Package evaluation of ChargeTransport on Julia 1.13.0-DEV.974 (7bbb213719*) started at 2025-08-13T01:01:08.208 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.76s ################################################################################ # Installation # Installing ChargeTransport... Resolving package versions... Installed ChargeTransport ─ v1.1.1 Updating `~/.julia/environments/v1.13/Project.toml` [25c3eafe] + ChargeTransport v1.1.1 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.16.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.19.0 [4c555306] + ArrayLayouts v1.11.2 [13072b0f] + AxisAlgorithms v1.1.0 [aae01518] + BandedMatrices v1.9.4 [e2ed5e7c] + Bijections v0.2.2 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [2a0fbf3d] + CPUSummary v0.2.7 [49dc2e85] + Calculus v0.5.2 [d360d2e6] + ChainRulesCore v1.26.0 [25c3eafe] + ChargeTransport v1.1.1 [fb6a15b2] + CloseOpenIntervals v0.1.13 [944b1d66] + CodecZlib v0.7.8 [35d6a980] + ColorSchemes v3.30.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 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Measurements v2.14.0 [e1d29d7a] + Missings v1.2.0 [2e0e35c7] + Moshi v0.3.7 [77ba4419] + NaNMath v1.1.3 [510215fc] + Observables v0.5.5 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [5ad8b20f] + PhysicalConstants v0.2.4 [f517fe37] + Polyester v0.7.18 [1d0040c9] + PolyesterWeave v0.2.2 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.5.0 [08abe8d2] + PrettyTables v2.4.0 [43287f4e] + PtrArrays v1.3.0 [c84ed2f1] + Ratios v0.4.5 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.37.0 [f2c3362d] + RecursiveFactorization v0.2.23 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [f2b01f46] + Roots v2.2.8 [7e49a35a] + RuntimeGeneratedFunctions v0.5.15 [94e857df] + SIMDTypes v0.1.0 [476501e8] + SLEEFPirates v0.6.43 [0bca4576] + SciMLBase v2.108.0 [c0aeaf25] + SciMLOperators v1.5.0 [53ae85a6] + SciMLStructures v1.7.0 [7e506255] + ScopedValues v1.4.0 [efcf1570] + Setfield v1.1.2 [699a6c99] + SimpleTraits v0.9.5 [a2af1166] + 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To see why use `status --outdated -m` Installation completed after 6.32s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 702.89s ################################################################################ # Testing # Testing ChargeTransport Status `/tmp/jl_IfOGjT/Project.toml` [4c88cf16] Aqua v0.8.14 [25c3eafe] ChargeTransport v1.1.1 [34da2185] Compat v4.18.0 [ffbed154] DocStringExtensions v0.9.5 [cfc395e8] ExtendableGrids v1.14.0 [f6369f11] ForwardDiff v1.0.1 [5eed8a63] GridVisualize v1.15.4 [a98d9a8b] Interpolations v0.16.1 [f29f6376] LessUnitful v1.2.1 [d330b81b] PyPlot v2.11.6 [f2b01f46] Roots v2.2.8 [57bfcd06] SimplexGridFactory v2.6.0 [f7e6ffb2] Triangulate v3.0.0 [82b139dc] VoronoiFVM v2.12.2 [de0858da] Printf v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_IfOGjT/Manifest.toml` [47edcb42] ADTypes v1.16.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [4c88cf16] Aqua v0.8.14 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.19.0 [4c555306] ArrayLayouts v1.11.2 [13072b0f] 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v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.2+0 [efcefdf7] PCRE2_jll v10.45.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ┌ Warning: Disabling allocation checks due to julia issue #58634 └ @ Main ~/.julia/packages/ChargeTransport/Orr7e/test/runtests.jl:20 Test Summary: | Pass Total Time Aqua.jl | 11 11 3m24.0s Directory /home/pkgeval/.julia/packages/ChargeTransport/Orr7e/test/../examples: Ex101_PIN: Precompiling packages... 15491.7 ms ✓ PyPlot 1 dependency successfully precompiled in 16 seconds. 40 already precompiled. [ Info: Installing matplotlib via the Conda matplotlib package... [ Info: Running `conda install -q -y matplotlib` in root environment Channels: - conda-forge Platform: linux-64 Collecting package metadata (repodata.json): ...working... done Solving environment: ...working... done ## Package Plan ## environment location: /home/pkgeval/.julia/conda/3/x86_64 added / updated specs: - matplotlib The following packages will be downloaded: package | build ---------------------------|----------------- alsa-lib-1.2.14 | hb9d3cd8_0 553 KB conda-forge brotli-1.1.0 | hb9d3cd8_3 19 KB conda-forge brotli-bin-1.1.0 | hb9d3cd8_3 19 KB conda-forge cairo-1.18.4 | h3394656_0 955 KB conda-forge contourpy-1.3.3 | py312hd9148b4_1 285 KB conda-forge cycler-0.12.1 | pyhd8ed1ab_1 13 KB conda-forge cyrus-sasl-2.1.28 | hd9c7081_0 205 KB conda-forge dbus-1.16.2 | h3c4dab8_0 428 KB conda-forge double-conversion-3.3.1 | h5888daf_0 68 KB conda-forge font-ttf-dejavu-sans-mono-2.37| hab24e00_0 388 KB conda-forge font-ttf-inconsolata-3.000 | h77eed37_0 94 KB conda-forge font-ttf-source-code-pro-2.038| h77eed37_0 684 KB conda-forge font-ttf-ubuntu-0.83 | h77eed37_3 1.5 MB conda-forge fontconfig-2.15.0 | h7e30c49_1 259 KB conda-forge fonts-conda-ecosystem-1 | 0 4 KB conda-forge fonts-conda-forge-1 | 0 4 KB conda-forge fonttools-4.59.0 | py312h8a5da7c_0 2.7 MB conda-forge freetype-2.13.3 | ha770c72_1 168 KB conda-forge graphite2-1.3.14 | hecca717_1 97 KB conda-forge harfbuzz-11.3.3 | hbb57e21_0 1.7 MB conda-forge kiwisolver-1.4.9 | py312h0a2e395_0 75 KB conda-forge lcms2-2.17 | h717163a_0 242 KB conda-forge lerc-4.0.0 | h0aef613_1 258 KB conda-forge libbrotlicommon-1.1.0 | hb9d3cd8_3 68 KB conda-forge libbrotlidec-1.1.0 | hb9d3cd8_3 32 KB conda-forge libbrotlienc-1.1.0 | hb9d3cd8_3 276 KB conda-forge libclang-cpp20.1-20.1.8 |default_hddf928d_0 20.3 MB conda-forge libclang13-20.1.8 |default_ha444ac7_0 11.8 MB conda-forge libcups-2.3.3 | hb8b1518_5 4.3 MB conda-forge libdeflate-1.24 | h86f0d12_0 71 KB conda-forge libdrm-2.4.125 | hb9d3cd8_0 240 KB conda-forge libegl-1.7.0 | ha4b6fd6_2 44 KB conda-forge libfreetype-2.13.3 | ha770c72_1 8 KB conda-forge libfreetype6-2.13.3 | h48d6fc4_1 371 KB conda-forge libgl-1.7.0 | ha4b6fd6_2 132 KB conda-forge libglib-2.84.3 | hf39c6af_0 3.8 MB conda-forge libglvnd-1.7.0 | ha4b6fd6_2 129 KB conda-forge libglx-1.7.0 | ha4b6fd6_2 74 KB conda-forge libjpeg-turbo-3.1.0 | hb9d3cd8_0 614 KB conda-forge libllvm20-20.1.8 | hecd9e04_0 41.9 MB conda-forge libntlm-1.8 | hb9d3cd8_0 33 KB conda-forge libopengl-1.7.0 | ha4b6fd6_2 50 KB conda-forge libpciaccess-0.18 | hb9d3cd8_0 28 KB conda-forge libpng-1.6.50 | h421ea60_1 310 KB conda-forge libpq-17.5 | h27ae623_0 2.6 MB conda-forge libtiff-4.7.0 | h8261f1e_6 423 KB conda-forge libwebp-base-1.6.0 | hd42ef1d_0 419 KB conda-forge libxcb-1.17.0 | h8a09558_0 387 KB conda-forge libxkbcommon-1.11.0 | he8b52b9_0 773 KB conda-forge libxslt-1.1.43 | h7a3aeb2_0 239 KB conda-forge matplotlib-3.10.5 | py312h7900ff3_0 17 KB conda-forge matplotlib-base-3.10.5 | py312he3d6523_0 7.7 MB conda-forge munkres-1.1.4 | pyhd8ed1ab_1 15 KB conda-forge openjpeg-2.5.3 | h55fea9a_1 349 KB conda-forge openldap-2.6.10 | he970967_0 762 KB conda-forge pcre2-10.45 | hc749103_0 1.1 MB conda-forge pillow-11.3.0 | py312h80c1187_0 41.0 MB conda-forge pixman-0.46.4 | h54a6638_1 440 KB conda-forge pthread-stubs-0.4 | hb9d3cd8_1002 8 KB conda-forge pyparsing-3.2.3 | pyhe01879c_2 100 KB conda-forge pyside6-6.9.1 | py312hdb827e4_0 9.7 MB conda-forge python-dateutil-2.9.0.post0| pyhe01879c_2 228 KB conda-forge qhull-2020.2 | h434a139_5 540 KB conda-forge qt6-main-6.9.1 | h6ac528c_2 50.6 MB conda-forge six-1.17.0 | pyhe01879c_1 18 KB conda-forge tornado-6.5.2 | py312h4c3975b_0 831 KB conda-forge unicodedata2-16.0.0 | py312h66e93f0_0 395 KB conda-forge wayland-1.24.0 | h3e06ad9_0 323 KB conda-forge xcb-util-0.4.1 | h4f16b4b_2 20 KB conda-forge xcb-util-cursor-0.1.5 | hb9d3cd8_0 20 KB conda-forge xcb-util-image-0.4.0 | hb711507_2 24 KB conda-forge xcb-util-keysyms-0.4.1 | hb711507_0 14 KB conda-forge xcb-util-renderutil-0.3.10 | hb711507_0 17 KB conda-forge xcb-util-wm-0.4.2 | hb711507_0 50 KB conda-forge xkeyboard-config-2.45 | hb9d3cd8_0 383 KB conda-forge xorg-libice-1.1.2 | hb9d3cd8_0 57 KB conda-forge xorg-libsm-1.2.6 | he73a12e_0 27 KB conda-forge xorg-libx11-1.8.12 | h4f16b4b_0 816 KB conda-forge xorg-libxau-1.0.12 | hb9d3cd8_0 14 KB conda-forge xorg-libxcomposite-0.4.6 | hb9d3cd8_2 13 KB conda-forge xorg-libxcursor-1.2.3 | hb9d3cd8_0 32 KB conda-forge xorg-libxdamage-1.1.6 | hb9d3cd8_0 13 KB conda-forge xorg-libxdmcp-1.1.5 | hb9d3cd8_0 19 KB conda-forge xorg-libxext-1.3.6 | hb9d3cd8_0 49 KB conda-forge xorg-libxfixes-6.0.1 | hb9d3cd8_0 19 KB conda-forge xorg-libxi-1.8.2 | hb9d3cd8_0 46 KB conda-forge xorg-libxrandr-1.5.4 | hb9d3cd8_0 29 KB conda-forge xorg-libxrender-0.9.12 | hb9d3cd8_0 32 KB conda-forge xorg-libxtst-1.2.5 | hb9d3cd8_3 32 KB conda-forge xorg-libxxf86vm-1.1.6 | hb9d3cd8_0 17 KB conda-forge ------------------------------------------------------------ Total: 215.7 MB The following NEW packages will be INSTALLED: alsa-lib conda-forge/linux-64::alsa-lib-1.2.14-hb9d3cd8_0 brotli conda-forge/linux-64::brotli-1.1.0-hb9d3cd8_3 brotli-bin conda-forge/linux-64::brotli-bin-1.1.0-hb9d3cd8_3 cairo conda-forge/linux-64::cairo-1.18.4-h3394656_0 contourpy conda-forge/linux-64::contourpy-1.3.3-py312hd9148b4_1 cycler conda-forge/noarch::cycler-0.12.1-pyhd8ed1ab_1 cyrus-sasl conda-forge/linux-64::cyrus-sasl-2.1.28-hd9c7081_0 dbus conda-forge/linux-64::dbus-1.16.2-h3c4dab8_0 double-conversion conda-forge/linux-64::double-conversion-3.3.1-h5888daf_0 font-ttf-dejavu-s~ conda-forge/noarch::font-ttf-dejavu-sans-mono-2.37-hab24e00_0 font-ttf-inconsol~ conda-forge/noarch::font-ttf-inconsolata-3.000-h77eed37_0 font-ttf-source-c~ conda-forge/noarch::font-ttf-source-code-pro-2.038-h77eed37_0 font-ttf-ubuntu conda-forge/noarch::font-ttf-ubuntu-0.83-h77eed37_3 fontconfig conda-forge/linux-64::fontconfig-2.15.0-h7e30c49_1 fonts-conda-ecosy~ conda-forge/noarch::fonts-conda-ecosystem-1-0 fonts-conda-forge conda-forge/noarch::fonts-conda-forge-1-0 fonttools conda-forge/linux-64::fonttools-4.59.0-py312h8a5da7c_0 freetype conda-forge/linux-64::freetype-2.13.3-ha770c72_1 graphite2 conda-forge/linux-64::graphite2-1.3.14-hecca717_1 harfbuzz conda-forge/linux-64::harfbuzz-11.3.3-hbb57e21_0 kiwisolver conda-forge/linux-64::kiwisolver-1.4.9-py312h0a2e395_0 lcms2 conda-forge/linux-64::lcms2-2.17-h717163a_0 lerc conda-forge/linux-64::lerc-4.0.0-h0aef613_1 libbrotlicommon conda-forge/linux-64::libbrotlicommon-1.1.0-hb9d3cd8_3 libbrotlidec conda-forge/linux-64::libbrotlidec-1.1.0-hb9d3cd8_3 libbrotlienc conda-forge/linux-64::libbrotlienc-1.1.0-hb9d3cd8_3 libclang-cpp20.1 conda-forge/linux-64::libclang-cpp20.1-20.1.8-default_hddf928d_0 libclang13 conda-forge/linux-64::libclang13-20.1.8-default_ha444ac7_0 libcups conda-forge/linux-64::libcups-2.3.3-hb8b1518_5 libdeflate conda-forge/linux-64::libdeflate-1.24-h86f0d12_0 libdrm conda-forge/linux-64::libdrm-2.4.125-hb9d3cd8_0 libegl conda-forge/linux-64::libegl-1.7.0-ha4b6fd6_2 libfreetype conda-forge/linux-64::libfreetype-2.13.3-ha770c72_1 libfreetype6 conda-forge/linux-64::libfreetype6-2.13.3-h48d6fc4_1 libgl conda-forge/linux-64::libgl-1.7.0-ha4b6fd6_2 libglib conda-forge/linux-64::libglib-2.84.3-hf39c6af_0 libglvnd conda-forge/linux-64::libglvnd-1.7.0-ha4b6fd6_2 libglx conda-forge/linux-64::libglx-1.7.0-ha4b6fd6_2 libjpeg-turbo conda-forge/linux-64::libjpeg-turbo-3.1.0-hb9d3cd8_0 libllvm20 conda-forge/linux-64::libllvm20-20.1.8-hecd9e04_0 libntlm conda-forge/linux-64::libntlm-1.8-hb9d3cd8_0 libopengl conda-forge/linux-64::libopengl-1.7.0-ha4b6fd6_2 libpciaccess conda-forge/linux-64::libpciaccess-0.18-hb9d3cd8_0 libpng conda-forge/linux-64::libpng-1.6.50-h421ea60_1 libpq conda-forge/linux-64::libpq-17.5-h27ae623_0 libtiff conda-forge/linux-64::libtiff-4.7.0-h8261f1e_6 libwebp-base conda-forge/linux-64::libwebp-base-1.6.0-hd42ef1d_0 libxcb conda-forge/linux-64::libxcb-1.17.0-h8a09558_0 libxkbcommon conda-forge/linux-64::libxkbcommon-1.11.0-he8b52b9_0 libxslt conda-forge/linux-64::libxslt-1.1.43-h7a3aeb2_0 matplotlib conda-forge/linux-64::matplotlib-3.10.5-py312h7900ff3_0 matplotlib-base conda-forge/linux-64::matplotlib-base-3.10.5-py312he3d6523_0 munkres conda-forge/noarch::munkres-1.1.4-pyhd8ed1ab_1 openjpeg conda-forge/linux-64::openjpeg-2.5.3-h55fea9a_1 openldap conda-forge/linux-64::openldap-2.6.10-he970967_0 pcre2 conda-forge/linux-64::pcre2-10.45-hc749103_0 pillow conda-forge/linux-64::pillow-11.3.0-py312h80c1187_0 pixman conda-forge/linux-64::pixman-0.46.4-h54a6638_1 pthread-stubs conda-forge/linux-64::pthread-stubs-0.4-hb9d3cd8_1002 pyparsing conda-forge/noarch::pyparsing-3.2.3-pyhe01879c_2 pyside6 conda-forge/linux-64::pyside6-6.9.1-py312hdb827e4_0 python-dateutil conda-forge/noarch::python-dateutil-2.9.0.post0-pyhe01879c_2 qhull conda-forge/linux-64::qhull-2020.2-h434a139_5 qt6-main conda-forge/linux-64::qt6-main-6.9.1-h6ac528c_2 six conda-forge/noarch::six-1.17.0-pyhe01879c_1 tornado conda-forge/linux-64::tornado-6.5.2-py312h4c3975b_0 unicodedata2 conda-forge/linux-64::unicodedata2-16.0.0-py312h66e93f0_0 wayland conda-forge/linux-64::wayland-1.24.0-h3e06ad9_0 xcb-util conda-forge/linux-64::xcb-util-0.4.1-h4f16b4b_2 xcb-util-cursor conda-forge/linux-64::xcb-util-cursor-0.1.5-hb9d3cd8_0 xcb-util-image conda-forge/linux-64::xcb-util-image-0.4.0-hb711507_2 xcb-util-keysyms conda-forge/linux-64::xcb-util-keysyms-0.4.1-hb711507_0 xcb-util-renderut~ conda-forge/linux-64::xcb-util-renderutil-0.3.10-hb711507_0 xcb-util-wm conda-forge/linux-64::xcb-util-wm-0.4.2-hb711507_0 xkeyboard-config conda-forge/linux-64::xkeyboard-config-2.45-hb9d3cd8_0 xorg-libice conda-forge/linux-64::xorg-libice-1.1.2-hb9d3cd8_0 xorg-libsm conda-forge/linux-64::xorg-libsm-1.2.6-he73a12e_0 xorg-libx11 conda-forge/linux-64::xorg-libx11-1.8.12-h4f16b4b_0 xorg-libxau conda-forge/linux-64::xorg-libxau-1.0.12-hb9d3cd8_0 xorg-libxcomposite conda-forge/linux-64::xorg-libxcomposite-0.4.6-hb9d3cd8_2 xorg-libxcursor conda-forge/linux-64::xorg-libxcursor-1.2.3-hb9d3cd8_0 xorg-libxdamage conda-forge/linux-64::xorg-libxdamage-1.1.6-hb9d3cd8_0 xorg-libxdmcp conda-forge/linux-64::xorg-libxdmcp-1.1.5-hb9d3cd8_0 xorg-libxext conda-forge/linux-64::xorg-libxext-1.3.6-hb9d3cd8_0 xorg-libxfixes conda-forge/linux-64::xorg-libxfixes-6.0.1-hb9d3cd8_0 xorg-libxi conda-forge/linux-64::xorg-libxi-1.8.2-hb9d3cd8_0 xorg-libxrandr conda-forge/linux-64::xorg-libxrandr-1.5.4-hb9d3cd8_0 xorg-libxrender conda-forge/linux-64::xorg-libxrender-0.9.12-hb9d3cd8_0 xorg-libxtst conda-forge/linux-64::xorg-libxtst-1.2.5-hb9d3cd8_3 xorg-libxxf86vm conda-forge/linux-64::xorg-libxxf86vm-1.1.6-hb9d3cd8_0 Preparing transaction: ...working... done Verifying transaction: ...working... done Executing transaction: ...working... done Precompiling packages... 7824.2 ms ✓ SciMLBase → SciMLBasePyCallExt 1 dependency successfully precompiled in 9 seconds. 79 already precompiled. Precompiling packages... 10563.2 ms ✓ GridVisualize → GridVisualizePyPlotExt 1 dependency successfully precompiled in 12 seconds. 118 already precompiled. Ex102_PIN_nodal_doping: Ex103_PSC_IVMeasurement: Ex104_PSC_Photogeneration: Ex105_PSC_gradedFlux: Ex106_PSC_SurfaceRecombination: Ex107_MoS2_withIons_BarrierLowering: Sparsity preparation for generic operator: 4.329537731 s WARNING: Problem at t=4.279, Δt=0.05: VoronoiFVM.ConvergenceError() WARNING: Problem at t=4.4326, Δt=0.033502: VoronoiFVM.ConvergenceError() WARNING: Problem at t=4.5354, Δt=0.022448: VoronoiFVM.ConvergenceError() WARNING: ErrorException("trying to assemble NaN") WARNING: Problem at t=9.3072, Δt=0.05: VoronoiFVM.AssemblyError() WARNING: Problem at t=9.4273, Δt=0.031907: VoronoiFVM.ConvergenceError() Ex108_CIGS: Ex109_PSC_NonDimensional: Ex201_PSC_tensorGrid: Ex202_Laser_simple: Test Summary: | Total Time Examples | 0 13m37.7s Directory /home/pkgeval/.julia/packages/ChargeTransport/Orr7e/test/../examples: PSC_2D_unstructuredGrid: Precompiling packages... 11096.3 ms ✓ MeshIO 14948.1 ms ✓ SimplexGridFactory 2 dependencies successfully precompiled in 28 seconds. 111 already precompiled. Precompiling packages... 1784.4 ms ✓ Triangulate 1 dependency successfully precompiled in 2 seconds. 31 already precompiled. Precompiling packages... 5134.0 ms ✓ ExtendableGrids → ExtendableGridsTriangulateExt 1 dependency successfully precompiled in 6 seconds. 81 already precompiled. PSC_3D: Test Summary: | Total Time PSC | 0 4m20.9s 1078.671412 seconds (515.38 M allocations: 23.511 GiB, 1.12% gc time, 63.29% compilation time: 1% of which was recompilation) Testing ChargeTransport tests passed Testing completed after 1303.48s PkgEval succeeded after 2079.22s