Package evaluation of CatColabInterop on Julia 1.13.0-DEV.912 (a2457e6ed7*) started at 2025-07-28T04:38:07.505 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.81s ################################################################################ # Installation # Installing CatColabInterop... Resolving package versions... Installed Conda ── v1.10.2 Installed IJulia ─ v1.29.1 ┌ Warning: tarball content does not match git-tree-sha1 └ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:879 Cloning [227ef7b5-1206-438b-ac65-934d6da304b8] ACSets from https://github.com/AlgebraicJulia/ACSets.jl.git Installed ACSets ─ v0.2.24 Updating `~/.julia/environments/v1.13/Project.toml` [9ecda8fb] + CatColabInterop v0.1.0 Updating `~/.julia/environments/v1.13/Manifest.toml` [227ef7b5] + ACSets v0.2.24 [47edcb42] + ADTypes v1.15.0 [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [23cfdc9f] + AlgebraicInterfaces v0.1.4 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.19.0 [4c555306] + ArrayLayouts v1.11.2 [a9b6321e] + Atomix v1.1.1 [e2ed5e7c] + Bijections v0.2.2 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] + BracketingNonlinearSolve v1.3.0 [2a0fbf3d] + CPUSummary v0.2.6 [9ecda8fb] + CatColabInterop v0.1.0 ⌃ [134e5e36] + Catlab v0.16.19 [082447d4] + ChainRules v1.72.5 [d360d2e6] + ChainRulesCore v1.25.2 [fb6a15b2] + CloseOpenIntervals v0.1.13 ⌅ [3da002f7] + ColorTypes v0.11.5 ⌅ [5ae59095] + Colors v0.12.11 ⌃ [b1c52339] + CombinatorialSpaces v0.7.6 [861a8166] + Combinatorics v1.0.3 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [0fb5dd42] + CompTime v0.1.2 [34da2185] + Compat v4.17.0 [b0b7db55] + ComponentArrays v0.15.29 [a81c6b42] + Compose v0.9.6 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [8f4d0f93] + Conda v1.10.2 [187b0558] + ConstructionBase v1.6.0 ⌅ [b46f11dc] + CoordRefSystems v0.17.7 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 ⌃ [679ab3ea] + Decapodes v0.6.1 ⌅ [6f00c28b] + DiagrammaticEquations v0.1.10 [2b5f629d] + DiffEqBase v6.179.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.3 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [7c1d4256] + DynamicPolynomials v0.6.2 [4e289a0a] + EnumX v1.0.5 [f151be2c] + EnzymeCore v0.8.12 [d4d017d3] + ExponentialUtilities v1.27.0 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [411431e0] + Extents v0.1.6 [7034ab61] + FastBroadcast v0.3.5 [9aa1b823] + FastClosures v0.3.2 [442a2c76] + FastGaussQuadrature v1.0.2 [a4df4552] + FastPower v1.1.3 [5789e2e9] + FileIO v1.17.0 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [53c48c17] + FixedPointNumbers v0.8.5 [f6369f11] + ForwardDiff v1.0.1 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [d9f16b24] + Functors v0.5.2 ⌅ [f0ffcf3b] + GATlab v0.1.3 [46192b85] + GPUArraysCore v0.2.0 [6b9d7cbe] + GeneralizedGenerated v0.3.3 [c145ed77] + GenericSchur v0.5.5 [5c1252a2] + GeometryBasics v0.5.10 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[d28bc4f8] + OrdinaryDiffEqHighOrderRK v1.2.0 [9f002381] + OrdinaryDiffEqIMEXMultistep v1.4.0 [521117fe] + OrdinaryDiffEqLinear v1.3.0 [1344f307] + OrdinaryDiffEqLowOrderRK v1.3.0 [b0944070] + OrdinaryDiffEqLowStorageRK v1.3.0 [127b3ac7] + OrdinaryDiffEqNonlinearSolve v1.11.0 [c9986a66] + OrdinaryDiffEqNordsieck v1.1.0 [5dd0a6cf] + OrdinaryDiffEqPDIRK v1.3.1 [5b33eab2] + OrdinaryDiffEqPRK v1.1.0 [04162be5] + OrdinaryDiffEqQPRK v1.1.0 [af6ede74] + OrdinaryDiffEqRKN v1.2.0 [43230ef6] + OrdinaryDiffEqRosenbrock v1.12.0 [2d112036] + OrdinaryDiffEqSDIRK v1.4.0 [669c94d9] + OrdinaryDiffEqSSPRK v1.3.0 [e3e12d00] + OrdinaryDiffEqStabilizedIRK v1.3.0 [358294b1] + OrdinaryDiffEqStabilizedRK v1.2.0 [fa646aed] + OrdinaryDiffEqSymplecticRK v1.4.0 [b1df2697] + OrdinaryDiffEqTsit5 v1.2.0 [79d7bb75] + OrdinaryDiffEqVerner v1.3.0 [90014a1f] + PDMats v0.11.35 [12d937ae] + PEG v1.0.4 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [2ae35dd2] + Permutations v0.4.23 [f517fe37] + Polyester 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[c2297ded] + ZMQ v1.4.1 [e88e6eb3] + Zygote v0.7.10 [700de1a5] + ZygoteRules v0.2.7 [5ae413db] + EarCut_jll v2.2.4+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [856f044c] + MKL_jll v2025.2.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [02c8fc9c] + XML2_jll v2.14.4+0 [8f1865be] + ZeroMQ_jll v4.3.6+0 [a9144af2] + libsodium_jll v1.0.21+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.7.15 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [efcefdf7] + PCRE2_jll v10.45.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building Conda ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b19db3927f0db4151cb86d073689f2428e524576/build.log` Building IJulia → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/fe0a577aa6e9675224ca18b3ae7fdd8a27cd1ea6/build.log` Installation completed after 15.79s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 1094.81s ################################################################################ # Testing # Testing CatColabInterop Status `/tmp/jl_0tyrI4/Project.toml` [227ef7b5] ACSets v0.2.24 [9ecda8fb] CatColabInterop v0.1.0 ⌃ [b1c52339] CombinatorialSpaces v0.7.6 [b0b7db55] ComponentArrays v0.15.29 ⌃ [679ab3ea] Decapodes v0.6.1 ⌅ [6f00c28b] DiagrammaticEquations v0.1.10 [0f8b85d8] JSON3 v1.14.3 [d8e11817] MLStyle v0.4.17 [1dea7af3] OrdinaryDiffEq v6.101.0 [90137ffa] StaticArrays v1.9.14 [37e2e46d] LinearAlgebra v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_0tyrI4/Manifest.toml` [227ef7b5] ACSets v0.2.24 [47edcb42] ADTypes v1.15.0 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 [23cfdc9f] AlgebraicInterfaces v0.1.4 [66dad0bd] AliasTables v1.1.3 [4fba245c] ArrayInterface v7.19.0 [4c555306] ArrayLayouts v1.11.2 [a9b6321e] Atomix v1.1.1 [e2ed5e7c] Bijections v0.2.2 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] BracketingNonlinearSolve v1.3.0 [2a0fbf3d] CPUSummary v0.2.6 [9ecda8fb] CatColabInterop v0.1.0 ⌃ [134e5e36] Catlab v0.16.19 [082447d4] ChainRules v1.72.5 [d360d2e6] ChainRulesCore v1.25.2 [fb6a15b2] CloseOpenIntervals v0.1.13 ⌅ [3da002f7] ColorTypes v0.11.5 ⌅ [5ae59095] Colors v0.12.11 ⌃ [b1c52339] CombinatorialSpaces v0.7.6 [861a8166] Combinatorics v1.0.3 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [0fb5dd42] CompTime v0.1.2 [34da2185] Compat v4.17.0 [b0b7db55] ComponentArrays v0.15.29 [a81c6b42] Compose v0.9.6 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [8f4d0f93] Conda v1.10.2 [187b0558] ConstructionBase v1.6.0 ⌅ [b46f11dc] CoordRefSystems v0.17.7 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 ⌃ [679ab3ea] Decapodes v0.6.1 ⌅ [6f00c28b] DiagrammaticEquations v0.1.10 [2b5f629d] DiffEqBase v6.179.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.3 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.5 [7c1d4256] DynamicPolynomials v0.6.2 [4e289a0a] EnumX v1.0.5 [f151be2c] EnzymeCore v0.8.12 [d4d017d3] ExponentialUtilities v1.27.0 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [411431e0] Extents v0.1.6 [7034ab61] FastBroadcast v0.3.5 [9aa1b823] FastClosures v0.3.2 [442a2c76] FastGaussQuadrature v1.0.2 [a4df4552] FastPower v1.1.3 [5789e2e9] FileIO v1.17.0 [1a297f60] FillArrays v1.13.0 [6a86dc24] FiniteDiff v2.27.0 [53c48c17] FixedPointNumbers v0.8.5 [f6369f11] ForwardDiff v1.0.1 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 [d9f16b24] Functors v0.5.2 ⌅ [f0ffcf3b] GATlab v0.1.3 [46192b85] GPUArraysCore v0.2.0 [6b9d7cbe] GeneralizedGenerated v0.3.3 [c145ed77] GenericSchur v0.5.5 [5c1252a2] GeometryBasics v0.5.10 [34004b35] HypergeometricFunctions v0.3.28 [7073ff75] IJulia v1.29.1 [7869d1d1] IRTools v0.4.15 [615f187c] IfElse v0.1.1 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.4 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v0.21.4 [0f8b85d8] JSON3 v1.14.3 [ae98c720] Jieko v0.2.1 [b14d175d] JuliaVariables v0.2.4 [63c18a36] KernelAbstractions v0.9.38 [ba0b0d4f] Krylov v0.10.1 [b964fa9f] LaTeXStrings v1.4.0 [10f19ff3] LayoutPointers v0.1.17 [5078a376] LazyArrays v2.6.2 [9c8b4983] LightXML v0.9.2 [87fe0de2] LineSearch v0.1.4 [d3d80556] LineSearches v7.4.0 [7ed4a6bd] LinearSolve v3.23.0 [2ab3a3ac] LogExpFunctions v0.3.29 [d8e11817] MLStyle v0.4.17 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [bb5d69b7] MaybeInplace v0.1.4 [442fdcdd] Measures v0.3.2 [7269a6da] MeshIO v0.5.3 [e1d29d7a] Missings v1.2.0 [2e0e35c7] Moshi v0.3.7 [46d2c3a1] MuladdMacro v0.2.4 [102ac46a] MultivariatePolynomials v0.5.9 [d8a4904e] MutableArithmetics v1.6.4 [d41bc354] NLSolversBase v7.10.0 [77ba4419] NaNMath v1.1.3 [71a1bf82] NameResolution v0.1.5 [8913a72c] NonlinearSolve v4.10.0 [be0214bd] NonlinearSolveBase v1.13.0 [5959db7a] NonlinearSolveFirstOrder v1.6.0 [9a2c21bd] NonlinearSolveQuasiNewton v1.7.0 [26075421] NonlinearSolveSpectralMethods v1.2.0 [bac558e1] OrderedCollections v1.8.1 [1dea7af3] OrdinaryDiffEq v6.101.0 [89bda076] OrdinaryDiffEqAdamsBashforthMoulton v1.2.0 [6ad6398a] OrdinaryDiffEqBDF v1.7.0 [bbf590c4] OrdinaryDiffEqCore v1.26.2 [50262376] OrdinaryDiffEqDefault v1.5.0 [4302a76b] OrdinaryDiffEqDifferentiation v1.10.1 [9286f039] OrdinaryDiffEqExplicitRK v1.1.0 [e0540318] OrdinaryDiffEqExponentialRK v1.5.0 [becaefa8] OrdinaryDiffEqExtrapolation v1.5.0 [5960d6e9] OrdinaryDiffEqFIRK v1.13.0 [101fe9f7] OrdinaryDiffEqFeagin v1.1.0 [d3585ca7] OrdinaryDiffEqFunctionMap v1.2.0 [d28bc4f8] OrdinaryDiffEqHighOrderRK v1.2.0 [9f002381] OrdinaryDiffEqIMEXMultistep 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v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.5 [4c63d2b9] StatsFuns v1.5.0 [7792a7ef] StrideArraysCore v0.5.7 [892a3eda] StringManipulation v0.4.1 [09ab397b] StructArrays v0.7.1 [6ec83bb0] StructEquality v2.1.0 [856f2bd8] StructTypes v1.11.0 [2efcf032] SymbolicIndexingInterface v0.3.42 [d1185830] SymbolicUtils v3.29.0 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [ed4db957] TaskLocalValues v0.1.3 [8ea1fca8] TermInterface v2.0.0 [8290d209] ThreadingUtilities v0.5.5 [a759f4b9] TimerOutputs v0.5.29 [781d530d] TruncatedStacktraces v1.4.0 [3a884ed6] UnPack v1.0.2 [1986cc42] Unitful v1.23.1 [a7c27f48] Unityper v0.1.6 [013be700] UnsafeAtomics v0.3.0 [81def892] VersionParsing v1.3.0 [897b6980] WeakValueDicts v0.1.0 [c2297ded] ZMQ v1.4.1 [e88e6eb3] Zygote v0.7.10 [700de1a5] ZygoteRules v0.2.7 [5ae413db] EarCut_jll v2.2.4+0 [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0 [94ce4f54] Libiconv_jll v1.18.0+0 [856f044c] MKL_jll v2025.2.0+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [02c8fc9c] XML2_jll v2.14.4+0 [8f1865be] ZeroMQ_jll v4.3.6+0 [a9144af2] libsodium_jll v1.0.21+0 [1317d2d5] oneTBB_jll v2022.0.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+0 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.7.15 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.1+0 [efcefdf7] PCRE2_jll v10.45.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling packages... 240678.2 ms ✓ CombinatorialSpaces 122988.7 ms ✓ DiagrammaticEquations 131628.5 ms ✓ Decapodes Info Given CatColabInterop was explicitly requested, output will be shown live  WARNING: Detected access to binding `decapodeacset.Decapode` in a world prior to its definition world.  Julia 1.12 has introduced more strict world age semantics for global bindings.  !!! This code may malfunction under Revise.  !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `decapodeacset.NamedDecapode` in a world prior to its definition world.  Julia 1.12 has introduced more strict world age semantics for global bindings.  !!! This code may malfunction under Revise.  !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `decapodeacset.SummationDecapode` in a world prior to its definition world.  Julia 1.12 has introduced more strict world age semantics for global bindings.  !!! This code may malfunction under Revise.  !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Constructor for type "Decapode" was extended in `DiagrammaticEquations` without explicit qualification or import.  NOTE: Assumed "Decapode" refers to `decapodeacset.Decapode`. This behavior is deprecated and may differ in future versions.  NOTE: This behavior may have differed in Julia versions prior to 1.12.  Hint: If you intended to create a new generic function of the same name, use `function Decapode end`.  Hint: To silence the warning, qualify `Decapode` as `decapodeacset.Decapode` in the method signature or explicitly `import decapodeacset: Decapode`. WARNING: Constructor for type "SummationDecapode" was extended in `DiagrammaticEquations` without explicit qualification or import.  NOTE: Assumed "SummationDecapode" refers to `decapodeacset.SummationDecapode`. This behavior is deprecated and may differ in future versions.  NOTE: This behavior may have differed in Julia versions prior to 1.12.  Hint: If you intended to create a new generic function of the same name, use `function SummationDecapode end`.  Hint: To silence the warning, qualify `SummationDecapode` as `decapodeacset.SummationDecapode` in the method signature or explicitly `import decapodeacset: SummationDecapode`. WARNING: Constructor for type "Term" was extended in `DiagrammaticEquations` without explicit qualification or import.  NOTE: Assumed "Term" refers to `decapodes.Term`. This behavior is deprecated and may differ in future versions.  NOTE: This behavior may have differed in Julia versions prior to 1.12.  Hint: If you intended to create a new generic function of the same name, use `function Term end`.  Hint: To silence the warning, qualify `Term` as `decapodes.Term` in the method signature or explicitly `import decapodes: Term`. WARNING: Detected access to binding `CombinatorialMaps.RotationGraph` in a world prior to its definition world.  Julia 1.12 has introduced more strict world age semantics for global bindings.  !!! This code may malfunction under Revise.  !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `CombinatorialMaps.RotationSystem` in a world prior to its definition world.  Julia 1.12 has introduced more strict world age semantics for global bindings.  !!! This code may malfunction under Revise.  !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `CombinatorialMaps.CombinatorialMap` in a world prior to its definition world.  Julia 1.12 has introduced more strict world age semantics for global bindings.  !!! This code may malfunction under Revise.  !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`.  ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ======================================================================================  cmd: /opt/julia/bin/julia 387 running 1 of 1  signal (10): User defined signal 1 _ZNK4llvm11Instruction18getAllMetadataImplERNS_15SmallVectorImplISt4pairIjPNS_6MDNodeEEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN12_GLOBAL__N_18Verifier16visitInstructionERN4llvm11InstructionE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN12_GLOBAL__N_18Verifier6verifyERKN4llvm8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm12verifyModuleERKNS_6ModuleEPNS_11raw_ostreamEPb at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) verifyLLVMIR at /source/src/pipeline.cpp:878 run at /source/src/llvm-ptls.cpp:375 run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm11PassManagerINS_6ModuleENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/src/pipeline.cpp:791 operator() at /source/src/jitlayers.cpp:1513 withModuleDo<(anonymous namespace)::sizedOptimizerT::operator()(llvm::orc::ThreadSafeModule) [with long unsigned int N = 4]:: > at /source/usr/include/llvm/ExecutionEngine/Orc/ThreadSafeModule.h:136 [inlined] operator() at /source/src/jitlayers.cpp:1474 [inlined] operator() at /source/src/jitlayers.cpp:1626 [inlined] addModule at /source/src/jitlayers.cpp:2083 jl_compile_codeinst_now at /source/src/jitlayers.cpp:685 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:876 jl_compile_method_internal at /source/src/gf.c:3527 _jl_invoke at /source/src/gf.c:4007 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2350 [inlined] jl_f__apply_iterate at /source/src/builtins.c:864 #hook!##0 at /home/pkgeval/.julia/packages/DocStringExtensions/zNis6/src/templates.jl:11 _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2350 [inlined] jl_f__apply_iterate at /source/src/builtins.c:864 @doc at ./boot.jl:766 _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_invoke at /source/src/gf.c:4022 jl_invoke_julia_macro at /source/src/ast.c:1137 jl_expand_macros at /source/src/ast.c:1199 jl_fl_lower at /source/src/ast.c:1286 fl_lower at ./flfrontend.jl:24 jfptr_fl_lower_44615.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2350 [inlined] ijl_lower at /source/src/ast.c:1350 jl_toplevel_eval_flex at /source/src/toplevel.c:710 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 _include at ./loading.jl:2908 include at ./Base.jl:312 IncludeInto at ./Base.jl:313 jfptr_IncludeInto_35258.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2350 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_eval_module_expr at /source/src/toplevel.c:196 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:658 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 _include at ./loading.jl:2908 include at ./Base.jl:311 include_package_for_output at ./loading.jl:3002 jfptr_include_package_for_output_41080.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2350 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 include_string at ./loading.jl:2858 [inlined] exec_options at ./client.jl:318 _start at ./client.jl:553 jfptr__start_62689.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2350 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x71d0e16ba249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file)  ============================================================== Profile collected. A report will print at the next yield point ==============================================================   ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ======================================================================================  cmd: /opt/julia/bin/julia 343 running 0 of 1  signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_62428.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2350 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file)  ============================================================== Profile collected. A report will print at the next yield point ==============================================================  ┌ Error: Profile printing listener crashed │ exception = │ This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib. │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:44 │ [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing, from::Module) │ @ Base ./loading.jl:2763 │ [3] require_stdlib │ @ ./loading.jl:2759 [inlined] │ [4] macro expansion │ @ ./some.jl:158 [inlined] │ [5] profile_printing_listener(cond::Base.AsyncCondition) │ @ Base ./Base.jl:338 │ [6] (::Base.var"#start_profile_listener##0#start_profile_listener##1"{Base.AsyncCondition})() │ @ Base ./Base.jl:357 └ @ Base Base.jl:348  ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ======================================================================================  cmd: /opt/julia/bin/julia 275 running 0 of 1  signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_62428.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2350 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file)  ============================================================== Profile collected. A report will print at the next yield point ==============================================================  ┌ Error: Profile printing listener crashed │ exception = │ This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib. │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:44 │ [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing, from::Module) │ @ Base ./loading.jl:2763 │ [3] require_stdlib │ @ ./loading.jl:2759 [inlined] │ [4] macro expansion │ @ ./some.jl:158 [inlined] │ [5] profile_printing_listener(cond::Base.AsyncCondition) │ @ Base ./Base.jl:338 │ [6] (::Base.var"#start_profile_listener##0#start_profile_listener##1"{Base.AsyncCondition})() │ @ Base ./Base.jl:357 └ @ Base Base.jl:348 ┌ Error: Profile printing listener crashed │ exception = │ This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib. │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:44 │ [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing, from::Module) │ @ Base ./loading.jl:2763 │ [3] require_stdlib │ @ ./loading.jl:2759 [inlined] │ [4] macro expansion │ @ ./some.jl:158 [inlined] │ [5] profile_printing_listener(cond::Base.AsyncCondition) │ @ Base ./Base.jl:338 │ [6] (::Base.var"#start_profile_listener##0#start_profile_listener##1"{Base.AsyncCondition})() │ @ Base ./Base.jl:357 └ @ Base Base.jl:348  ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ======================================================================================  cmd: /opt/julia/bin/julia 203 running 0 of 1  signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_62428.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2350 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file)  ============================================================== Profile collected. A report will print at the next yield point ==============================================================  ┌ Error: Profile printing listener crashed │ exception = │ This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib. │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:44 │ [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing, from::Module) │ @ Base ./loading.jl:2763 │ [3] require_stdlib │ @ ./loading.jl:2759 [inlined] │ [4] macro expansion │ @ ./some.jl:158 [inlined] │ [5] profile_printing_listener(cond::Base.AsyncCondition) │ @ Base ./Base.jl:338 │ [6] (::Base.var"#start_profile_listener##0#start_profile_listener##1"{Base.AsyncCondition})() │ @ Base ./Base.jl:357 └ @ Base Base.jl:348 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 151 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_62428.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2350 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007eeb552cc100 Total snapshots: 459. Utilization: 0% ╎459 @Base/task.jl:1129 wait_forever() 458╎ 459 @Base/task.jl:1192 wait() ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_62428.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2350 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x0000769f700fdc30 Total snapshots: 412. Utilization: 0% ╎412 @Base/task.jl:1129 wait_forever() 411╎ 412 @Base/task.jl:1192 wait() [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_62428.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2350 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 32788887 (Pool: 32788243; Big: 644); GC: 26  [203] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/CatColabInterop/hmaco/src/decapodes-service/DecapodesService.jl:23 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_62428.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2350 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 31828698 (Pool: 31828192; Big: 506); GC: 43 [151] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/CatColabInterop/hmaco/test/runtests.jl:3 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_62428.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2350 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 22461744 (Pool: 22461526; Big: 218); GC: 51  PkgEval terminated after 2765.29s: test duration exceeded the time limit