ⌅ [864edb3b] DataStructures v0.18.22 [033835bb] JLD2 v0.5.15 [682c06a0] JSON v0.21.4 [eeff360b] JobSchedulers v0.11.10 [ef544631] Pipelines v0.11.1 [aea7be01] PrecompileTools v1.3.2 [08abe8d2] PrettyTables v2.4.0 [189a3867] Reexport v1.2.2 [22787eb5] Term v2.0.7 [5a1048b7] Terming v0.2.6 [ade2ca70] Dates v1.11.0 [56ddb016] Logging v1.11.0 [de0858da] Printf v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_SfEjeU/Manifest.toml` [1520ce14] AbstractTrees v0.4.5 ⌅ [da1fd8a2] CodeTracking v1.3.9 [34da2185] Compat v4.18.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [ffbed154] DocStringExtensions v0.9.5 [5789e2e9] FileIO v1.17.0 [48062228] FilePathsBase v0.9.24 [076d061b] HashArrayMappedTries v0.2.0 [eafb193a] Highlights v0.5.3 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.5.15 [682c06a0] JSON v0.21.4 [eeff360b] JobSchedulers v0.11.10 [b964fa9f] LaTeXStrings v1.4.0 [1914dd2f] MacroTools v0.5.16 [1c23619d] MyterialColors v0.3.0 [bac558e1] OrderedCollections v1.8.1 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [ef544631] Pipelines v0.11.1 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.5.0 [08abe8d2] PrettyTables v2.4.0 [33c8b6b6] ProgressLogging v0.1.5 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [7e506255] ScopedValues v1.4.0 [892a3eda] StringManipulation v0.4.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [22787eb5] Term v2.0.7 [5a1048b7] Terming v0.2.6 [3bb67fe8] TranscodingStreams v0.11.3 [3a884ed6] UnPack v1.0.2 [1cfade01] UnicodeFun v0.4.1 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.7.15 [458c3c95] OpenSSL_jll v3.5.2+0 [efcefdf7] PCRE2_jll v10.45.0+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... [ Info: Scheduler task is running. [ Info: Scheduler reactivation task is running. ┌ Info: Scheduler is running. │ SCHEDULER_MAX_CPU = 1 │ SCHEDULER_MAX_MEM = "28.8 GB" │ JOB_QUEUE.max_done = 10000 │ JOB_QUEUE.max_cancelled = 10000 │ SCHEDULER_TASK[] = Task (runnable, started) @0x000077893c886590 └ SCHEDULER_REACTIVATION_TASK[] = Task (runnable, started) @0x000077893c886680 [ Info: Scheduler task stops. ┌ Warning: Scheduler reactivation task is not running. └ @ JobSchedulers ~/.julia/packages/JobSchedulers/KBgG9/src/control.jl:92 ┌ Info: Scheduler is not running. │ SCHEDULER_MAX_CPU = 1 │ SCHEDULER_MAX_MEM = "28.8 GB" │ JOB_QUEUE.max_done = 10000 │ JOB_QUEUE.max_cancelled = 10000 │ SCHEDULER_TASK[] = Task (done) @0x000077893c886590 └ SCHEDULER_REACTIVATION_TASK[] = Task (done) @0x000077893c886680 ┌ Warning: Scheduler task was interrupted or done. Restart. └ @ JobSchedulers ~/.julia/packages/JobSchedulers/KBgG9/src/control.jl:61 ┌ Warning: Scheduler reactivation task was interrupted or done. Restart. └ @ JobSchedulers ~/.julia/packages/JobSchedulers/KBgG9/src/control.jl:61 ┌ Info: Scheduler is running. │ SCHEDULER_MAX_CPU = 1 │ SCHEDULER_MAX_MEM = "28.8 GB" │ JOB_QUEUE.max_done = 10000 │ JOB_QUEUE.max_cancelled = 10000 │ SCHEDULER_TASK[] = Task (runnable, started) @0x000077892a25c880 └ SCHEDULER_REACTIVATION_TASK[] = Task (runnable, started) @0x000077892a25c970 ┌ Info: Scheduler is running. │ SCHEDULER_MAX_CPU = 1 │ SCHEDULER_MAX_MEM = "28.8 GB" │ JOB_QUEUE.max_done = 10000 │ JOB_QUEUE.max_cancelled = 10000 │ SCHEDULER_TASK[] = Task (runnable, started) @0x000077892a25c880 └ SCHEDULER_REACTIVATION_TASK[] = Task (runnable, started) @0x000077892a25c970 ┌ Info: Scheduler is running. │ SCHEDULER_MAX_CPU = 1 │ SCHEDULER_MAX_MEM = "28.8 GB" │ JOB_QUEUE.max_done = 10000 │ JOB_QUEUE.max_cancelled = 10000 │ SCHEDULER_TASK[] = Task (runnable, started) @0x000077892a25c880 └ SCHEDULER_REACTIVATION_TASK[] = Task (runnable, started) @0x000077892a25c970 Job: id → 9256044632919794 name → "high_priority" user → "" ncpu → 1.0 mem → 0 B schedule_time → na submit_time → na start_time → na stop_time → na wall_time → 1 year cron → Cron(:none) until → forever state → :queuing priority → 0 dependency → [] stdout → nothing stderr → nothing task → Task (runnable) @0x00007789290cb3a0 [ Info: scheduler_balance_check: wait_queue: job submission highpriority ┌ Info: Scheduler is running. │ SCHEDULER_MAX_CPU = 1 │ SCHEDULER_MAX_MEM = "28.8 GB" │ JOB_QUEUE.max_done = 10000 │ JOB_QUEUE.max_cancelled = 10000 │ SCHEDULER_TASK[] = Task (runnable, started) @0x000077892a25c880 └ SCHEDULER_REACTIVATION_TASK[] = Task (runnable, started) @0x000077892a25c970 ┌ Info: Scheduler is running. │ SCHEDULER_MAX_CPU = 1 │ SCHEDULER_MAX_MEM = "28.8 GB" │ JOB_QUEUE.max_done = 10000 │ JOB_QUEUE.max_cancelled = 10000 │ SCHEDULER_TASK[] = Task (runnable, started) @0x000077892a25c880 └ SCHEDULER_REACTIVATION_TASK[] = Task (runnable, started) @0x000077892a25c970 [ Info: submit!(job2) [ Info: cancel!(job2) [ Info: scheduler_balance_check: wait_queue: job cancellation highpriority midpriority lowpriority 1 2 3 4 5 6 7 8 9 10 ┌ Info: Scheduler is running. │ SCHEDULER_MAX_CPU = 1 │ SCHEDULER_MAX_MEM = "28.8 GB" │ JOB_QUEUE.max_done = 10000 │ JOB_QUEUE.max_cancelled = 10000 │ SCHEDULER_TASK[] = Task (runnable, started) @0x000077892a25c880 └ SCHEDULER_REACTIVATION_TASK[] = Task (runnable, started) @0x000077892a25c970 ┌ Warning: ncpu > 1 for Job(task::Task) is not fully supported if the task uses multi-threads (except for running threaded commands), it is recommended to split it into different jobs. Job: job with args. └ @ JobSchedulers ~/.julia/packages/JobSchedulers/KBgG9/src/jobs.jl:121 job_no_cpu ok dep1 ok dep2 ok job with dep1 and dep2 ok job with dep2 ok job with dep3 ok [ Info: 2025-08-12 16:15:25 Scheduler backup done: /tmp/jl_job_scheduler_backup [ Info: Settings recovered from the backup file (/tmp/jl_job_scheduler_backup) [ Info: Settings recovered from the backup file (/tmp/jl_job_scheduler_backup) [ Info: Settings recovered from the backup file (/tmp/jl_job_scheduler_backup) [ Info: 2025-08-12 16:16:30 Scheduler backup done: /tmp/jl_job_scheduler_backup2 [ Info: Settings recovered from the backup file (/tmp/jl_job_scheduler_backup) [ Info: Settings recovered from the backup file (/tmp/jl_job_scheduler_backup) [ Info: Settings recovered from the backup file (/tmp/jl_job_scheduler_backup2) [ Info: Stop scheduler backup. ┌ Warning: The following will show method error of + └ @ Main ~/.julia/packages/JobSchedulers/KBgG9/test/runtests.jl:226 ┌ Warning: The current Julia session only supports single-thread JobSchedulers. Submitting a JuliaProgram with this Julia session is not recommended because it might block schedulers and parallel jobs. Starting Julia with multiple *default* threads is suggested. JobSchedulers do not use interactive thread pool. Help: https://docs.julialang.org/en/v1/manual/multi-threading/#Starting-Julia-with-multiple-threads └ @ JobSchedulers ~/.julia/packages/JobSchedulers/KBgG9/src/compat_pipelines.jl:5 ┌ Info: 2025-08-12 16:16:41 Started: Command Program │ command_template = `echo INPUT1 INPUT2` │ run_id = Base.UUID("5c48891b-9404-5ec6-a795-2429b39fb940") │ inputs = Dict{String, Any} with 2 entries: … └ outputs = Dict{String, Any}() Hello, Pipeline.jl ┌ Info: 2025-08-12 16:16:43 Finished: Command Program │ command_running = `echo Hello, Pipeline.jl` │ run_id = Base.UUID("5c48891b-9404-5ec6-a795-2429b39fb940") │ inputs = Dict{String, Any} with 2 entries: … └ outputs = Dict{String, Any}() ┌ Info: 2025-08-12 16:16:43 Started: Command Program │ command_template = `echo INPUT1 INPUT2` │ run_id = Base.UUID("5c48891b-9404-5ec6-a795-2429b39fb940") │ inputs = Dict{String, Any} with 2 entries: … └ outputs = Dict{String, Any}() Hello, Pipeline.jl ┌ Info: 2025-08-12 16:16:43 Finished: Command Program │ command_running = `echo Hello, Pipeline.jl` │ run_id = Base.UUID("5c48891b-9404-5ec6-a795-2429b39fb940") │ inputs = Dict{String, Any} with 2 entries: … └ outputs = Dict{String, Any}() ┌ Info: 2025-08-12 16:16:45 Started: Julia Program with Errors │ run_id = Base.UUID("35f6b504-9009-5a6e-b9e9-116071f60a7b") │ inputs = │ Dict{String, Any} with 2 entries: │ "a" => 10.6 │ "b" => 5 └ outputs = Dict{String, Any}() ┌ Error: 2025-08-12 16:16:45 ProgramRunningError: Julia Program with Errors: fail to run the main function. │ run_id = Base.UUID("35f6b504-9009-5a6e-b9e9-116071f60a7b") │ inputs = │ Dict{String, Any} with 2 entries: │ "a" => 10.6 │ "b" => 5 └ outputs = Dict{String, Any}() MethodError: no method matching +(::Int64, ::String) The function `+` exists, but no method is defined for this combination of argument types. Closest candidates are: +(::Any, ::Any, !Matched::Any, !Matched::Any...) @ Base operators.jl:643 +(::Integer, !Matched::AbstractChar) @ Base char.jl:254 +(::Integer, !Matched::Rational) @ Base rational.jl:392 ... Stacktrace: [1] (::var"#51#52")(inputs::Dict{String, Any}, outputs::Dict{String, Any}) @ Main ~/.julia/packages/JobSchedulers/KBgG9/test/runtests.jl:223 [2] _run(p::JuliaProgram; inputs::Dict{String, Any}, outputs::Dict{String, Any}, skip_when_done::Bool, check_dependencies::Bool, verbose::Bool, touch_run_id_file::Bool, dry_run::Bool, dir::String, _do_xxputs_completion_and_check::Bool) @ Pipelines ~/.julia/packages/Pipelines/CkayS/src/JuliaProgram.jl:264 [3] kwcall(::@NamedTuple{dir::String, _do_xxputs_completion_and_check::Bool, inputs::Dict{String, Any}, outputs::Dict{String, Any}, touch_run_id_file::Bool}, ::typeof(Pipelines._run), p::JuliaProgram) @ Pipelines ~/.julia/packages/Pipelines/CkayS/src/JuliaProgram.jl:177 [4] (::Pipelines.var"#36#37"{Int64, Bool, @Kwargs{_do_xxputs_completion_and_check::Bool, inputs::Dict{String, Any}, outputs::Dict{String, Any}, touch_run_id_file::Bool}, JuliaProgram})() @ Pipelines ~/.julia/packages/Pipelines/CkayS/src/Program.jl:0 [5] try_function(f::Pipelines.var"#36#37"{Int64, Bool, @Kwargs{_do_xxputs_completion_and_check::Bool, inputs::Dict{String, Any}, outputs::Dict{String, Any}, touch_run_id_file::Bool}, JuliaProgram}, ::Nothing) @ Pipelines ~/.julia/packages/Pipelines/CkayS/src/redirection.jl:151 [6] #redirect_to_files#6 @ ~/.julia/packages/Pipelines/CkayS/src/redirection.jl:223 [inlined] [7] redirect_to_files @ ~/.julia/packages/Pipelines/CkayS/src/redirection.jl:200 [inlined] [8] run(p::JuliaProgram; dir::String, retry::Int64, stdout::Nothing, stderr::Nothing, stdlog::Nothing, append::Bool, _do_parse_program_args::Bool, kwarg::@Kwargs{_do_xxputs_completion_and_check::Bool, inputs::Dict{String, Any}, outputs::Dict{String, Any}, touch_run_id_file::Bool}) @ Pipelines ~/.julia/packages/Pipelines/CkayS/src/Program.jl:297 [9] kwcall(::@NamedTuple{_do_parse_program_args::Bool, _do_xxputs_completion_and_check::Bool, inputs::Dict{String, Any}, outputs::Dict{String, Any}, stdout::Nothing, stderr::Nothing, dir::String, touch_run_id_file::Bool}, ::typeof(run), p::JuliaProgram) @ Pipelines ~/.julia/packages/Pipelines/CkayS/src/Program.jl:272 [10] (::JobSchedulers.var"#f#123"{Nothing, Nothing, String, JuliaProgram, Vector{Pair{Symbol, Bool}}})() @ JobSchedulers ~/.julia/packages/JobSchedulers/KBgG9/src/compat_pipelines.jl:73 [11] (::JobSchedulers.var"#124#125"{Job, JobSchedulers.var"#f#123"{Nothing, Nothing, String, JuliaProgram, Vector{Pair{Symbol, Bool}}}})() @ JobSchedulers ~/.julia/packages/JobSchedulers/KBgG9/src/compat_pipelines.jl:83 [ Info: 2025-08-12 16:16:54 Started: Echo [7c9427a7-3fa6-598f-b1e9-3532b0cbd4b4] x = Dict{String, Any}("optional_arg2" => 0.5, "input" => :xxx, "optional_arg" => :sym, "input2" => 22) y = Dict{String, Any}("output" => "iout") [ Info: 2025-08-12 16:16:54 Finished: Echo [7c9427a7-3fa6-598f-b1e9-3532b0cbd4b4] [ Info: 2025-08-12 16:16:56 Started: Echo [42325ca5-7157-5bf0-bd28-38e587cd8fb4] inputs["NAME"] = "cihga39871" inputs["USER"] = "CJC" inputs["NCPU"] = 3 inputs["MEM"] = 666 [ Info: 2025-08-12 16:16:56 Finished: Echo [42325ca5-7157-5bf0-bd28-38e587cd8fb4] ┌ Warning: `JobSchedulers.SINGLE_THREAD_MODE[]` during testing. It will not test multi-thread related codes. └ @ Main ~/.julia/packages/JobSchedulers/KBgG9/test/runtests.jl:313 [ Info: scheduler_balance_check: wait_queue: thread ID test ┌ Info: Scheduler is running. │ SCHEDULER_MAX_CPU = 1 │ SCHEDULER_MAX_MEM = "28.8 GB" │ JOB_QUEUE.max_done = 10000 │ JOB_QUEUE.max_cancelled = 10000 │ SCHEDULER_TASK[] = Task (runnable, started) @0x000077892a25c880 └ SCHEDULER_REACTIVATION_TASK[] = Task (runnable, started) @0x000077892a25c970 ┌ Info: 2023-01-04 11:19:45 Started: prog │ command_template = `prog` │ run_id = UUID("39f4d9ab-046a-5184-a120-53a1a937fe13") │ inputs = │ Dict{String, Any} with 4 entries: │ "INPUT_SEQ" => "/path/3.xxx/SN005-… │ "OTHER_ARGS" => `` │ "DB" => "/path/Reference/prog-pluspfp-db-i… │ "THREADS" => 10 │ outputs = │ Dict{String, Any} with 4 entries: │ "UNCLASSIFIED_OUT" => "/path/3.1.yyy │ "REPORT" => "/path/3.1.yyy │ "OUTPUT" => "/path/3.1.yyy └ "CLASSIFIED_OUT" => "/path/3.1.yyy 8103 sequences (10.58 Mbp) processed in 0.888s (547.4 Kseq/m, 714.99 Mbp/m). 1876 sequences classified (23.15%) 6227 sequences unclassified (76.85%) ┌ Info: 2023-01-04 11:19:47 Finished: prog │ command_running = `prog` │ run_id = UUID("1742c504-4eef-5b06-8c1a-dcab689c6d1a") │ inputs = │ Dict{String, Any} with 4 entries: │ "INPUT_SEQ" => "/path/3.xxx/SN005-… │ "OTHER_ARGS" => `` │ "DB" => "/path/Reference/prog-pluspfp-db-i… │ "THREADS" => 10 │ outputs = │ Dict{String, Any} with 4 entries: │ "UNCLASSIFIED_OUT" => "/path/3.1.yyy │ "REPORT" => "/path/3.1.yyy │ "OUTPUT" => "/path/3.1.yyy └ "CLASSIFIED_OUT" => "/path/3.1.yyy ┌ Info: 2023-01-04 11:19:47 Started: prog │ command_template = `prog` │ run_id = UUID("1033dc81-c747-5987-8b43-ade755fc1eb7") │ inputs = │ Dict{String, Any} with 4 entries: │ "INPUT_SEQ" => "/path/3.xxx/SN005-… │ "OTHER_ARGS" => `` │ "DB" => "/path/Reference/prog-pluspfp-db-i… │ "THREADS" => 10 │ outputs = │ Dict{String, Any} with 4 entries: │ "UNCLASSIFIED_OUT" => "/path/3.1.yyy │ "REPORT" => "/path/3.1.yyy │ "OUTPUT" => "/path/3.1.yyy └ "CLASSIFIED_OUT" => "/path/3.1.yyy 12766 sequences (17.22 Mbp) processed in 1.243s (616.5 Kseq/m, 831.43 Mbp/m). 7363 sequences classified (57.68%) 5403 sequences unclassified (42.32%) ┌ Info: 2023-01-04 11:19:50 Finished: prog │ command_running = `prog` │ run_id = UUID("3b196da2-0ba7-5814-9cd3-fe85aeba3b23") │ inputs = │ Dict{String, Any} with 4 entries: │ "INPUT_SEQ" => "/path/3.xxx/SN005-… │ "OTHER_ARGS" => `` │ "DB" => "/path/Reference/prog-pluspfp-db-i… │ "THREADS" => 10 │ outputs = │ Dict{String, Any} with 4 entries: │ "UNCLASSIFIED_OUT" => "/path/3.1.yyy │ "REPORT" => "/path/3.1.yyy │ "OUTPUT" => "/path/3.1.yyy └ "CLASSIFIED_OUT" => "/path/3.1.yyy ▕ ▎ ▕▍▎ ▕█▎ ▕ ▎ ▕████████▎ ▕████████▎  0.00% ▕ ▎  98.50% ▕█████████▉▎  5.00% ▕▌ ▎  19.90% ▕█ ▎ stdout 1 stdout 2 stdout 3 stdout 4 stdout 5 stdout 6 stdout 7 stdout 8 stdout 9 stdout 10 ERROR: test stderr color 1 ERROR: test stderr color 2 ERROR: test stderr color 3 ERROR: test stderr color 4 ERROR: test stderr color 5 ERROR: test stderr color 6 ERROR: test stderr color 7 ERROR: test stderr color 8 ERROR: test stderr color 9 ERROR: test stderr color 10 [ Info: log 1 [ Info: log 2 [ Info: log 3 [ Info: log 4 [ Info: log 5 [ Info: log 6 [ Info: log 7 [ Info: log 8 [ Info: log 9 [ Info: log 10 CURRENT RESOURCES: CPU: 0.0/1 MEM: 0.00% NO JOB SUBMITTED. 30-element Vector{Job}: ┌─────┬────────────┬──────────────────┬──────────────────────┬───────┬──────┬───────┬──────────┬────────────┬────────────┬───────────┬───────────────┬─────────────┬───────────┬──────┬─────────┐ │ Row │ state │ id │ name │ user │ ncpu │ mem │ priority │ dependency │ start_time │ stop_time │ schedule_time │ submit_time │ wall_time │ cron │ until │ ├─────┼────────────┼──────────────────┼──────────────────────┼───────┼──────┼───────┼──────────┼────────────┼────────────┼───────────┼───────────────┼─────────────┼───────────┼──────┼─────────┤ │ 1 │ :failed │ 9256044633701270 │ "Julia Program with… │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:16:43 │ 16:16:51 │ na │ 16:16:41 │ 1 year │ │ forever │ │ 2 │ :cancelled │ 9256044633384923 │ "to_cancel2" │ "" │ 1.0 │ 0 B │ 20 │ [] │ na │ 16:14:15 │ na │ 16:14:15 │ 1 year │ │ forever │ │ 3 │ :cancelled │ 9256044633354729 │ "to_cancel" │ "" │ 1.0 │ 0 B │ 20 │ [] │ na │ 16:14:15 │ na │ 16:14:14 │ 1 year │ │ forever │ │ 4 │ :done │ 9256044632854575 │ "task job" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:14:08 │ 16:14:09 │ na │ 16:14:07 │ 1 year │ │ forever │ │ 5 │ :done │ 9256044632886396 │ "function job" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:14:09 │ 16:14:10 │ na │ 16:14:07 │ 1 year │ │ forever │ │ 6 │ :done │ 9256044633087994 │ "batch: 2" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:14:23 │ 16:14:25 │ na │ 16:14:14 │ 1 year │ │ forever │ │ 7 │ :done │ 9256044633181757 │ "batch: 5" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:14:29 │ 16:14:31 │ na │ 16:14:14 │ 1 year │ │ forever │ │ 8 │ :done │ 9256044633208981 │ "batch: 6" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:14:31 │ 16:14:33 │ na │ 16:14:14 │ 1 year │ │ forever │ │ 9 │ :done │ 9256044633279890 │ "batch: 8" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:14:35 │ 16:14:37 │ na │ 16:14:14 │ 1 year │ │ forever │ │ 10 │ :done │ 9256044633476769 │ "dep: job_with_dep" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:14:47 │ 16:14:47 │ na │ 16:14:41 │ 1 year │ │ forever │ │ 11 │ :done │ 9256044633542882 │ "dep: job_with_dep" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:14:47 │ 16:14:47 │ na │ 16:14:41 │ 1 year │ │ forever │ │ 12 │ :done │ 9256044632823653 │ "command job" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:14:07 │ 16:14:08 │ na │ 16:14:07 │ 1 year │ │ forever │ │ 13 │ :done │ 9256044633061328 │ "batch: 1" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:14:21 │ 16:14:23 │ na │ 16:14:14 │ 1 year │ │ forever │ │ 14 │ :done │ 9256044633109952 │ "batch: 3" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:14:25 │ 16:14:27 │ na │ 16:14:14 │ 1 year │ │ forever │ │ 15 │ :done │ 9256044633325159 │ "batch: 10" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:14:39 │ 16:14:41 │ na │ 16:14:14 │ 1 year │ │ forever │ │ 16 │ :done │ 9256044633414026 │ "dep: 1" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:14:42 │ 16:14:44 │ na │ 16:14:41 │ 1 year │ │ forever │ │ 17 │ :done │ 9256044632919794 │ "high_priority" │ "" │ 1.0 │ 0 B │ 0 │ [] │ 16:14:12 │ 16:14:14 │ na │ 16:14:11 │ 1 year │ │ forever │ │ 18 │ :done │ 9256044632952509 │ "low_priority" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:14:19 │ 16:14:21 │ na │ 16:14:14 │ 1 year │ │ forever │ │ 19 │ :done │ 9256044633300673 │ "batch: 9" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:14:37 │ 16:14:39 │ na │ 16:14:14 │ 1 year │ │ forever │ │ 20 │ :done │ 9256044633510167 │ "dep: job_with_dep" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:14:47 │ 16:14:47 │ na │ 16:14:41 │ 1 year │ │ forever │ │ 21 │ :done │ 9256044632984150 │ "high_priority" │ "" │ 1.0 │ 0 B │ 0 │ [] │ 16:14:15 │ 16:14:17 │ na │ 16:14:14 │ 1 year │ │ forever │ │ 22 │ :done │ 9256044633021769 │ "mid_priority" │ "" │ 1.0 │ 0 B │ 15 │ [] │ 16:14:17 │ 16:14:19 │ na │ 16:14:14 │ 1 year │ │ forever │ │ 23 │ :done │ 9256044633145195 │ "batch: 4" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:14:27 │ 16:14:29 │ na │ 16:14:14 │ 1 year │ │ forever │ │ 24 │ :done │ 9256044633241947 │ "batch: 7" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:14:33 │ 16:14:35 │ na │ 16:14:14 │ 1 year │ │ forever │ │ 25 │ :done │ 9256044633574523 │ "dep: job_with_dep" │ "" │ 0.0 │ 0 B │ 20 │ [] │ 16:14:42 │ 16:14:42 │ na │ 16:14:42 │ 1 year │ │ forever │ │ 26 │ :done │ 9256044633444948 │ "dep: 2" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:14:44 │ 16:14:47 │ na │ 16:14:41 │ 1 year │ │ forever │ │ 27 │ :done │ 9256044633641245 │ "Command Program" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:16:36 │ 16:16:43 │ na │ 16:16:35 │ 1 year │ │ forever │ │ 28 │ :done │ 9256044633672167 │ "Command Program" │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:16:43 │ 16:16:43 │ na │ 16:16:35 │ 1 year │ │ forever │ │ 29 │ :done │ 9256044633730373 │ "Echo" │ "" │ 1.0 │ 0 B │ 10 │ [] │ 16:16:52 │ 16:16:54 │ na │ 16:16:52 │ 1 year │ │ forever │ │ 30 │ :done │ 9256044633759476 │ "cihga39871" │ "CJC" │ 0.5 │ 666 B │ 10 │ [] │ 16:16:56 │ 16:16:56 │ na │ 16:16:56 │ 1 year │ │ forever │ └─────┴────────────┴──────────────────┴──────────────────────┴───────┴──────┴───────┴──────────┴────────────┴────────────┴───────────┴───────────────┴─────────────┴───────────┴──────┴─────────┘ [ Info: scheduler_balance_check: wait_queue: terminal tests ┌ Info: Scheduler is running. │ SCHEDULER_MAX_CPU = 1 │ SCHEDULER_MAX_MEM = "28.8 GB" │ JOB_QUEUE.max_done = 10000 │ JOB_QUEUE.max_cancelled = 10000 │ SCHEDULER_TASK[] = Task (runnable, started) @0x000077892a25c880 └ SCHEDULER_REACTIVATION_TASK[] = Task (runnable, started) @0x000077892a25c970 --- Recur Job Start at 2025-08-12T16:17:25.365 --- Recur Job Start at 2025-08-12T16:17:26.121 --- Recur Job Start at 2025-08-12T16:17:27.085 4-element Vector{Job}: ┌─────┬────────────┬──────────────────┬──────────────────────┬──────┬──────┬─────┬──────────┬────────────┬────────────┬───────────┬───────────────┬─────────────┬───────────┬─────────┬─────────┐ │ Row │ state │ id │ name │ user │ ncpu │ mem │ priority │ dependency │ start_time │ stop_time │ schedule_time │ submit_time │ wall_time │ cron │ until │ ├─────┼────────────┼──────────────────┼──────────────────────┼──────┼──────┼─────┼──────────┼────────────┼────────────┼───────────┼───────────────┼─────────────┼───────────┼─────────┼─────────┤ │ 1 │ :cancelled │ 9256044633978609 │ "recur print date t… │ "" │ 1.0 │ 0 B │ 20 │ [] │ na │ 16:17:28 │ 16:17:28 │ 16:17:27 │ 1 year │ Defined │ forever │ │ 2 │ :done │ 9256044633882244 │ "recur print date t… │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:17:25 │ 16:17:25 │ 16:17:25 │ 16:17:24 │ 1 year │ Defined │ forever │ │ 3 │ :done │ 9256044633908383 │ "recur print date t… │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:17:26 │ 16:17:26 │ 16:17:26 │ 16:17:25 │ 1 year │ Defined │ forever │ │ 4 │ :done │ 9256044633942098 │ "recur print date t… │ "" │ 1.0 │ 0 B │ 20 │ [] │ 16:17:27 │ 16:17:27 │ 16:17:27 │ 16:17:26 │ 1 year │ Defined │ forever │ └─────┴────────────┴──────────────────┴──────────────────────┴──────┴──────┴─────┴──────────┴────────────┴────────────┴───────────┴───────────────┴─────────────┴───────────┴─────────┴─────────┘ [ Info: scheduler_balance_check: wait_queue: recur job tests ┌ Info: Scheduler is running. │ SCHEDULER_MAX_CPU = 1 │ SCHEDULER_MAX_MEM = "28.8 GB" │ JOB_QUEUE.max_done = 10000 │ JOB_QUEUE.max_cancelled = 10000 │ SCHEDULER_TASK[] = Task (runnable, started) @0x000077892a25c880 └ SCHEDULER_REACTIVATION_TASK[] = Task (runnable, started) @0x000077892a25c970 [ Info: scheduler_balance_check: wait_queue: macro @submit tests ┌ Info: Scheduler is running. │ SCHEDULER_MAX_CPU = 1 │ SCHEDULER_MAX_MEM = "28.8 GB" │ JOB_QUEUE.max_done = 10000 │ JOB_QUEUE.max_cancelled = 10000 │ SCHEDULER_TASK[] = Task (runnable, started) @0x000077892a25c880 └ SCHEDULER_REACTIVATION_TASK[] = Task (runnable, started) @0x000077892a25c970 Test Summary: | Pass Total Time JobSchedulers | 535 535 3m35.5s Testing JobSchedulers tests passed Testing completed after 183.25s PkgEval succeeded after 463.81s