Package evaluation of RestrictedBoltzmannMachines on Julia 1.13.0-DEV.971 (04e26c5eae*) started at 2025-08-10T15:16:24.639 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.7s ################################################################################ # Installation # Installing RestrictedBoltzmannMachines... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [12e6b396] + RestrictedBoltzmannMachines v5.1.1 Updating `~/.julia/environments/v1.13/Manifest.toml` [79e6a3ab] + Adapt v4.3.0 [4fba245c] + ArrayInterface v7.19.0 [d360d2e6] + ChainRulesCore v1.26.0 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.0 [187b0558] + ConstructionBase v1.6.0 [b552c78f] + DiffRules v1.15.1 [ffbed154] + DocStringExtensions v0.9.5 [da5c29d0] + EllipsisNotation v1.8.0 [1a297f60] + FillArrays v1.13.0 [d9f16b24] + Functors v0.5.2 [615f187c] + IfElse v0.1.1 [92d709cd] + IrrationalConstants v0.2.4 [692b3bcd] + JLLWrappers v1.7.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [77ba4419] + NaNMath v1.1.3 [3bd65402] + Optimisers v0.4.6 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [ae029012] + Requires v1.3.1 [12e6b396] + RestrictedBoltzmannMachines v5.1.1 [276daf66] + SpecialFunctions v2.5.1 [aedffcd0] + Static v1.2.0 [0d7ed370] + StaticArrayInterface v1.8.0 [10745b16] + Statistics v1.11.1 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [56f22d72] + Artifacts v1.11.0 [ade2ca70] + Dates v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [8e850b90] + libblastrampoline_jll v5.13.1+0 Installation completed after 4.37s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 63.27s ################################################################################ # Testing # Testing RestrictedBoltzmannMachines Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_Cx2Tn8/Project.toml` [4c88cf16] ↑ Aqua v0.8.13 ⇒ v0.8.14 [872c559c] ↑ NNlib v0.9.30 ⇒ v0.9.31 [12e6b396] + RestrictedBoltzmannMachines v5.1.1 [2913bbd2] ↑ StatsBase v0.34.5 ⇒ v0.34.6 [37e2e46d] ↑ LinearAlgebra v1.11.0 ⇒ v1.13.0 Updating `/tmp/jl_Cx2Tn8/Manifest.toml` [4c88cf16] ↑ Aqua v0.8.13 ⇒ v0.8.14 [d360d2e6] ↑ ChainRulesCore v1.25.2 ⇒ v1.26.0 [34da2185] ↑ Compat v4.16.0 ⇒ v4.18.0 [692b3bcd] ↑ JLLWrappers v1.7.0 ⇒ v1.7.1 [63c18a36] ↑ KernelAbstractions v0.9.35 ⇒ v0.9.38 [872c559c] ↑ NNlib v0.9.30 ⇒ v0.9.31 [aea7be01] ↑ PrecompileTools v1.2.1 ⇒ v1.3.2 [12e6b396] + RestrictedBoltzmannMachines v5.1.1 [7e506255] ↑ ScopedValues v1.3.0 ⇒ v1.4.0 [a2af1166] ↑ SortingAlgorithms v1.2.1 ⇒ v1.2.2 [90137ffa] ↑ StaticArrays v1.9.13 ⇒ v1.9.14 [2913bbd2] ↑ StatsBase v0.34.5 ⇒ v0.34.6 [c8ffd9c3] - MbedTLS_jll v2.28.6+0 [f43a241f] ↑ Downloads v1.6.0 ⇒ v1.7.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [37e2e46d] ↑ LinearAlgebra v1.11.0 ⇒ v1.13.0 [ca575930] ↑ NetworkOptions v1.2.0 ⇒ v1.3.0 [44cfe95a] ↑ Pkg v1.11.0 ⇒ v1.13.0 [2f01184e] ↑ SparseArrays v1.11.0 ⇒ v1.13.0 [f489334b] + StyledStrings v1.11.0 [e66e0078] ↑ CompilerSupportLibraries_jll v1.1.1+0 ⇒ v1.3.0+1 [deac9b47] ↑ LibCURL_jll v8.6.0+0 ⇒ v8.15.0+1 [e37daf67] ↑ LibGit2_jll v1.7.2+0 ⇒ v1.9.1+0 [29816b5a] ↑ LibSSH2_jll v1.11.0+1 ⇒ v1.11.3+1 [14a3606d] ↑ MozillaCACerts_jll v2023.12.12 ⇒ v2025.7.15 [4536629a] ↑ OpenBLAS_jll v0.3.27+1 ⇒ v0.3.29+0 [458c3c95] ↑ OpenSSL_jll v3.5.0+0 ⇒ v3.5.1+0 [efcefdf7] + PCRE2_jll v10.45.0+0 [bea87d4a] ↑ SuiteSparse_jll v7.7.0+0 ⇒ v7.10.1+0 [83775a58] ↑ Zlib_jll v1.2.13+1 ⇒ v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] ↑ libblastrampoline_jll v5.11.0+0 ⇒ v5.13.1+0 [8e850ede] ↑ nghttp2_jll v1.59.0+0 ⇒ v1.65.0+0 [3f19e933] ↑ p7zip_jll v17.4.0+2 ⇒ v17.5.0+2 Test Successfully re-resolved Status `/tmp/jl_Cx2Tn8/Project.toml` [4c88cf16] Aqua v0.8.14 [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.120 [da5c29d0] EllipsisNotation v1.8.0 [26cc04aa] FiniteDifferences v0.12.32 [f6369f11] ForwardDiff v1.0.1 [f67ccb44] HDF5 v0.17.2 [2ab3a3ac] LogExpFunctions v0.3.29 [872c559c] NNlib v0.9.31 [3bd65402] Optimisers v0.4.6 [1fd47b50] QuadGK v2.11.2 [12e6b396] RestrictedBoltzmannMachines v5.1.1 [276daf66] SpecialFunctions v2.5.1 [10745b16] Statistics v1.11.1 [2913bbd2] StatsBase v0.34.6 [98cad3c8] ValueHistories v0.5.4 [e88e6eb3] Zygote v0.7.10 [b77e0a4c] InteractiveUtils v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_Cx2Tn8/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [4c88cf16] Aqua v0.8.14 [4fba245c] ArrayInterface v7.19.0 [a9b6321e] Atomix v1.1.1 [082447d4] ChainRules v1.72.5 [d360d2e6] ChainRulesCore v1.26.0 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.0 [187b0558] ConstructionBase v1.6.0 [9a962f9c] DataAPI v1.16.0 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.5 [da5c29d0] EllipsisNotation v1.8.0 [1a297f60] FillArrays v1.13.0 [26cc04aa] FiniteDifferences v0.12.32 [f6369f11] ForwardDiff v1.0.1 [d9f16b24] Functors v0.5.2 [46192b85] GPUArraysCore v0.2.0 [f67ccb44] HDF5 v0.17.2 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [7869d1d1] IRTools v0.4.15 [615f187c] IfElse v0.1.1 [92d709cd] IrrationalConstants v0.2.4 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [63c18a36] KernelAbstractions v0.9.38 [2ab3a3ac] LogExpFunctions v0.3.29 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [872c559c] NNlib v0.9.31 [77ba4419] NaNMath v1.1.3 [3bd65402] Optimisers v0.4.6 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.35 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [c1ae055f] RealDot v0.1.0 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [12e6b396] RestrictedBoltzmannMachines v5.1.1 [708f8203] Richardson v1.4.2 [79098fc4] Rmath v0.8.0 [7e506255] ScopedValues v1.4.0 [a2af1166] SortingAlgorithms v1.2.2 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.5.1 [aedffcd0] Static v1.2.0 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.14 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.6 [4c63d2b9] StatsFuns v1.5.0 [09ab397b] StructArrays v0.7.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [013be700] UnsafeAtomics v0.3.0 [98cad3c8] ValueHistories v0.5.4 [e88e6eb3] Zygote v0.7.10 [700de1a5] ZygoteRules v0.2.7 [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.1+0 [7cb0a576] MPICH_jll v4.3.1+0 [f1f71cc9] MPItrampoline_jll v5.5.4+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.8+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [477f73a3] libaec_jll v1.1.3+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.7.15 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.1+0 [efcefdf7] PCRE2_jll v10.45.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Test Summary: | Pass Total Time two | 5 5 2.2s Test Summary: | Pass Total Time inf | 3 3 0.0s Test Summary: | Pass Total Time generate_sequences | 1 1 0.5s Test Summary: | Pass Total Time broadlike | 3 3 4.1s Test Summary: | Pass Total Time wmean | 7 7 13.8s Test Summary: | Pass Total Time wsum | 7 7 1.3s Test Summary: | Pass Total Time reshape_maybe | 12 12 0.4s Test Summary: | Pass Total Time sizedims | 6 6 0.1s Test Summary: | Pass Total Time moving_average | 103 103 0.1s Test Summary: | Pass Total Time vstack | 3 3 1.0s Test Summary: | Pass Total Time convert_eltype | 7 7 2.0s Test Summary: | Pass Total Time linalg | 6 6 8.4s Test Summary: | Pass Total Time onehot | 2102 2102 3.0s Test Summary: | Pass Total Time categorical_rand | 3 3 1.3s Test Summary: | Pass Total Time categorical_sample | 1 1 26.9s Test Summary: | Pass Total Time gumbel | 2 2 0.3s Test Summary: | Pass Total Time categorical_sample_from_logits | 1 1 8.4s Test Summary: | Pass Total Time categorical_sample_from_logits_gumbel | 1 1 2.1s Precompiling packages... 1666.4 ms ✓ StructArrays 1320.9 ms ✓ StructArrays → StructArraysSparseArraysExt 1081.8 ms ✓ StructArrays → StructArraysLinearAlgebraExt 1010.7 ms ✓ StructArrays → StructArraysAdaptExt 12370.1 ms ✓ ChainRules 77498.9 ms ✓ Zygote 6 dependencies successfully precompiled in 95 seconds. 60 already precompiled. Precompiling packages... 951.6 ms ✓ Optimisers → OptimisersAdaptExt 1 dependency successfully precompiled in 1 seconds. 15 already precompiled. Precompiling packages... 1568.6 ms ✓ ArrayInterface → ArrayInterfaceChainRulesExt 1 dependency successfully precompiled in 2 seconds. 40 already precompiled. Test Summary: | Pass Total Time batches, n=5, m=2, Bv=(), Bh=() | 8 8 1m23.4s Test Summary: | Pass Total Time batches, n=5, m=2, Bv=(), Bh=(3, 2) | 9 9 40.9s Test Summary: | Pass Total Time batches, n=5, m=2, Bv=(3, 2), Bh=() | 9 9 6.8s Test Summary: | Pass Total Time batches, n=5, m=2, Bv=(3, 2), Bh=(3, 2) | 9 9 14.7s Test Summary: | Pass Total Time batches, n=5, m=(3, 4), Bv=(), Bh=() | 8 8 8.1s Test Summary: | Pass Total Time batches, n=5, m=(3, 4), Bv=(), Bh=(3, 2) | 9 9 26.5s Test Summary: | Pass Total Time batches, n=5, m=(3, 4), Bv=(3, 2), Bh=() | 9 9 3.6s Test Summary: | Pass Total Time batches, n=5, m=(3, 4), Bv=(3, 2), Bh=(3, 2) | 9 9 7.7s Test Summary: | Pass Total Time batches, n=(5, 2), m=2, Bv=(), Bh=() | 8 8 3.8s Test Summary: | Pass Total Time batches, n=(5, 2), m=2, Bv=(), Bh=(3, 2) | 9 9 3.2s Test Summary: | Pass Total Time batches, n=(5, 2), m=2, Bv=(3, 2), Bh=() | 9 9 3.6s Test Summary: | Pass Total Time batches, n=(5, 2), m=2, Bv=(3, 2), Bh=(3, 2) | 9 9 6.8s Test Summary: | Pass Total Time batches, n=(5, 2), m=(3, 4), Bv=(), Bh=() | 8 8 3.7s Test Summary: | Pass Total Time batches, n=(5, 2), m=(3, 4), Bv=(), Bh=(3, 2) | 9 9 3.2s Test Summary: | Pass Total Time batches, n=(5, 2), m=(3, 4), Bv=(3, 2), Bh=() | 9 9 3.5s Test Summary: | Pass Total Time batches, n=(5, 2), m=(3, 4), Bv=(3, 2), Bh=(3, 2) | 9 9 9.0s Test Summary: | Pass Total Time singleton batch dims | 14 14 5.8s Test Summary: | Pass Total Time sample_v_from_v and sample_h_from_h on binary RBM | 4 4 11.5s Test Summary: | Pass Total Time rbm convenience constructors | 11 11 1.8s Test Summary: | Pass Total Time Binary-Binary RBM | 60 60 21.7s Test Summary: | Pass Total Time mirror | 5 5 7.3s Test Summary: | Pass Total Time binary free energy | 5 5 1.8s Test Summary: | Pass Total Time Gaussian-Gaussian RBM, 1-dimension | 1 1 12.5s Test Summary: | Pass Total Time Gaussian-Gaussian RBM, multi-dimensional | 8 8 38.7s Test Summary: | Pass Total Time zero hidden units | 1 1 0.0s Test Summary: | Pass Total Time ∂free_energy | 12 12 29.7s Test Summary: | Pass Total Time total_mean_h_from_v, total_mean_v_from_h, etc. | 8 8 10.5s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.Binary | 79 79 46.9s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.Spin | 79 79 31.9s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.Potts | 79 79 41.8s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.Gaussian | 79 79 40.5s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.ReLU | 79 79 51.4s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.dReLU | 79 79 2m09.1s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.pReLU | 79 79 1m40.8s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.xReLU | 79 79 1m59.4s Test Summary: | Pass Total Time discrete layers (RestrictedBoltzmannMachines.Binary) | 2 2 3.2s Test Summary: | Pass Total Time discrete layers (RestrictedBoltzmannMachines.Spin) | 2 2 2.0s Test Summary: | Pass Total Time discrete layers (RestrictedBoltzmannMachines.Potts) | 2 2 2.0s Test Summary: | Pass Total Time Binary | 127 127 8.0s Test Summary: | Pass Total Time Spin | 5 5 5.2s Test Summary: | Pass Total Time Potts | 7 7 7.6s Test Summary: | Pass Total Time Gaussian | 7 7 19.0s Test Summary: | Pass Total Time ReLU | 7 7 16.5s Test Summary: | Pass Total Time pReLU / xReLU / dReLU convert | 41 41 15.1s Test Summary: | Pass Total Time dReLU | 9 9 18.3s Test Summary: | Pass Total Time pReLU | 3 3 1m50.6s Test Summary: | Pass Total Time xReLU | 3 3 2m12.9s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.Binary | 1 1 2.5s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.Spin | 1 1 1.7s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.Potts | 1 1 1.4s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.Gaussian | 1 1 4.0s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.ReLU | 1 1 0.9s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.dReLU | 1 1 5.5s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.pReLU | 1 1 11.1s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.xReLU | 1 1 9.7s Test Summary: | Pass Total Time binary pseudolikelihood | 4 4 7.2s Test Summary: | Pass Total Time spins pseudolikelihood | 4 4 4.7s Test Summary: | Pass Total Time Potts pseudolikelihood | 4 4 5.3s Test Summary: | Pass Total Time nobs | 7 7 0.1s Test Summary: | Pass Total Time getobs | 6 6 1.5s Test Summary: | Pass Total Time shuffleobs | 4 4 0.5s Test Summary: | Pass Total Time infinite_minibatches | 49 49 0.7s Test Summary: | Pass Total Time initialization Binary | 1 1 3.6s Test Summary: | Pass Total Time initialization Spin | 1 1 3.2s Test Summary: | Pass Total Time initialization Potts | 1 1 12.0s Test Summary: | Pass Total Time initialization Gaussian | 2 2 4.4s Test Summary: | Pass Total Time initialization dReLU | 2 2 7.1s Test Summary: | Pass Total Time initialization pReLU | 2 2 2.4s Test Summary: | Pass Total Time initialization xReLU | 2 2 3.3s Test Summary: | Pass Total Time ∂regularize! | 3 3 27.4s Test Summary: | Pass Total Time ∂regularize | 3 3 4.7s Test Summary: | Pass Total Time ∂regularize_fields | 9 9 5.0s Precompiling packages... 5238.2 ms ✓ StatsBase 2531.7 ms ✓ HypergeometricFunctions 3143.6 ms ✓ StatsFuns 9830.3 ms ✓ Distributions 4 dependencies successfully precompiled in 23 seconds. 43 already precompiled. Precompiling packages... 3635.8 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 1 dependency successfully precompiled in 4 seconds. 23 already precompiled. Precompiling packages... 4254.5 ms ✓ Distributions → DistributionsChainRulesCoreExt 1 dependency successfully precompiled in 5 seconds. 52 already precompiled. Precompiling packages... 4088.1 ms ✓ Distributions → DistributionsTestExt 1 dependency successfully precompiled in 5 seconds. 49 already precompiled. Test Summary: | Pass Total Time sqrt1half | 6 6 0.0s Test Summary: | Pass Total Time randnt | 5 5 0.0s Test Summary: | Pass Total Time ∂ operations | 4 4 0.2s Precompiling packages... 1832.9 ms ✓ StaticArrays → StaticArraysStatisticsExt 8797.6 ms ✓ KernelAbstractions 2393.2 ms ✓ KernelAbstractions → LinearAlgebraExt 13612.5 ms ✓ NNlib 4 dependencies successfully precompiled in 28 seconds. 29 already precompiled. Precompiling packages... 1687.8 ms ✓ StaticArrayInterface → StaticArrayInterfaceStaticArraysExt 1 dependency successfully precompiled in 2 seconds. 20 already precompiled. Precompiling packages... 1438.1 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1 dependency successfully precompiled in 2 seconds. 10 already precompiled. Precompiling packages... 1558.2 ms ✓ StructArrays → StructArraysStaticArraysExt 1 dependency successfully precompiled in 2 seconds. 19 already precompiled. Precompiling packages... 3915.1 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 1 dependency successfully precompiled in 4 seconds. 21 already precompiled. Precompiling packages... 2959.5 ms ✓ KernelAbstractions → SparseArraysExt 1 dependency successfully precompiled in 3 seconds. 29 already precompiled. Precompiling packages... 2366.9 ms ✓ StructArrays → StructArraysGPUArraysCoreExt 1 dependency successfully precompiled in 3 seconds. 36 already precompiled. Precompiling packages... 2817.2 ms ✓ NNlib → NNlibSpecialFunctionsExt 3181.8 ms ✓ NNlib → NNlibForwardDiffExt 2 dependencies successfully precompiled in 6 seconds. 48 already precompiled. Test Summary: | Pass Total Time Binary-Binary RBM partition function (brute force) | 3 3 34.1s Test Summary: | Pass Total Time Spin-Binary RBM partition function (brute force) | 3 3 22.0s Test Summary: | Pass Total Time metropolis β=0.5 | 1 1 11.1s Test Summary: | Pass Total Time metropolis β=1.0 | 1 1 6.5s Test Summary: | Pass Total Time metropolis β=2.0 | 1 1 5.8s Test Summary: | Pass Total Time metropolis! β=0.5 | 1 1 7.6s Test Summary: | Pass Total Time metropolis! β=1.0 | 1 1 6.8s Test Summary: | Pass Total Time metropolis! β=2.0 | 1 1 6.8s Test Summary: | Pass Total Time zerosum (visible Potts) | 5 5 11.2s Test Summary: | Pass Total Time zerosum (hidden Potts) | 5 5 3.8s Test Summary: | Pass Total Time zerosum (visible and hidden Potts) | 7 7 13.0s Test Summary: | Pass Total Time zerosum (visible Potts, various hidden layers) | 28 28 24.1s Test Summary: | Pass Total Time rescale_activations! | 10 10 9.2s Test Summary: | Pass Total Time rescale_hidden! | 6 6 8.4s Test Summary: | Pass Total Time rescale_weights! | 2 2 0.9s Test Summary: | Pass Total Time pcd | 3 3 21.8s Test Summary: | Pass Total Time shift_fields | 8 8 4.4s Test Summary: | Pass Total Time shift_fields! | 8 8 1.1s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.Potts | 66 66 3.5s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.PottsGumbel | 66 66 13.7s Test Summary: | Pass Total Time discrete layers (RestrictedBoltzmannMachines.Potts) | 2 2 0.2s Test Summary: | Pass Total Time discrete layers (RestrictedBoltzmannMachines.PottsGumbel) | 2 2 2.1s Test Summary: | Pass Total Time PottsGumbel | 6 6 1.1s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.Potts | 1 1 0.0s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.PottsGumbel | 1 1 1.2s Test Summary: | Pass Total Time rbm | 5 5 12.0s Test Summary: | Pass Total Time layers | 24 24 1.4s Test Summary: | Pass Total Time Gaussian | 6 6 0.7s Test Summary: | Pass Total Time PottsGumbel | 4 4 0.8s Test Summary: | Pass Total Time std | 12 12 1.8s Test Summary: | Pass Total Time CenteredBinaryRBM | 7 7 2.5s Test Summary: | Pass Total Time center / uncenter | 7 7 1.1s Test Summary: | Pass Total Time rbm energy invariance | 2 2 5.6s Test Summary: | Pass Total Time free energy | 1 1 0.7s Test Summary: | Pass Total Time ∂free energy | 3 3 17.1s Test Summary: | Pass Total Time mirror | 5 5 9.3s Test Summary: | Pass Total Time centered pcd | 5 5 44.2s Test Summary: | Pass Total Time centered pcd training | 3 3 11.6s Test Summary: | Pass Total Time ∂regularize! centered RBM | 3 3 39.6s Test Summary: | Pass Total Time ∂regularize! centered RBM | 3 3 49.5s Test Summary: | Pass Total Time ∂regularize! centered RBM | 3 3 45.2s Test Summary: | Pass Total Time shift_fields | 8 8 4.0s Test Summary: | Pass Total Time shift_fields! | 8 8 0.0s Test Summary: | Pass Total Time standardize | 16 16 12.7s Test Summary: | Pass Total Time unstandardize | 3 3 0.1s Test Summary: | Pass Total Time delta_energy | 4 4 0.3s Test Summary: | Pass Total Time standardize! | 6 6 2.1s Test Summary: | Pass Total Time ∂free energy | 8 8 19.2s Test Summary: | Pass Total Time standardized constructor | 2 2 0.2s Test Summary: | Pass Total Time rescale_hidden_activations! | 6 6 8.2s Test Summary: | Pass Total Time standardized pcd | 4 4 29.5s Test Summary: | Pass Total Time exact enumeration of configurations | 20 20 1m19.0s Test Summary: | Pass Total Time ∂regularize! standardized RBM with Binary | 6 6 1m01.7s Test Summary: | Pass Total Time ∂regularize! standardized RBM with ReLU | 6 6 50.2s Test Summary: | Pass Total Time ∂regularize! standardized RBM with dReLU | 6 6 43.0s Test Summary: | Pass Total Time unstandardized_weights | 1 1 0.4s Test Summary: | Pass Total Time weight_norms | 1 1 0.3s Test Summary: | Pass Total Time rescale_weights! std ReLU | 3 3 3.8s Test Summary: | Pass Total Time rescale_weights! std dReLU | 3 3 8.5s Test Summary: | Pass Total Time rescale_weights! std Binary | 2 2 0.1s Test Summary: | Pass Total Time nsReLU convert | 7 7 0.6s Test Summary: | Pass Total Time nsReLU | 2 2 7.2s ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 115 running 1 of 1 signal (10): User defined signal 1 _ZN4llvm18ExecutionDomainFixD2Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN12_GLOBAL__N_121X86ExecutionDomainFixD0Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm13PMDataManagerD1Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm13FPPassManagerD0Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm13PMDataManagerD1Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZThn32_N12_GLOBAL__N_113MPPassManagerD0Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm17PMTopLevelManagerD1Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm6legacy15PassManagerImplD0Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm6legacy11PassManagerD1Ev at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm3orc14SimpleCompilerclERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) operator() at /source/src/jitlayers.cpp:1612 addModule at /source/src/jitlayers.cpp:2093 jl_compile_codeinst_now at /source/src/jitlayers.cpp:682 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:873 jl_compile_method_internal at /source/src/gf.c:3527 _jl_invoke at /source/src/gf.c:4007 [inlined] ijl_apply_generic at /source/src/gf.c:4212 #update_registries#162 at /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:1735 update_registries at /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:1732 [inlined] #develop#141 at /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:284 develop at /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:249 _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 #develop#12 at /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:168 develop at /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:157 [inlined] #develop#9 at /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155 [inlined] develop at /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155 [inlined] precompile_wrapper at /home/pkgeval/.julia/packages/Aqua/MCcFg/src/persistent_tasks.jl:93 #has_persistent_tasks#58 at /home/pkgeval/.julia/packages/Aqua/MCcFg/src/persistent_tasks.jl:49 has_persistent_tasks at /home/pkgeval/.julia/packages/Aqua/MCcFg/src/persistent_tasks.jl:46 unknown function (ip: 0x7520c8ab69da) at (unknown file) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] jl_f__apply_iterate at /source/src/builtins.c:864 eval_test_function at /source/usr/share/julia/stdlib/v1.13/Test/src/Test.jl:388 macro expansion at /source/usr/share/julia/stdlib/v1.13/Test/src/Test.jl:742 [inlined] #test_persistent_tasks#56 at /home/pkgeval/.julia/packages/Aqua/MCcFg/src/persistent_tasks.jl:38 test_persistent_tasks at /home/pkgeval/.julia/packages/Aqua/MCcFg/src/persistent_tasks.jl:34 [inlined] #test_persistent_tasks#57 at /home/pkgeval/.julia/packages/Aqua/MCcFg/src/persistent_tasks.jl:43 [inlined] test_persistent_tasks at /home/pkgeval/.julia/packages/Aqua/MCcFg/src/persistent_tasks.jl:42 [inlined] macro expansion at /home/pkgeval/.julia/packages/Aqua/MCcFg/src/Aqua.jl:109 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] #test_all#72 at /home/pkgeval/.julia/packages/Aqua/MCcFg/src/Aqua.jl:109 test_all at /home/pkgeval/.julia/packages/Aqua/MCcFg/src/Aqua.jl:59 unknown function (ip: 0x7520c8a48546) at (unknown file) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2847 _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 _include at ./loading.jl:2907 include at ./Base.jl:312 IncludeInto at ./Base.jl:313 jfptr_IncludeInto_36308.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_eval_module_expr at /source/src/toplevel.c:196 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:658 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2847 _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 _include at ./loading.jl:2907 include at ./Base.jl:312 IncludeInto at ./Base.jl:313 jfptr_IncludeInto_36308.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 exec_options at ./client.jl:286 _start at ./client.jl:553 jfptr__start_70166.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x752103893249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_30142.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x0000747fda802860 Total snapshots: 433. Utilization: 0% ╎433 @Base/task.jl:1129 wait_forever() 432╎ 433 @Base/task.jl:1192 wait() ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007520e9600010 Total snapshots: 1. Utilization: 100% ╎1 @Base/client.jl:553 _start() ╎ 1 @Base/client.jl:286 exec_options(opts::Base.JLOptions) ╎ 1 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ 1 @Base/Base.jl:313 (::Base.IncludeInto)(fname::String) ╎ 1 @Base/Base.jl:312 include(mapexpr::Function, mod::Module, _path::Strin… ╎ 1 @Base/loading.jl:2907 _include(mapexpr::Function, mod::Module, _path:… ╎ ╎ 1 @Base/loading.jl:2847 include_string(mapexpr::typeof(identity), mod:… ╎ ╎ 1 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ 1 @Base/Base.jl:313 (::Base.IncludeInto)(fname::String) ╎ ╎ 1 @Base/Base.jl:312 include(mapexpr::Function, mod::Module, _path::… ╎ ╎ 1 @Base/loading.jl:2907 _include(mapexpr::Function, mod::Module, _… ╎ ╎ ╎ 1 @Base/loading.jl:2847 include_string(mapexpr::typeof(identity),… ╎ ╎ ╎ 1 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ ╎ 1 @Aqua/src/Aqua.jl:59 kwcall(::@NamedTuple{stale_deps::@NamedT… ╎ ╎ ╎ 1 @Aqua/src/Aqua.jl:109 test_all(testtarget::Module; ambiguiti… ╎ ╎ ╎ 1 @Test/src/Test.jl:1929 macro expansion ╎ ╎ ╎ ╎ 1 @Aqua/src/Aqua.jl:109 macro expansion ╎ ╎ ╎ ╎ 1 @Aqua/…nt_tasks.jl:42 test_persistent_tasks ╎ ╎ ╎ ╎ 1 @Aqua/…nt_tasks.jl:43 #test_persistent_tasks#57 ╎ ╎ ╎ ╎ 1 @Aqua/…nt_tasks.jl:34 test_persistent_tasks ╎ ╎ ╎ ╎ 1 @Aqua/…t_tasks.jl:38 test_persistent_tasks(package::Ba… ╎ ╎ ╎ ╎ ╎ 1 @Test/…c/Test.jl:742 macro expansion ╎ ╎ ╎ ╎ ╎ 1 @Test/…c/Test.jl:388 eval_test_function(func::Any, a… ╎ ╎ ╎ ╎ ╎ 1 @Aqua/…_tasks.jl:46 has_persistent_tasks(package::B… ╎ ╎ ╎ ╎ ╎ 1 @Aqua/…_tasks.jl:49 has_persistent_tasks(package::… ╎ ╎ ╎ ╎ ╎ 1 @Aqua/…tasks.jl:93 precompile_wrapper(project::St… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Pkg/…c/API.jl:155 develop ╎ ╎ ╎ ╎ ╎ ╎ 1 @Pkg/…c/API.jl:155 #develop#9 ╎ ╎ ╎ ╎ ╎ ╎ 1 @Pkg/…c/API.jl:157 develop ╎ ╎ ╎ ╎ ╎ ╎ 1 @Pkg/…/API.jl:168 develop(pkgs::Vector{Pkg.Ty… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Pkg/…/API.jl:249 kwcall(::@NamedTuple{io::B… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Pkg/…API.jl:284 develop(ctx::Pkg.Types.Con… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Pkg/…ons.jl:1732 update_registries ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Pkg/…ons.jl:1735 update_registries(ctx::… [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_30142.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) Allocations: 21583502 (Pool: 21582922; Big: 580); GC: 17 [115] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/RestrictedBoltzmannMachines/TklUE/test/aqua.jl:5 malloc at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x7ffd0000007f) at (unknown file) unknown function (ip: 0xe0497af) at (unknown file) unknown function (ip: (nil)) at (unknown file) Allocations: 1274667431 (Pool: 1274651476; Big: 15955); GC: 2393 PkgEval terminated after 2727.07s: test duration exceeded the time limit