Package evaluation of RecurrenceMicrostatesAnalysis on Julia 1.13.0-DEV.959 (b35c4f471f*) started at 2025-08-05T11:52:04.135 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.3s ################################################################################ # Installation # Installing RecurrenceMicrostatesAnalysis... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [cb83a08b] + RecurrenceMicrostatesAnalysis v0.2.24 Updating `~/.julia/environments/v1.13/Manifest.toml` [b4f34e82] + Distances v0.10.12 [cb83a08b] + RecurrenceMicrostatesAnalysis v0.2.24 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [56f22d72] + Artifacts v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [8e850b90] + libblastrampoline_jll v5.13.1+0 Installation completed after 1.18s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ MethodError: no method matching prune_manifest(::Pkg.Types.Manifest, ::Vector{UUID}) │ The function `prune_manifest` exists, but no method is defined for this combination of argument types. │ │ Closest candidates are: │ prune_manifest(::Pkg.Types.Manifest, !Matched::Set{UUID}) │ @ Pkg /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:1377 │ prune_manifest(!Matched::Pkg.Types.EnvCache) │ @ Pkg /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:1356 │ │ Stacktrace: │ [1] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/iS95e/src/julia-1.11/activate_set.jl:40 │ [2] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/iS95e/src/julia-1.11/activate_set.jl:9 │ [3] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [4] include(mod::Module, _path::String) │ @ Base ./Base.jl:311 │ [5] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:320 │ [6] _start() │ @ Base ./client.jl:553 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... 1494.2 ms ✓ RecurrenceMicrostatesAnalysis 1 dependency successfully precompiled in 2 seconds. 3 already precompiled. Precompilation completed after 16.71s ################################################################################ # Testing # Testing RecurrenceMicrostatesAnalysis Cloning git-repo `https://github.com/DynamicsUFPR/RMA.jl` Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating git-repo `https://github.com/DynamicsUFPR/RMA.jl` Testing failed after 5.67s ERROR: LoadError: name `RecurrenceMicrostatesAnalysis` given by project file `/tmp/jl_EKi0YQ/Project.toml` does not match given name `RMA` Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] resolve_projectfile!(pkg::PackageSpec, project_path::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:1027 [3] (::Pkg.Types.var"#handle_repo_add!##2#handle_repo_add!##3"{Pkg.Types.Context, PackageSpec, String})(repo::LibGit2.GitRepo) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:984 [4] with(f::Pkg.Types.var"#handle_repo_add!##2#handle_repo_add!##3"{Pkg.Types.Context, PackageSpec, String}, obj::LibGit2.GitRepo) @ LibGit2 /opt/julia/share/julia/stdlib/v1.13/LibGit2/src/types.jl:1208 [5] handle_repo_add!(ctx::Pkg.Types.Context, pkg::PackageSpec) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:927 [6] up_load_versions!(ctx::Pkg.Types.Context, pkg::PackageSpec, entry::Pkg.Types.PackageEntry, source_path::Nothing, source_repo::Pkg.Types.GitRepo, level::UpgradeLevel) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:1998 [7] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}, level::UpgradeLevel; skip_writing_project::Bool, preserve::Nothing) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2107 [8] up @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2094 [inlined] [9] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; level::UpgradeLevel, mode::PackageMode, preserve::Nothing, update_registry::Bool, skip_writing_project::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:436 [10] up @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:406 [inlined] [11] kwcall(::@NamedTuple{skip_writing_project::Bool, update_registry::Bool, io::IOContext{IO}}, ::typeof(Pkg.API.up), ctx::Pkg.Types.Context) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:173 [12] (::Pkg.Operations.var"#208#209"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#223#224"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec})() @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2458 [13] with_temp_env(fn::Pkg.Operations.var"#208#209"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#223#224"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec}, temp_env::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2314 [14] (::Pkg.Operations.var"#204#205"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#223#224"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec, String, String})(tmp::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2427 [15] mktempdir(fn::Pkg.Operations.var"#204#205"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#223#224"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec, String, String}, parent::String; prefix::String) @ Base.Filesystem ./file.jl:899 [16] mktempdir(fn::Function, parent::String) @ Base.Filesystem ./file.jl:895 [17] #sandbox#200 @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2374 [inlined] [18] kwcall(::@NamedTuple{preferences::Dict{String, Any}, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool}, ::typeof(Pkg.Operations.sandbox), fn::Function, ctx::Pkg.Types.Context, target::PackageSpec, sandbox_path::String, sandbox_project_override::Nothing) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2364 [19] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2638 [20] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2544 [inlined] [21] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:538 [22] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:515 [23] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:168 [24] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:157 [25] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [26] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [inlined] [27] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155 [28] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [29] include(mod::Module, _path::String) @ Base ./Base.jl:311 [30] exec_options(opts::Base.JLOptions) @ Base ./client.jl:320 [31] _start() @ Base ./client.jl:553 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 caused by: Cannot add stdlib `LibGit2_jll` with version specification `1.7.2+0`. The current Julia version v1.13.0-DEV.959 uses `LibGit2_jll` v1.9.1+0. Stacktrace: [1] check_stdlib_version_compat!(pkg::PackageSpec, julia_version::VersionNumber) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:549 [2] resolve_versions!(env::Pkg.Types.EnvCache, registries::Vector{Pkg.Registry.RegistryInstance}, pkgs::Vector{PackageSpec}, julia_version::VersionNumber, installed_only::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:614 [3] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}, level::UpgradeLevel; skip_writing_project::Bool, preserve::Nothing) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2120 [4] up @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2094 [inlined] [5] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; level::UpgradeLevel, mode::PackageMode, preserve::Nothing, update_registry::Bool, skip_writing_project::Bool, kwargs::@Kwargs{io::Base.DevNull}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:436 [6] up @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:406 [inlined] [7] up @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:173 [inlined] [8] #resolve#167 @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:442 [inlined] [9] resolve @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:441 [inlined] [10] (::Pkg.Operations.var"#208#209"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#223#224"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec})() @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2443 [11] with_temp_env(fn::Pkg.Operations.var"#208#209"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#223#224"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec}, temp_env::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2314 [12] (::Pkg.Operations.var"#204#205"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#223#224"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec, String, String})(tmp::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2427 [13] mktempdir(fn::Pkg.Operations.var"#204#205"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#223#224"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec, String, String}, parent::String; prefix::String) @ Base.Filesystem ./file.jl:899 [14] mktempdir(fn::Function, parent::String) @ Base.Filesystem ./file.jl:895 [15] #sandbox#200 @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2374 [inlined] [16] kwcall(::@NamedTuple{preferences::Dict{String, Any}, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool}, ::typeof(Pkg.Operations.sandbox), fn::Function, ctx::Pkg.Types.Context, target::PackageSpec, sandbox_path::String, sandbox_project_override::Nothing) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2364 [17] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2638 [18] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2544 [inlined] [19] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:538 [20] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:515 [21] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:168 [22] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:157 [23] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [24] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [inlined] [25] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155 [26] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [27] include(mod::Module, _path::String) @ Base ./Base.jl:311 [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:320 [29] _start() @ Base ./client.jl:553 PkgEval failed after 52.16s: there were unidentified errors