Package evaluation of PulseInputDDM on Julia 1.13.0-DEV.971 (04e26c5eae*) started at 2025-08-11T00:49:26.656 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.41s ################################################################################ # Installation # Installing PulseInputDDM... Resolving package versions... Installed Conda ── v1.10.2 Installed PyCall ─ v1.96.4 Updating `~/.julia/environments/v1.13/Project.toml` [c2542da2] + PulseInputDDM v0.4.5 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.16.0 [621f4979] + AbstractFFTs v1.5.0 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.19.0 [07f847a3] + BasisFunctionExpansions v1.1.1 [e1450e63] + BufferedStreams v1.2.2 [aafaddc9] + CatIndices v0.2.2 ⌅ [aaaa29a8] + Clustering v0.14.4 [944b1d66] + CodecZlib v0.7.8 ⌅ [3da002f7] + ColorTypes v0.10.12 ⌃ [c3611d14] + ColorVectorSpace v0.10.0 ⌃ [5ae59095] + Colors v0.12.11 [861a8166] + Combinatorics v1.0.3 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.0 [a33af91c] + CompositionsBase v0.1.2 [ed09eef8] + ComputationalResources v0.3.2 [8f4d0f93] + Conda v1.10.2 [187b0558] + ConstructionBase v1.6.0 [dc8bdbbb] + CustomUnitRanges v1.0.2 ⌅ [717857b8] + DSP v0.7.10 [9a962f9c] + DataAPI v1.16.0 ⌅ [864edb3b] + DataStructures v0.18.22 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.4 [6e83dbb3] + Discretizers v3.2.4 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [4f61f5a4] + FFTViews v0.3.2 [7a1cc6ca] + FFTW v1.9.0 [bf96fef3] + FieldMetadata v0.3.1 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [53c48c17] + FixedPointNumbers v0.8.5 [4c728ea3] + Flatten v0.4.3 ⌅ [f6369f11] + ForwardDiff v0.10.38 [f67ccb44] + HDF5 v0.17.2 [34004b35] + HypergeometricFunctions v0.3.28 [09f84164] + HypothesisTests v0.11.5 [615f187c] + IfElse v0.1.1 [c817782e] + ImageBase v0.1.7 [a09fc81d] + ImageCore v0.10.5 [6a3955dd] + ImageFiltering v0.7.10 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [c8e1da08] + IterTools v1.10.0 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v0.21.4 [b964fa9f] + LaTeXStrings v1.4.0 [d3d80556] + LineSearches v7.4.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [23992714] + MAT v0.10.7 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [dbb5928d] + MappedArrays v0.4.2 [e1d29d7a] + Missings v1.2.0 [e94cdb99] + MosaicViews v0.3.4 [0db19996] + NBInclude v2.4.0 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [b8a86587] + NearestNeighbors v0.4.22 [6fe1bfb0] + OffsetArrays v1.17.0 [429524aa] + Optim v1.13.2 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [5432bcbf] + PaddedViews v0.5.12 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [f27b6e38] + Polynomials v4.1.0 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [43287f4e] + PtrArrays v1.3.0 [c2542da2] + PulseInputDDM v0.4.5 [438e738f] + PyCall v1.96.4 [d330b81b] + PyPlot v2.11.6 [1fd47b50] + QuadGK v2.11.2 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [f2b01f46] + Roots v2.2.8 [efcf1570] + Setfield v1.1.2 [b85f4697] + SoftGlobalScope v1.1.0 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.5.1 [cae243ae] + StackViews v0.1.2 [aedffcd0] + Static v1.2.0 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.14 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 ⌅ [2913bbd2] + StatsBase v0.33.21 [4c63d2b9] + StatsFuns v1.5.0 ⌅ [6aa5eb33] + TaylorSeries v0.18.5 [62fd8b95] + TensorCore v0.1.1 [06e1c1a7] + TiledIteration v0.5.0 [3bb67fe8] + TranscodingStreams v0.11.3 [3a884ed6] + UnPack v1.0.2 [81def892] + VersionParsing v1.3.0 [f5851436] + FFTW_jll v3.3.11+0 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.1+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [856f044c] + MKL_jll v2025.2.0+0 [7cb0a576] + MPICH_jll v4.3.1+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.8+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [477f73a3] + libaec_jll v1.1.3+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+1 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.7.15 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [efcefdf7] + PCRE2_jll v10.45.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building Conda ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b19db3927f0db4151cb86d073689f2428e524576/build.log` Building PyCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9816a3826b0ebf49ab4926e2b18842ad8b5c8f04/build.log` Installation completed after 63.92s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 513.1s ################################################################################ # Testing # Testing PulseInputDDM Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_GN4PFJ/Project.toml` [c2542da2] + PulseInputDDM v0.4.5 [37e2e46d] ~ LinearAlgebra ⇒ v1.13.0 [9a3f8284] ~ Random ⇒ v1.11.0 [8dfed614] ~ Test ⇒ v1.11.0 Updating `/tmp/jl_GN4PFJ/Manifest.toml` [47edcb42] + ADTypes v1.16.0 [621f4979] + AbstractFFTs v1.5.0 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.19.0 [07f847a3] + BasisFunctionExpansions v1.1.1 [e1450e63] + BufferedStreams v1.2.2 [aafaddc9] + CatIndices v0.2.2 ⌅ [aaaa29a8] + Clustering v0.14.4 [944b1d66] + CodecZlib v0.7.8 ⌅ [3da002f7] + ColorTypes v0.10.12 ⌃ [c3611d14] + ColorVectorSpace v0.10.0 ⌃ [5ae59095] + Colors v0.12.11 [861a8166] + Combinatorics v1.0.3 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.0 [a33af91c] + CompositionsBase v0.1.2 [ed09eef8] + ComputationalResources v0.3.2 [8f4d0f93] + Conda v1.10.2 [187b0558] ↑ ConstructionBase v1.5.6 ⇒ v1.6.0 [dc8bdbbb] + CustomUnitRanges v1.0.2 ⌅ [717857b8] + DSP v0.7.10 [9a962f9c] + DataAPI v1.16.0 ⌅ [864edb3b] + DataStructures v0.18.22 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.4 [6e83dbb3] + Discretizers v3.2.4 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [4f61f5a4] + FFTViews v0.3.2 [7a1cc6ca] + FFTW v1.9.0 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [53c48c17] + FixedPointNumbers v0.8.5 ⌅ [f6369f11] + ForwardDiff v0.10.38 [f67ccb44] + HDF5 v0.17.2 [34004b35] + HypergeometricFunctions v0.3.28 [09f84164] + HypothesisTests v0.11.5 [615f187c] + IfElse v0.1.1 [c817782e] + ImageBase v0.1.7 [a09fc81d] + ImageCore v0.10.5 [6a3955dd] + ImageFiltering v0.7.10 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [c8e1da08] + IterTools v1.10.0 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v0.21.4 [b964fa9f] + LaTeXStrings v1.4.0 [d3d80556] + LineSearches v7.4.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [23992714] + MAT v0.10.7 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [dbb5928d] + MappedArrays v0.4.2 [e1d29d7a] + Missings v1.2.0 [e94cdb99] + MosaicViews v0.3.4 [0db19996] + NBInclude v2.4.0 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [b8a86587] + NearestNeighbors v0.4.22 [6fe1bfb0] + OffsetArrays v1.17.0 [429524aa] + Optim v1.13.2 [bac558e1] ↑ OrderedCollections v1.6.3 ⇒ v1.8.1 [90014a1f] + PDMats v0.11.35 [5432bcbf] + PaddedViews v0.5.12 [69de0a69] + Parsers v2.8.3 [f27b6e38] + Polynomials v4.1.0 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [43287f4e] + PtrArrays v1.3.0 [c2542da2] + PulseInputDDM v0.4.5 [438e738f] + PyCall v1.96.4 [d330b81b] + PyPlot v2.11.6 [1fd47b50] + QuadGK v2.11.2 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [f2b01f46] + Roots v2.2.8 [efcf1570] + Setfield v1.1.2 [b85f4697] + SoftGlobalScope v1.1.0 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.5.1 [cae243ae] + StackViews v0.1.2 [aedffcd0] + Static v1.2.0 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.14 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 ⌅ [2913bbd2] + StatsBase v0.33.21 [4c63d2b9] + StatsFuns v1.5.0 ⌅ [6aa5eb33] + TaylorSeries v0.18.5 [62fd8b95] + TensorCore v0.1.1 [06e1c1a7] + TiledIteration v0.5.0 [3bb67fe8] + TranscodingStreams v0.11.3 [81def892] + VersionParsing v1.3.0 [f5851436] + FFTW_jll v3.3.11+0 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.1+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [856f044c] + MKL_jll v2025.2.0+0 [7cb0a576] + MPICH_jll v4.3.1+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.8+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [477f73a3] + libaec_jll v1.1.3+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] ~ Artifacts ⇒ v1.11.0 [2a0f44e3] ~ Base64 ⇒ v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] ~ InteractiveUtils ⇒ v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] ~ Libdl ⇒ v1.11.0 [37e2e46d] ~ LinearAlgebra ⇒ v1.13.0 [56ddb016] ~ Logging ⇒ v1.11.0 [d6f4376e] ~ Markdown ⇒ v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] ~ Random ⇒ v1.11.0 [9e88b42a] ~ Serialization ⇒ v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] ~ Test ⇒ v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] ↑ CompilerSupportLibraries_jll v1.1.0+0 ⇒ v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+1 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.7.15 [4536629a] ↑ OpenBLAS_jll v0.3.23+4 ⇒ v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [efcefdf7] + PCRE2_jll v10.45.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] ↑ libblastrampoline_jll v5.8.0+1 ⇒ v5.13.1+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_GN4PFJ/Project.toml` [4c728ea3] Flatten v0.4.3 [d96e819e] Parameters v0.12.3 [c2542da2] PulseInputDDM v0.4.5 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_GN4PFJ/Manifest.toml` [47edcb42] ADTypes v1.16.0 [621f4979] AbstractFFTs v1.5.0 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [4fba245c] ArrayInterface v7.19.0 [07f847a3] BasisFunctionExpansions v1.1.1 [e1450e63] BufferedStreams v1.2.2 [aafaddc9] CatIndices v0.2.2 ⌅ [aaaa29a8] Clustering v0.14.4 [944b1d66] CodecZlib v0.7.8 ⌅ [3da002f7] ColorTypes v0.10.12 ⌃ [c3611d14] ColorVectorSpace v0.10.0 ⌃ [5ae59095] Colors v0.12.11 [861a8166] Combinatorics v1.0.3 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.0 [a33af91c] CompositionsBase v0.1.2 [ed09eef8] ComputationalResources v0.3.2 [8f4d0f93] Conda v1.10.2 [187b0558] ConstructionBase v1.6.0 [dc8bdbbb] CustomUnitRanges v1.0.2 ⌅ [717857b8] DSP v0.7.10 [9a962f9c] DataAPI v1.16.0 ⌅ [864edb3b] DataStructures v0.18.22 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.4 [6e83dbb3] Discretizers v3.2.4 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.5 [4f61f5a4] FFTViews v0.3.2 [7a1cc6ca] FFTW v1.9.0 [bf96fef3] FieldMetadata v0.3.1 [1a297f60] FillArrays v1.13.0 [6a86dc24] FiniteDiff v2.27.0 [53c48c17] FixedPointNumbers v0.8.5 [4c728ea3] Flatten v0.4.3 ⌅ [f6369f11] ForwardDiff v0.10.38 [f67ccb44] HDF5 v0.17.2 [34004b35] HypergeometricFunctions v0.3.28 [09f84164] HypothesisTests v0.11.5 [615f187c] IfElse v0.1.1 [c817782e] ImageBase v0.1.7 [a09fc81d] ImageCore v0.10.5 [6a3955dd] ImageFiltering v0.7.10 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.4 [c8e1da08] IterTools v1.10.0 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v0.21.4 [b964fa9f] LaTeXStrings v1.4.0 [d3d80556] LineSearches v7.4.0 [2ab3a3ac] LogExpFunctions v0.3.29 [23992714] MAT v0.10.7 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.16 [dbb5928d] MappedArrays v0.4.2 [e1d29d7a] Missings v1.2.0 [e94cdb99] MosaicViews v0.3.4 [0db19996] NBInclude v2.4.0 [d41bc354] NLSolversBase v7.10.0 [77ba4419] NaNMath v1.1.3 [b8a86587] NearestNeighbors v0.4.22 [6fe1bfb0] OffsetArrays v1.17.0 [429524aa] Optim v1.13.2 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.35 [5432bcbf] PaddedViews v0.5.12 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [f27b6e38] Polynomials v4.1.0 [85a6dd25] PositiveFactorizations v0.2.4 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [43287f4e] PtrArrays v1.3.0 [c2542da2] PulseInputDDM v0.4.5 [438e738f] PyCall v1.96.4 [d330b81b] PyPlot v2.11.6 [1fd47b50] QuadGK v2.11.2 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 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OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [477f73a3] libaec_jll v1.1.3+0 [1317d2d5] oneTBB_jll v2022.0.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.7.15 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.1+0 [efcefdf7] PCRE2_jll v10.45.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... choice_model: Test Failed at /home/pkgeval/.julia/packages/PulseInputDDM/UyLij/test/choice_model_tests.jl:14 Expression: round(loglikelihood(model_gen, data), digits = 2) ≈ -0.79 Evaluated: -1.46 ≈ -0.79 Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:745 [inlined] [2] macro expansion @ ./timing.jl:645 [inlined] [3] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/choice_model_tests.jl:353 [4] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [5] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:6 [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [7] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:11 [inlined] [8] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [9] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:11 [inlined] 11.881476 seconds (4.86 M allocations: 293.269 MiB, 1.11% gc time, 97.01% compilation time: <1% of which was recompilation) choice_model: Test Failed at /home/pkgeval/.julia/packages/PulseInputDDM/UyLij/test/choice_model_tests.jl:16 Expression: round(norm(gradient(model_gen, data)), digits = 2) ≈ 0.67 Evaluated: 0.26 ≈ 0.67 Stacktrace: [1] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/choice_model_tests.jl:533 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:745 [inlined] [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [4] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:6 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [6] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:11 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [8] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:11 [inlined] ┌ Warning: x_tol is deprecated. Use x_abstol or x_reltol instead. The provided value (1.0e-10) will be used as x_abstol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:110 ┌ Warning: f_tol is deprecated. Use f_abstol or f_reltol instead. The provided value (1.0e-9) will be used as f_reltol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:120 ┌ Warning: outer_x_tol is deprecated. Use outer_x_abstol or outer_x_reltol instead. The provided value (1.0e-10) will be used as x_abstol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:126 ┌ Warning: outer_g_tol is deprecated. Use outer_g_abstol instead. The provided value (1.0e-8) will be used as x_abstol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:132 ┌ Warning: outer_f_tol is deprecated. Use outer_f_abstol or outer_f_reltol instead. The provided value (1.0e-9) will be used as outer_f_reltol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:138 Fminbox ------- Initial mu = 4.18222e-5 Fminbox iteration 1 ------------------- Calling inner optimizer with mu = 4.18222e-5 (numbers below include barrier contribution) Iter Function value Gradient norm 0 2.209994e+00 1.378246e+01 * time: 0.17426609992980957 Exiting inner optimizer with x = [0.09810645502138826, 15.001486732886702, -0.0774653138064881, 20.00231665172351, 0.5692373903471067, 0.03428590719116231, 0.8600818231337759, -0.6526417729954179, 0.26516981749424645] Current distance to box: 0.0242859 Decreasing barrier term μ. choice_model: Test Failed at /home/pkgeval/.julia/packages/PulseInputDDM/UyLij/test/choice_model_tests.jl:29 Expression: round(norm(H), digits = 2) ≈ 7.62 Evaluated: 0.13 ≈ 7.62 Stacktrace: [1] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/choice_model_tests.jl:533 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:745 [inlined] [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [4] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:6 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [6] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:11 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [8] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:11 [inlined] ┌ Warning: Hessian is not positive definite. Approximated by closest PSD matrix. │ ||ϵ||/||H|| is 3.8812391442821337 └ @ PulseInputDDM ~/.julia/packages/PulseInputDDM/UyLij/src/base_model.jl:19 choice_model: Test Failed at /home/pkgeval/.julia/packages/PulseInputDDM/UyLij/test/choice_model_tests.jl:33 Expression: round(norm(CI), digits = 2) ≈ 1503.7 Evaluated: 2491.79 ≈ 1503.7 Stacktrace: [1] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/choice_model_tests.jl:533 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:745 [inlined] [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [4] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:6 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [6] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:11 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [8] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:11 [inlined] neural_model: Test Failed at /home/pkgeval/.julia/packages/PulseInputDDM/UyLij/test/neural_model_tests.jl:16 Expression: all(spikes .== [[5], [16], [4], [2, 2], [17, 15], [19, 16], [8, 13]]) Evaluated: all(Bool[0, 0, 0, 0, 0, 0, 0]) Stacktrace: [1] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/neural_model_tests.jl:533 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:745 [inlined] [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [4] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:6 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [6] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:17 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [8] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:17 [inlined] neural_model: Test Failed at /home/pkgeval/.julia/packages/PulseInputDDM/UyLij/test/neural_model_tests.jl:18 Expression: round(loglikelihood(model_gen, data), digits = 2) ≈ -319.64 Evaluated: -298.0 ≈ -319.64 Stacktrace: [1] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/neural_model_tests.jl:533 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:745 [inlined] [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [4] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:6 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [6] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:17 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [8] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:17 [inlined] neural_model: Test Failed at /home/pkgeval/.julia/packages/PulseInputDDM/UyLij/test/neural_model_tests.jl:20 Expression: round(norm(gradient(model_gen, data)), digits = 2) ≈ 32.68 Evaluated: 37.06 ≈ 32.68 Stacktrace: [1] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/neural_model_tests.jl:533 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:745 [inlined] [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [4] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:6 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [6] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:17 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [8] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:17 [inlined] neural_model: Test Failed at /home/pkgeval/.julia/packages/PulseInputDDM/UyLij/test/neural_model_tests.jl:23 Expression: round(loglikelihood(x, model_gen, data), digits = 2) ≈ -319.64 Evaluated: -298.0 ≈ -319.64 Stacktrace: [1] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/neural_model_tests.jl:533 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:745 [inlined] [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [4] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:6 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [6] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:17 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [8] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:17 [inlined] neural_model: Test Failed at /home/pkgeval/.julia/packages/PulseInputDDM/UyLij/test/neural_model_tests.jl:26 Expression: round(norm(θy0), digits = 2) ≈ 38.43 Evaluated: 42.19 ≈ 38.43 Stacktrace: [1] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/neural_model_tests.jl:533 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:745 [inlined] [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [4] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:6 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [6] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:17 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [8] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:17 [inlined] neural_model: Test Failed at /home/pkgeval/.julia/packages/PulseInputDDM/UyLij/test/neural_model_tests.jl:34 Expression: round(loglikelihood(model0, data), digits = 2) ≈ -1495.92 Evaluated: -1175.39 ≈ -1495.92 Stacktrace: [1] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/neural_model_tests.jl:533 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:745 [inlined] [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [4] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:6 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [6] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:17 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [8] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:17 [inlined] neural_model: Test Failed at /home/pkgeval/.julia/packages/PulseInputDDM/UyLij/test/neural_model_tests.jl:39 Expression: round(loglikelihood(x0, model0, data), digits = 2) ≈ -1495.92 Evaluated: -1175.39 ≈ -1495.92 Stacktrace: [1] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/neural_model_tests.jl:533 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:745 [inlined] [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [4] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:6 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [6] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:17 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [8] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:17 [inlined] ┌ Warning: x_tol is deprecated. Use x_abstol or x_reltol instead. The provided value (1.0e-10) will be used as x_abstol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:110 ┌ Warning: f_tol is deprecated. Use f_abstol or f_reltol instead. The provided value (1.0e-6) will be used as f_reltol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:120 ┌ Warning: outer_x_tol is deprecated. Use outer_x_abstol or outer_x_reltol instead. The provided value (1.0e-10) will be used as x_abstol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:126 ┌ Warning: outer_g_tol is deprecated. Use outer_g_abstol instead. The provided value (1.0e-8) will be used as x_abstol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:132 ┌ Warning: outer_f_tol is deprecated. Use outer_f_abstol or outer_f_reltol instead. The provided value (1.0e-6) will be used as outer_f_reltol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:138 neural_model: Test Failed at /home/pkgeval/.julia/packages/PulseInputDDM/UyLij/test/neural_model_tests.jl:42 Expression: round(norm(PulseInputDDM.flatten(model.θ)), digits = 2) ≈ 58.28 Evaluated: 58.3 ≈ 58.28 Stacktrace: [1] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/neural_model_tests.jl:533 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:745 [inlined] [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [4] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:6 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [6] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:17 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [8] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:17 [inlined] ┌ Warning: x_tol is deprecated. Use x_abstol or x_reltol instead. The provided value (1.0e-10) will be used as x_abstol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:110 ┌ Warning: f_tol is deprecated. Use f_abstol or f_reltol instead. The provided value (1.0e-9) will be used as f_reltol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:120 ┌ Warning: outer_x_tol is deprecated. Use outer_x_abstol or outer_x_reltol instead. The provided value (1.0e-10) will be used as x_abstol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:126 ┌ Warning: outer_g_tol is deprecated. Use outer_g_abstol instead. The provided value (1.0e-8) will be used as x_abstol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:132 ┌ Warning: outer_f_tol is deprecated. Use outer_f_abstol or outer_f_reltol instead. The provided value (1.0e-9) will be used as outer_f_reltol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:138 Fminbox ------- Initial mu = 0.00071199 Fminbox iteration 1 ------------------- Calling inner optimizer with mu = 0.00071199 (numbers below include barrier contribution) Iter Function value Gradient norm 0 3.329023e+02 2.208378e+02 * time: 8.20159912109375e-5 Exiting inner optimizer with x = [0.23563054893940605, 15.005747056931407, -0.18296901549558223, 20.007469946649444, 0.5991331859789704, 0.12124286994018629, 0.8483941652777358, -15.250490804300949, 28.681492021367163, 1.8647501822565453, 0.7540319194829838, 4.791300923514843, 29.32551435213429, 0.6152644544065928, 7.3342620700235175, -1.2187502761856361, 19.017275617640276, -1.390384290145338, 9.680396988929592] Current distance to box: 0.111243 Decreasing barrier term μ. neural_model: Test Failed at /home/pkgeval/.julia/packages/PulseInputDDM/UyLij/test/neural_model_tests.jl:51 Expression: round(norm(PulseInputDDM.flatten(model.θ)), digits = 2) ≈ 55.53 Evaluated: 55.51 ≈ 55.53 Stacktrace: [1] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/neural_model_tests.jl:533 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:745 [inlined] [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [4] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:6 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [6] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:17 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [8] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:17 [inlined] neural_model: Test Failed at /home/pkgeval/.julia/packages/PulseInputDDM/UyLij/test/neural_model_tests.jl:54 Expression: round(norm(H), digits = 2) ≈ 8.6 Evaluated: 43.39 ≈ 8.6 Stacktrace: [1] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/neural_model_tests.jl:533 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:745 [inlined] [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [4] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:6 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [6] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:17 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [8] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:17 [inlined] ┌ Warning: Hessian is not positive definite. Approximated by closest PSD matrix. │ ||ϵ||/||H|| is 4.286895198420207 └ @ PulseInputDDM ~/.julia/packages/PulseInputDDM/UyLij/src/base_model.jl:19 neural_model: Test Failed at /home/pkgeval/.julia/packages/PulseInputDDM/UyLij/test/neural_model_tests.jl:57 Expression: round(norm(CI), digits = 2) ≈ 1149.39 Evaluated: 701.38 ≈ 1149.39 Stacktrace: [1] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/neural_model_tests.jl:533 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:745 [inlined] [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [4] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:6 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [6] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:17 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [8] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:17 [inlined] joint_model: Test Failed at /home/pkgeval/.julia/packages/PulseInputDDM/UyLij/test/joint_model_tests.jl:12 Expression: all(spikes .== [[5], [16], [4], [2, 2], [17, 15], [19, 16], [8, 13]]) Evaluated: all(Bool[0, 0, 0, 0, 0, 0, 0]) Stacktrace: [1] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/joint_model_tests.jl:533 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:745 [inlined] [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [4] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:6 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [6] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:23 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [8] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:23 [inlined] ┌ Warning: x_tol is deprecated. Use x_abstol or x_reltol instead. The provided value (1.0e-10) will be used as x_abstol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:110 ┌ Warning: f_tol is deprecated. Use f_abstol or f_reltol instead. The provided value (1.0e-6) will be used as f_reltol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:120 ┌ Warning: outer_x_tol is deprecated. Use outer_x_abstol or outer_x_reltol instead. The provided value (1.0e-10) will be used as x_abstol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:126 ┌ Warning: outer_g_tol is deprecated. Use outer_g_abstol instead. The provided value (1.0e-8) will be used as x_abstol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:132 ┌ Warning: outer_f_tol is deprecated. Use outer_f_abstol or outer_f_reltol instead. The provided value (1.0e-6) will be used as outer_f_reltol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:138 ┌ Warning: x_tol is deprecated. Use x_abstol or x_reltol instead. The provided value (1.0e-10) will be used as x_abstol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:110 ┌ Warning: f_tol is deprecated. Use f_abstol or f_reltol instead. The provided value (1.0e-9) will be used as f_reltol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:120 ┌ Warning: outer_x_tol is deprecated. Use outer_x_abstol or outer_x_reltol instead. The provided value (1.0e-10) will be used as x_abstol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:126 ┌ Warning: outer_g_tol is deprecated. Use outer_g_abstol instead. The provided value (1.0e-8) will be used as x_abstol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:132 ┌ Warning: outer_f_tol is deprecated. Use outer_f_abstol or outer_f_reltol instead. The provided value (1.0e-9) will be used as outer_f_reltol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:138 Fminbox ------- Initial mu = 0.00071199 Fminbox iteration 1 ------------------- Calling inner optimizer with mu = 0.00071199 (numbers below include barrier contribution) Iter Function value Gradient norm 0 3.329023e+02 2.208378e+02 * time: 2.3126602172851562e-5 Exiting inner optimizer with x = [0.23563054893940605, 15.005747056931407, -0.18296901549558223, 20.007469946649444, 0.5991331859789704, 0.12124286994018629, 0.8483941652777358, -15.250490804300949, 28.681492021367163, 1.8647501822565453, 0.7540319194829838, 4.791300923514843, 29.32551435213429, 0.6152644544065928, 7.3342620700235175, -1.2187502761856361, 19.017275617640276, -1.390384290145338, 9.680396988929592] Current distance to box: 0.111243 Decreasing barrier term μ. joint_model: Test Failed at /home/pkgeval/.julia/packages/PulseInputDDM/UyLij/test/joint_model_tests.jl:32 Expression: round(choice_loglikelihood(choice_neural_model, data), digits = 2) ≈ -0.44 Evaluated: -0.61 ≈ -0.44 Stacktrace: [1] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/joint_model_tests.jl:533 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:745 [inlined] [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [4] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:6 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [6] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:23 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [8] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:23 [inlined] joint_model: Test Failed at /home/pkgeval/.julia/packages/PulseInputDDM/UyLij/test/joint_model_tests.jl:34 Expression: round(joint_loglikelihood(choice_neural_model, data), digits = 2) ≈ -368.03 Evaluated: -333.57 ≈ -368.03 Stacktrace: [1] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/joint_model_tests.jl:533 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:745 [inlined] [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [4] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:6 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [6] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:23 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [8] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:23 [inlined] ┌ Warning: x_tol is deprecated. Use x_abstol or x_reltol instead. The provided value (1.0e-10) will be used as x_abstol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:110 ┌ Warning: f_tol is deprecated. Use f_abstol or f_reltol instead. The provided value (1.0e-9) will be used as f_reltol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:120 ┌ Warning: outer_x_tol is deprecated. Use outer_x_abstol or outer_x_reltol instead. The provided value (1.0e-10) will be used as x_abstol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:126 ┌ Warning: outer_g_tol is deprecated. Use outer_g_abstol instead. The provided value (1.0e-8) will be used as x_abstol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:132 ┌ Warning: outer_f_tol is deprecated. Use outer_f_abstol or outer_f_reltol instead. The provided value (1.0e-9) will be used as outer_f_reltol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:138 ┌ Warning: Initial position cannot be on the boundary of the box. Moving elements to the interior. │ Element indices affected: [2] └ @ Optim ~/.julia/packages/Optim/7krni/src/multivariate/solvers/constrained/fminbox.jl:441 Fminbox ------- Initial mu = 3.20108e-5 Fminbox iteration 1 ------------------- Calling inner optimizer with mu = 3.20108e-5 (numbers below include barrier contribution) Iter Function value Gradient norm 0 6.384559e-01 3.159765e+00 * time: 3.0040740966796875e-5 Exiting inner optimizer with x = [0.0005081586842164796, 0.0016429155724040838] Current distance to box: 0.00164292 Decreasing barrier term μ. joint_model: Test Failed at /home/pkgeval/.julia/packages/PulseInputDDM/UyLij/test/joint_model_tests.jl:41 Expression: round(norm(PulseInputDDM.flatten(choice_neural_model.θ)), digits = 2) ≈ 55.87 Evaluated: 55.89 ≈ 55.87 Stacktrace: [1] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/joint_model_tests.jl:533 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:745 [inlined] [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [4] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:6 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [6] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:23 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [8] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:23 [inlined] ┌ Warning: x_tol is deprecated. Use x_abstol or x_reltol instead. The provided value (1.0e-10) will be used as x_abstol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:110 ┌ Warning: f_tol is deprecated. Use f_abstol or f_reltol instead. The provided value (1.0e-9) will be used as f_reltol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:120 ┌ Warning: outer_x_tol is deprecated. Use outer_x_abstol or outer_x_reltol instead. The provided value (1.0e-10) will be used as x_abstol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:126 ┌ Warning: outer_g_tol is deprecated. Use outer_g_abstol instead. The provided value (1.0e-8) will be used as x_abstol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:132 ┌ Warning: outer_f_tol is deprecated. Use outer_f_abstol or outer_f_reltol instead. The provided value (1.0e-9) will be used as outer_f_reltol. └ @ Optim ~/.julia/packages/Optim/7krni/src/types.jl:138 ┌ Warning: Initial position cannot be on the boundary of the box. Moving elements to the interior. │ Element indices affected: [9] └ @ Optim ~/.julia/packages/Optim/7krni/src/multivariate/solvers/constrained/fminbox.jl:441 Fminbox ------- Initial mu = 2.49061e-5 Fminbox iteration 1 ------------------- Calling inner optimizer with mu = 2.49061e-5 (numbers below include barrier contribution) Iter Function value Gradient norm 0 6.362525e-01 5.852980e+00 * time: 1.71661376953125e-5 Exiting inner optimizer with x = [0.10000027088207711, 15.000007576148604, -0.09991676228199418, 19.9999977941414, 0.4998856804561833, 0.7999821995495784, 0.005044533104626309, 4.3514379600828354e-5, 0.008263279681446982, -15.533520245978446, 28.42000738756388, 1.7088690300466096, 0.3435831765044327, 5.490224316412395, 30.023106670146348, 0.37815786804530316, 7.372580469582232, -1.1895122593915861, 19.050584323638212, -1.4489940054831623, 9.674301860072665] Current distance to box: 4.45331e-5 Decreasing barrier term μ. joint_model: Test Failed at /home/pkgeval/.julia/packages/PulseInputDDM/UyLij/test/joint_model_tests.jl:50 Expression: round(norm(PulseInputDDM.flatten(choice_neural_model.θ)), digits = 2) ≈ 55.87 Evaluated: 55.89 ≈ 55.87 Stacktrace: [1] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/joint_model_tests.jl:533 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:745 [inlined] [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [4] top-level scope @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:6 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [6] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:23 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined] [8] macro expansion @ ~/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:23 [inlined] Test Summary: | Pass Fail Total Time PulseInputDDM | 3 20 23 4m58.4s choice_model | 2 4 6 1m42.9s neural_model | 11 11 2m19.3s joint_model | 5 5 54.3s RNG of the outermost testset: Xoshiro(0x94d6c803c4aa38c3, 0xcd96e4c55d6701db, 0xd85fcfeaca35b4e0, 0x5c2467bdb5f03fe2, 0xbc795c19c97d85e2) ERROR: LoadError: Some tests did not pass: 3 passed, 20 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/PulseInputDDM/UyLij/test/runtests.jl:3 Testing failed after 342.28s ERROR: LoadError: Package PulseInputDDM errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2695 [3] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2544 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:538 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:515 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:168 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:157 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [9] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:311 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:320 [14] _start() @ Base ./client.jl:553 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 957.8s: package has test failures