Package evaluation of ApproxManifoldProducts on Julia 1.13.0-DEV.974 (7bbb213719*) started at 2025-08-13T01:55:54.579 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 11.77s ################################################################################ # Installation # Installing ApproxManifoldProducts... Resolving package versions... Installed CompositionsBase ──────────── v0.1.2 Installed DiffResults ───────────────── v1.1.0 Installed MacroTools ────────────────── v0.5.16 Installed ForwardDiff ───────────────── v1.0.1 Installed StridedViews ──────────────── v0.4.1 Installed Quaternions ───────────────── v0.7.6 Installed DataStructures ────────────── v0.18.22 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed Adapt ─────────────────────── v4.3.0 Installed ConstructionBase ──────────── v1.6.0 Installed RuntimeGeneratedFunctions ─── v0.5.15 Installed FillArrays ────────────────── v1.13.0 Installed HypergeometricFunctions ───── v0.3.28 Installed TransformUtils ────────────── v0.2.19 Installed DelimitedFiles ────────────── v1.9.1 Installed AliasTables ───────────────── v1.1.3 Installed ArnoldiMethod ─────────────── v0.4.0 Installed StatsBase ─────────────────── v0.34.6 Installed ManifoldDiff ──────────────── v0.4.4 Installed LinearMaps ────────────────── v3.11.4 Installed SymbolicIndexingInterface ─── v0.3.42 Installed Optim ─────────────────────── v1.13.2 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed ExprTools ─────────────────── v0.1.10 Installed RecipesBase ───────────────── v1.3.4 Installed Compat ────────────────────── v4.18.0 Installed OrderedCollections ────────── v1.8.1 Installed ArrayInterface ────────────── v7.19.0 Installed TensorCast ────────────────── v0.4.9 Installed PositiveFactorizations ────── v0.2.4 Installed StatsAPI ──────────────────── v1.7.1 Installed DataAPI ───────────────────── v1.16.0 Installed SimpleWeightedGraphs ──────── v1.5.0 Installed Statistics ────────────────── v1.11.1 Installed PrecompileTools ───────────── v1.3.2 Installed Manifolds ─────────────────── v0.10.23 Installed DataValueInterfaces ───────── v1.0.0 Installed StaticArraysCore ──────────── v1.4.3 Installed CommonSubexpressions ──────── v0.3.1 Installed CoordinateTransformations ─── v0.6.4 Installed RealDot ───────────────────── v0.1.0 Installed Colors ────────────────────── v0.13.1 Installed TransmuteDims ─────────────── v0.1.17 Installed StaticArrays ──────────────── v1.9.14 Installed IrrationalConstants ───────── v0.2.4 Installed GPUArraysCore ─────────────── v0.2.0 Installed Distances ─────────────────── v0.10.12 Installed TupleTools ────────────────── v1.6.0 Installed ChainRulesCore ────────────── v1.26.0 Installed NamedDims ─────────────────── v1.2.3 Installed QuadGK ────────────────────── v2.11.2 Installed NaNMath ───────────────────── v1.1.3 Installed StringManipulation ────────── v0.4.1 Installed ColorTypes ────────────────── v0.12.1 Installed Requires ──────────────────── v1.3.1 Installed SimpleTraits ──────────────── v0.9.5 Installed KernelDensityEstimate ─────── v0.5.13 Installed NLsolve ───────────────────── v4.5.1 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed DiffRules ─────────────────── v1.15.1 Installed PackageExtensionCompat ────── v1.0.2 Installed LogExpFunctions ───────────── v0.3.29 Installed Einsum ────────────────────── v0.4.1 Installed FiniteDiff ────────────────── v2.27.0 Installed Rmath ─────────────────────── v0.8.0 Installed Parameters ────────────────── v0.12.3 Installed StatsFuns ─────────────────── v1.5.0 Installed PrettyTables ──────────────── v2.4.0 Installed Tables ────────────────────── v1.12.1 Installed PtrArrays ─────────────────── v1.3.0 Installed EnumX ─────────────────────── v1.0.5 Installed ManifoldsBase ─────────────── v1.2.0 Installed NLSolversBase ─────────────── v7.10.0 Installed Distributions ─────────────── v0.25.120 Installed Reexport ──────────────────── v1.2.2 Installed InverseFunctions ──────────── v0.1.17 Installed SpecialFunctions ──────────── v2.5.1 Installed Missings ──────────────────── v1.2.0 Installed Setfield ──────────────────── v1.1.2 Installed FixedPointNumbers ─────────── v0.8.5 Installed Preferences ───────────────── v1.5.0 Installed JLLWrappers ───────────────── v1.7.1 Installed TableTraits ───────────────── v1.0.1 Installed Rotations ─────────────────── v1.7.1 Installed MatrixEquations ───────────── v2.4.2 Installed LineSearches ──────────────── v7.4.0 Installed LazyStack ─────────────────── v0.1.3 Installed LaTeXStrings ──────────────── v1.4.0 Installed PDMats ────────────────────── v0.11.35 Installed SortingAlgorithms ─────────── v1.2.2 Installed Crayons ───────────────────── v4.1.1 Installed RecursiveArrayTools ───────── v3.37.0 Installed UnPack ────────────────────── v1.0.2 Installed Kronecker ─────────────────── v0.5.5 Installed ADTypes ───────────────────── v1.16.0 Installed DocStringExtensions ───────── v0.9.5 Installed ApproxManifoldProducts ────── v0.9.1 Installed Inflate ───────────────────── v0.1.5 Installed Graphs ────────────────────── v1.13.0 Installed DifferentiationInterface ──── v0.7.4 Installed Strided ───────────────────── v2.3.2 Installed Accessors ─────────────────── v0.1.42 Installing 2 artifacts Installed artifact Rmath 121.9 KiB Installed artifact OpenSpecFun 194.9 KiB Updating `~/.julia/environments/v1.13/Project.toml` [9bbbb610] + ApproxManifoldProducts v0.9.1 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.16.0 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [9bbbb610] + ApproxManifoldProducts v0.9.1 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.19.0 [d360d2e6] + ChainRulesCore v1.26.0 [3da002f7] + ColorTypes v0.12.1 [5ae59095] + Colors v0.13.1 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.18.0 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 [150eb455] + CoordinateTransformations v0.6.4 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.4 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions 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To see why use `status --outdated -m` Installation completed after 12.74s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4758.6 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. Precompiling package dependencies... Precompilation completed after 617.99s ################################################################################ # Testing # Testing ApproxManifoldProducts Status `/tmp/jl_1SxY4H/Project.toml` [9bbbb610] ApproxManifoldProducts v0.9.1 [fbb218c0] BSON v0.3.9 [5ae59095] Colors v0.13.1 [150eb455] CoordinateTransformations v0.6.4 [a93c6f00] DataFrames v1.7.0 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.5 [0f8b85d8] JSON3 v1.14.3 [2472808a] KernelDensityEstimate v0.5.13 [1cead3c2] Manifolds v0.10.23 [3362f125] ManifoldsBase v1.2.0 [2774e3e8] NLsolve v4.5.1 [429524aa] Optim v1.13.2 [731186ca] RecursiveArrayTools v3.37.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [6038ab10] Rotations v1.7.1 [90137ffa] StaticArrays v1.9.14 [10745b16] Statistics v1.11.1 [02d47bb6] TensorCast v0.4.9 [9b8138ad] TransformUtils v0.2.19 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 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Testing Running tests... Test Summary: | Pass Total Time test circular difftheta... | 18 18 2.5s Test Summary: | Pass Total Time test circular manifold BallTree construction small positive... | 16 16 8.6s Test Summary: | Pass Total Time test circular manifold BallTree construction small negative... | 16 16 0.1s Test Summary: | Pass Total Time test circular manifold BallTree construction around 0rad... | 16 16 0.0s Test Summary: | Pass Total Time test circular manifold BallTree construction around π wrap point... | 7 7 0.0s Test Summary: | Pass Total Time basic linear 1D find mu and Lambdas Gaussian product test... | 2 2 28.8s Test Summary: | Pass Total Time test 1D with 3 components on basic Euclidean line... | 2 2 0.0s Test Summary: | Pass Total Time Test SO2 wrap around minimization Gaussian means... | 9 9 11.4s Test Summary: | Pass Total Time basic linear 2D Rotation find mu and Lambdas Gaussian product test... | 8 8 1.1s ┌ Warning: SpecialEuclidean will move to LieGroups.jl and be renamed to SpecialEuclideanGroup. │ caller = ip:0x0 └ @ Core :-1 ┌ Warning: TranslationGroup will move to LieGroups.jl. │ caller = ip:0x0 └ @ Core :-1 ┌ Warning: SpecialOrthogonal will move to LieGroups.jl and be renamed to SpecialOrthogonalGroup. │ caller = ip:0x0 └ @ Core :-1 ┌ Warning: SemidirectProductGroup will move to LieGroups.jl and be renamed to LeftSemidirectProductLieGroup. │ caller = ip:0x0 └ @ Core :-1 ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element(G::GroupManifold{ℝ, ProductManifold{ℝ, Tuple{TranslationGroup{ManifoldsBase.TypeParameter{Tuple{2}}, ℝ}, SpecialOrthogonal{ManifoldsBase.TypeParameter{Tuple{2}}}}}, Manifolds.SemidirectProductOperation{RotationAction{LeftAction, TranslationGroup{ManifoldsBase.TypeParameter{Tuple{2}}, ℝ}, SpecialOrthogonal{ManifoldsBase.TypeParameter{Tuple{2}}}}}, HybridTangentRepresentation}) at nested_trait.jl:306 └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 Test Summary: | Pass Total Time test Manifolds.jl conventions | 10 10 9.3s ┌ Warning: GroupManifold functionality will move to its own package `LieGroups.jl`. │ │ `Identity` will move and keep its name. │ caller = ip:0x0 └ @ Core :-1 ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 ┌ Error: Missing SO(2) vector transport numerical verify tests └ @ Main ~/.julia/packages/ApproxManifoldProducts/CjeCO/test/testLieFundamentals.jl:54 Test Summary: | Pass Total Time SO(2) Vector transport (w curvature) via Jacobians and Lie adjoints | 3 3 2.6s ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 ┌ Warning: The function exp_lie! will move to LieGroups.jl and be renamed to exp!. │ caller = ip:0x0 └ @ Core :-1 ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 ┌ Warning: TODO find Manifolds operation equivalent to Mahony 2024, perhaps `vector_transport_along`? └ @ Main ~/.julia/packages/ApproxManifoldProducts/CjeCO/test/testLieFundamentals.jl:171 Test Summary: | Pass Total Time SO(3) Vector transport (w curvature) via Jacobians and Lie adjoints | 10 10 15.2s ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 ┌ Error: Missing SE(2) vector transport numerical verify tests └ @ Main ~/.julia/packages/ApproxManifoldProducts/CjeCO/test/testLieFundamentals.jl:213 Test Summary: | Pass Total Time SE(2) Vector transport (w curvature) via Jacobians and Lie adjoints | 2 2 4.1s ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 ┌ Error: Missing SE(3) vector transport numerical verify tests └ @ Main ~/.julia/packages/ApproxManifoldProducts/CjeCO/test/testLieFundamentals.jl:247 Test Summary: | Pass Total Time SE(3) Vector transport (w curvature) via Jacobians and Lie adjoints | 1 1 3.5s ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 ┌ Warning: The function log_lie will move to LieGroups.jl and be renamed to log. │ caller = log_lie at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 ┌ Warning: The function log_lie will move to LieGroups.jl and be renamed to log. │ caller = log_lie at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 Test Summary: | Pass Total Time (Lie Group) on-manifold Gaussian product SO(3), [Ge, van Goor, Mahony, 2024] | 4 4 1m18.2s ┌ Warning: The function log_lie will move to LieGroups.jl and be renamed to log. │ caller = log_lie(G::GroupManifold{ℝ, ProductManifold{ℝ, Tuple{TranslationGroup{ManifoldsBase.TypeParameter{Tuple{2}}, ℝ}, SpecialOrthogonal{ManifoldsBase.TypeParameter{Tuple{2}}}}}, Manifolds.SemidirectProductOperation{RotationAction{LeftAction, TranslationGroup{ManifoldsBase.TypeParameter{Tuple{2}}, ℝ}, SpecialOrthogonal{ManifoldsBase.TypeParameter{Tuple{2}}}}}, LeftInvariantRepresentation}, q::ArrayPartition{Float64, Tuple{Vector{Float64}, Matrix{Float64}}}) at nested_trait.jl:306 └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 ┌ Warning: The function log_lie! will move to LieGroups.jl and be renamed to log!. │ caller = log_lie! at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 Test Summary: | Pass Total Time test getManifoldPartial on Euclidean(N) | 6 6 2.2s Test Summary: | Pass Total Time test getManifoldPartial on Circle() | 4 4 2.0s Test Summary: | Pass Total Time test getManifoldPartial on Rotations(2) | 4 4 1.5s Test Summary: | Pass Total Time test getManifoldPartial on SpecialEuclidean(2; vectors=HybridTangentRepresentation()) | 20 20 6.7s ┌ Error: Must fix Sphere(2) partial test └ @ Main ~/.julia/packages/ApproxManifoldProducts/CjeCO/test/testManifoldPartial.jl:108 Test Summary: | Broken Total Time Reminder, getManifoldPartial on Sphere(2) [TBD] | 1 1 0.1s Test Summary: | Pass Broken Total Time test getPoints under partial with representation | 2 1 3 14.6s Test Summary: | Pass Broken Total Time test marginal of marginal (partial) helper | 75 1 76 5.3s Test Summary: | Pass Total Time test replace overloads full and partial/marginal | 49 49 6.1s Test Summary: | Pass Broken Total Time multiply big and small | 5 2 7 17.7s Test Summary: | Pass Total Time Basic 3D multiply and cross dimension covariance test... | 7 7 10.8s Test Summary: | Pass Total Time test calcProductGaussians | 2 2 8.3s Test Summary: | Pass Total Time comparison test with basic product | 12 12 12.8s Test Summary: | Pass Total Time test dim=2 product with one partial/marginal | 103 103 9.0s Test Summary: | Pass Total Time test dim=2 product with one full and two similar marginals | 103 103 1.0s Test Summary: | Pass Total Time test dim=2 product with one full and two different marginals | 103 103 2.0s Test Summary: | Pass Total Time product of only one marginal per each of two dimensions | 103 103 5.8s Test Summary: | Pass Total Time test dim=2 product of only marginals, two per dimension, 4 factors total | 101 101 1.8s Test Summary: | Pass Total Time test dim=3 product with one full and two different marginals | 153 153 29.1s Test Summary: | Pass Total Time test dim=3 product with one full and two different marginals (marginal first in product) | 153 153 0.9s Test Summary: | Pass Total Time test dim=3 product with two different marginals and one open dimension | 104 104 6.5s Test Summary: | Pass Total Time Test mmd distance between Euclidean beliefs | 1 1 6.5s Test Summary: | Pass Total Time Test mmd distance between 2D Euclidean beliefs | 1 1 0.6s ┌ Warning: The function inv will move to LieGroups.jl. │ caller = inv at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 Test Summary: | Pass Broken Total Time partial product with a SpecialEuclidean(2; vectors=HybridTangentRepresentation()) | 403 400 803 51.2s ManifoldKernelDensity{ M = GroupManifold{ℝ, ProductManifold{ℝ, Tuple{TranslationGroup{ManifoldsBase.TypeParameter{Tuple{3}}, ℝ}, SpecialOrthogonal{ManifoldsBase.TypeParameter{Tuple{3}}}}}, Manifolds.SemidirectProductOperation{RotationAction{LeftAction, TranslationGroup{ManifoldsBase.TypeParameter{Tuple{3}}, ℝ}, SpecialOrthogonal{ManifoldsBase.TypeParameter{Tuple{3}}}}}, HybridTangentRepresentation}, B = BallTreeDensity, L = Nothing, P = ArrayPartition{Float64, Tuple{SizedVector{3, Float64, Vector{Float64}}, Matrix{Float64}}} }( Npts: 50 dims: 6 prtl: nothing bws: [0.1733, 0.3001, 0.2884, 0.0124, 0.048, 0.0667] ipc: [1.0, 1.0, 1.0, 1.0, 1.0, 1.0] mean: ---- ) Test Summary: | Pass Total Time Test isapprox function on basic SpecialEuclidean(3; vectors=HybridTangentRepresentation()) | 10 10 12.6s Test Summary: | Pass Total Time test symmetry of Manifolds.distance | 4 4 4.6s Test Summary: | Pass Total Time test updating of beliefs | 3 3 2.5s Test Summary: | Pass Broken Total Time Test basic MKD statistics | 5 1 6 8.3s ┌ Warning: The function log_lie will move to LieGroups.jl and be renamed to log. │ caller = log_lie at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 _ax_ERR = (log_lie(SpecialOrthogonal(2), r_R_ax_' * r_R_ax))[1, 2] = 0.006260506885860059 testval = isapprox(0, _ax_ERR; atol = 8 / length(ax_CC)) = true ┌ Warning: The function log_lie will move to LieGroups.jl and be renamed to log. │ caller = log_lie(G::SpecialOrthogonal{ManifoldsBase.TypeParameter{Tuple{2}}}, q::Matrix{Float64}) at nested_trait.jl:306 └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 Test Summary: | Pass Total Time test ManellicTree construction | 4 4 40.3s Test Summary: | Pass Total Time ManellicTree construction 1D | 362 362 25.0s Test Summary: | Pass Total Time ManellicTree 1D basic construction and evaluations | 106 106 2m03.6s ┌ Warning: The function inv will move to LieGroups.jl. │ caller = inv at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 ┌ Warning: The function inv will move to LieGroups.jl. │ caller = inv(G::GroupManifold{ℝ, ProductManifold{ℝ, Tuple{TranslationGroup{ManifoldsBase.TypeParameter{Tuple{2}}, ℝ}, SpecialOrthogonal{ManifoldsBase.TypeParameter{Tuple{2}}}}}, Manifolds.SemidirectProductOperation{RotationAction{LeftAction, TranslationGroup{ManifoldsBase.TypeParameter{Tuple{2}}, ℝ}, SpecialOrthogonal{ManifoldsBase.TypeParameter{Tuple{2}}}}}, HybridTangentRepresentation}, p::ArrayPartition{Float64, Tuple{SizedVector{2, Float64, Vector{Float64}}, Matrix{Float64}}}) at nested_trait.jl:306 └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 Test Summary: | Pass Broken Total Time Test evaluate MvNormalKernel | 9 2 11 6.4s ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element(G::TranslationGroup{ManifoldsBase.TypeParameter{Tuple{1}}, ℝ}) at nested_trait.jl:306 └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element(G::SpecialOrthogonal{ManifoldsBase.TypeParameter{Tuple{2}}}) at nested_trait.jl:306 └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 y_pdf = 0.6349363593424094 ┌ Warning: soft test failure for approx function vs. true Normal density function evaluation └ @ Main ~/.julia/packages/ApproxManifoldProducts/CjeCO/test/manellic/testManifoldTreeConstr.jl:443 Test Summary: | Pass Broken Total Time Basic ManellicTree manifolds construction and evaluations | 2 1 3 4m37.0s ┌ Error: expectedLogL for different number of test points not working yet. └ @ Main ~/.julia/packages/ApproxManifoldProducts/CjeCO/test/manellic/testTreeEvaluation.jl:35 AMP.entropy(mtree) = Inf Test Summary: | Pass Total Time Manellic basic evaluation test 1D | 2 2 3.6s Test Summary: | Pass Total Time Manellic tree bandwidth evaluation | 4 4 4.2s Test Summary: | Pass Total Time Manellic tree kernel bandwidth 1D LOO evaluation/entropy checks | 3 3 1.4s best_cov = Optim.minimizer(res) = 0.31327753441542056 Test Summary: | Pass Total Time Manellic tree bandwidth optimization 1D section search | 4 4 34.1s best_cov = 0.49225247910143327 Test Summary: | Pass Broken Total Time Manellic tree all up construction with bandwith optimization | 1 1 2 10.4s 8.403079 seconds (12.55 M allocations: 483.761 MiB, 2.68% gc time, 72.91% compilation time) best_cov = abs.(Optim.minimizer(res)) = [0.37393308467129605, 0.48015892112368885] Test Summary: | Pass Total Time Multidimensional LOOCV bandwidth optimization, TranslationGroup(2) | 3 3 27.2s ┌ Warning: The function inv will move to LieGroups.jl. │ caller = inv at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 393.289675 seconds (149.18 M allocations: 9.981 GiB, 0.48% gc time, 0.74% compilation time) best_cov = abs.(Optim.minimizer(res)) = [0.6621091732566069, 0.4728598082063371, 0.0658469159390629] Test Summary: | Pass Total Time Multidimensional LOOCV bandwidth optimization, SpecialEuclidean(2; vectors=HybridTangentRepresentation()) | 5 5 14m57.0s ┌ Warning: The function inv will move to LieGroups.jl. │ caller = inv at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 834 running 1 of 1 signal (10): User defined signal 1 __safe_setindex! at ./array.jl:1019 [inlined] _push! at ./array.jl:1314 [inlined] push! at ./array.jl:1310 [inlined] _reformat_bt at ./error.jl:89 backtrace at ./error.jl:125 macro expansion at ./deprecated.jl:269 [inlined] macro expansion at ./logging/logging.jl:401 [inlined] _depwarn at ./deprecated.jl:265 jfptr__depwarn_75457.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] jl_f_invoke_in_world at /source/src/builtins.c:896 #invokelatest_gr#235 at ./reflection.jl:1331 [inlined] invokelatest_gr at ./reflection.jl:1325 [inlined] #depwarn#967 at ./deprecated.jl:256 [inlined] depwarn at ./deprecated.jl:251 [inlined] _lie_groups_depwarn_move at /home/pkgeval/.julia/packages/Manifolds/mH6Su/src/groups/GroupManifold.jl:4 _lie_groups_depwarn_move at /home/pkgeval/.julia/packages/Manifolds/mH6Su/src/groups/GroupManifold.jl:4 [inlined] inv at /home/pkgeval/.julia/packages/Manifolds/mH6Su/src/groups/group.jl:618 inv at /home/pkgeval/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 [inlined] distanceMalahanobisCoordinates at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/src/services/KernelEval.jl:99 distanceMalahanobisSq at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/src/services/KernelEval.jl:113 distanceMalahanobisSq at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/src/services/KernelEval.jl:113 [inlined] ker at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/src/services/KernelEval.jl:137 evaluate at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/src/services/KernelEval.jl:50 unknown function (ip: 0x71a6d5f7d70a) at (unknown file) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 evaluate at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/src/services/ManellicTree.jl:682 expectedLogL at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/src/services/ManellicTree.jl:741 entropy at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/src/services/ManellicTree.jl:759 cost4 at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/test/manellic/testTreeEntropyBandwidth.jl:266 unknown function (ip: 0x71a6d5f7c612) at (unknown file) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 value at /home/pkgeval/.julia/packages/NLSolversBase/n7XXO/src/interface.jl:19 update_state! at /home/pkgeval/.julia/packages/Optim/7krni/src/multivariate/solvers/zeroth_order/nelder_mead.jl:223 optimize at /home/pkgeval/.julia/packages/Optim/7krni/src/multivariate/optimize/optimize.jl:65 optimize at /home/pkgeval/.julia/packages/Optim/7krni/src/multivariate/optimize/optimize.jl:43 [inlined] #optimize#67 at /home/pkgeval/.julia/packages/Optim/7krni/src/multivariate/optimize/interface.jl:274 [inlined] optimize at /home/pkgeval/.julia/packages/Optim/7krni/src/multivariate/optimize/interface.jl:264 [inlined] optimize at /home/pkgeval/.julia/packages/Optim/7krni/src/multivariate/optimize/interface.jl:264 unknown function (ip: 0x71a6d6156bcd) at (unknown file) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 macro expansion at ./timing.jl:645 [inlined] macro expansion at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/test/manellic/testTreeEntropyBandwidth.jl:270 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] top-level scope at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/test/manellic/testTreeEntropyBandwidth.jl:259 _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_invoke at /source/src/gf.c:4022 jl_toplevel_eval_flex at /source/src/toplevel.c:762 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2847 _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 _include at ./loading.jl:2907 include at ./Base.jl:312 IncludeInto at ./Base.jl:313 jfptr_IncludeInto_74172.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2847 _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 _include at ./loading.jl:2907 include at ./Base.jl:312 IncludeInto at ./Base.jl:313 jfptr_IncludeInto_74172.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 exec_options at ./client.jl:286 _start at ./client.jl:553 jfptr__start_75359.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x71a73bb3b249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_70431.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007c0b249c4f10 Total snapshots: 442. Utilization: 0% ╎442 @Base/task.jl:1129 wait_forever() 441╎ 442 @Base/task.jl:1192 wait() [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_70431.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) Allocations: 26091706 (Pool: 26090948; Big: 758); GC: 30 [834] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/test/manellic/testTreeEntropyBandwidth.jl:256 local_find_proc_info at /opt/julia/bin/../lib/julia/libunwind.so.8 (unknown line) _ULx86_64_Ifind_dynamic_proc_info at /opt/julia/bin/../lib/julia/libunwind.so.8 (unknown line) _ULx86_64_get_proc_info_by_ip at /opt/julia/bin/../lib/julia/libunwind.so.8 (unknown line) get_function_name_and_base at /source/src/debuginfo.cpp:731 [inlined] jl_dylib_DI_for_fptr at /source/src/debuginfo.cpp:1166 jl_getDylibFunctionInfo at /source/src/debuginfo.cpp:1198 [inlined] jl_getFunctionInfo_impl at /source/src/debuginfo.cpp:1294 ijl_lookup_code_address at /source/src/stackwalk.c:616 lookup at ./stacktraces.jl:110 firstcaller at ./deprecated.jl:295 [inlined] firstcaller at ./deprecated.jl:290 [inlined] macro expansion at ./deprecated.jl:270 [inlined] macro expansion at ./logging/logging.jl:401 [inlined] _depwarn at ./deprecated.jl:265 jfptr__depwarn_75457.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] jl_f_invoke_in_world at /source/src/builtins.c:896 #invokelatest_gr#235 at ./reflection.jl:1331 [inlined] invokelatest_gr at ./reflection.jl:1325 [inlined] #depwarn#967 at ./deprecated.jl:256 [inlined] depwarn at ./deprecated.jl:251 [inlined] _lie_groups_depwarn_move at /home/pkgeval/.julia/packages/Manifolds/mH6Su/src/groups/GroupManifold.jl:4 _lie_groups_depwarn_move at /home/pkgeval/.julia/packages/Manifolds/mH6Su/src/groups/GroupManifold.jl:4 [inlined] inv at /home/pkgeval/.julia/packages/Manifolds/mH6Su/src/groups/group.jl:618 inv at /home/pkgeval/.julia/packages/ManifoldsBase/nqeOA/src/nested_trait.jl:306 [inlined] distanceMalahanobisCoordinates at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/src/services/KernelEval.jl:99 distanceMalahanobisSq at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/src/services/KernelEval.jl:113 distanceMalahanobisSq at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/src/services/KernelEval.jl:113 [inlined] ker at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/src/services/KernelEval.jl:137 evaluate at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/src/services/KernelEval.jl:50 unknown function (ip: 0x71a6d5f7d70a) at (unknown file) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 evaluate at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/src/services/ManellicTree.jl:682 expectedLogL at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/src/services/ManellicTree.jl:741 entropy at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/src/services/ManellicTree.jl:759 cost4 at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/test/manellic/testTreeEntropyBandwidth.jl:266 unknown function (ip: 0x71a6d5f7c612) at (unknown file) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 value at /home/pkgeval/.julia/packages/NLSolversBase/n7XXO/src/interface.jl:19 update_state! at /home/pkgeval/.julia/packages/Optim/7krni/src/multivariate/solvers/zeroth_order/nelder_mead.jl:254 optimize at /home/pkgeval/.julia/packages/Optim/7krni/src/multivariate/optimize/optimize.jl:65 optimize at /home/pkgeval/.julia/packages/Optim/7krni/src/multivariate/optimize/optimize.jl:43 [inlined] #optimize#67 at /home/pkgeval/.julia/packages/Optim/7krni/src/multivariate/optimize/interface.jl:274 [inlined] optimize at /home/pkgeval/.julia/packages/Optim/7krni/src/multivariate/optimize/interface.jl:264 [inlined] optimize at /home/pkgeval/.julia/packages/Optim/7krni/src/multivariate/optimize/interface.jl:264 unknown function (ip: 0x71a6d6156bcd) at (unknown file) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 macro expansion at ./timing.jl:645 [inlined] macro expansion at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/test/manellic/testTreeEntropyBandwidth.jl:270 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] top-level scope at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/test/manellic/testTreeEntropyBandwidth.jl:259 _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_invoke at /source/src/gf.c:4022 jl_toplevel_eval_flex at /source/src/toplevel.c:762 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2847 _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 _include at ./loading.jl:2907 include at ./Base.jl:312 IncludeInto at ./Base.jl:313 jfptr_IncludeInto_74172.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2847 _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 _include at ./loading.jl:2907 include at ./Base.jl:312 IncludeInto at ./Base.jl:313 jfptr_IncludeInto_74172.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 exec_options at ./client.jl:286 _start at ./client.jl:553 jfptr__start_75359.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x71a73bb3b249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) Allocations: 786730941 (Pool: 786726821; Big: 4120); GC: 521 PkgEval terminated after 2728.62s: test duration exceeded the time limit