Package evaluation of VCFTools on Julia 1.13.0-DEV.897 (a39797a4fb*) started at 2025-07-24T18:03:26.251 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.78s ################################################################################ # Installation # Installing VCFTools... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [a620830f] + VCFTools v0.2.10 Updating `~/.julia/environments/v1.13/Manifest.toml` [7d9f7c33] + Accessors v0.1.42 [66dad0bd] + AliasTables v1.1.3 ⌅ [67c07d97] + Automa v0.8.4 [28d598bf] + BGZFStreams v0.3.2 [47718e42] + BioGenerics v0.1.5 [e1450e63] + BufferedStreams v1.2.2 [944b1d66] + CodecZlib v0.7.8 [861a8166] + Combinatorics v1.0.3 [38540f10] + CommonSolve v0.2.4 [34da2185] + Compat v4.17.0 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [8bb1440f] + DelimitedFiles v1.9.1 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [1a297f60] + FillArrays v1.13.0 [34004b35] + HypergeometricFunctions v0.3.28 [09f84164] + HypothesisTests v0.11.5 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [692b3bcd] + JLLWrappers v1.7.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [21216c6a] + Preferences v1.4.3 [92933f4c] + ProgressMeter v1.10.4 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [189a3867] + Reexport v1.2.2 [79098fc4] + Rmath v0.8.0 [f2b01f46] + Roots v2.2.8 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.1 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.5 [4c63d2b9] + StatsFuns v1.5.0 ⌅ [3bb67fe8] + TranscodingStreams v0.9.13 [a620830f] + VCFTools v0.2.10 [28eba6e3] + VariantCallFormat v0.5.6 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.13.1+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 4.56s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 34.15s ################################################################################ # Testing # Testing VCFTools Status `/tmp/jl_2GdOr4/Project.toml` [336ed68f] CSV v0.10.15 [944b1d66] CodecZlib v0.7.8 [a93c6f00] DataFrames v1.7.0 [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.120 [09f84164] HypothesisTests v0.11.5 [92933f4c] ProgressMeter v1.10.4 [276daf66] SpecialFunctions v2.5.1 [2913bbd2] StatsBase v0.34.5 [a620830f] VCFTools v0.2.10 [28eba6e3] VariantCallFormat v0.5.6 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_2GdOr4/Manifest.toml` [7d9f7c33] Accessors v0.1.42 [66dad0bd] AliasTables v1.1.3 ⌅ [67c07d97] Automa v0.8.4 [28d598bf] BGZFStreams v0.3.2 [47718e42] BioGenerics v0.1.5 [e1450e63] BufferedStreams v1.2.2 [336ed68f] CSV v0.10.15 [944b1d66] CodecZlib v0.7.8 [861a8166] Combinatorics v1.0.3 [38540f10] CommonSolve v0.2.4 [34da2185] Compat v4.17.0 [a33af91c] CompositionsBase v0.1.2 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.7.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.5 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.13.0 [34004b35] HypergeometricFunctions v0.3.28 [09f84164] HypothesisTests v0.11.5 [842dd82b] InlineStrings v1.4.4 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.4 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [b964fa9f] LaTeXStrings v1.4.0 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.35 [69de0a69] Parsers v2.8.3 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [92933f4c] ProgressMeter v1.10.4 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [189a3867] Reexport v1.2.2 [79098fc4] Rmath v0.8.0 [f2b01f46] Roots v2.2.8 [91c51154] SentinelArrays v1.4.8 [a2af1166] SortingAlgorithms v1.2.1 [276daf66] SpecialFunctions v2.5.1 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.5 [4c63d2b9] StatsFuns v1.5.0 [892a3eda] StringManipulation v0.4.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 ⌅ [3bb67fe8] TranscodingStreams v0.9.13 [a620830f] VCFTools v0.2.10 [28eba6e3] VariantCallFormat v0.5.6 [ea10d353] WeakRefStrings v1.4.2 [76eceee3] WorkerUtilities v1.6.1 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.14.1+1 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.7.15 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.1+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... 86307.5 ms ✓ DataFrames 1 dependency successfully precompiled in 87 seconds. 34 already precompiled. Test Summary: | Pass Total Time H-W test | 1 1 3.8s Test Summary: | Pass Total Time openvcf | 4 4 3.6s Test Summary: | Pass Total Time nrecords(vcf) | 1 1 2.3s Test Summary: | Pass Total Time nsamples(vcf) | 1 1 0.0s Test Summary: | Pass Total Time gtstats(record) | 4 4 2.3s ┌ Warning: `Progress(n::Integer, dt::Real, desc::AbstractString = "Progress: ", barlen = nothing, color::Symbol = :green, output::IO = stderr; offset::Integer = 0)` is deprecated, use `Progress(n; dt = dt, desc = desc, barlen = barlen, color = color, output = output, offset = offset)` instead. │ caller = ip:0x0 └ @ Core :-1 Progress: 0%| | ETA: 0:24:26 Progress: 100%|█████████████████████████████████████████| Time: 0:00:02 14.001241 seconds (10.58 M allocations: 663.832 MiB, 5.01% gc time, 95.49% compilation time: 21% of which was recompilation) 0.488392 seconds (2.86 M allocations: 196.035 MiB, 11.32% gc time, 17.37% compilation time: <1% of which was recompilation) Progress: 0%| | ETA: 0:22:04 Progress: 100%|█████████████████████████████████████████| Time: 0:00:02 2.382450 seconds (4.37 M allocations: 298.016 MiB, 3.20% gc time, 82.03% compilation time) 0.431869 seconds (2.85 M allocations: 195.342 MiB, 6.82% gc time) Test Summary: | Pass Total Time gtstats(vcf) | 12 12 20.9s Test Summary: | Pass Total Time get sampleID | 4 4 0.0s Test Summary: | Pass Total Time Fishers exact HWE test | 20 20 0.0s Test Summary: | Pass Total Time filter_genotype(record) | 9 9 1.9s Test Summary: | Pass Total Time filter_genotype(file) | 4068 4068 2.1s Test Summary: | Pass Total Time flip_gt_allele | 4 4 0.9s Test Summary: | Pass Total Time match_gt_allele | 4 4 0.1s Test Summary: | Pass Total Time binomial_proportion_test | 2 2 5.8s [ Info: Scan IDs in reference panel Progress: 0%| | ETA: 0:19:09 Progress: 0%|▏ | ETA: 0:18:40 Progress: 0%|▏ | ETA: 0:18:32 Progress: 0%|▏ | ETA: 0:18:23 Progress: 0%|▏ | ETA: 0:18:20 Progress: 1%|▎ | ETA: 0:18:18 Progress: 1%|▎ | ETA: 0:18:14 Progress: 1%|▎ | ETA: 0:18:17 Progress: 1%|▍ | ETA: 0:18:14 Progress: 1%|▍ | ETA: 0:18:12 Progress: 1%|▍ | ETA: 0:18:10 Progress: 1%|▌ | ETA: 0:18:08 Progress: 1%|▌ | ETA: 0:18:06 Progress: 1%|▌ | ETA: 0:18:04 Progress: 1%|▋ | ETA: 0:18:02 Progress: 1%|▋ | ETA: 0:17:59 Progress: 2%|▋ | ETA: 0:17:56 Progress: 2%|▋ | ETA: 0:17:55 Progress: 2%|▊ | ETA: 0:17:53 Progress: 2%|▊ | ETA: 0:17:51 Progress: 2%|▊ | ETA: 0:17:49 Progress: 2%|▉ | ETA: 0:17:48 Progress: 2%|▉ | ETA: 0:17:48 Progress: 2%|▉ | ETA: 0:17:46 Progress: 2%|█ | ETA: 0:17:45 Progress: 2%|█ | ETA: 0:17:45 Progress: 2%|█ | ETA: 0:17:44 Progress: 3%|█ | ETA: 0:17:43 Progress: 3%|█▏ | ETA: 0:17:42 Progress: 3%|█▏ | ETA: 0:17:41 Progress: 3%|█▏ | ETA: 0:17:40 Progress: 3%|█▎ | ETA: 0:17:39 Progress: 3%|█▎ | ETA: 0:17:38 Progress: 3%|█▎ | ETA: 0:17:36 Progress: 3%|█▍ | ETA: 0:17:36 Progress: 3%|█▍ | ETA: 0:17:35 Progress: 3%|█▍ | ETA: 0:17:34 Progress: 4%|█▍ | ETA: 0:17:33 Progress: 4%|█▌ | ETA: 0:17:32 Progress: 4%|█▌ | ETA: 0:17:31 Progress: 4%|█▌ | ETA: 0:17:30 Progress: 4%|█▋ | ETA: 0:17:29 Progress: 4%|█▋ | ETA: 0:17:28 Progress: 4%|█▋ | ETA: 0:17:26 Progress: 4%|█▊ | ETA: 0:17:25 Progress: 4%|█▊ | ETA: 0:17:24 Progress: 4%|█▊ | ETA: 0:17:23 Progress: 4%|█▉ | ETA: 0:17:22 Progress: 5%|█▉ | ETA: 0:17:21 Progress: 5%|█▉ | ETA: 0:17:20 Progress: 5%|█▉ | ETA: 0:17:19 Progress: 5%|██ | ETA: 0:17:18 Progress: 5%|██ | ETA: 0:17:17 Progress: 5%|██ | ETA: 0:17:16 Progress: 5%|██▏ | ETA: 0:17:15 Progress: 5%|██▏ | ETA: 0:17:14 Progress: 5%|██▏ | ETA: 0:17:13 Progress: 5%|██▎ | ETA: 0:17:12 Progress: 5%|██▎ | ETA: 0:17:11 Progress: 6%|██▎ | ETA: 0:17:09 Progress: 6%|██▎ | ETA: 0:17:08 Progress: 6%|██▍ | ETA: 0:17:08 Progress: 6%|██▍ | ETA: 0:17:07 Progress: 6%|██▍ | ETA: 0:17:06 Progress: 6%|██▌ | ETA: 0:17:05 Progress: 6%|██▌ | ETA: 0:17:04 Progress: 6%|██▌ | ETA: 0:17:03 Progress: 6%|██▋ | ETA: 0:17:02 Progress: 6%|██▋ | ETA: 0:17:01 Progress: 6%|██▋ | ETA: 0:17:00 Progress: 7%|██▋ | ETA: 0:16:59 Progress: 7%|██▊ | ETA: 0:16:58 Progress: 7%|██▊ | ETA: 0:16:56 Progress: 7%|██▊ | ETA: 0:16:55 Progress: 7%|██▉ | ETA: 0:16:54 Progress: 7%|██▉ | ETA: 0:16:53 Progress: 7%|██▉ | ETA: 0:16:52 Progress: 7%|███ | ETA: 0:16:51 Progress: 7%|███ | ETA: 0:16:51 Progress: 7%|███ | ETA: 0:16:50 Progress: 7%|███▏ | ETA: 0:16:49 Progress: 8%|███▏ | ETA: 0:16:48 Progress: 8%|███▏ | ETA: 0:16:47 Progress: 8%|███▏ | ETA: 0:16:46 Progress: 8%|███▎ | ETA: 0:16:45 Progress: 8%|███▎ | ETA: 0:16:44 Progress: 8%|███▎ | ETA: 0:16:43 Progress: 8%|███▍ | ETA: 0:16:42 Progress: 8%|███▍ | ETA: 0:16:41 Progress: 8%|███▍ | ETA: 0:16:41 Progress: 8%|███▌ | ETA: 0:16:40 Progress: 8%|███▌ | ETA: 0:16:39 Progress: 9%|███▌ | ETA: 0:16:37 Progress: 9%|███▌ | ETA: 0:16:36 Progress: 9%|███▋ | ETA: 0:16:35 Progress: 9%|███▋ | ETA: 0:16:34 Progress: 9%|███▋ | ETA: 0:16:33 Progress: 9%|███▊ | ETA: 0:16:31 Progress: 9%|███▊ | ETA: 0:16:30 Progress: 9%|███▊ | ETA: 0:16:29 Progress: 9%|███▉ | ETA: 0:16:28 Progress: 9%|███▉ | ETA: 0:16:27 Progress: 10%|███▉ | ETA: 0:16:26 Progress: 10%|████ | ETA: 0:16:25 Progress: 10%|████ | ETA: 0:16:24 Progress: 10%|████ | ETA: 0:16:23 Progress: 10%|████ | ETA: 0:16:22 Progress: 10%|████▏ | ETA: 0:16:21 Progress: 10%|████▏ | ETA: 0:16:20 Progress: 10%|████▏ | ETA: 0:16:19 Progress: 10%|████▎ | ETA: 0:16:18 Progress: 100%|█████████████████████████████████████████| Time: 0:01:52 [ Info: Match target IDs to reference IDs Progress: 0%| | ETA: 20:43:27 Progress: 19%|███████▋ | ETA: 0:08:05 Progress: 38%|███████████████▍ | ETA: 0:03:06 Progress: 58%|███████████████████████▉ | ETA: 0:01:21 Progress: 79%|████████████████████████████████▍ | ETA: 0:00:31 Progress: 99%|█████████████████████████████████████████| ETA: 0:00:00 Progress: 100%|█████████████████████████████████████████| Time: 0:01:55 [ Info: 823 records are matched 240.086274 seconds (2.19 G allocations: 143.741 GiB, 6.68% gc time, 0.52% compilation time: 4% of which was recompilation) [ Info: Scan IDs in reference panel Progress: 0%| | ETA: 0:18:46 Progress: 0%|▏ | ETA: 0:18:45 Progress: 0%|▏ | ETA: 0:18:40 Progress: 0%|▏ | ETA: 0:18:29 Progress: 0%|▏ | ETA: 0:18:22 Progress: 1%|▎ | ETA: 0:18:19 Progress: 1%|▎ | ETA: 0:18:19 Progress: 1%|▎ | ETA: 0:18:19 Progress: 1%|▍ | ETA: 0:18:19 Progress: 1%|▍ | ETA: 0:18:19 Progress: 1%|▍ | ETA: 0:18:18 Progress: 1%|▌ | ETA: 0:18:17 Progress: 1%|▌ | ETA: 0:18:16 Progress: 1%|▌ | ETA: 0:18:16 Progress: 1%|▌ | ETA: 0:18:15 Progress: 1%|▋ | ETA: 0:18:15 Progress: 2%|▋ | ETA: 0:18:13 Progress: 2%|▋ | ETA: 0:18:10 Progress: 2%|▊ | ETA: 0:18:08 Progress: 2%|▊ | ETA: 0:18:07 Progress: 2%|▊ | ETA: 0:18:06 Progress: 2%|▉ | ETA: 0:18:05 Progress: 2%|▉ | ETA: 0:18:04 Progress: 2%|▉ | ETA: 0:18:04 Progress: 2%|▉ | ETA: 0:18:03 Progress: 2%|█ | ETA: 0:18:02 Progress: 2%|█ | ETA: 0:18:01 Progress: 3%|█ | ETA: 0:18:00 Progress: 3%|█▏ | ETA: 0:17:59 Progress: 3%|█▏ | ETA: 0:17:58 Progress: 3%|█▏ | ETA: 0:17:58 Progress: 3%|█▎ | ETA: 0:17:57 Progress: 3%|█▎ | ETA: 0:17:56 Progress: 3%|█▎ | ETA: 0:17:56 Progress: 3%|█▎ | ETA: 0:17:55 Progress: 3%|█▍ | ETA: 0:17:54 Progress: 3%|█▍ | ETA: 0:17:54 Progress: 3%|█▍ | ETA: 0:17:53 Progress: 4%|█▌ | ETA: 0:17:53 Progress: 4%|█▌ | ETA: 0:17:52 Progress: 4%|█▌ | ETA: 0:17:52 Progress: 4%|█▌ | ETA: 0:17:51 Progress: 4%|█▋ | ETA: 0:17:51 Progress: 4%|█▋ | ETA: 0:17:50 Progress: 4%|█▋ | ETA: 0:17:48 Progress: 4%|█▊ | ETA: 0:17:47 Progress: 4%|█▊ | ETA: 0:17:46 Progress: 4%|█▊ | ETA: 0:17:44 Progress: 4%|█▉ | ETA: 0:17:43 Progress: 5%|█▉ | ETA: 0:17:41 Progress: 5%|█▉ | ETA: 0:17:40 Progress: 5%|█▉ | ETA: 0:17:39 Progress: 5%|██ | ETA: 0:17:38 Progress: 5%|██ | ETA: 0:17:37 Progress: 5%|██ | ETA: 0:17:36 Progress: 5%|██▏ | ETA: 0:17:35 Progress: 5%|██▏ | ETA: 0:17:35 Progress: 5%|██▏ | ETA: 0:17:34 Progress: 5%|██▏ | ETA: 0:17:32 Progress: 5%|██▎ | ETA: 0:17:31 Progress: 6%|██▎ | ETA: 0:17:31 Progress: 6%|██▎ | ETA: 0:17:30 Progress: 6%|██▍ | ETA: 0:17:29 Progress: 6%|██▍ | ETA: 0:17:28 Progress: 6%|██▍ | ETA: 0:17:27 Progress: 6%|██▌ | ETA: 0:17:26 Progress: 6%|██▌ | ETA: 0:17:25 Progress: 6%|██▌ | ETA: 0:17:24 Progress: 6%|██▌ | ETA: 0:17:24 Progress: 6%|██▋ | ETA: 0:17:23 Progress: 6%|██▋ | ETA: 0:17:22 Progress: 6%|██▋ | ETA: 0:17:21 Progress: 7%|██▊ | ETA: 0:17:20 Progress: 7%|██▊ | ETA: 0:17:19 Progress: 7%|██▊ | ETA: 0:17:18 Progress: 7%|██▊ | ETA: 0:17:17 Progress: 7%|██▉ | ETA: 0:17:16 Progress: 7%|██▉ | ETA: 0:17:15 Progress: 7%|██▉ | ETA: 0:17:14 Progress: 7%|███ | ETA: 0:17:13 Progress: 7%|███ | ETA: 0:17:12 Progress: 7%|███ | ETA: 0:17:11 Progress: 7%|███▏ | ETA: 0:17:10 Progress: 8%|███▏ | ETA: 0:17:09 Progress: 8%|███▏ | ETA: 0:17:08 Progress: 8%|███▏ | ETA: 0:17:07 Progress: 8%|███▎ | ETA: 0:17:06 Progress: 8%|███▎ | ETA: 0:17:05 Progress: 8%|███▎ | ETA: 0:17:04 Progress: 8%|███▍ | ETA: 0:17:03 Progress: 8%|███▍ | ETA: 0:17:02 Progress: 8%|███▍ | ETA: 0:17:01 Progress: 8%|███▌ | ETA: 0:17:00 Progress: 8%|███▌ | ETA: 0:16:59 Progress: 9%|███▌ | ETA: 0:16:58 Progress: 9%|███▌ | ETA: 0:16:57 Progress: 9%|███▋ | ETA: 0:16:56 Progress: 9%|███▋ | ETA: 0:16:55 Progress: 9%|███▋ | ETA: 0:16:54 Progress: 9%|███▊ | ETA: 0:16:53 Progress: 9%|███▊ | ETA: 0:16:52 Progress: 9%|███▊ | ETA: 0:16:51 Progress: 9%|███▊ | ETA: 0:16:50 Progress: 9%|███▉ | ETA: 0:16:49 Progress: 9%|███▉ | ETA: 0:16:48 Progress: 10%|███▉ | ETA: 0:16:47 Progress: 10%|████ | ETA: 0:16:46 Progress: 10%|████ | ETA: 0:16:45 Progress: 10%|████ | ETA: 0:16:44 Progress: 10%|████▏ | ETA: 0:16:43 Progress: 10%|████▏ | ETA: 0:16:42 Progress: 10%|████▏ | ETA: 0:16:41 Progress: 10%|████▏ | ETA: 0:16:41 Progress: 10%|████▎ | ETA: 0:16:40 Progress: 100%|█████████████████████████████████████████| Time: 0:01:55 [ Info: Match target IDs to reference IDs Progress: 0%| | ETA: 21:02:34 Progress: 18%|███████▎ | ETA: 0:08:42 Progress: 36%|██████████████▊ | ETA: 0:03:24 Progress: 56%|███████████████████████ | ETA: 0:01:30 Progress: 76%|███████████████████████████████▍ | ETA: 0:00:36 Progress: 98%|████████████████████████████████████████▏| ETA: 0:00:03 Progress: 100%|█████████████████████████████████████████| Time: 0:01:57 [ Info: 488 records are matched 242.961048 seconds (2.19 G allocations: 143.726 GiB, 6.79% gc time, 0.34% compilation time) [ Info: Scan IDs in reference panel Progress: 0%| | ETA: 0:21:00 Progress: 0%|▏ | ETA: 0:20:19 Progress: 0%|▏ | ETA: 0:20:05 Progress: 0%|▏ | ETA: 0:19:55 Progress: 0%|▏ | ETA: 0:19:46 Progress: 1%|▎ | ETA: 0:19:38 Progress: 1%|▎ | ETA: 0:19:28 Progress: 1%|▎ | ETA: 0:19:18 Progress: 1%|▍ | ETA: 0:19:10 Progress: 1%|▍ | ETA: 0:18:59 Progress: 1%|▍ | ETA: 0:18:50 Progress: 1%|▍ | ETA: 0:18:44 Progress: 1%|▌ | ETA: 0:18:39 Progress: 1%|▌ | ETA: 0:18:37 Progress: 1%|▌ | ETA: 0:18:38 Progress: 1%|▋ | ETA: 0:18:38 Progress: 2%|▋ | ETA: 0:18:38 Progress: 2%|▋ | ETA: 0:18:37 Progress: 2%|▊ | ETA: 0:18:36 Progress: 2%|▊ | ETA: 0:18:36 Progress: 2%|▊ | ETA: 0:18:36 Progress: 2%|▊ | ETA: 0:18:35 Progress: 2%|▉ | ETA: 0:18:36 Progress: 2%|▉ | ETA: 0:18:33 Progress: 2%|▉ | ETA: 0:18:30 Progress: 2%|█ | ETA: 0:18:28 Progress: 2%|█ | ETA: 0:18:27 Progress: 2%|█ | ETA: 0:18:26 Progress: 3%|█ | ETA: 0:18:28 Progress: 3%|█▏ | ETA: 0:18:29 Progress: 3%|█▏ | ETA: 0:18:29 Progress: 3%|█▏ | ETA: 0:18:28 Progress: 3%|█▎ | ETA: 0:18:27 Progress: 3%|█▎ | ETA: 0:18:26 Progress: 3%|█▎ | ETA: 0:18:25 Progress: 3%|█▎ | ETA: 0:18:24 Progress: 3%|█▍ | ETA: 0:18:24 Progress: 3%|█▍ | ETA: 0:18:23 Progress: 3%|█▍ | ETA: 0:18:23 Progress: 4%|█▌ | ETA: 0:18:23 Progress: 4%|█▌ | ETA: 0:18:23 Progress: 4%|█▌ | ETA: 0:18:22 Progress: 4%|█▌ | ETA: 0:18:21 Progress: 4%|█▋ | ETA: 0:18:20 Progress: 4%|█▋ | ETA: 0:18:19 Progress: 4%|█▋ | ETA: 0:18:17 Progress: 4%|█▊ | ETA: 0:18:16 Progress: 4%|█▊ | ETA: 0:18:14 Progress: 4%|█▊ | ETA: 0:18:13 Progress: 4%|█▊ | ETA: 0:18:11 Progress: 5%|█▉ | ETA: 0:18:09 Progress: 5%|█▉ | ETA: 0:18:07 Progress: 5%|█▉ | ETA: 0:18:05 Progress: 5%|██ | ETA: 0:18:04 Progress: 5%|██ | ETA: 0:18:03 Progress: 5%|██ | ETA: 0:18:01 Progress: 5%|██▏ | ETA: 0:18:00 Progress: 5%|██▏ | ETA: 0:17:58 Progress: 5%|██▏ | ETA: 0:17:57 Progress: 5%|██▏ | ETA: 0:17:56 Progress: 5%|██▎ | ETA: 0:17:55 Progress: 6%|██▎ | ETA: 0:17:54 Progress: 6%|██▎ | ETA: 0:17:53 Progress: 6%|██▍ | ETA: 0:17:52 Progress: 6%|██▍ | ETA: 0:17:50 Progress: 6%|██▍ | ETA: 0:17:49 Progress: 6%|██▌ | ETA: 0:17:47 Progress: 6%|██▌ | ETA: 0:17:45 Progress: 6%|██▌ | ETA: 0:17:44 Progress: 6%|██▌ | ETA: 0:17:42 Progress: 6%|██▋ | ETA: 0:17:41 Progress: 6%|██▋ | ETA: 0:17:40 Progress: 6%|██▋ | ETA: 0:17:39 Progress: 7%|██▊ | ETA: 0:17:38 Progress: 7%|██▊ | ETA: 0:17:37 Progress: 7%|██▊ | ETA: 0:17:36 Progress: 7%|██▊ | ETA: 0:17:35 Progress: 7%|██▉ | ETA: 0:17:35 Progress: 7%|██▉ | ETA: 0:17:34 Progress: 7%|██▉ | ETA: 0:17:33 Progress: 7%|███ | ETA: 0:17:32 Progress: 7%|███ | ETA: 0:17:31 Progress: 7%|███ | ETA: 0:17:30 Progress: 7%|███ | ETA: 0:17:29 Progress: 8%|███▏ | ETA: 0:17:28 Progress: 8%|███▏ | ETA: 0:17:27 Progress: 8%|███▏ | ETA: 0:17:26 Progress: 8%|███▎ | ETA: 0:17:25 Progress: 8%|███▎ | ETA: 0:17:24 Progress: 8%|███▎ | ETA: 0:17:23 Progress: 8%|███▍ | ETA: 0:17:22 Progress: 8%|███▍ | ETA: 0:17:21 Progress: 8%|███▍ | ETA: 0:17:19 Progress: 8%|███▍ | ETA: 0:17:18 Progress: 8%|███▌ | ETA: 0:17:16 Progress: 9%|███▌ | ETA: 0:17:15 Progress: 9%|███▌ | ETA: 0:17:14 Progress: 9%|███▋ | ETA: 0:17:13 Progress: 9%|███▋ | ETA: 0:17:12 Progress: 9%|███▋ | ETA: 0:17:11 Progress: 9%|███▊ | ETA: 0:17:10 Progress: 9%|███▊ | ETA: 0:17:09 Progress: 9%|███▊ | ETA: 0:17:07 Progress: 9%|███▊ | ETA: 0:17:06 Progress: 9%|███▉ | ETA: 0:17:05 Progress: 9%|███▉ | ETA: 0:17:04 Progress: 10%|███▉ | ETA: 0:17:03 Progress: 10%|████ | ETA: 0:17:02 Progress: 10%|████ | ETA: 0:17:01 Progress: 10%|████ | ETA: 0:17:00 Progress: 10%|████ | ETA: 0:16:59 Progress: 10%|████▏ | ETA: 0:16:58 Progress: 10%|████▏ | ETA: 0:16:57 Progress: 10%|████▏ | ETA: 0:16:56 Progress: 10%|████▎ | ETA: 0:16:55 Progress: 100%|█████████████████████████████████████████| Time: 0:01:56 [ Info: Match target IDs to reference IDs Progress: 0%| | ETA: 21:20:49 Progress: 18%|███████▌ | ETA: 0:08:32 Progress: 37%|███████████████ | ETA: 0:03:21 Progress: 56%|███████████████████████ | ETA: 0:01:32 Progress: 75%|██████████████████████████████▉ | ETA: 0:00:38 Progress: 96%|███████████████████████████████████████▌ | ETA: 0:00:05 Progress: 100%|█████████████████████████████████████████| Time: 0:01:58 [ Info: 0 records are matched 246.498816 seconds (2.19 G allocations: 143.725 GiB, 6.39% gc time, 0.37% compilation time: <1% of which was recompilation) Test Summary: | Pass Total Time conformgt_by_id | 1649 1649 12m16.3s [ Info: Match target POS to reference POS Progress: 0%| | ETA: 21:54:14 Progress: 17%|███████ | ETA: 0:09:26 Progress: 35%|██████████████▌ | ETA: 0:03:36 Progress: 55%|██████████████████████▋ | ETA: 0:01:37 Progress: 75%|██████████████████████████████▊ | ETA: 0:00:40 Progress: 96%|███████████████████████████████████████▌ | ETA: 0:00:05 Progress: 100%|█████████████████████████████████████████| Time: 0:02:01 [ Info: 833 records are matched 132.764529 seconds (1.11 G allocations: 72.816 GiB, 5.14% gc time, 0.43% compilation time) [ Info: Match target POS to reference POS Progress: 0%| | ETA: 21:34:06 Progress: 18%|███████▌ | ETA: 0:08:32 Progress: 38%|███████████████▍ | ETA: 0:03:14 Progress: 58%|███████████████████████▊ | ETA: 0:01:26 Progress: 78%|███████████████████████████████▉ | ETA: 0:00:34 Progress: 99%|████████████████████████████████████████▊| ETA: 0:00:01 Progress: 100%|█████████████████████████████████████████| Time: 0:01:59 [ Info: 493 records are matched 130.928214 seconds (1.11 G allocations: 72.816 GiB, 5.13% gc time, 0.45% compilation time) [ Info: Match target POS to reference POS Progress: 0%| | ETA: 20:06:08 Progress: 20%|████████▎ | ETA: 0:07:12 Progress: 40%|████████████████▎ | ETA: 0:02:46 Progress: 62%|█████████████████████████▍ | ETA: 0:01:08 Progress: 84%|██████████████████████████████████▌ | ETA: 0:00:21 Progress: 100%|█████████████████████████████████████████| Time: 0:01:51 [ Info: 0 records are matched 122.716982 seconds (1.11 G allocations: 72.816 GiB, 5.40% gc time, 0.47% compilation time) Test Summary: | Pass Total Time conformgt_by_pos | 2502 2502 6m28.9s 1.137980 seconds (1.28 M allocations: 91.356 MiB, 4.07% gc time, 84.72% compilation time) 0.898916 seconds (1.16 M allocations: 86.629 MiB, 2.89% gc time, 80.85% compilation time) 0.897608 seconds (1.16 M allocations: 85.882 MiB, 1.94% gc time, 84.76% compilation time) 0.428262 seconds (203.62 k allocations: 11.567 MiB, 99.95% compilation time) 0.009998 seconds (6.18 k allocations: 483.492 KiB, 95.76% compilation time) 0.009699 seconds (2.65 k allocations: 247.555 KiB, 96.32% compilation time) Test Summary: | Pass Total Time convert_gt(vcfile) | 11 11 9.4s 0.937918 seconds (952.97 k allocations: 74.543 MiB, 3.31% gc time, 83.65% compilation time) 0.806887 seconds (860.72 k allocations: 71.557 MiB, 2.42% gc time, 82.82% compilation time) Test Summary: | Pass Total Time convert_ht(vcfile) | 6 6 6.4s Test Summary: | Pass Total Time convert_ds | 5 5 1.0s 0.129419 seconds (525.31 k allocations: 50.449 MiB, 10.90% gc time, 25.17% compilation time) 0.670409 seconds (647.53 k allocations: 57.715 MiB, 1.78% gc time, 87.61% compilation time) ┌ Warning: Reached end of reader; columns 1357-1400 are set to missing values └ @ VCFTools ~/.julia/packages/VCFTools/IWkMe/src/convert.jl:72 ┌ Warning: Reached end of reader; rows 1357-1400 are set to missing values └ @ VCFTools ~/.julia/packages/VCFTools/IWkMe/src/convert.jl:176 0.069788 seconds (520.43 k allocations: 51.916 MiB, 13.85% gc time) 0.537728 seconds (589.76 k allocations: 56.017 MiB, 1.97% gc time, 86.12% compilation time) ┌ Warning: Reached end of record! Columns 1357-1400 are filled with 0.0s and are NOT haplotypes! └ @ VCFTools ~/.julia/packages/VCFTools/IWkMe/src/convert.jl:414 ┌ Warning: Reached end of record! Rows 1357-1400 are filled with 0.0s and are NOT haplotypes! └ @ VCFTools ~/.julia/packages/VCFTools/IWkMe/src/convert.jl:501 0.515921 seconds (1.56 M allocations: 81.839 MiB, 84.13% gc time, 1.55% compilation time) 0.492183 seconds (1.70 M allocations: 90.371 MiB, 83.91% compilation time) ┌ Warning: Reached end of reader; columns 1357-1400 are set to missing values └ @ VCFTools ~/.julia/packages/VCFTools/IWkMe/src/convert.jl:672 ┌ Warning: Reached end of reader; rows 1357-1400 are set to missing values └ @ VCFTools ~/.julia/packages/VCFTools/IWkMe/src/convert.jl:787 Test Summary: | Pass Total Time convert to transpose functions | 13 13 6.5s Test Summary: | Pass Total Time record info | 14 14 3.5s Test Summary: | Pass Total Time write VCF | 3 3 3.1s 2.091758 seconds (5.25 M allocations: 378.596 MiB, 3.44% gc time, 56.84% compilation time) 0.975718 seconds (2.86 M allocations: 194.670 MiB, 3.13% gc time, 22.49% compilation time) 0.924501 seconds (4.89 M allocations: 358.250 MiB, 5.92% gc time) Test Summary: | Pass Total Time filter by sample/record index | 9 9 6.5s 0.992927 seconds (618.95 k allocations: 54.420 MiB, 1.34% gc time, 50.53% compilation time) Test Summary: | Pass Total Time mask_gt | 5 5 3.8s Test Summary: | Pass Total Time filter_chr | 4 4 1.6s Progress: 0%|▏ | ETA: 0:22:31 Progress: 1%|▍ | ETA: 0:20:06 Progress: 1%|▌ | ETA: 0:20:16 Progress: 2%|▊ | ETA: 0:20:19 Progress: 2%|▉ | ETA: 0:20:20 Progress: 2%|█ | ETA: 0:20:17 Progress: 3%|█▏ | ETA: 0:20:14 Progress: 3%|█▍ | ETA: 0:19:53 Progress: 4%|█▌ | ETA: 0:19:36 Progress: 4%|█▊ | ETA: 0:19:32 Progress: 5%|█▉ | ETA: 0:19:25 Progress: 5%|██▏ | ETA: 0:19:15 Progress: 6%|██▎ | ETA: 0:18:31 Progress: 6%|██▌ | ETA: 0:17:54 Progress: 7%|██▊ | ETA: 0:17:24 Progress: 7%|███ | ETA: 0:17:00 Progress: 8%|███▎ | ETA: 0:16:38 Progress: 9%|███▌ | ETA: 0:16:19 Progress: 9%|███▊ | ETA: 0:16:05 Progress: 10%|████ | ETA: 0:15:51 Progress: 10%|████▎ | ETA: 0:15:47 Progress: 11%|████▍ | ETA: 0:15:46 Progress: 11%|████▌ | ETA: 0:15:47 Progress: 12%|████▊ | ETA: 0:15:48 Progress: 12%|████▉ | ETA: 0:15:48 Progress: 12%|█████ | ETA: 0:15:49 Progress: 13%|█████▎ | ETA: 0:15:48 Progress: 13%|█████▍ | ETA: 0:15:48 Progress: 14%|█████▋ | ETA: 0:15:48 Progress: 14%|█████▊ | ETA: 0:15:46 Progress: 14%|█████▉ | ETA: 0:15:44 Progress: 15%|██████▏ | ETA: 0:15:42 Progress: 15%|██████▎ | ETA: 0:15:40 Progress: 16%|██████▍ | ETA: 0:15:39 Progress: 16%|██████▋ | ETA: 0:15:38 Progress: 16%|██████▊ | ETA: 0:15:37 Progress: 17%|██████▉ | ETA: 0:15:36 Progress: 17%|███████ | ETA: 0:15:34 Progress: 18%|███████▎ | ETA: 0:15:32 Progress: 18%|███████▍ | ETA: 0:15:31 Progress: 18%|███████▌ | ETA: 0:15:26 Progress: 19%|███████▊ | ETA: 0:15:24 Progress: 19%|███████▉ | ETA: 0:15:20 Progress: 20%|████████▏ | ETA: 0:15:15 Progress: 20%|████████▎ | ETA: 0:15:11 Progress: 21%|████████▌ | ETA: 0:15:08 Progress: 21%|████████▋ | ETA: 0:15:05 Progress: 21%|████████▊ | ETA: 0:15:00 Progress: 22%|█████████ | ETA: 0:14:56 Progress: 22%|█████████▏ | ETA: 0:14:54 Progress: 23%|█████████▎ | ETA: 0:14:50 Progress: 23%|█████████▌ | ETA: 0:14:46 Progress: 24%|█████████▋ | ETA: 0:14:42 Progress: 24%|█████████▊ | ETA: 0:14:38 Progress: 24%|██████████ | ETA: 0:14:34 Progress: 25%|██████████▏ | ETA: 0:14:30 Progress: 25%|██████████▎ | ETA: 0:14:27 Progress: 26%|██████████▌ | ETA: 0:14:22 Progress: 26%|██████████▋ | ETA: 0:14:19 Progress: 26%|██████████▉ | ETA: 0:14:15 Progress: 27%|███████████ | ETA: 0:14:11 Progress: 27%|███████████▏ | ETA: 0:14:08 Progress: 28%|███████████▎ | ETA: 0:14:04 Progress: 28%|███████████▌ | ETA: 0:14:00 Progress: 28%|███████████▋ | ETA: 0:13:56 Progress: 29%|███████████▉ | ETA: 0:13:52 Progress: 29%|████████████ | ETA: 0:13:46 Progress: 30%|████████████▎ | ETA: 0:13:38 Progress: 30%|████████████▌ | ETA: 0:13:27 Progress: 31%|████████████▋ | ETA: 0:13:17 Progress: 32%|████████████▉ | ETA: 0:13:06 Progress: 32%|█████████████▏ | ETA: 0:12:55 Progress: 33%|█████████████▍ | ETA: 0:12:46 Progress: 33%|█████████████▋ | ETA: 0:12:41 Progress: 34%|█████████████▉ | ETA: 0:12:36 Progress: 34%|██████████████ | ETA: 0:12:31 Progress: 35%|██████████████▏ | ETA: 0:12:26 Progress: 35%|██████████████▍ | ETA: 0:12:21 Progress: 35%|██████████████▌ | ETA: 0:12:17 Progress: 36%|██████████████▊ | ETA: 0:12:11 Progress: 36%|██████████████▉ | ETA: 0:12:07 Progress: 37%|███████████████▏ | ETA: 0:12:02 Progress: 37%|███████████████▎ | ETA: 0:11:59 Progress: 38%|███████████████▍ | ETA: 0:11:54 Progress: 38%|███████████████▋ | ETA: 0:11:47 Progress: 39%|███████████████▉ | ETA: 0:11:43 Progress: 39%|████████████████ | ETA: 0:11:39 Progress: 39%|████████████████▏ | ETA: 0:11:35 Progress: 40%|████████████████▍ | ETA: 0:11:29 Progress: 40%|████████████████▌ | ETA: 0:11:24 Progress: 41%|████████████████▊ | ETA: 0:11:20 Progress: 41%|████████████████▉ | ETA: 0:11:15 Progress: 42%|█████████████████ | ETA: 0:11:10 Progress: 42%|█████████████████▎ | ETA: 0:11:05 Progress: 42%|█████████████████▍ | ETA: 0:11:00 Progress: 43%|█████████████████▋ | ETA: 0:10:55 Progress: 43%|█████████████████▊ | ETA: 0:10:50 Progress: 44%|██████████████████ | ETA: 0:10:45 Progress: 44%|██████████████████▏ | ETA: 0:10:41 Progress: 45%|██████████████████▎ | ETA: 0:10:37 Progress: 45%|██████████████████▌ | ETA: 0:10:32 Progress: 45%|██████████████████▋ | ETA: 0:10:28 Progress: 46%|██████████████████▊ | ETA: 0:10:24 Progress: 46%|███████████████████ | ETA: 0:10:20 Progress: 47%|███████████████████▏ | ETA: 0:10:16 Progress: 47%|███████████████████▎ | ETA: 0:10:12 Progress: 47%|███████████████████▌ | ETA: 0:10:07 Progress: 48%|███████████████████▋ | ETA: 0:10:03 Progress: 48%|███████████████████▊ | ETA: 0:09:59 Progress: 49%|████████████████████ | ETA: 0:09:54 Progress: 49%|████████████████████▏ | ETA: 0:09:50 Progress: 50%|████████████████████▎ | ETA: 0:09:45 Progress: 50%|████████████████████▌ | ETA: 0:09:41 Progress: 50%|████████████████████▋ | ETA: 0:09:36 Progress: 51%|████████████████████▉ | ETA: 0:09:31 Progress: 51%|█████████████████████ | ETA: 0:09:27 Progress: 52%|█████████████████████▏ | ETA: 0:09:22 Progress: 52%|█████████████████████▍ | ETA: 0:09:18 Progress: 52%|█████████████████████▌ | ETA: 0:09:13 Progress: 53%|█████████████████████▋ | ETA: 0:09:09 Progress: 53%|█████████████████████▉ | ETA: 0:09:04 Progress: 54%|██████████████████████ | ETA: 0:09:00 Progress: 54%|██████████████████████▏ | ETA: 0:08:56 Progress: 54%|██████████████████████▍ | ETA: 0:08:51 Progress: 55%|██████████████████████▌ | ETA: 0:08:46 Progress: 55%|██████████████████████▋ | ETA: 0:08:42 Progress: 56%|██████████████████████▉ | ETA: 0:08:37 Progress: 56%|███████████████████████ | ETA: 0:08:33 Progress: 56%|███████████████████████▏ | ETA: 0:08:29 Progress: 57%|███████████████████████▍ | ETA: 0:08:25 Progress: 57%|███████████████████████▌ | ETA: 0:08:20 Progress: 58%|███████████████████████▋ | ETA: 0:08:16 Progress: 58%|███████████████████████▉ | ETA: 0:08:09 Progress: 59%|████████████████████████▏ | ETA: 0:08:01 Progress: 59%|████████████████████████▍ | ETA: 0:07:55 Progress: 60%|████████████████████████▌ | ETA: 0:07:50 Progress: 60%|████████████████████████▋ | ETA: 0:07:45 Progress: 61%|████████████████████████▉ | ETA: 0:07:40 Progress: 61%|█████████████████████████ | ETA: 0:07:35 Progress: 61%|█████████████████████████▎ | ETA: 0:07:30 Progress: 62%|█████████████████████████▍ | ETA: 0:07:25 Progress: 62%|█████████████████████████▌ | ETA: 0:07:20 Progress: 63%|█████████████████████████▊ | ETA: 0:07:15 Progress: 63%|█████████████████████████▉ | ETA: 0:07:10 Progress: 64%|██████████████████████████▏ | ETA: 0:07:06 Progress: 64%|██████████████████████████▎ | ETA: 0:07:01 Progress: 64%|██████████████████████████▍ | ETA: 0:06:56 Progress: 65%|██████████████████████████▋ | ETA: 0:06:52 Progress: 65%|██████████████████████████▊ | ETA: 0:06:47 Progress: 66%|██████████████████████████▉ | ETA: 0:06:42 Progress: 66%|███████████████████████████▏ | ETA: 0:06:38 Progress: 66%|███████████████████████████▎ | ETA: 0:06:33 Progress: 67%|███████████████████████████▍ | ETA: 0:06:28 Progress: 67%|███████████████████████████▋ | ETA: 0:06:23 Progress: 68%|███████████████████████████▊ | ETA: 0:06:18 Progress: 68%|████████████████████████████ | ETA: 0:06:14 Progress: 69%|████████████████████████████▏ | ETA: 0:06:09 Progress: 69%|████████████████████████████▎ | ETA: 0:06:04 Progress: 69%|████████████████████████████▌ | ETA: 0:06:00 Progress: 70%|████████████████████████████▋ | ETA: 0:05:55 Progress: 70%|████████████████████████████▊ | ETA: 0:05:50 Progress: 71%|████████████████████████████▉ | ETA: 0:05:46 Progress: 71%|█████████████████████████████▏ | ETA: 0:05:41 Progress: 71%|█████████████████████████████▎ | ETA: 0:05:36 Progress: 72%|█████████████████████████████▍ | ETA: 0:05:32 Progress: 72%|█████████████████████████████▋ | ETA: 0:05:27 Progress: 73%|█████████████████████████████▊ | ETA: 0:05:23 Progress: 73%|█████████████████████████████▉ | ETA: 0:05:18 Progress: 73%|██████████████████████████████▏ | ETA: 0:05:13 Progress: 74%|██████████████████████████████▎ | ETA: 0:05:09 Progress: 74%|██████████████████████████████▍ | ETA: 0:05:04 Progress: 75%|██████████████████████████████▋ | ETA: 0:04:59 Progress: 75%|██████████████████████████████▊ | ETA: 0:04:54 Progress: 75%|██████████████████████████████▉ | ETA: 0:04:49 Progress: 76%|███████████████████████████████▏ | ETA: 0:04:45 Progress: 76%|███████████████████████████████▎ | ETA: 0:04:40 Progress: 77%|███████████████████████████████▌ | ETA: 0:04:35 Progress: 77%|███████████████████████████████▋ | ETA: 0:04:30 Progress: 77%|███████████████████████████████▊ | ETA: 0:04:26 Progress: 78%|███████████████████████████████▉ | ETA: 0:04:21 Progress: 78%|████████████████████████████████▏ | ETA: 0:04:16 Progress: 79%|████████████████████████████████▎ | ETA: 0:04:11 Progress: 79%|████████████████████████████████▌ | ETA: 0:04:06 Progress: 80%|████████████████████████████████▋ | ETA: 0:04:01 Progress: 80%|████████████████████████████████▊ | ETA: 0:03:57 Progress: 80%|█████████████████████████████████ | ETA: 0:03:52 Progress: 81%|█████████████████████████████████▏ | ETA: 0:03:47 Progress: 81%|█████████████████████████████████▎ | ETA: 0:03:43 Progress: 82%|█████████████████████████████████▌ | ETA: 0:03:38 Progress: 82%|█████████████████████████████████▋ | ETA: 0:03:33 Progress: 82%|█████████████████████████████████▊ | ETA: 0:03:28 Progress: 83%|██████████████████████████████████ | ETA: 0:03:24 Progress: 83%|██████████████████████████████████▏ | ETA: 0:03:19 Progress: 84%|██████████████████████████████████▎ | ETA: 0:03:14 Progress: 84%|██████████████████████████████████▌ | ETA: 0:03:07 Progress: 85%|██████████████████████████████████▊ | ETA: 0:03:01 Progress: 85%|███████████████████████████████████ | ETA: 0:02:55 Progress: 86%|███████████████████████████████████▏ | ETA: 0:02:50 Progress: 86%|███████████████████████████████████▎ | ETA: 0:02:45 Progress: 86%|███████████████████████████████████▌ | ETA: 0:02:40 Progress: 87%|███████████████████████████████████▋ | ETA: 0:02:36 Progress: 87%|███████████████████████████████████▊ | ETA: 0:02:31 Progress: 88%|████████████████████████████████████ | ETA: 0:02:26 Progress: 88%|████████████████████████████████████▏ | ETA: 0:02:21 Progress: 88%|████████████████████████████████████▎ | ETA: 0:02:16 Progress: 89%|████████████████████████████████████▌ | ETA: 0:02:12 Progress: 89%|████████████████████████████████████▋ | ETA: 0:02:07 Progress: 90%|████████████████████████████████████▊ | ETA: 0:02:02 Progress: 90%|█████████████████████████████████████ | ETA: 0:01:57 Progress: 91%|█████████████████████████████████████▏ | ETA: 0:01:52 Progress: 91%|█████████████████████████████████████▎ | ETA: 0:01:47 Progress: 91%|█████████████████████████████████████▌ | ETA: 0:01:42 Progress: 92%|█████████████████████████████████████▋ | ETA: 0:01:38 Progress: 92%|█████████████████████████████████████▊ | ETA: 0:01:33 Progress: 93%|██████████████████████████████████████ | ETA: 0:01:28 Progress: 93%|██████████████████████████████████████▏ | ETA: 0:01:24 Progress: 93%|██████████████████████████████████████▎ | ETA: 0:01:19 Progress: 94%|██████████████████████████████████████▍ | ETA: 0:01:14 Progress: 94%|██████████████████████████████████████▋ | ETA: 0:01:10 Progress: 95%|██████████████████████████████████████▊ | ETA: 0:01:05 Progress: 95%|██████████████████████████████████████▉ | ETA: 0:01:00 Progress: 95%|███████████████████████████████████████▏ | ETA: 0:00:56 Progress: 96%|███████████████████████████████████████▎ | ETA: 0:00:51 Progress: 96%|███████████████████████████████████████▍ | ETA: 0:00:46 Progress: 97%|███████████████████████████████████████▋ | ETA: 0:00:41 Progress: 97%|███████████████████████████████████████▊ | ETA: 0:00:37 Progress: 97%|███████████████████████████████████████▉ | ETA: 0:00:32 Progress: 98%|████████████████████████████████████████▏| ETA: 0:00:27 Progress: 98%|████████████████████████████████████████▎| ETA: 0:00:22 Progress: 99%|████████████████████████████████████████▍| ETA: 0:00:17 Progress: 99%|████████████████████████████████████████▋| ETA: 0:00:11 Progress: 99%|████████████████████████████████████████▊| ETA: 0:00:06 Progress: 99%|█████████████████████████████████████████| ETA: 0:00:01 Progress: 100%|█████████████████████████████████████████| Time: 0:19:51 Test Summary: | Pass Total Time AIM selection | 4 4 20m39.2s Test Summary: | Pass Total Time grm | 11 11 9.5s Testing VCFTools tests passed Testing completed after 2573.36s PkgEval succeeded after 2642.84s