Package evaluation of BioSimplex on Julia 1.13.0-DEV.971 (04e26c5eae*) started at 2025-08-12T12:06:55.994 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.16s ################################################################################ # Installation # Installing BioSimplex... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [f37aa7dd] + BioSimplex v0.2.0 Updating `~/.julia/environments/v1.13/Manifest.toml` [7e6ae17a] + BioSequences v3.5.0 [f37aa7dd] + BioSimplex v0.2.0 [3c28c6f8] + BioSymbols v5.2.0 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.5.0 [7200193e] + Twiddle v1.1.2 [ade2ca70] + Dates v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [fa267f1f] + TOML v1.0.3 [4ec0a83e] + Unicode v1.11.0 Installation completed after 3.9s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 19.13s ################################################################################ # Testing # Testing BioSimplex Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_hP6tkL/Project.toml` [4c88cf16] ↑ Aqua v0.8.4 ⇒ v0.8.14 [7e6ae17a] ↑ BioSequences v3.1.6 ⇒ v3.5.0 [f37aa7dd] + BioSimplex v0.2.0 [8dfed614] ~ Test ⇒ v1.11.0 Updating `/tmp/jl_hP6tkL/Manifest.toml` [4c88cf16] ↑ Aqua v0.8.4 ⇒ v0.8.14 [7e6ae17a] ↑ BioSequences v3.1.6 ⇒ v3.5.0 [f37aa7dd] + BioSimplex v0.2.0 [3c28c6f8] ↑ BioSymbols v5.1.3 ⇒ v5.2.0 [34da2185] ↑ Compat v4.12.0 ⇒ v4.18.0 [aea7be01] ↑ PrecompileTools v1.2.0 ⇒ v1.3.2 [21216c6a] ↑ Preferences v1.4.1 ⇒ v1.5.0 [c8ffd9c3] - MbedTLS_jll v2.28.2+1 [0dad84c5] ↑ ArgTools v1.1.1 ⇒ v1.1.2 [56f22d72] ~ Artifacts ⇒ v1.11.0 [2a0f44e3] ~ Base64 ⇒ v1.11.0 [ade2ca70] ~ Dates ⇒ v1.11.0 [f43a241f] ↑ Downloads v1.6.0 ⇒ v1.7.0 [7b1f6079] ~ FileWatching ⇒ v1.11.0 [b77e0a4c] ~ InteractiveUtils ⇒ v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [76f85450] ~ LibGit2 ⇒ v1.11.0 [8f399da3] ~ Libdl ⇒ v1.11.0 [56ddb016] ~ Logging ⇒ v1.11.0 [d6f4376e] ~ Markdown ⇒ v1.11.0 [ca575930] ↑ NetworkOptions v1.2.0 ⇒ v1.3.0 [44cfe95a] ↑ Pkg v1.10.0 ⇒ v1.13.0 [de0858da] ~ Printf ⇒ v1.11.0 [3fa0cd96] - REPL [9a3f8284] ~ Random ⇒ v1.11.0 [9e88b42a] ~ Serialization ⇒ v1.11.0 [6462fe0b] - Sockets [f489334b] + StyledStrings v1.11.0 [8dfed614] ~ Test ⇒ v1.11.0 [cf7118a7] ~ UUIDs ⇒ v1.11.0 [4ec0a83e] ~ Unicode ⇒ v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] ↑ LibCURL_jll v8.4.0+0 ⇒ v8.15.0+1 [e37daf67] ↑ LibGit2_jll v1.6.4+0 ⇒ v1.9.1+0 [29816b5a] ↑ LibSSH2_jll v1.11.0+1 ⇒ v1.11.3+1 [14a3606d] ↑ MozillaCACerts_jll v2023.1.10 ⇒ v2025.7.15 [458c3c95] + OpenSSL_jll v3.5.1+0 [efcefdf7] + PCRE2_jll v10.45.0+0 [83775a58] ↑ Zlib_jll v1.2.13+1 ⇒ v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850ede] ↑ nghttp2_jll v1.52.0+1 ⇒ v1.65.0+0 [3f19e933] ↑ p7zip_jll v17.4.0+2 ⇒ v17.5.0+2 Test Successfully re-resolved Status `/tmp/jl_hP6tkL/Project.toml` [4c88cf16] Aqua v0.8.14 [7e6ae17a] BioSequences v3.5.0 [f37aa7dd] BioSimplex v0.2.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_hP6tkL/Manifest.toml` [4c88cf16] Aqua v0.8.14 [7e6ae17a] BioSequences v3.5.0 [f37aa7dd] BioSimplex v0.2.0 [3c28c6f8] BioSymbols v5.2.0 [34da2185] Compat v4.18.0 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.5.0 [7200193e] Twiddle v1.1.2 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.7.15 [458c3c95] OpenSSL_jll v3.5.1+0 [efcefdf7] PCRE2_jll v10.45.0+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Testing Running tests... Test Summary: | Total Time biosimplex | 0 0.0s Test Summary: | Pass Total Time Aqua | 6 6 42.0s Testing BioSimplex tests passed Testing completed after 53.27s PkgEval succeeded after 96.86s