Package evaluation of QuasiGLM on Julia 1.13.0-DEV.959 (b35c4f471f*) started at 2025-08-05T17:49:20.561


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 9.92s


################################################################################
# Installation
#

Installing QuasiGLM...
   Resolving package versions...
    Updating `~/.julia/environments/v1.13/Project.toml`
  [e2a73505] + QuasiGLM v0.1.0
    Updating `~/.julia/environments/v1.13/Manifest.toml`
  [66dad0bd] + AliasTables v1.1.3
  [34da2185] + Compat v4.18.0
  [a8cc5b0e] + Crayons v4.1.1
  [9a962f9c] + DataAPI v1.16.0
⌃ [a93c6f00] + DataFrames v1.3.6
⌅ [864edb3b] + DataStructures v0.18.22
  [e2d170a0] + DataValueInterfaces v1.0.0
  [31c24e10] + Distributions v0.25.120
  [ffbed154] + DocStringExtensions v0.9.5
  [1a297f60] + FillArrays v1.13.0
  [59287772] + Formatting v0.4.3
  [38e38edf] + GLM v1.9.0
  [34004b35] + HypergeometricFunctions v0.3.28
  [41ab1584] + InvertedIndices v1.3.1
  [92d709cd] + IrrationalConstants v0.2.4
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.1
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [e1d29d7a] + Missings v1.2.0
  [bac558e1] + OrderedCollections v1.8.1
  [90014a1f] + PDMats v0.11.35
  [2dfb63ee] + PooledArrays v1.4.3
  [21216c6a] + Preferences v1.4.3
⌅ [08abe8d2] + PrettyTables v1.3.1
  [43287f4e] + PtrArrays v1.3.0
  [1fd47b50] + QuadGK v2.11.2
  [e2a73505] + QuasiGLM v0.1.0
  [189a3867] + Reexport v1.2.2
  [79098fc4] + Rmath v0.8.0
  [1277b4bf] + ShiftedArrays v2.0.0
  [a2af1166] + SortingAlgorithms v1.2.1
  [276daf66] + SpecialFunctions v2.5.1
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.7.1
  [2913bbd2] + StatsBase v0.34.5
  [4c63d2b9] + StatsFuns v1.5.0
  [3eaba693] + StatsModels v0.7.4
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.1
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [f50d1b31] + Rmath_jll v0.5.1+0
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [7b1f6079] + FileWatching v1.11.0
  [9fa8497b] + Future v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [de0858da] + Printf v1.11.0
  [3fa0cd96] + REPL v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.13.0
  [f489334b] + StyledStrings v1.11.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [05823500] + OpenLibm_jll v0.8.5+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [8e850b90] + libblastrampoline_jll v5.13.1+0
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`

Installation completed after 4.51s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 43.78s


################################################################################
# Testing
#

     Testing QuasiGLM
      Status `/tmp/jl_5RHiLX/Project.toml`
  [324d7699] CategoricalArrays v1.0.1
⌃ [a93c6f00] DataFrames v1.3.6
  [31c24e10] Distributions v0.25.120
  [38e38edf] GLM v1.9.0
⌅ [08abe8d2] PrettyTables v1.3.1
  [e2a73505] QuasiGLM v0.1.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_5RHiLX/Manifest.toml`
  [66dad0bd] AliasTables v1.1.3
  [324d7699] CategoricalArrays v1.0.1
  [34da2185] Compat v4.18.0
  [a8cc5b0e] Crayons v4.1.1
  [9a962f9c] DataAPI v1.16.0
⌃ [a93c6f00] DataFrames v1.3.6
⌅ [864edb3b] DataStructures v0.18.22
  [e2d170a0] DataValueInterfaces v1.0.0
  [31c24e10] Distributions v0.25.120
  [ffbed154] DocStringExtensions v0.9.5
  [1a297f60] FillArrays v1.13.0
  [59287772] Formatting v0.4.3
  [38e38edf] GLM v1.9.0
  [34004b35] HypergeometricFunctions v0.3.28
  [41ab1584] InvertedIndices v1.3.1
  [92d709cd] IrrationalConstants v0.2.4
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.7.1
  [2ab3a3ac] LogExpFunctions v0.3.29
  [e1d29d7a] Missings v1.2.0
  [bac558e1] OrderedCollections v1.8.1
  [90014a1f] PDMats v0.11.35
  [2dfb63ee] PooledArrays v1.4.3
  [21216c6a] Preferences v1.4.3
⌅ [08abe8d2] PrettyTables v1.3.1
  [43287f4e] PtrArrays v1.3.0
  [1fd47b50] QuadGK v2.11.2
  [e2a73505] QuasiGLM v0.1.0
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.1
  [79098fc4] Rmath v0.8.0
  [1277b4bf] ShiftedArrays v2.0.0
  [a2af1166] SortingAlgorithms v1.2.1
  [276daf66] SpecialFunctions v2.5.1
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.7.1
  [2913bbd2] StatsBase v0.34.5
  [4c63d2b9] StatsFuns v1.5.0
  [3eaba693] StatsModels v0.7.4
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.1
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [f50d1b31] Rmath_jll v0.5.1+0
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [7b1f6079] FileWatching v1.11.0
  [9fa8497b] Future v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.13.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [de0858da] Printf v1.11.0
  [3fa0cd96] REPL v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [f489334b] StyledStrings v1.11.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [4536629a] OpenBLAS_jll v0.3.29+0
  [05823500] OpenLibm_jll v0.8.5+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [8e850b90] libblastrampoline_jll v5.13.1+0
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading.
     Testing Running tests...
Precompiling packages...
   5308.5 ms  ✓ CategoricalArrays
  1 dependency successfully precompiled in 5 seconds. 12 already precompiled.
Precompiling packages...
   2819.4 ms  ✓ CategoricalArrays → CategoricalArraysStatsBaseExt
  1 dependency successfully precompiled in 3 seconds. 32 already precompiled.

QuasiGLM.jl: Error During Test at /home/pkgeval/.julia/packages/QuasiGLM/rfSqP/test/runtests.jl:5
  Got exception outside of a @test
  MethodError: no method matching StatsModels.ContrastsMatrix(::Matrix{Float64}, ::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}, ::Vector{CategoricalValue{Int64, UInt32}}, ::DummyCoding)
  The type `StatsModels.ContrastsMatrix` exists, but no method is defined for this combination of argument types when trying to construct it.
  Closest candidates are:
    StatsModels.ContrastsMatrix(::M, !Matched::Vector{U}, ::Vector{T}, ::C) where {U, T, C<:AbstractContrasts, M<:(AbstractMatrix)}
     @ StatsModels ~/.julia/packages/StatsModels/mPD8T/src/contrasts.jl:110
    StatsModels.ContrastsMatrix(!Matched::StatsModels.FullDummyCoding, ::AbstractVector{T}) where T
     @ StatsModels ~/.julia/packages/StatsModels/mPD8T/src/contrasts.jl:283
    StatsModels.ContrastsMatrix(!Matched::C, ::AbstractVector{T}) where {C<:AbstractContrasts, T}
     @ StatsModels ~/.julia/packages/StatsModels/mPD8T/src/contrasts.jl:160
    ...
  Stacktrace:
    [1] StatsModels.ContrastsMatrix(contrasts::DummyCoding, levels::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}})
      @ StatsModels ~/.julia/packages/StatsModels/mPD8T/src/contrasts.jl:207
    [2] concrete_term(t::Term, xs::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}, contrasts::DummyCoding)
      @ StatsModels ~/.julia/packages/StatsModels/mPD8T/src/schema.jl:214
    [3] concrete_term
      @ ~/.julia/packages/StatsModels/mPD8T/src/schema.jl:208 [inlined]
    [4] concrete_term(t::Term, xs::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}, ::Nothing)
      @ StatsModels ~/.julia/packages/StatsModels/mPD8T/src/schema.jl:207
    [5] concrete_term(t::Term, dt::@NamedTuple{Counts::Vector{Int64}, Outcome::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}, Treatment::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}}, hints::Dict{Symbol, Any})
      @ StatsModels ~/.julia/packages/StatsModels/mPD8T/src/schema.jl:186
    [6] (::StatsModels.var"#schema##0#schema##1"{@NamedTuple{Counts::Vector{Int64}, Outcome::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}, Treatment::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}}, Dict{Symbol, Any}})(t::Term)
      @ StatsModels ./none:-1
    [7] iterate
      @ ./generator.jl:48 [inlined]
    [8] Dict{Term, AbstractTerm}(kv::Base.Generator{Vector{Term}, StatsModels.var"#schema##0#schema##1"{@NamedTuple{Counts::Vector{Int64}, Outcome::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}, Treatment::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}}, Dict{Symbol, Any}}})
      @ Base ./dict.jl:95
    [9] Schema
      @ ~/.julia/packages/StatsModels/mPD8T/src/schema.jl:37 [inlined]
   [10] schema
      @ ~/.julia/packages/StatsModels/mPD8T/src/schema.jl:124 [inlined]
   [11] schema(f::FormulaTerm{Term, Tuple{Term, Term}}, data::@NamedTuple{Counts::Vector{Int64}, Outcome::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}, Treatment::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}}, hints::Dict{Symbol, Any})
      @ StatsModels ~/.julia/packages/StatsModels/mPD8T/src/schema.jl:128
   [12] ModelFrame(f::FormulaTerm{Term, Tuple{Term, Term}}, data::@NamedTuple{Counts::Vector{Int64}, Outcome::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}, Treatment::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}}; model::Type{GeneralizedLinearModel}, contrasts::Dict{Symbol, Any})
      @ StatsModels ~/.julia/packages/StatsModels/mPD8T/src/modelframe.jl:83
   [13] kwcall(::@NamedTuple{model::UnionAll, contrasts::Dict{Symbol, Any}}, ::Type{ModelFrame}, f::FormulaTerm{Term, Tuple{Term, Term}}, data::@NamedTuple{Counts::Vector{Int64}, Outcome::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}, Treatment::CategoricalVector{Int64, UInt32, Int64, CategoricalValue{Int64, UInt32}, Union{}}})
      @ StatsModels ~/.julia/packages/StatsModels/mPD8T/src/modelframe.jl:73
   [14] fit(::Type{GeneralizedLinearModel}, f::FormulaTerm{Term, Tuple{Term, Term}}, data::DataFrame, args::Poisson{Float64}; contrasts::Dict{Symbol, Any}, kwargs::@Kwargs{})
      @ StatsModels ~/.julia/packages/StatsModels/mPD8T/src/statsmodel.jl:85
   [15] fit(::Type{GeneralizedLinearModel}, f::FormulaTerm{Term, Tuple{Term, Term}}, data::DataFrame, args::Poisson{Float64})
      @ StatsModels ~/.julia/packages/StatsModels/mPD8T/src/statsmodel.jl:78
   [16] top-level scope
      @ ~/.julia/packages/QuasiGLM/rfSqP/test/runtests.jl:13
   [17] macro expansion
      @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1929 [inlined]
   [18] macro expansion
      @ ~/.julia/packages/QuasiGLM/rfSqP/test/runtests.jl:17 [inlined]
   [19] include(mapexpr::Function, mod::Module, _path::String)
      @ Base ./Base.jl:312
   [20] top-level scope
      @ none:6
   [21] eval(m::Module, e::Any)
      @ Core ./boot.jl:489
   [22] exec_options(opts::Base.JLOptions)
      @ Base ./client.jl:286
   [23] _start()
      @ Base ./client.jl:553
Test Summary: | Error  Total   Time
QuasiGLM.jl   |     1      1  39.8s
RNG of the outermost testset: Random.Xoshiro(0xe7320e111ddc34c2, 0xbdba8393fcdde648, 0xed2dc7a08b693477, 0xf28c91e411ec12fd, 0x641e7c2c4af872d8)
ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/QuasiGLM/rfSqP/test/runtests.jl:5

Testing failed after 73.48s

ERROR: LoadError: Package QuasiGLM errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2695
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2544 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:538
  [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:515
  [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:168
  [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:157
  [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156
  [9] test
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [inlined]
 [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String)
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155
 [11] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:219
 [12] include(mod::Module, _path::String)
    @ Base ./Base.jl:311
 [13] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:320
 [14] _start()
    @ Base ./client.jl:553
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 151.45s: package tests unexpectedly errored