Package evaluation of OnlinePCA on Julia 1.13.0-DEV.971 (04e26c5eae*) started at 2025-08-11T00:16:43.363 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.87s ################################################################################ # Installation # Installing OnlinePCA... Resolving package versions... Installed Rmath_jll ─────────────────── v0.5.1+0 Installed CodecZstd ─────────────────── v0.8.6 Installed MacroTools ────────────────── v0.5.16 Installed URIs ──────────────────────── v1.6.1 Installed FilePathsBase ─────────────── v0.9.24 Installed DataStructures ────────────── v0.18.22 Installed libaec_jll ────────────────── v1.1.3+0 Installed Mux ───────────────────────── v1.0.2 Installed InlineStrings ─────────────── v1.4.4 Installed GLM ───────────────────────── v1.9.0 Installed FillArrays ────────────────── v1.13.0 Installed MPICH_jll ─────────────────── v4.3.1+0 Installed AliasTables ───────────────── v1.1.3 Installed HypergeometricFunctions ───── v0.3.28 Installed DelimitedFiles ────────────── v1.9.1 Installed StatsBase ─────────────────── v0.34.6 Installed StatsModels ───────────────── v0.7.5 Installed CodecZlib ─────────────────── v0.7.8 Installed ConcurrentUtilities ───────── v2.5.0 Installed Observables ───────────────── v0.5.5 Installed MicrosoftMPI_jll ──────────── v10.1.4+3 Installed ExceptionUnwrapping ───────── v0.1.11 Installed Compat ────────────────────── v4.18.0 Installed OrderedCollections ────────── v1.8.1 Installed TranscodingStreams ────────── v0.11.3 Installed ShiftedArrays ─────────────── v2.0.0 Installed Kaleido_jll ───────────────── v0.2.1+0 Installed TensorCore ────────────────── v0.1.1 Installed Statistics ────────────────── v1.11.1 Installed InvertedIndices ───────────── v1.3.1 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed DataAPI ───────────────────── v1.16.0 Installed WebSockets ────────────────── v1.6.0 Installed FunctionalCollections ─────── v0.5.0 Installed OnlinePCA ─────────────────── v0.3.10 Installed PrecompileTools ───────────── v1.3.2 Installed StatsAPI ──────────────────── v1.7.1 Installed Hiccup ────────────────────── v0.2.2 Installed ProgressMeter ─────────────── v1.10.4 Installed SentinelArrays ────────────── v1.4.8 Installed MbedTLS ───────────────────── v1.1.9 Installed OpenSSL ───────────────────── v1.5.0 Installed DataValueInterfaces ───────── v1.0.0 Installed TextWrap ──────────────────── v1.0.2 Installed LoggingExtras ─────────────── v1.1.0 Installed Colors ────────────────────── v0.13.1 Installed AssetRegistry ─────────────── v0.1.0 Installed IrrationalConstants ───────── v0.2.4 Installed QuadGK ────────────────────── v2.11.2 Installed ColorTypes ────────────────── v0.12.1 Installed ColorVectorSpace ──────────── v0.11.0 Installed StringManipulation ────────── v0.4.1 Installed Pidfile ───────────────────── v1.3.0 Installed HTTP ──────────────────────── v1.10.17 Installed Widgets ───────────────────── v0.6.7 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed Requires ──────────────────── v1.3.1 Installed ArgParse ──────────────────── v1.2.0 Installed LogExpFunctions ───────────── v0.3.29 Installed HDF5_jll ──────────────────── v1.14.6+0 Installed BitFlags ──────────────────── v0.1.9 Installed OpenMPI_jll ───────────────── v5.0.8+0 Installed Hwloc_jll ─────────────────── v2.12.1+0 Installed Parsers ───────────────────── v2.8.3 Installed JSON ──────────────────────── v0.21.4 Installed PrettyTables ──────────────── v2.4.0 Installed Rmath ─────────────────────── v0.8.0 Installed Distributions ─────────────── v0.25.120 Installed MatrixMarket ──────────────── v0.5.2 Installed Parameters ────────────────── v0.12.3 Installed PlotlyKaleido ─────────────── v2.3.0 Installed StatsFuns ─────────────────── v1.5.0 Installed PtrArrays ─────────────────── v1.3.0 Installed Tables ────────────────────── v1.12.1 Installed Reexport ──────────────────── v1.2.2 Installed SpecialFunctions ──────────── v2.5.1 Installed Blink ─────────────────────── v0.12.9 Installed PlotlyBase ────────────────── v0.8.21 Installed Preferences ───────────────── v1.4.3 Installed FixedPointNumbers ─────────── v0.8.5 Installed WebIO ─────────────────────── v0.8.21 Installed DataFrames ────────────────── v1.7.0 Installed MPIPreferences ────────────── v0.1.11 Installed SimpleBufferStream ────────── v1.2.0 Installed Missings ──────────────────── v1.2.0 Installed JSExpr ────────────────────── v0.5.4 Installed PooledArrays ──────────────── v1.4.3 Installed CSV ───────────────────────── v0.10.15 Installed WeakRefStrings ────────────── v1.4.2 Installed JLLWrappers ───────────────── v1.7.1 Installed TableTraits ───────────────── v1.0.1 Installed LaTeXStrings ──────────────── v1.4.0 Installed MbedTLS_jll ───────────────── v2.28.6+2 Installed Mustache ──────────────────── v1.0.21 Installed PDMats ────────────────────── v0.11.35 Installed Crayons ───────────────────── v4.1.1 Installed MPItrampoline_jll ─────────── v5.5.4+0 Installed SortingAlgorithms ─────────── v1.2.2 Installed Lazy ──────────────────────── v0.15.1 Installed UnPack ────────────────────── v1.0.2 Installed DocStringExtensions ───────── v0.9.5 Installed WorkerUtilities ───────────── v1.6.1 Installed HDF5 ──────────────────────── v0.17.2 Installed PlotlyJS ──────────────────── v0.18.17 Installed ColorSchemes ──────────────── v3.30.0 Installing 14 artifacts Installed artifact libaec 96.2 KiB Installed artifact Rmath 121.9 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact web 215.6 KiB Installed artifact mathjax 18.7 KiB Installed artifact plotly-artifacts 1.7 MiB Installed artifact plotly-base-artifacts 430.0 KiB Installed artifact MbedTLS 2.1 MiB Installed artifact Hwloc 3.5 MiB Installed artifact plotly 2.3 MiB Installed artifact MPICH 3.3 MiB Installed artifact HDF5 5.7 MiB Installed artifact Kaleido 75.3 MiB Installed artifact electronjs_app 79.1 MiB Updating `~/.julia/environments/v1.13/Project.toml` [975b03d1] + OnlinePCA v0.3.10 Updating `~/.julia/environments/v1.13/Manifest.toml` [66dad0bd] + AliasTables v1.1.3 [c7e460c6] + ArgParse v1.2.0 [bf4720bc] + AssetRegistry v0.1.0 [d1d4a3ce] + BitFlags v0.1.9 [ad839575] + Blink v0.12.9 [336ed68f] + CSV v0.10.15 [944b1d66] + CodecZlib v0.7.8 [6b39b394] + CodecZstd v0.8.6 [35d6a980] + ColorSchemes v3.30.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [34da2185] + Compat v4.18.0 [f0e56b4a] + ConcurrentUtilities v2.5.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.7.0 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [460bff9d] + ExceptionUnwrapping v0.1.11 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.13.0 [53c48c17] + FixedPointNumbers v0.8.5 [de31a74c] + FunctionalCollections v0.5.0 [38e38edf] + GLM v1.9.0 [f67ccb44] + HDF5 v0.17.2 [cd3eb016] + HTTP v1.10.17 [9fb69e20] + Hiccup v0.2.2 [34004b35] + HypergeometricFunctions v0.3.28 [842dd82b] + InlineStrings v1.4.4 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [97c1335a] + JSExpr v0.5.4 [682c06a0] + JSON v0.21.4 [b964fa9f] + LaTeXStrings v1.4.0 [50d2b5c4] + Lazy v0.15.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.1.0 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [4d4711f2] + MatrixMarket v0.5.2 [739be429] + MbedTLS v1.1.9 [e1d29d7a] + Missings v1.2.0 [ffc61752] + Mustache v1.0.21 [a975b10e] + Mux v1.0.2 [510215fc] + Observables v0.5.5 [975b03d1] + OnlinePCA v0.3.10 [4d8831e6] + OpenSSL v1.5.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [fa939f87] + Pidfile v1.3.0 [a03496cd] + PlotlyBase v0.8.21 [f0f68f2c] + PlotlyJS v0.18.17 [f2990250] + PlotlyKaleido v2.3.0 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [92933f4c] + ProgressMeter v1.10.4 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [91c51154] + SentinelArrays v1.4.8 [1277b4bf] + ShiftedArrays v2.0.0 [777ac1f9] + SimpleBufferStream v1.2.0 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.5.1 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.6 [4c63d2b9] + StatsFuns v1.5.0 [3eaba693] + StatsModels v0.7.5 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [62fd8b95] + TensorCore v0.1.1 [b718987f] + TextWrap v1.0.2 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [ea10d353] + WeakRefStrings v1.4.2 [0f1e0344] + WebIO v0.8.21 [104b5d7c] + WebSockets v1.6.0 [cc8bc4a8] + Widgets v0.6.7 [76eceee3] + WorkerUtilities v1.6.1 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.1+0 [f7e6163d] + Kaleido_jll v0.2.1+0 [7cb0a576] + MPICH_jll v4.3.1+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [c8ffd9c3] + MbedTLS_jll v2.28.6+2 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.8+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [477f73a3] + libaec_jll v1.1.3+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+1 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.7.15 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [efcefdf7] + PCRE2_jll v10.45.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building WebIO ───→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/0eef0765186f7452e52236fa42ca8c9b3c11c6e3/build.log` Building PlotlyJS → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/287e092914da6c91f002aafcf82a2ec065bf94a3/build.log` Installation completed after 84.39s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4307.8 ms ✓ TestEnv 1 dependency successfully precompiled in 4 seconds. 27 already precompiled. Precompiling package dependencies... Precompilation completed after 562.46s ################################################################################ # Testing # Testing OnlinePCA Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_bik8Bk/Project.toml` [31c24e10] ↑ Distributions v0.25.111 ⇒ v0.25.120 [1a297f60] ↑ FillArrays v1.12.0 ⇒ v1.13.0 [975b03d1] + OnlinePCA v0.3.10 [10745b16] ↑ Statistics v1.10.0 ⇒ v1.11.1 [37e2e46d] ~ LinearAlgebra ⇒ v1.13.0 [2f01184e] ↑ SparseArrays v1.10.0 ⇒ v1.13.0 [8dfed614] ~ Test ⇒ v1.11.0 Updating `/tmp/jl_bik8Bk/Manifest.toml` [bf4720bc] + AssetRegistry v0.1.0 [d1d4a3ce] + BitFlags v0.1.9 [ad839575] + Blink v0.12.9 [336ed68f] + CSV v0.10.15 [944b1d66] ↑ CodecZlib v0.7.6 ⇒ v0.7.8 [6b39b394] + CodecZstd v0.8.6 [35d6a980] + ColorSchemes v3.30.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [34da2185] ↑ Compat v4.16.0 ⇒ v4.18.0 [f0e56b4a] + ConcurrentUtilities v2.5.0 [a8cc5b0e] + Crayons v4.1.1 [a93c6f00] + DataFrames v1.7.0 ⌅ [864edb3b] ↑ DataStructures v0.18.20 ⇒ v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [31c24e10] ↑ Distributions v0.25.111 ⇒ v0.25.120 [ffbed154] ↑ DocStringExtensions v0.9.3 ⇒ v0.9.5 [460bff9d] + ExceptionUnwrapping v0.1.11 [48062228] + FilePathsBase v0.9.24 [1a297f60] ↑ FillArrays v1.12.0 ⇒ v1.13.0 [53c48c17] + FixedPointNumbers v0.8.5 [de31a74c] + FunctionalCollections v0.5.0 [38e38edf] + GLM v1.9.0 [f67ccb44] + HDF5 v0.17.2 [cd3eb016] + HTTP v1.10.17 [9fb69e20] + Hiccup v0.2.2 [34004b35] ↑ HypergeometricFunctions v0.3.24 ⇒ v0.3.28 [842dd82b] + InlineStrings v1.4.4 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] ↑ IrrationalConstants v0.2.2 ⇒ v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] ↑ JLLWrappers v1.5.0 ⇒ v1.7.1 [97c1335a] + JSExpr v0.5.4 [682c06a0] + JSON v0.21.4 [b964fa9f] + LaTeXStrings v1.4.0 [50d2b5c4] + Lazy v0.15.1 [2ab3a3ac] ↑ LogExpFunctions v0.3.28 ⇒ v0.3.29 [e6f89c97] + LoggingExtras v1.1.0 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [739be429] + MbedTLS v1.1.9 [ffc61752] + Mustache v1.0.21 [a975b10e] + Mux v1.0.2 [510215fc] + Observables v0.5.5 [975b03d1] + OnlinePCA v0.3.10 [4d8831e6] + OpenSSL v1.5.0 [bac558e1] ↑ OrderedCollections v1.6.3 ⇒ v1.8.1 [90014a1f] ↑ PDMats v0.11.31 ⇒ v0.11.35 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [fa939f87] + Pidfile v1.3.0 [a03496cd] + PlotlyBase v0.8.21 [f0f68f2c] + PlotlyJS v0.18.17 [f2990250] + PlotlyKaleido v2.3.0 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.2 [08abe8d2] + PrettyTables v2.4.0 [92933f4c] + ProgressMeter v1.10.4 [43287f4e] ↑ PtrArrays v1.2.0 ⇒ v1.3.0 [1fd47b50] ↑ QuadGK v2.10.1 ⇒ v2.11.2 [ae029012] + Requires v1.3.1 [79098fc4] ↑ Rmath v0.7.1 ⇒ v0.8.0 [91c51154] + SentinelArrays v1.4.8 [1277b4bf] + ShiftedArrays v2.0.0 [777ac1f9] + SimpleBufferStream v1.2.0 [a2af1166] ↑ SortingAlgorithms v1.2.1 ⇒ v1.2.2 [276daf66] ↑ SpecialFunctions v2.4.0 ⇒ v2.5.1 [10745b16] ↑ Statistics v1.10.0 ⇒ v1.11.1 [82ae8749] ↑ StatsAPI v1.7.0 ⇒ v1.7.1 [2913bbd2] ↑ StatsBase v0.34.3 ⇒ v0.34.6 [4c63d2b9] ↑ StatsFuns v1.3.1 ⇒ v1.5.0 [3eaba693] + StatsModels v0.7.5 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [62fd8b95] + TensorCore v0.1.1 [3bb67fe8] ↑ TranscodingStreams v0.11.2 ⇒ v0.11.3 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [ea10d353] + WeakRefStrings v1.4.2 [0f1e0344] + WebIO v0.8.21 [104b5d7c] + WebSockets v1.6.0 [cc8bc4a8] + Widgets v0.6.7 [76eceee3] + WorkerUtilities v1.6.1 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.1+0 [f7e6163d] + Kaleido_jll v0.2.1+0 [7cb0a576] + MPICH_jll v4.3.1+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [c8ffd9c3] ↑ MbedTLS_jll v2.28.2+1 ⇒ v2.28.6+2 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.8+0 [efe28fd5] ↑ OpenSpecFun_jll v0.5.5+0 ⇒ v0.5.6+0 [f50d1b31] ↑ Rmath_jll v0.4.3+0 ⇒ v0.5.1+0 [477f73a3] + libaec_jll v1.1.3+0 [0dad84c5] ↑ ArgTools v1.1.1 ⇒ v1.1.2 [56f22d72] ~ Artifacts ⇒ v1.11.0 [2a0f44e3] ~ Base64 ⇒ v1.11.0 [ade2ca70] ~ Dates ⇒ v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] ↑ Downloads v1.6.0 ⇒ v1.7.0 [7b1f6079] ~ FileWatching ⇒ v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] ~ InteractiveUtils ⇒ v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [76f85450] ~ LibGit2 ⇒ v1.11.0 [8f399da3] ~ Libdl ⇒ v1.11.0 [37e2e46d] ~ LinearAlgebra ⇒ v1.13.0 [56ddb016] ~ Logging ⇒ v1.11.0 [d6f4376e] ~ Markdown ⇒ v1.11.0 [a63ad114] ~ Mmap ⇒ v1.11.0 [ca575930] ↑ NetworkOptions v1.2.0 ⇒ v1.3.0 [44cfe95a] ↑ Pkg v1.10.0 ⇒ v1.13.0 [de0858da] ~ Printf ⇒ v1.11.0 [3fa0cd96] ~ REPL ⇒ v1.11.0 [9a3f8284] ~ Random ⇒ v1.11.0 [9e88b42a] ~ Serialization ⇒ v1.11.0 [6462fe0b] ~ Sockets ⇒ v1.11.0 [2f01184e] ↑ SparseArrays v1.10.0 ⇒ v1.13.0 [f489334b] + StyledStrings v1.11.0 [8dfed614] ~ Test ⇒ v1.11.0 [cf7118a7] ~ UUIDs ⇒ v1.11.0 [4ec0a83e] ~ Unicode ⇒ v1.11.0 [e66e0078] ↑ CompilerSupportLibraries_jll v1.1.1+0 ⇒ v1.3.0+1 [deac9b47] ↑ LibCURL_jll v8.4.0+0 ⇒ v8.15.0+1 [e37daf67] ↑ LibGit2_jll v1.6.4+0 ⇒ v1.9.1+0 [29816b5a] ↑ LibSSH2_jll v1.11.0+1 ⇒ v1.11.3+1 [14a3606d] ↑ MozillaCACerts_jll v2023.1.10 ⇒ v2025.7.15 [4536629a] ↑ OpenBLAS_jll v0.3.23+4 ⇒ v0.3.29+0 [05823500] ↑ OpenLibm_jll v0.8.1+2 ⇒ v0.8.5+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [efcefdf7] + PCRE2_jll v10.45.0+0 [bea87d4a] ↑ SuiteSparse_jll v7.2.1+1 ⇒ v7.10.1+0 [83775a58] ↑ Zlib_jll v1.2.13+1 ⇒ v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] ↑ libblastrampoline_jll v5.8.0+1 ⇒ v5.13.1+0 [8e850ede] ↑ nghttp2_jll v1.52.0+1 ⇒ v1.65.0+0 [3f19e933] ↑ p7zip_jll v17.4.0+2 ⇒ v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_bik8Bk/Project.toml` [c7e460c6] ArgParse v1.2.0 [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.120 [1a297f60] FillArrays v1.13.0 [4d4711f2] MatrixMarket v0.5.2 [975b03d1] OnlinePCA v0.3.10 [10745b16] Statistics v1.11.1 [37e2e46d] LinearAlgebra v1.13.0 [2f01184e] SparseArrays v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_bik8Bk/Manifest.toml` [66dad0bd] AliasTables v1.1.3 [c7e460c6] ArgParse v1.2.0 [bf4720bc] AssetRegistry v0.1.0 [d1d4a3ce] BitFlags v0.1.9 [ad839575] Blink v0.12.9 [336ed68f] CSV v0.10.15 [944b1d66] CodecZlib v0.7.8 [6b39b394] CodecZstd v0.8.6 [35d6a980] ColorSchemes v3.30.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 [34da2185] Compat v4.18.0 [f0e56b4a] ConcurrentUtilities v2.5.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.7.0 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.5 [460bff9d] ExceptionUnwrapping v0.1.11 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.13.0 [53c48c17] FixedPointNumbers v0.8.5 [de31a74c] FunctionalCollections v0.5.0 [38e38edf] GLM v1.9.0 [f67ccb44] HDF5 v0.17.2 [cd3eb016] HTTP v1.10.17 [9fb69e20] Hiccup v0.2.2 [34004b35] HypergeometricFunctions v0.3.28 [842dd82b] InlineStrings v1.4.4 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.4 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [97c1335a] JSExpr v0.5.4 [682c06a0] JSON v0.21.4 [b964fa9f] LaTeXStrings v1.4.0 [50d2b5c4] Lazy v0.15.1 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.1.0 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.16 [4d4711f2] MatrixMarket v0.5.2 [739be429] MbedTLS v1.1.9 [e1d29d7a] Missings v1.2.0 [ffc61752] Mustache v1.0.21 [a975b10e] Mux v1.0.2 [510215fc] Observables v0.5.5 [975b03d1] OnlinePCA v0.3.10 [4d8831e6] OpenSSL v1.5.0 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.35 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [fa939f87] Pidfile v1.3.0 [a03496cd] PlotlyBase v0.8.21 [f0f68f2c] PlotlyJS v0.18.17 [f2990250] PlotlyKaleido v2.3.0 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [92933f4c] ProgressMeter v1.10.4 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.8.0 [91c51154] SentinelArrays v1.4.8 [1277b4bf] ShiftedArrays v2.0.0 [777ac1f9] SimpleBufferStream v1.2.0 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.5.1 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.6 [4c63d2b9] StatsFuns v1.5.0 [3eaba693] StatsModels v0.7.5 [892a3eda] StringManipulation v0.4.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [62fd8b95] TensorCore v0.1.1 [b718987f] TextWrap v1.0.2 [3bb67fe8] TranscodingStreams v0.11.3 [5c2747f8] URIs v1.6.1 [3a884ed6] UnPack v1.0.2 [ea10d353] WeakRefStrings v1.4.2 [0f1e0344] WebIO v0.8.21 [104b5d7c] WebSockets v1.6.0 [cc8bc4a8] Widgets v0.6.7 [76eceee3] WorkerUtilities v1.6.1 [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.1+0 [f7e6163d] Kaleido_jll v0.2.1+0 [7cb0a576] MPICH_jll v4.3.1+0 [f1f71cc9] MPItrampoline_jll v5.5.4+0 [c8ffd9c3] MbedTLS_jll v2.28.6+2 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.8+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [477f73a3] libaec_jll v1.1.3+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.7.15 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.1+0 [efcefdf7] PCRE2_jll v10.45.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... /tmp/jl_BxjJI1 Running all tests... ####### Binarization of CSV (Julia API) ####### 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 ####### Binarization of CSV (Command line) ####### Precompiling packages... 8176.4 ms ✓ MacroTools 2081.2 ms ✓ InlineStrings 1208.4 ms ✓ Reexport 1233.2 ms ✓ TensorCore 4048.1 ms ✓ IrrationalConstants 1059.7 ms ✓ DataValueInterfaces 996.3 ms ✓ StatsAPI 1251.8 ms ✓ Observables 1498.2 ms ✓ TranscodingStreams 1122.8 ms ✓ TextWrap 1099.0 ms ✓ LaTeXStrings 1276.1 ms ✓ Statistics 938.3 ms ✓ PtrArrays 919.3 ms ✓ SimpleBufferStream 1048.8 ms ✓ DataAPI 1473.6 ms ✓ URIs 969.3 ms ✓ InvertedIndices 989.1 ms ✓ BitFlags 983.5 ms ✓ ShiftedArrays 1124.2 ms ✓ WorkerUtilities 2359.5 ms ✓ FillArrays 898.0 ms ✓ UnPack 1353.0 ms ✓ OrderedCollections 1234.9 ms ✓ DocStringExtensions 800.3 ms ✓ IteratorInterfaceExtensions 5481.5 ms ✓ Crayons 1078.4 ms ✓ DelimitedFiles 2231.6 ms ✓ Requires 1662.4 ms ✓ ConcurrentUtilities 1197.1 ms ✓ SuiteSparse 6112.9 ms ✓ SentinelArrays 1122.4 ms ✓ LoggingExtras 1746.0 ms ✓ ProgressMeter 1181.5 ms ✓ Compat 3964.5 ms ✓ Preferences 1084.1 ms ✓ Pidfile 1756.9 ms ✓ ExceptionUnwrapping 1348.8 ms ✓ FunctionalCollections 7536.5 ms ✓ Lazy 1750.0 ms ✓ Hiccup 2172.4 ms ✓ CodecZstd 1004.2 ms ✓ CodecZlib 2214.9 ms ✓ ArgParse 1347.3 ms ✓ Statistics → SparseArraysExt 9080.8 ms ✓ FixedPointNumbers 1012.8 ms ✓ AliasTables 1019.4 ms ✓ Missings 1063.4 ms ✓ PooledArrays 6674.2 ms ✓ OpenSSL 1592.4 ms ✓ FillArrays → FillArraysSparseArraysExt 1041.1 ms ✓ FillArrays → FillArraysStatisticsExt 1021.4 ms ✓ Parameters 1398.1 ms ✓ LogExpFunctions 812.3 ms ✓ TableTraits 1812.2 ms ✓ PDMats 919.7 ms ✓ Compat → CompatLinearAlgebraExt 929.2 ms ✓ PrecompileTools 1424.3 ms ✓ JLLWrappers 1312.7 ms ✓ MPIPreferences 1318.1 ms ✓ MatrixMarket 4063.6 ms ✓ ColorTypes 1810.8 ms ✓ Tables 1552.0 ms ✓ FillArrays → FillArraysPDMatsExt 3466.9 ms ✓ FilePathsBase 4847.7 ms ✓ DataStructures 7011.0 ms ✓ StringManipulation 52525.2 ms ✓ Parsers 1474.6 ms ✓ Kaleido_jll 1547.5 ms ✓ Hwloc_jll 1509.1 ms ✓ Rmath_jll 1247.7 ms ✓ MicrosoftMPI_jll 1504.3 ms ✓ OpenSpecFun_jll 1650.2 ms ✓ libaec_jll 1738.0 ms ✓ MbedTLS_jll 4488.5 ms ✓ MPItrampoline_jll 1027.5 ms ✓ ColorTypes → StyledStringsExt 15383.5 ms ✓ Colors 6581.1 ms ✓ ColorVectorSpace 1333.7 ms ✓ Mustache 3833.9 ms ✓ FilePathsBase → FilePathsBaseTestExt 1513.2 ms ✓ FilePathsBase → FilePathsBaseMmapExt 2341.5 ms ✓ SortingAlgorithms 3063.0 ms ✓ QuadGK 65732.2 ms ✓ PrettyTables 5190.4 ms ✓ JSON 1826.0 ms ✓ InlineStrings → ParsersExt 6139.2 ms ✓ MPICH_jll 5267.4 ms ✓ OpenMPI_jll 1793.8 ms ✓ Rmath 5811.7 ms ✓ SpecialFunctions 3398.3 ms ✓ MbedTLS 1922.2 ms ✓ Widgets 9563.0 ms ✓ ColorSchemes 5313.2 ms ✓ StatsBase 205450.9 ms ✓ DataFrames 1599.0 ms ✓ PlotlyKaleido 1456.9 ms ✓ AssetRegistry 2805.2 ms ✓ WeakRefStrings 7505.9 ms ✓ HDF5_jll 2566.1 ms ✓ HypergeometricFunctions 1491.0 ms ✓ ColorVectorSpace → SpecialFunctionsExt 60750.2 ms ✓ HTTP 12789.7 ms ✓ PlotlyBase 69521.6 ms ✓ CSV 23461.3 ms ✓ HDF5 4471.2 ms ✓ StatsFuns 4020.5 ms ✓ WebSockets 8132.4 ms ✓ Mux 14025.5 ms ✓ PlotlyBase → DataFramesExt 4724.4 ms ✓ StatsModels 10262.3 ms ✓ Distributions 9093.7 ms ✓ WebIO 4959.7 ms ✓ GLM 3596.2 ms ✓ Distributions → DistributionsTestExt 7650.9 ms ✓ PlotlyBase → DistributionsExt 6534.6 ms ✓ JSExpr 10787.1 ms ✓ Blink 18948.7 ms ✓ PlotlyJS 10205.6 ms ✓ PlotlyJS → CSVExt 17028.2 ms ✓ PlotlyJS → DataFramesExt 17955.4 ms ✓ OnlinePCA 121 dependencies successfully precompiled in 898 seconds. 39 already precompiled. 3 dependencies had output during precompilation: ┌ WebSockets │ WARNING: Imported binding Logging.termlength was undeclared at import time during import to WebSockets. │ WARNING: Imported binding Logging.showvalue was undeclared at import time during import to WebSockets. └ ┌ HTTP │ ┌ Info: Ignoring an error that occurred during the precompilation workload │ │ exception = │ │ HTTP.ConnectError for url = `https://localhost:57813`: IOError: connect: connection refused (ECONNREFUSED) │ │ Stacktrace: │ │ [1] getconnection(::Type{Sockets.TCPSocket}, host::SubString{String}, port::SubString{String}; keepalive::Bool, readtimeout::Int64, kw::@Kwargs{require_ssl_verification::Bool, iofunction::Nothing, decompress::Nothing, verbose::Int64}) │ │ @ HTTP.Connections ~/.julia/packages/HTTP/JcAHX/src/Connections.jl:531 │ │ [2] getconnection │ │ @ ~/.julia/packages/HTTP/JcAHX/src/Connections.jl:508 [inlined] │ │ [3] getconnection(::Type{OpenSSL.SSLStream}, host::SubString{String}, port::SubString{String}; kw::@Kwargs{require_ssl_verification::Bool, keepalive::Bool, readtimeout::Int64, iofunction::Nothing, decompress::Nothing, verbose::Int64}) │ │ @ HTTP.Connections ~/.julia/packages/HTTP/JcAHX/src/Connections.jl:585 │ │ [4] getconnection │ │ @ ~/.julia/packages/HTTP/JcAHX/src/Connections.jl:578 [inlined] │ │ [5] #13 │ │ @ ~/.julia/packages/HTTP/JcAHX/src/Connections.jl:467 [inlined] │ │ [6] macro expansion │ │ @ ~/.julia/packages/ConcurrentUtilities/ofY4K/src/try_with_timeout.jl:92 [inlined] │ │ [7] (::ConcurrentUtilities.var"#try_with_timeout##2#try_with_timeout##3"{Any, Channel{Any}, HTTP.Connections.var"#13#14"{OpenSSL.SSLStream, Bool, Bool, @Kwargs{readtimeout::Int64, iofunction::Nothing, decompress::Nothing, verbose::Int64}, SubString{String}, SubString{String}}, Timer})() │ │ @ ConcurrentUtilities ~/.julia/packages/ConcurrentUtilities/ofY4K/src/ConcurrentUtilities.jl:10 │ │ Stacktrace: │ │ [1] (::HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}})(req::HTTP.Messages.Request; proxy::Nothing, socket_type::Type, socket_type_tls::Nothing, readtimeout::Int64, connect_timeout::Int64, logerrors::Bool, logtag::Nothing, closeimmediately::Bool, kw::@Kwargs{iofunction::Nothing, decompress::Nothing, verbose::Int64}) │ │ @ HTTP.ConnectionRequest ~/.julia/packages/HTTP/JcAHX/src/clientlayers/ConnectionRequest.jl:88 │ │ [2] connections │ │ @ ~/.julia/packages/HTTP/JcAHX/src/clientlayers/ConnectionRequest.jl:60 [inlined] │ │ [3] (::Base.var"#46#47"{Base.var"#48#49"{ExponentialBackOff, HTTP.RetryRequest.var"#retrylayer##2#retrylayer##3"{Int64, typeof(HTTP.RetryRequest.FALSE), HTTP.Messages.Request, Base.RefValue{Int64}}, HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}})(args::HTTP.Messages.Request; kwargs::@Kwargs{iofunction::Nothing, decompress::Nothing, verbose::Int64}) │ │ @ Base ./error.jl:323 │ │ [4] kwcall(::@NamedTuple{iofunction::Nothing, decompress::Nothing, verbose::Int64}, ::Base.var"#46#47"{Base.var"#48#49"{ExponentialBackOff, HTTP.RetryRequest.var"#retrylayer##2#retrylayer##3"{Int64, typeof(HTTP.RetryRequest.FALSE), HTTP.Messages.Request, Base.RefValue{Int64}}, HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}, args::HTTP.Messages.Request) │ │ @ Base ./error.jl:306 │ │ [5] (::HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}})(req::HTTP.Messages.Request; retry::Bool, retries::Int64, retry_delays::ExponentialBackOff, retry_check::Function, retry_non_idempotent::Bool, kw::@Kwargs{iofunction::Nothing, decompress::Nothing, verbose::Int64}) │ │ @ HTTP.RetryRequest ~/.julia/packages/HTTP/JcAHX/src/clientlayers/RetryRequest.jl:75 │ │ [6] manageretries │ │ @ ~/.julia/packages/HTTP/JcAHX/src/clientlayers/RetryRequest.jl:30 [inlined] │ │ [7] (::HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}})(req::HTTP.Messages.Request; cookies::Bool, cookiejar::HTTP.Cookies.CookieJar, kw::@Kwargs{iofunction::Nothing, decompress::Nothing, verbose::Int64}) │ │ @ HTTP.CookieRequest ~/.julia/packages/HTTP/JcAHX/src/clientlayers/CookieRequest.jl:42 │ │ [8] managecookies │ │ @ ~/.julia/packages/HTTP/JcAHX/src/clientlayers/CookieRequest.jl:19 [inlined] │ │ [9] (::HTTP.HeadersRequest.var"#defaultheaders#headerslayer##0"{HTTP.HeadersRequest.var"#defaultheaders#1#headerslayer##1"{HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}}})(req::HTTP.Messages.Request; iofunction::Nothing, decompress::Nothing, basicauth::Bool, detect_content_type::Bool, canonicalize_headers::Bool, kw::@Kwargs{verbose::Int64}) │ │ @ HTTP.HeadersRequest ~/.julia/packages/HTTP/JcAHX/src/clientlayers/HeadersRequest.jl:71 │ │ [10] defaultheaders │ │ @ ~/.julia/packages/HTTP/JcAHX/src/clientlayers/HeadersRequest.jl:14 [inlined] │ │ [11] (::HTTP.RedirectRequest.var"#redirects#redirectlayer##0"{HTTP.RedirectRequest.var"#redirects#1#redirectlayer##1"{HTTP.HeadersRequest.var"#defaultheaders#headerslayer##0"{HTTP.HeadersRequest.var"#defaultheaders#1#headerslayer##1"{HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}}}}})(req::HTTP.Messages.Request; redirect::Bool, redirect_limit::Int64, redirect_method::Nothing, forwardheaders::Bool, response_stream::Nothing, kw::@Kwargs{verbose::Int64}) │ │ @ HTTP.RedirectRequest ~/.julia/packages/HTTP/JcAHX/src/clientlayers/RedirectRequest.jl:25 │ │ [12] redirects │ │ @ ~/.julia/packages/HTTP/JcAHX/src/clientlayers/RedirectRequest.jl:14 [inlined] │ │ [13] (::HTTP.MessageRequest.var"#makerequest#messagelayer##0"{HTTP.MessageRequest.var"#makerequest#1#messagelayer##1"{HTTP.RedirectRequest.var"#redirects#redirectlayer##0"{HTTP.RedirectRequest.var"#redirects#1#redirectlayer##1"{HTTP.HeadersRequest.var"#defaultheaders#headerslayer##0"{HTTP.HeadersRequest.var"#defaultheaders#1#headerslayer##1"{HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}}}}}}})(method::String, url::URIs.URI, headers::Nothing, body::Vector{UInt8}; copyheaders::Bool, response_stream::Nothing, http_version::HTTP.Strings.HTTPVersion, verbose::Int64, kw::@Kwargs{}) │ │ @ HTTP.MessageRequest ~/.julia/packages/HTTP/JcAHX/src/clientlayers/MessageRequest.jl:35 │ │ [14] makerequest │ │ @ ~/.julia/packages/HTTP/JcAHX/src/clientlayers/MessageRequest.jl:24 [inlined] │ │ [15] request(stack::HTTP.MessageRequest.var"#makerequest#messagelayer##0"{HTTP.MessageRequest.var"#makerequest#1#messagelayer##1"{HTTP.RedirectRequest.var"#redirects#redirectlayer##0"{HTTP.RedirectRequest.var"#redirects#1#redirectlayer##1"{HTTP.HeadersRequest.var"#defaultheaders#headerslayer##0"{HTTP.HeadersRequest.var"#defaultheaders#1#headerslayer##1"{HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}}}}}}}, method::String, url::String, h::Nothing, b::Vector{UInt8}, q::Nothing; headers::Nothing, body::Vector{UInt8}, query::Nothing, kw::@Kwargs{}) │ │ @ HTTP ~/.julia/packages/HTTP/JcAHX/src/HTTP.jl:457 │ │ [16] request(stack::Function, method::String, url::String, h::Nothing, b::Vector{UInt8}, q::Nothing) │ │ @ HTTP ~/.julia/packages/HTTP/JcAHX/src/HTTP.jl:455 │ │ [17] #request#21 │ │ @ ~/.julia/packages/HTTP/JcAHX/src/HTTP.jl:315 [inlined] │ │ ┌[18] request │ │ │ @ ~/.julia/packages/HTTP/JcAHX/src/HTTP.jl:313 [inlined] │ │ ╰──── repeated 2 times │ │ [20] get │ │ @ ~/.julia/packages/HTTP/JcAHX/src/HTTP.jl:518 [inlined] │ │ [21] #51 │ │ @ ~/.julia/packages/HTTP/JcAHX/src/precompile.jl:36 [inlined] │ │ [22] withenv(::HTTP.var"#51#52"{String}, ::Pair{String, Union{Nothing, String}}, ::Vararg{Pair{String, Union{Nothing, String}}}) │ │ @ Base ./env.jl:265 │ │ [23] macro expansion │ │ @ ~/.julia/packages/HTTP/JcAHX/src/precompile.jl:35 [inlined] │ │ [24] macro expansion │ │ @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] │ │ [25] macro expansion │ │ @ ~/.julia/packages/HTTP/JcAHX/src/precompile.jl:34 [inlined] │ │ [26] macro expansion │ │ @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] │ │ [27] top-level scope │ │ @ ~/.julia/packages/HTTP/JcAHX/src/precompile.jl:4 │ │ [28] include(mapexpr::Function, mod::Module, _path::String) │ │ @ Base ./Base.jl:312 │ │ [29] top-level scope │ │ @ ~/.julia/packages/HTTP/JcAHX/src/HTTP.jl:643 │ │ [30] include(mod::Module, _path::String) │ │ @ Base ./Base.jl:311 │ │ [31] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ │ @ Base ./loading.jl:3001 │ │ [32] top-level scope │ │ @ stdin:5 │ │ [33] eval(m::Module, e::Any) │ │ @ Core ./boot.jl:489 │ │ [34] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ │ @ Base ./loading.jl:2847 │ │ [35] include_string │ │ @ ./loading.jl:2857 [inlined] │ │ [36] exec_options(opts::Base.JLOptions) │ │ @ Base ./client.jl:318 │ │ [37] _start() │ └ @ Base ./client.jl:553 └ ┌ PlotlyBase → DistributionsExt │ WARNING: Constructor for type "Plot" was extended in `DistributionsExt` without explicit qualification or import. │ NOTE: Assumed "Plot" refers to `PlotlyBase.Plot`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Plot end`. │ Hint: To silence the warning, qualify `Plot` as `PlotlyBase.Plot` in the method signature or explicitly `import PlotlyBase: Plot`. └ Parsed args: binfile => /tmp/jl_BxjJI1/Data.zst csvfile => /tmp/jl_BxjJI1/Data.csv 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 ####### Binarization of MM (Julia API) ####### ####### Binarization of MM (Command line) ####### Parsed args: mmfile => /tmp/jl_BxjJI1/Data.mtx binfile => /tmp/jl_BxjJI1/Data.mtx.zst ####### Binarization of Binary COO (Julia API) ####### ####### Binarization of Binary COO (Command line) ####### Parsed args: bincoofile => /tmp/jl_BxjJI1/Data.bincoo binfile => /tmp/jl_BxjJI1/Data.bincoo.zst ####### Summarization (Julia API) ####### 1 / 2 : Column-wise statistics are calculated... 2 / 2 : Row-wise statistics are calculated... ####### Summarization (Command line) ####### Parsed args: binfile => /tmp/jl_BxjJI1/Data.zst outdir => /tmp/jl_fuzi2a pseudocount => 1.0 mode => dense 1 / 2 : Column-wise statistics are calculated... 2 / 2 : Row-wise statistics are calculated... ####### Summarization (Julia API) ####### 1 / 2 : Column-wise statistics are calculated... 2 / 2 : Row-wise statistics are calculated... ####### Summarization (Command line) ####### Parsed args: binfile => /tmp/jl_BxjJI1/Data.mtx.zst outdir => /tmp/jl_NBslBS pseudocount => 1.0 mode => sparse_mm 1 / 2 : Column-wise statistics are calculated... 2 / 2 : Row-wise statistics are calculated... ####### HVG (Julia API) ####### Highly Variable Genes are calculated... ####### HVG (Command line) ####### Parsed args: rowvarlist => /tmp/jl_fuzi2a/Feature_Vars.csv binfile => /tmp/jl_BxjJI1/Data.zst outdir => /tmp/jl_fuzi2a rowcv2list => /tmp/jl_fuzi2a/Feature_CV2s.csv rowmeanlist => /tmp/jl_fuzi2a/Feature_Means.csv Highly Variable Genes are calculated... ####### Filtering (Julia API) ####### ####### Filtering (Command line) ####### Parsed args: input => /tmp/jl_BxjJI1/Data.zst samplelist => /tmp/jl_fuzi2a/Sample_NoCounts.csv outdir => /tmp/jl_fuzi2a thr2 => 10 direct1 => + direct2 => + featurelist => /tmp/jl_fuzi2a/Feature_Means.csv thr1 => 10 Parsed args: input => /tmp/jl_BxjJI1/Data.zst samplelist => outdir => /tmp/jl_fuzi2a thr2 => 10 direct1 => + direct2 => + featurelist => /tmp/jl_fuzi2a/Feature_Means.csv thr1 => 10 Parsed args: input => /tmp/jl_BxjJI1/Data.zst samplelist => /tmp/jl_fuzi2a/Sample_NoCounts.csv outdir => /tmp/jl_fuzi2a thr2 => 10 direct1 => + direct2 => + featurelist => thr1 => 10 ####### GD (Julia API) ####### ####### GD (Command line) ####### Parsed args: scale => "ftt" logdir => "/tmp/jl_fuzi2a" initW => nothing scheduling => "robbins-monro" epsilon => 1.0f-8 stepsize => "1.0e-15" dim => "3" lower => 0 rowvarlist => "" offsetStoch => 1.0f-6 expvar => 0.1f0 input => "/tmp/jl_BxjJI1/Data.zst" perm => false pseudocount => 1.0f0 colsumlist => "" rowmeanlist => "/tmp/jl_fuzi2a/Feature_FTTMeans.csv" evalfreq => 5000 cper => 1.0f0 outdir => "/tmp/jl_fuzi2a" g => 0.9f0 upper => 1.0f38 numepoch => "1" offsetFull => 1.0f-20 initV => nothing Parsed args: scale => "ftt" logdir => "/tmp/jl_fuzi2a" initW => "/tmp/jl_fuzi2a/Eigen_vectors.csv" scheduling => "momentum" epsilon => 1.0f-8 stepsize => "1.0e-15" dim => "3" lower => 0 rowvarlist => "" offsetStoch => 1.0f-6 expvar => 0.1f0 input => "/tmp/jl_BxjJI1/Data.zst" perm => false pseudocount => 1.0f0 colsumlist => "" rowmeanlist => "/tmp/jl_fuzi2a/Feature_FTTMeans.csv" evalfreq => 5000 cper => 1.0f0 outdir => "/tmp/jl_fuzi2a" g => 0.9f0 upper => 1.0f38 numepoch => "1" offsetFull => 1.0f-20 initV => nothing Parsed args: scale => "ftt" logdir => "/tmp/jl_fuzi2a" initW => nothing scheduling => "nag" epsilon => 1.0f-8 stepsize => "1.0e-15" dim => "3" lower => 0 rowvarlist => "" offsetStoch => 1.0f-6 expvar => 0.1f0 input => "/tmp/jl_BxjJI1/Data.zst" perm => false pseudocount => 1.0f0 colsumlist => "" rowmeanlist => "/tmp/jl_fuzi2a/Feature_FTTMeans.csv" evalfreq => 5000 cper => 1.0f0 outdir => "/tmp/jl_fuzi2a" g => 0.9f0 upper => 1.0f38 numepoch => "1" offsetFull => 1.0f-20 initV => "/tmp/jl_fuzi2a/Loadings.csv" Parsed args: scale => "ftt" logdir => "/tmp/jl_fuzi2a" initW => nothing scheduling => "adagrad" epsilon => 1.0f-8 stepsize => "1.0e-15" dim => "3" lower => 0 rowvarlist => "" offsetStoch => 1.0f-6 expvar => 0.1f0 input => "/tmp/jl_BxjJI1/Data.zst" perm => false pseudocount => 1.0f0 colsumlist => "" rowmeanlist => "/tmp/jl_fuzi2a/Feature_FTTMeans.csv" evalfreq => 5000 cper => 1.0f0 outdir => "/tmp/jl_fuzi2a" g => 0.9f0 upper => 1.0f38 numepoch => "1" offsetFull => 1.0f-20 initV => nothing ####### Oja (Julia API) ####### Progress: 1%|▎ | ETA: 0:02:53 Progress: 1%|▍ | ETA: 0:03:19 Progress: 100%|█████████████████████████████████████████| Time: 0:00:02 Progress: 1%|▎ | ETA: 0:02:50 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 Progress: 1%|▎ | ETA: 0:02:54 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 Progress: 1%|▎ | ETA: 0:01:34 Progress: 100%|█████████████████████████████████████████| Time: 0:00:00 ####### Oja (Command line) ####### Parsed args: scale => "ftt" logdir => "/tmp/jl_fuzi2a" initW => nothing scheduling => "robbins-monro" epsilon => 1.0f-8 stepsize => "1.0e-15" dim => "3" lower => 0 rowvarlist => "" offsetStoch => 1.0f-6 expvar => 0.1f0 input => "/tmp/jl_BxjJI1/Data.zst" perm => false pseudocount => 1.0f0 colsumlist => "" rowmeanlist => "/tmp/jl_fuzi2a/Feature_FTTMeans.csv" evalfreq => 5000 cper => 1.0f0 outdir => "/tmp/jl_fuzi2a" g => 0.9f0 upper => 1.0f38 numepoch => "1" offsetFull => 1.0f-20 initV => nothing Progress: 1%|▎ | ETA: 0:06:43 Progress: 1%|▌ | ETA: 0:04:02 Progress: 100%|█████████████████████████████████████████| Time: 0:00:03 Parsed args: scale => "ftt" logdir => "/tmp/jl_fuzi2a" initW => nothing scheduling => "momentum" epsilon => 1.0f-8 stepsize => "1.0e-15" dim => "3" lower => 0 rowvarlist => "" offsetStoch => 1.0f-6 expvar => 0.1f0 input => "/tmp/jl_BxjJI1/Data.zst" perm => false pseudocount => 1.0f0 colsumlist => "" rowmeanlist => "/tmp/jl_fuzi2a/Feature_FTTMeans.csv" evalfreq => 5000 cper => 1.0f0 outdir => "/tmp/jl_fuzi2a" g => 0.9f0 upper => 1.0f38 numepoch => "1" offsetFull => 1.0f-20 initV => nothing Progress: 1%|▎ | ETA: 0:06:50 Progress: 100%|█████████████████████████████████████████| Time: 0:00:03 Parsed args: scale => "ftt" logdir => "/tmp/jl_fuzi2a" initW => nothing scheduling => "nag" epsilon => 1.0f-8 stepsize => "1.0e-15" dim => "3" lower => 0 rowvarlist => "" offsetStoch => 1.0f-6 expvar => 0.1f0 input => "/tmp/jl_BxjJI1/Data.zst" perm => false pseudocount => 1.0f0 colsumlist => "" rowmeanlist => "/tmp/jl_fuzi2a/Feature_FTTMeans.csv" evalfreq => 5000 cper => 1.0f0 outdir => "/tmp/jl_fuzi2a" g => 0.9f0 upper => 1.0f38 numepoch => "1" offsetFull => 1.0f-20 initV => nothing Progress: 1%|▎ | ETA: 0:08:54 Progress: 100%|█████████████████████████████████████████| Time: 0:00:03 Parsed args: scale => "ftt" logdir => "/tmp/jl_fuzi2a" initW => nothing scheduling => "adagrad" epsilon => 1.0f-8 stepsize => "1.0e-15" dim => "3" lower => 0 rowvarlist => "" offsetStoch => 1.0f-6 expvar => 0.1f0 input => "/tmp/jl_BxjJI1/Data.zst" perm => false pseudocount => 1.0f0 colsumlist => "" rowmeanlist => "/tmp/jl_fuzi2a/Feature_FTTMeans.csv" evalfreq => 5000 cper => 1.0f0 outdir => "/tmp/jl_fuzi2a" g => 0.9f0 upper => 1.0f38 numepoch => "1" offsetFull => 1.0f-20 initV => nothing Progress: 1%|▎ | ETA: 0:08:44 Progress: 100%|█████████████████████████████████████████| Time: 0:00:03 ####### SGD (Julia API) ####### Progress: 1%|▎ | ETA: 0:03:05 Progress: 1%|▍ | ETA: 0:03:57 Progress: 100%|█████████████████████████████████████████| Time: 0:00:02 Progress: 1%|▎ | ETA: 0:04:17 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 Progress: 1%|▎ | ETA: 0:04:38 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 Progress: 1%|▎ | ETA: 0:03:18 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 ####### SGD (Command line) ####### Parsed args: scale => "ftt" logdir => "/tmp/jl_fuzi2a" initW => nothing scheduling => "robbins-monro" epsilon => 1.0f-8 stepsize => "1.0e-15" dim => "3" lower => 0 rowvarlist => "" offsetStoch => 1.0f-6 expvar => 0.1f0 input => "/tmp/jl_BxjJI1/Data.zst" perm => false pseudocount => 1.0f0 colsumlist => "" numbatch => 100 rowmeanlist => "/tmp/jl_fuzi2a/Feature_FTTMeans.csv" evalfreq => 5000 cper => 1.0f0 outdir => "/tmp/jl_fuzi2a" g => 0.9f0 upper => 1.0f38 numepoch => "1" offsetFull => 1.0f-20 initV => nothing Progress: 1%|▎ | ETA: 0:07:09 Progress: 1%|▍ | ETA: 0:05:56 Progress: 100%|█████████████████████████████████████████| Time: 0:00:03 Parsed args: scale => "ftt" logdir => "/tmp/jl_fuzi2a" initW => nothing scheduling => "momentum" epsilon => 1.0f-8 stepsize => "1.0e-15" dim => "3" lower => 0 rowvarlist => "" offsetStoch => 1.0f-6 expvar => 0.1f0 input => "/tmp/jl_BxjJI1/Data.zst" perm => false pseudocount => 1.0f0 colsumlist => "" numbatch => 100 rowmeanlist => "/tmp/jl_fuzi2a/Feature_FTTMeans.csv" evalfreq => 5000 cper => 1.0f0 outdir => "/tmp/jl_fuzi2a" g => 0.9f0 upper => 1.0f38 numepoch => "1" offsetFull => 1.0f-20 initV => nothing Progress: 1%|▎ | ETA: 0:07:48 Progress: 100%|█████████████████████████████████████████| Time: 0:00:03 Parsed args: scale => "ftt" logdir => "/tmp/jl_fuzi2a" initW => nothing scheduling => "nag" epsilon => 1.0f-8 stepsize => "1.0e-15" dim => "3" lower => 0 rowvarlist => "" offsetStoch => 1.0f-6 expvar => 0.1f0 input => "/tmp/jl_BxjJI1/Data.zst" perm => false pseudocount => 1.0f0 colsumlist => "" numbatch => 100 rowmeanlist => "/tmp/jl_fuzi2a/Feature_FTTMeans.csv" evalfreq => 5000 cper => 1.0f0 outdir => "/tmp/jl_fuzi2a" g => 0.9f0 upper => 1.0f38 numepoch => "1" offsetFull => 1.0f-20 initV => nothing Progress: 1%|▎ | ETA: 0:09:36 Progress: 100%|█████████████████████████████████████████| Time: 0:00:04 Parsed args: scale => "ftt" logdir => "/tmp/jl_fuzi2a" initW => nothing scheduling => "adagrad" epsilon => 1.0f-8 stepsize => "1.0e-15" dim => "3" lower => 0 rowvarlist => "" offsetStoch => 1.0f-6 expvar => 0.1f0 input => "/tmp/jl_BxjJI1/Data.zst" perm => false pseudocount => 1.0f0 colsumlist => "" numbatch => 100 rowmeanlist => "/tmp/jl_fuzi2a/Feature_FTTMeans.csv" evalfreq => 5000 cper => 1.0f0 outdir => "/tmp/jl_fuzi2a" g => 0.9f0 upper => 1.0f38 numepoch => "1" offsetFull => 1.0f-20 initV => nothing Progress: 1%|▎ | ETA: 0:08:29 Progress: 100%|█████████████████████████████████████████| Time: 0:00:03 ####### CCIPCA (Julia API) ####### Progress: 1%|▎ | ETA: 0:01:58 Progress: 1%|▍ | ETA: 0:02:29 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 ####### CCIPCA (Command line) ####### Parsed args: scale => "ftt" logdir => "/tmp/jl_fuzi2a" initW => nothing lower => 0 stepsize => "1.0e-15" dim => "3" rowvarlist => "" offsetStoch => 1.0f-15 expvar => 0.1f0 input => "/tmp/jl_BxjJI1/Data.zst" perm => false pseudocount => 1.0f0 colsumlist => "" rowmeanlist => "/tmp/jl_fuzi2a/Feature_FTTMeans.csv" evalfreq => 5000 cper => 1.0f0 outdir => "/tmp/jl_fuzi2a" upper => 1.0f38 numepoch => "1" initV => nothing Progress: 1%|▎ | ETA: 0:09:01 Progress: 1%|▍ | ETA: 0:07:24 Progress: 100%|█████████████████████████████████████████| Time: 0:00:04 ####### RSGD (Julia API) ####### Progress: 1%|▎ | ETA: 0:16:30 Progress: 1%|▍ | ETA: 0:12:51 Progress: 100%|█████████████████████████████████████████| Time: 0:00:07 Progress: 1%|▎ | ETA: 0:04:17 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 Progress: 1%|▎ | ETA: 0:05:28 Progress: 100%|█████████████████████████████████████████| Time: 0:00:02 Progress: 1%|▎ | ETA: 0:03:01 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 ####### RSGD (Command line) ####### Parsed args: scale => "ftt" logdir => "/tmp/jl_fuzi2a" initW => nothing scheduling => "robbins-monro" epsilon => 1.0f-8 stepsize => "1.0e-15" dim => "3" lower => 0 rowvarlist => "" offsetStoch => 1.0f-6 expvar => 0.1f0 input => "/tmp/jl_BxjJI1/Data.zst" perm => false pseudocount => 1.0f0 colsumlist => "" numbatch => 100 rowmeanlist => "/tmp/jl_fuzi2a/Feature_FTTMeans.csv" evalfreq => 5000 cper => 1.0f0 outdir => "/tmp/jl_fuzi2a" g => 0.9f0 upper => 1.0f38 numepoch => "1" offsetFull => 1.0f-20 initV => nothing Progress: 1%|▎ | ETA: 0:14:29 Progress: 1%|▍ | ETA: 0:10:44 Progress: 100%|█████████████████████████████████████████| Time: 0:00:06 Parsed args: scale => "ftt" logdir => "/tmp/jl_fuzi2a" initW => nothing scheduling => "momentum" epsilon => 1.0f-8 stepsize => "1.0e-15" dim => "3" lower => 0 rowvarlist => "" offsetStoch => 1.0f-6 expvar => 0.1f0 input => "/tmp/jl_BxjJI1/Data.zst" perm => false pseudocount => 1.0f0 colsumlist => "" numbatch => 100 rowmeanlist => "/tmp/jl_fuzi2a/Feature_FTTMeans.csv" evalfreq => 5000 cper => 1.0f0 outdir => "/tmp/jl_fuzi2a" g => 0.9f0 upper => 1.0f38 numepoch => "1" offsetFull => 1.0f-20 initV => nothing Progress: 1%|▎ | ETA: 0:14:47 Progress: 100%|█████████████████████████████████████████| Time: 0:00:06 Parsed args: scale => "ftt" logdir => "/tmp/jl_fuzi2a" initW => nothing scheduling => "nag" epsilon => 1.0f-8 stepsize => "1.0e-15" dim => "3" lower => 0 rowvarlist => "" offsetStoch => 1.0f-6 expvar => 0.1f0 input => "/tmp/jl_BxjJI1/Data.zst" perm => false pseudocount => 1.0f0 colsumlist => "" numbatch => 100 rowmeanlist => "/tmp/jl_fuzi2a/Feature_FTTMeans.csv" evalfreq => 5000 cper => 1.0f0 outdir => "/tmp/jl_fuzi2a" g => 0.9f0 upper => 1.0f38 numepoch => "1" offsetFull => 1.0f-20 initV => nothing Progress: 1%|▎ | ETA: 0:15:21 Progress: 100%|█████████████████████████████████████████| Time: 0:00:06 Parsed args: scale => "ftt" logdir => "/tmp/jl_fuzi2a" initW => nothing scheduling => "adagrad" epsilon => 1.0f-8 stepsize => "1.0e-15" dim => "3" lower => 0 rowvarlist => "" offsetStoch => 1.0f-6 expvar => 0.1f0 input => "/tmp/jl_BxjJI1/Data.zst" perm => false pseudocount => 1.0f0 colsumlist => "" numbatch => 100 rowmeanlist => "/tmp/jl_fuzi2a/Feature_FTTMeans.csv" evalfreq => 5000 cper => 1.0f0 outdir => "/tmp/jl_fuzi2a" g => 0.9f0 upper => 1.0f38 numepoch => "1" offsetFull => 1.0f-20 initV => nothing Progress: 1%|▎ | ETA: 0:16:11 Progress: 100%|█████████████████████████████████████████| Time: 0:00:06 ####### SVRG (Julia API) ####### Progress: 1%|▎ | ETA: 0:04:30 Progress: 1%|▍ | ETA: 0:05:27 Progress: 100%|█████████████████████████████████████████| Time: 0:00:03 Progress: 1%|▎ | ETA: 0:06:25 Progress: 100%|█████████████████████████████████████████| Time: 0:00:02 Progress: 1%|▎ | ETA: 0:09:31 Progress: 100%|█████████████████████████████████████████| Time: 0:00:03 Progress: 1%|▎ | ETA: 0:07:00 Progress: 100%|█████████████████████████████████████████| Time: 0:00:02 ####### SVRG (Command line) ####### Parsed args: scale => "ftt" logdir => "/tmp/jl_fuzi2a" initW => nothing scheduling => "robbins-monro" epsilon => 1.0f-8 stepsize => "1.0e-15" dim => "3" lower => 0 rowvarlist => "" offsetStoch => 1.0f-6 expvar => 0.1f0 input => "/tmp/jl_BxjJI1/Data.zst" perm => false pseudocount => 1.0f0 colsumlist => "" numbatch => 100 rowmeanlist => "/tmp/jl_fuzi2a/Feature_FTTMeans.csv" evalfreq => 5000 cper => 1.0f0 outdir => "/tmp/jl_fuzi2a" g => 0.9f0 upper => 1.0f38 numepoch => "1" offsetFull => 1.0f-20 initV => nothing Progress: 1%|▎ | ETA: 0:16:14 Progress: 1%|▍ | ETA: 0:12:56 Progress: 100%|█████████████████████████████████████████| Time: 0:00:07 Parsed args: scale => "ftt" logdir => "/tmp/jl_fuzi2a" initW => nothing scheduling => "momentum" epsilon => 1.0f-8 stepsize => "1.0e-15" dim => "3" lower => 0 rowvarlist => "" offsetStoch => 1.0f-6 expvar => 0.1f0 input => "/tmp/jl_BxjJI1/Data.zst" perm => false pseudocount => 1.0f0 colsumlist => "" numbatch => 100 rowmeanlist => "/tmp/jl_fuzi2a/Feature_FTTMeans.csv" evalfreq => 5000 cper => 1.0f0 outdir => "/tmp/jl_fuzi2a" g => 0.9f0 upper => 1.0f38 numepoch => "1" offsetFull => 1.0f-20 initV => nothing Progress: 1%|▎ | ETA: 0:16:01 Progress: 100%|█████████████████████████████████████████| Time: 0:00:06 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1779 running 1 of 1 signal (10): User defined signal 1 jl_lookup_generic_ at /source/src/gf.c:4162 [inlined] ijl_apply_generic at /source/src/gf.c:4208 jl_apply at /source/src/julia.h:2375 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_fptr_interpret_call at /source/src/interpreter.c:817 _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_fptr_interpret_call at /source/src/interpreter.c:817 _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_fptr_interpret_call at /source/src/interpreter.c:817 _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_invoke at /source/src/gf.c:4022 macro expansion at /home/pkgeval/.julia/packages/ArgParse/mpp98/src/settings.jl:826 [inlined] parse_commandline at /home/pkgeval/.julia/packages/OnlinePCA/AhPWT/src/Utils.jl:702 main at /home/pkgeval/.julia/packages/OnlinePCA/AhPWT/bin/svrg:8 unknown function (ip: 0x7f6d5db191df) at (unknown file) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2847 _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 _include at ./loading.jl:2907 include at ./Base.jl:311 exec_options at ./client.jl:320 _start at ./client.jl:553 jfptr__start_70166.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7f6d5eea4249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 812 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007f6d44c00010 Total snapshots: 195. Utilization: 100% ╎164 @Base/client.jl:553 _start() ╎ 164 @Base/client.jl:320 exec_options(opts::Base.JLOptions) ╎ 164 @Base/Base.jl:311 include(mod::Module, _path::String) ╎ 164 @Base/loading.jl:2907 _include(mapexpr::Function, mod::Module, _path… ╎ 164 @Base/loading.jl:2847 include_string(mapexpr::typeof(identity), mod… ╎ 164 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ 164 @OnlinePCA/bin/svrg:8 main() ╎ ╎ 136 @OnlinePCA/…/Utils.jl:702 parse_commandline(pca::OnlinePCA.SVRG) 63╎ ╎ 135 @ArgParse/…ttings.jl:826 macro expansion ╎ ╎ 16 @Compiler/…einfer.jl:1570 typeinf_ext_toplevel(mi::Core.Method… ╎ ╎ 14 @Compiler/…infer.jl:1561 typeinf_ext_toplevel ╎ ╎ ╎ 14 @Compiler/…infer.jl:1378 typeinf_ext(interp::Compiler.Native… ╎ ╎ ╎ 10 @Compiler/…tion.jl:4521 typeinf(interp::Compiler.NativeInte… ╎ ╎ ╎ 10 @Compiler/…tion.jl:4363 typeinf_local(interp::Compiler.Nat… ╎ ╎ ╎ 10 @Compiler/…tion.jl:3814 abstract_eval_basic_statement ╎ ╎ ╎ 10 @Compiler/…ion.jl:3857 abstract_eval_basic_statement ╎ ╎ ╎ ╎ 10 @Compiler/…ion.jl:3430 abstract_eval_statement_expr(int… ╎ ╎ ╎ ╎ 10 @Compiler/…on.jl:3074 abstract_eval_call ╎ ╎ ╎ ╎ 10 @Compiler/…on.jl:3056 abstract_call(interp::Compiler.… ╎ ╎ ╎ ╎ 10 @Compiler/…on.jl:2896 abstract_call ╎ ╎ ╎ ╎ 10 @Compiler/…n.jl:2903 abstract_call(interp::Compiler… ╎ ╎ ╎ ╎ ╎ 3 @Compiler/…n.jl:2683 abstract_call_known(interp::C… ╎ ╎ ╎ ╎ ╎ 3 @Compiler/….jl:1983 abstract_call_builtin(interp:… 1╎ ╎ ╎ ╎ ╎ 3 @Compiler/….jl:2852 builtin_tfunction(interp::Co… ╎ ╎ ╎ ╎ ╎ 2 @Compiler/….jl:1083 getfield_tfunc(𝕃::Compiler.… ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…jl:1117 _getfield_tfunc ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…jl:1124 _getfield_tfunc ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:1147 _getfield_tfunc(𝕃::Compile… ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:1169 _getfield_tfunc(𝕃::Compil… 1╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:1201 _getfield_tfunc(𝕃::Compi… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:1250 _getfield_tfunc(𝕃::Compi… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:308 tmerge ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:0 tmerge(lattice::Compiler.… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:536 tmerge(lattice::Compil… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:721 tmerge(lattice::Compi… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:733 tmerge ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:749 tmerge(lattice::Com… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:783 tmerge_types_slow(… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…ls.jl:1574 _uniontypes(x::A… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…ls.jl:1577 _uniontypes(x::… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…ay.jl:1320 push! ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…ay.jl:1181 _growend! 1╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +1 1 @Base/…ay.jl:1165 _growend_inte… ╎ ╎ ╎ ╎ ╎ 7 @Compiler/…n.jl:2796 abstract_call_known(interp::C… ╎ ╎ ╎ ╎ ╎ 4 @Compiler/…n.jl:120 abstract_call_gf_by_type(inte… ╎ ╎ ╎ ╎ ╎ 4 @Compiler/….jl:342 find_method_matches ╎ ╎ ╎ ╎ ╎ 4 @Compiler/….jl:348 #find_method_matches#134 ╎ ╎ ╎ ╎ ╎ 4 @Compiler/….jl:386 find_simple_method_matches(… ╎ ╎ ╎ ╎ ╎ ╎ 4 @Compiler/…jl:102 findall ╎ ╎ ╎ ╎ ╎ ╎ 3 @Compiler/…jl:105 findall(sig::Type, table::… ╎ ╎ ╎ ╎ ╎ ╎ 3 @Compiler/…jl:70 findall ╎ ╎ ╎ ╎ ╎ ╎ 3 @Compiler/…l:70 #findall#5 ╎ ╎ ╎ ╎ ╎ ╎ 3 @Compiler/…l:97 _findall 3╎ ╎ ╎ ╎ ╎ ╎ ╎ 3 @Base/…ls.jl:1595 _methods_by_ftype ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…jl:111 findall(sig::Type, table::… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…jl:70 findall ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:70 #findall#5 ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:97 _findall 1╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…ls.jl:1595 _methods_by_ftype ╎ ╎ ╎ ╎ ╎ 3 @Compiler/…n.jl:338 abstract_call_gf_by_type(inte… ╎ ╎ ╎ ╎ ╎ 1 @Compiler/….jl:167 (::Compiler.var"#infercalls#a… ╎ ╎ ╎ ╎ ╎ 1 @Compiler/….jl:735 abstract_call_method(interp:… ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…jl:1029 typeinf_edge(interp::Compil… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…als.jl:1769 specialize_method 1╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…ls.jl:1782 #specialize_method#8 ╎ ╎ ╎ ╎ ╎ 2 @Compiler/….jl:252 (::Compiler.var"#infercalls#a… ╎ ╎ ╎ ╎ ╎ 2 @Compiler/….jl:178 (::Compiler.var"#handle1#abs… ╎ ╎ ╎ ╎ ╎ 2 @Compiler/….jl:868 abstract_call_method_with_c… ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…jl:898 abstract_call_method_with_c… ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:1348 const_prop_call(interp::Co… ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:4521 typeinf(interp::Compiler.… ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:4363 typeinf_local(interp::Co… ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:3814 abstract_eval_basic_sta… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:3857 abstract_eval_basic_st… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:3430 abstract_eval_stateme… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:3074 abstract_eval_call ╎ ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:3056 abstract_call(inter… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:2896 abstract_call ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:2903 abstract_call(int… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:2796 abstract_call_kn… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:338 abstract_call_gf… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:252 (::Compiler.var… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:178 (::Compiler.va… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +1 2 @Compiler/…l:868 abstract_call_… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +2 2 @Compiler/…l:898 abstract_call_… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +3 2 @Compiler/…l:1348 const_prop_ca… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +4 1 @Compiler/…l:4521 typeinf(inter… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +5 1 @Compiler/…l:4363 typeinf_local… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +6 1 @Compiler/…l:3814 abstract_eval… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +7 1 @Compiler/…l:3857 abstract_eval… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +8 1 @Compiler/…l:3430 abstract_eval… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +9 1 @Compiler/…l:3074 abstract_eval… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +10 1 @Compiler/…l:3056 abstract_call… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +11 1 @Compiler/…l:2896 abstract_call ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +12 1 @Compiler/…l:2903 abstract_call… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +13 1 @Compiler/…l:2796 abstract_call… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +14 1 @Compiler/…l:338 abstract_call_… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +15 1 @Compiler/…l:252 (::Compiler.va… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +16 1 @Compiler/…l:178 (::Compiler.va… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +17 1 @Compiler/…l:868 abstract_call_… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +18 1 @Compiler/…l:892 abstract_call_… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +19 1 @Compiler/…l:1265 semi_concrete… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +20 1 @Compiler/…l:318 ir_abstract_co… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +21 1 @Compiler/…l:332 ir_abstract_co… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +22 1 @Compiler/…l:286 scan!(callback… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +23 1 @Compiler/…l:364 (::Compiler.va… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +24 1 @Compiler/…l:154 reprocess_inst… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +25 1 @Compiler/…l:3430 abstract_eval… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +26 1 @Compiler/…l:3074 abstract_eval… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +27 1 @Compiler/…l:58 abstract_call ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +28 1 @Compiler/…l:2896 abstract_call ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +29 1 @Compiler/…l:2903 abstract_call… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +30 1 @Compiler/…l:2683 abstract_call… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +31 1 @Compiler/…l:1983 abstract_call… 1╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +32 1 @Compiler/…l:2852 builtin_tfunc… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +4 1 @Compiler/…l:4528 typeinf(inter… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +5 1 @Compiler/…l:232 finish_nocycle… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +6 1 @Compiler/…l:1021 optimize(inte… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +7 1 @Compiler/…l:1048 run_passes_ip… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +8 1 @Compiler/…l:1035 run_passes_ip… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +9 1 @Compiler/…l:79 ssa_inlining_pa… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +10 1 @Compiler/…l:663 batch_inline!(… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +11 1 @Compiler/…l:398 ir_inline_item… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +12 1 @Compiler/…l:1154 setindex!(com… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +13 1 @Compiler/…l:1125 setindex! ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +14 1 @Compiler/…l:948 count_added_no… 1╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +15 1 @Compiler/…l:934 _count_added_n… ╎ ╎ ╎ 4 @Compiler/…tion.jl:4528 typeinf(interp::Compiler.NativeInte… ╎ ╎ ╎ 4 @Compiler/…nfer.jl:232 finish_nocycle(::Compiler.NativeInt… ╎ ╎ ╎ 3 @Compiler/…mize.jl:1021 optimize(interp::Compiler.NativeI… ╎ ╎ ╎ 3 @Compiler/…ize.jl:1048 run_passes_ipo_safe ╎ ╎ ╎ ╎ 3 @Compiler/…ize.jl:1035 run_passes_ipo_safe(ci::Core.Cod… 1╎ ╎ ╎ ╎ 1 @Compiler/…ze.jl:1331 slot2reg ╎ ╎ ╎ ╎ 1 @Compiler/…ng.jl:76 ssa_inlining_pass! ╎ ╎ ╎ ╎ 1 @Compiler/…ng.jl:1664 assemble_inline_todo!(ir::Compi… ╎ ╎ ╎ ╎ 1 @Compiler/…ng.jl:1413 handle_call! ╎ ╎ ╎ ╎ 1 @Compiler/…g.jl:1381 compute_inlining_cases(info::C… ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…g.jl:1309 handle_any_const_result! ╎ ╎ ╎ ╎ ╎ 1 @Compiler/….jl:1321 handle_any_const_result!(case… ╎ ╎ ╎ ╎ ╎ 1 @Compiler/….jl:1421 handle_match! ╎ ╎ ╎ ╎ ╎ 1 @Compiler/….jl:1429 handle_match!(cases::Vector… ╎ ╎ ╎ ╎ ╎ 1 @Compiler/….jl:921 analyze_method! ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…jl:954 analyze_method!(match::Core… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…jl:873 resolve_todo(mi::Core.Meth… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:958 retrieve_ir_for_inlining 1╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…ls.jl:1609 _uncompressed_ir(codeins… ╎ ╎ ╎ ╎ 1 @Compiler/…ir.jl:2146 compact! ╎ ╎ ╎ ╎ 1 @Compiler/…ir.jl:2146 compact!(code::Compiler.IRCode,… ╎ ╎ ╎ ╎ 1 @Compiler/…ir.jl:807 IncrementalCompact ╎ ╎ ╎ ╎ 1 @Compiler/…ir.jl:779 Compiler.IncrementalCompact(co… 1╎ ╎ ╎ ╎ ╎ 1 @Base/…tials.jl:973 setindex! ╎ ╎ ╎ 1 @Compiler/…mize.jl:1023 optimize(interp::Compiler.NativeI… ╎ ╎ ╎ 1 @Compiler/…mize.jl:547 finishopt! 1╎ ╎ ╎ ╎ 1 @Compiler/…ize.jl:194 OptimizationResult ╎ ╎ 2 @Compiler/…infer.jl:1562 typeinf_ext_toplevel 2╎ ╎ ╎ 2 @Compiler/…infer.jl:1555 add_codeinsts_to_jit!(interp::Compi… ╎ ╎ 56 @Base/dict.jl:115 Dict ╎ ╎ 56 @Base/dict.jl:117 Dict ╎ ╎ ╎ 56 @Base/…tractdict.jl:643 dict_with_eltype(DT_apply::Base.var"… 55╎ ╎ ╎ 56 @Base/…tractdict.jl:610 grow_to! 1╎ ╎ 1 @ArgParse/…ttings.jl:863 macro expansion 10╎ ╎ 28 @OnlinePCA/…/Utils.jl:809 parse_commandline(pca::OnlinePCA.SVRG) ╎ ╎ 18 @Compiler/…einfer.jl:1570 typeinf_ext_toplevel(mi::Core.MethodI… ╎ ╎ 17 @Compiler/…einfer.jl:1561 typeinf_ext_toplevel 1╎ ╎ 17 @Compiler/…infer.jl:1378 typeinf_ext(interp::Compiler.NativeI… 1╎ ╎ ╎ 1 @Compiler/…ation.jl:4512 typeinf(interp::Compiler.NativeInte… ╎ ╎ ╎ 8 @Compiler/…ation.jl:4521 typeinf(interp::Compiler.NativeInte… ╎ ╎ ╎ 8 @Compiler/…tion.jl:4363 typeinf_local(interp::Compiler.Nati… ╎ ╎ ╎ 8 @Compiler/…tion.jl:3814 abstract_eval_basic_statement ╎ ╎ ╎ 8 @Compiler/…tion.jl:3857 abstract_eval_basic_statement ╎ ╎ ╎ 8 @Compiler/…ion.jl:3430 abstract_eval_statement_expr(inte… ╎ ╎ ╎ ╎ 8 @Compiler/…ion.jl:3074 abstract_eval_call ╎ ╎ ╎ ╎ 8 @Compiler/…on.jl:3056 abstract_call(interp::Compiler.N… ╎ ╎ ╎ ╎ 8 @Compiler/…on.jl:2896 abstract_call ╎ ╎ ╎ ╎ 1 @Compiler/…on.jl:2900 abstract_call(interp::Compiler… 1╎ ╎ ╎ ╎ 1 @Compiler/…n.jl:2876 abstract_call_unknown(interp::… ╎ ╎ ╎ ╎ 7 @Compiler/…on.jl:2903 abstract_call(interp::Compiler… ╎ ╎ ╎ ╎ 7 @Compiler/…n.jl:2796 abstract_call_known(interp::Co… ╎ ╎ ╎ ╎ ╎ 3 @Compiler/…n.jl:120 abstract_call_gf_by_type(inter… ╎ ╎ ╎ ╎ ╎ 3 @Compiler/…n.jl:342 find_method_matches ╎ ╎ ╎ ╎ ╎ 3 @Compiler/….jl:348 #find_method_matches#134 ╎ ╎ ╎ ╎ ╎ 3 @Compiler/….jl:386 find_simple_method_matches(i… ╎ ╎ ╎ ╎ ╎ 3 @Compiler/….jl:102 findall ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…jl:105 findall(sig::Type, table::C… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…jl:70 findall ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…jl:70 #findall#5 ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:97 _findall 1╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…ls.jl:1595 _methods_by_ftype ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…jl:111 findall(sig::Type, table::C… ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…jl:70 findall ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…jl:70 #findall#5 ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:97 _findall 2╎ ╎ ╎ ╎ ╎ ╎ 2 @Base/…ls.jl:1595 _methods_by_ftype ╎ ╎ ╎ ╎ ╎ 4 @Compiler/…n.jl:338 abstract_call_gf_by_type(inter… ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…n.jl:167 (::Compiler.var"#infercalls#a… ╎ ╎ ╎ ╎ ╎ 1 @Compiler/….jl:735 abstract_call_method(interp::… ╎ ╎ ╎ ╎ ╎ 1 @Compiler/….jl:1087 typeinf_edge(interp::Compil… ╎ ╎ ╎ ╎ ╎ 1 @Compiler/….jl:605 InferenceState ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…jl:364 Compiler.InferenceState(res… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…ray.jl:360 copy 1╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…ot.jl:588 GenericMemory ╎ ╎ ╎ ╎ ╎ 3 @Compiler/…n.jl:252 (::Compiler.var"#infercalls#a… ╎ ╎ ╎ ╎ ╎ 3 @Compiler/….jl:178 (::Compiler.var"#handle1#abst… ╎ ╎ ╎ ╎ ╎ 3 @Compiler/….jl:868 abstract_call_method_with_co… ╎ ╎ ╎ ╎ ╎ 3 @Compiler/….jl:898 abstract_call_method_with_c… ╎ ╎ ╎ ╎ ╎ ╎ 3 @Compiler/…jl:1348 const_prop_call(interp::Co… ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:4521 typeinf(interp::Compiler.N… ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:4363 typeinf_local(interp::Com… ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:3814 abstract_eval_basic_stat… ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:3857 abstract_eval_basic_sta… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:3430 abstract_eval_statemen… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:3074 abstract_eval_call ╎ ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:3056 abstract_call(interp… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:2896 abstract_call ╎ ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:2903 abstract_call(inte… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:2796 abstract_call_kno… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:338 abstract_call_gf_… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:252 (::Compiler.var"… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:178 (::Compiler.var… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:868 abstract_call_… 1╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +1 1 @Compiler/…l:874 abstract_call_… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +1 1 @Compiler/…l:898 abstract_call_… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +2 1 @Compiler/…l:1348 const_prop_ca… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +3 1 @Compiler/…l:4521 typeinf(inter… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +4 1 @Compiler/…l:4363 typeinf_local… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +5 1 @Compiler/…l:3814 abstract_eval… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +6 1 @Compiler/…l:3857 abstract_eval… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +7 1 @Compiler/…l:3430 abstract_eval… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +8 1 @Compiler/…l:3074 abstract_eval… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +9 1 @Compiler/…l:3056 abstract_call… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +10 1 @Compiler/…l:2896 abstract_call ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +11 1 @Compiler/…l:2903 abstract_call… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +12 1 @Compiler/…l:2796 abstract_call… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +13 1 @Compiler/…l:338 abstract_call_… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +14 1 @Compiler/…l:252 (::Compiler.va… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +15 1 @Compiler/…l:178 (::Compiler.va… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +16 1 @Compiler/…l:868 abstract_call_… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +17 1 @Compiler/…l:898 abstract_call_… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +18 1 @Compiler/…l:1348 const_prop_ca… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +19 1 @Compiler/…l:4528 typeinf(inter… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +20 1 @Compiler/…l:232 finish_nocycle… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +21 1 @Compiler/…l:1022 optimize(inte… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +22 1 @Compiler/…l:998 ipo_dataflow_a… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +23 1 @Compiler/…l:286 scan!(callback… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +24 1 @Compiler/…l:906 (::Compiler.Sc… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +25 1 @Compiler/…l:590 visit_conditio… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +26 1 @Base/…ay.jl:1310 push! ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +27 1 @Base/…ay.jl:1313 _push! ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +28 1 @Base/…ay.jl:1181 _growend! ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +29 1 @Base/…ay.jl:1156 _growend_inte… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +30 1 @Base/…ay.jl:1076 array_new_mem… 1╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +31 1 @Base/…ot.jl:588 GenericMemory ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:4528 typeinf(interp::Compiler.N… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:232 finish_nocycle(::Compiler.… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:1021 optimize(interp::Compile… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:1048 run_passes_ipo_safe ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:1035 run_passes_ipo_safe(ci… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:79 ssa_inlining_pass! ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:663 batch_inline!(ir::Com… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:411 ir_inline_item!(comp… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:794 Compiler.Incrementa… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…ay.jl:679 _array_for ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…ay.jl:676 _array_for ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…ay.jl:872 similar ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…ay.jl:873 similar ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…ot.jl:661 Array ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +1 1 @Base/…ot.jl:648 Array 1╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +2 1 @Base/…ot.jl:588 GenericMemory ╎ ╎ ╎ 7 @Compiler/…ation.jl:4528 typeinf(interp::Compiler.NativeInte… ╎ ╎ ╎ 6 @Compiler/…infer.jl:232 finish_nocycle(::Compiler.NativeInt… ╎ ╎ ╎ 6 @Compiler/…mize.jl:1021 optimize(interp::Compiler.NativeIn… ╎ ╎ ╎ 6 @Compiler/…mize.jl:1048 run_passes_ipo_safe ╎ ╎ ╎ 6 @Compiler/…ize.jl:1035 run_passes_ipo_safe(ci::Core.Code… ╎ ╎ ╎ ╎ 2 @Compiler/…ing.jl:76 ssa_inlining_pass! ╎ ╎ ╎ ╎ 2 @Compiler/…ng.jl:1664 assemble_inline_todo!(ir::Compil… ╎ ╎ ╎ ╎ 2 @Compiler/…ng.jl:1413 handle_call! ╎ ╎ ╎ ╎ 2 @Compiler/…ng.jl:1381 compute_inlining_cases(info::C… ╎ ╎ ╎ ╎ 2 @Compiler/…g.jl:1309 handle_any_const_result! ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…g.jl:1321 handle_any_const_result!(case… ╎ ╎ ╎ ╎ ╎ 2 @Compiler/….jl:1421 handle_match! ╎ ╎ ╎ ╎ ╎ 2 @Compiler/….jl:1429 handle_match!(cases::Vector{… ╎ ╎ ╎ ╎ ╎ 2 @Compiler/….jl:921 analyze_method! ╎ ╎ ╎ ╎ ╎ 2 @Compiler/….jl:954 analyze_method!(match::Core… ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…jl:873 resolve_todo(mi::Core.Metho… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…jl:958 retrieve_ir_for_inlining 1╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…ls.jl:1609 _uncompressed_ir(codeinst… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…jl:959 retrieve_ir_for_inlining ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…jl:20 inflate_ir!(ci::Core.CodeI… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:24 inflate_ir!(ci::Core.CodeI… ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:102 compute_basic_blocks(stm… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…l:25 BasicBlock ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…ay.jl:411 getindex ╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…ot.jl:649 Array 1╎ ╎ ╎ ╎ ╎ ╎ ╎ 1 @Base/…ot.jl:594 memoryref ╎ ╎ ╎ ╎ 1 @Compiler/…ing.jl:79 ssa_inlining_pass! ╎ ╎ ╎ ╎ 1 @Compiler/…ing.jl:663 batch_inline!(ir::Compiler.IRCod… ╎ ╎ ╎ ╎ 1 @Compiler/…ng.jl:364 ir_inline_item!(compact::Compile… ╎ ╎ ╎ ╎ 1 @Compiler/…ng.jl:326 ir_prepare_inlining!(insert_nod… 1╎ ╎ ╎ ╎ 1 @Compiler/…ng.jl:313 ir_inline_linetable! ╎ ╎ ╎ ╎ 2 @Compiler/…/ir.jl:2146 compact! ╎ ╎ ╎ ╎ 1 @Compiler/…ir.jl:2146 compact!(code::Compiler.IRCode, … ╎ ╎ ╎ ╎ 1 @Compiler/…ir.jl:807 IncrementalCompact ╎ ╎ ╎ ╎ 1 @Compiler/…ir.jl:774 Compiler.IncrementalCompact(cod… ╎ ╎ ╎ ╎ 1 @Compiler/…ir.jl:267 Compiler.InstructionStream(len… ╎ ╎ ╎ ╎ ╎ 1 @Base/boot.jl:648 Array 1╎ ╎ ╎ ╎ ╎ 1 @Base/boot.jl:588 GenericMemory ╎ ╎ ╎ ╎ 1 @Compiler/…ir.jl:2148 compact!(code::Compiler.IRCode, … ╎ ╎ ╎ ╎ 1 @Compiler/…ir.jl:1871 iterate ╎ ╎ ╎ ╎ 1 @Compiler/…ir.jl:1949 iterate_compact(compact::Compi… ╎ ╎ ╎ ╎ 1 @Compiler/…r.jl:1535 process_node!(compact::Compile… ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…r.jl:1362 renumber_ssa2!(stmt::Any, ssa… ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…r.jl:661 iterate ╎ ╎ ╎ ╎ ╎ 1 @Compiler/….jl:653 _advance(stmt::Any, op::Int64) 1╎ ╎ ╎ ╎ ╎ 1 @Compiler/…r.jl:0 _useref_getindex(stmt::Any, o… ╎ ╎ ╎ ╎ 1 @Compiler/…ses.jl:2061 adce_pass!(ir::Compiler.IRCode, … ╎ ╎ ╎ ╎ 1 @Compiler/…/ir.jl:807 IncrementalCompact ╎ ╎ ╎ ╎ 1 @Compiler/…ir.jl:736 CFGTransformState!(blocks::Vecto… ╎ ╎ ╎ ╎ 1 @Compiler/…ee.jl:242 construct_domtree(blocks::Vecto… ╎ ╎ ╎ ╎ 1 @Compiler/…ee.jl:252 update_domtree! ╎ ╎ ╎ ╎ ╎ 1 @Compiler/…e.jl:177 DFS!(D::Compiler.DFSTree, bloc… ╎ ╎ ╎ ╎ ╎ 1 @Base/…rray.jl:1241 iterate ╎ ╎ ╎ ╎ ╎ 1 @Base/…rray.jl:1241 iterate ╎ ╎ ╎ ╎ ╎ 1 @Base/…rray.jl:1249 _iterate 1╎ ╎ ╎ ╎ ╎ 1 @Base/…ials.jl:967 getindex ╎ ╎ ╎ 1 @Compiler/…infer.jl:236 finish_nocycle(::Compiler.NativeInt… ╎ ╎ ╎ 1 @Compiler/…nfer.jl:135 finish!(interp::Compiler.NativeInte… ╎ ╎ ╎ 1 @Compiler/…mize.jl:298 ir_to_codeinf! ╎ ╎ ╎ 1 @Compiler/…mize.jl:307 ir_to_codeinf! 1╎ ╎ ╎ ╎ 1 @Compiler/…ize.jl:315 widen_all_consts!(src::Core.CodeI… ╎ ╎ 1 @Compiler/…einfer.jl:1562 typeinf_ext_toplevel 1╎ ╎ 1 @Compiler/…infer.jl:1555 add_codeinsts_to_jit!(interp::Compil… wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_30142.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== Parsed args: scale => "ftt" logdir => "/tmp/jl_fuzi2a" initW => nothing scheduling => "nag" epsilon => 1.0f-8 stepsize => "1.0e-15" dim => "3" lower => 0 rowvarlist => "" offsetStoch => 1.0f-6 expvar => 0.1f0 input => "/tmp/jl_BxjJI1/Data.zst" perm => false pseudocount => 1.0f0 colsumlist => "" numbatch => 100 rowmeanlist => "/tmp/jl_fuzi2a/Feature_FTTMeans.csv" evalfreq => 5000 cper => 1.0f0 outdir => "/tmp/jl_fuzi2a" g => 0.9f0 upper => 1.0f38 numepoch => "1" offsetFull => 1.0f-20 initV => nothing ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_30142.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007182376921d0 Total snapshots: 234. Utilization: 0% ╎234 @Base/task.jl:1129 wait_forever() 233╎ 234 @Base/task.jl:1192 wait() [812] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/OnlinePCA/AhPWT/test/test_svrg.jl:74 [1779] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/OnlinePCA/AhPWT/bin/svrg:145 jl_smallintset_lookup at /source/src/smallintset.c:143 jl_get_module_binding at /source/src/module.c:1528 emit_globalref at /source/src/codegen.cpp:3196 emit_expr at /source/src/codegen.cpp:6274 emit_call at /source/src/codegen.cpp:5405 emit_expr at /source/src/codegen.cpp:6350 emit_ssaval_assign at /source/src/codegen.cpp:5832 emit_stmtpos at /source/src/codegen.cpp:6139 emit_function at /source/src/codegen.cpp:9419 jl_emit_code at /source/src/codegen.cpp:9798 jl_emit_codeinst at /source/src/codegen.cpp:9869 jl_emit_codeinst_to_jit_impl at /source/src/jitlayers.cpp:817 add_codeinsts_to_jit! at ./../usr/share/julia/Compiler/src/typeinfer.jl:1555 typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1562 [inlined] typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1570 jfptr_typeinf_ext_toplevel_83848.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] jl_type_infer at /source/src/gf.c:462 jl_compile_method_internal at /source/src/gf.c:3514 _jl_invoke at /source/src/gf.c:4007 [inlined] ijl_apply_generic at /source/src/gf.c:4212 #svrg##0 at /home/pkgeval/.julia/packages/OnlinePCA/AhPWT/src/svrg.jl:103 #open#334 at ./io.jl:420 unknown function (ip: 0x7f6d5db6a5e8) at (unknown file) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 open at ./io.jl:417 svrg at /home/pkgeval/.julia/packages/OnlinePCA/AhPWT/src/svrg.jl:89 unknown function (ip: 0x7f6d5db63d0d) at (unknown file) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 #svrg#71 at /home/pkgeval/.julia/packages/OnlinePCA/AhPWT/src/svrg.jl:63 svrg at /home/pkgeval/.julia/packages/OnlinePCA/AhPWT/src/svrg.jl:47 unknown function (ip: 0x7f6d5db51b0b) at (unknown file) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 main at /home/pkgeval/.julia/packages/OnlinePCA/AhPWT/bin/svrg:120 unknown function (ip: 0x7f6d5db191df) at (unknown file) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2847 _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 _include at ./loading.jl:2907 include at ./Base.jl:311 exec_options at ./client.jl:320 _start at ./client.jl:553 jfptr__start_70166.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2375 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7f6d5eea4249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) Allocations: 20995956 (Pool: 20995636; Big: 320); GC: 11 PkgEval terminated after 2731.59s: test duration exceeded the time limit