Package evaluation of SafetySignalDetection on Julia 1.13.0-DEV.897 (a39797a4fb*) started at 2025-07-25T02:00:23.134 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.47s ################################################################################ # Installation # Installing SafetySignalDetection... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [ad9a3248] + SafetySignalDetection v0.0.1 Updating `~/.julia/environments/v1.13/Manifest.toml` ⌅ [47edcb42] + ADTypes v0.2.7 [621f4979] + AbstractFFTs v1.5.0 [80f14c24] + AbstractMCMC v5.6.3 ⌅ [7a57a42e] + AbstractPPL v0.7.1 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 ⌅ [0bf59076] + AdvancedHMC v0.6.4 [5b7e9947] + AdvancedMH v0.8.8 ⌅ [576499cb] + AdvancedPS v0.5.4 ⌅ [b5ca4192] + AdvancedVI v0.2.12 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [4fba245c] + ArrayInterface v7.19.0 [a9b6321e] + Atomix v1.1.1 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.7 ⌅ [198e06fe] + BangBang v0.3.40 [9718e550] + Baselet v0.1.1 ⌅ [76274a88] + Bijectors v0.13.18 [082447d4] + ChainRules v1.72.5 [d360d2e6] + ChainRulesCore v1.25.2 [9e997f8a] + ChangesOfVariables v0.1.10 [861a8166] + Combinatorics v1.0.3 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.17.0 [a33af91c] + CompositionsBase v0.1.2 [88cd18e8] + ConsoleProgressMonitor v0.1.2 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.7.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [8bb1440f] + DelimitedFiles v1.9.1 [b429d917] + DensityInterface v0.4.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [31c24e10] + Distributions v0.25.120 [ced4e74d] + DistributionsAD v0.6.58 [ffbed154] + DocStringExtensions v0.9.5 ⌅ [366bfd00] + DynamicPPL v0.24.11 [cad2338a] + EllipticalSliceSampling v2.0.0 [4e289a0a] + EnumX v1.0.5 [e1fe09cc] + ExpectationMaximization v0.2.4 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [7a1cc6ca] + FFTW v1.9.0 [1a297f60] + FillArrays v1.13.0 ⌅ [f6369f11] + ForwardDiff v0.10.38 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 ⌅ [d9f16b24] + Functors v0.4.12 [46192b85] + GPUArraysCore v0.2.0 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [22cec73e] + InitialValues v0.3.1 [842dd82b] + InlineStrings v1.4.4 [505f98c9] + InplaceOps v0.3.0 [a98d9a8b] + Interpolations v0.16.1 [8197267c] + IntervalSets v0.7.11 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [ae98c720] + Jieko v0.2.1 [63c18a36] + KernelAbstractions v0.9.38 [5ab0869b] + KernelDensity v0.6.10 [8ac3fa9e] + LRUCache v1.6.2 [b964fa9f] + LaTeXStrings v1.4.0 [1d6d02ad] + LeftChildRightSiblingTrees v0.2.1 ⌅ [6f1fad26] + Libtask v0.8.8 [6fdf6af0] + LogDensityProblems v2.1.2 ⌃ [996a588d] + LogDensityProblemsAD v1.9.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.1.0 ⌅ [c7f686f2] + MCMCChains v6.0.7 [be115224] + MCMCDiagnosticTools v0.3.14 [e80e1ace] + MLJModelInterface v1.12.0 [1914dd2f] + MacroTools v0.5.16 [dbb5928d] + MappedArrays v0.4.2 ⌅ [128add7d] + MicroCollections v0.1.4 [e1d29d7a] + Missings v1.2.0 [2e0e35c7] + Moshi v0.3.7 [872c559c] + NNlib v0.9.31 [77ba4419] + NaNMath v1.1.3 [86f7a689] + NamedArrays v0.10.4 [c020b1a1] + NaturalSort v1.0.0 [6fe1bfb0] + OffsetArrays v1.17.0 [3bd65402] + Optimisers v0.4.6 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [33c8b6b6] + ProgressLogging v0.1.5 [92933f4c] + ProgressMeter v1.10.4 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [74087812] + Random123 v1.7.1 [e6cf234a] + RandomNumbers v1.6.0 [b3c3ace0] + RangeArrays v0.3.2 [c84ed2f1] + Ratios v0.4.5 [c1ae055f] + RealDot v0.1.0 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.35.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [f2b01f46] + Roots v2.2.8 [7e49a35a] + RuntimeGeneratedFunctions v0.5.15 [ad9a3248] + SafetySignalDetection v0.0.1 [0bca4576] + SciMLBase v2.104.0 [c0aeaf25] + SciMLOperators v1.3.1 [53ae85a6] + SciMLStructures v1.7.0 [30f210dd] + ScientificTypesBase v3.0.0 [7e506255] + ScopedValues v1.4.0 [91c51154] + SentinelArrays v1.4.8 [efcf1570] + Setfield v1.1.2 [ce78b400] + SimpleUnPack v1.1.0 [a2af1166] + SortingAlgorithms v1.2.1 [dc90abb0] + SparseInverseSubset v0.1.2 [276daf66] + SpecialFunctions v2.5.1 [171d559e] + SplittablesBase v0.1.15 [90137ffa] + StaticArrays v1.9.14 [1e83bf80] + StaticArraysCore v1.4.3 [64bff920] + StatisticalTraits v3.5.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.5 [4c63d2b9] + StatsFuns v1.5.0 [892a3eda] + StringManipulation v0.4.1 ⌃ [09ab397b] + StructArrays v0.6.21 [2efcf032] + SymbolicIndexingInterface v0.3.42 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [5d786b92] + TerminalLoggers v0.1.7 [9f7883ad] + Tracker v0.2.38 ⌃ [28d57a85] + Transducers v0.4.80 ⌅ [fce5fe82] + Turing v0.30.9 [013be700] + UnsafeAtomics v0.3.0 [efce3f68] + WoodburyMatrices v1.0.0 [700de1a5] + ZygoteRules v0.2.7 [f5851436] + FFTW_jll v3.3.11+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [856f044c] + MKL_jll v2025.2.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.14.1+1 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.7.15 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [efcefdf7] + PCRE2_jll v10.45.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 6.33s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 1379.01s ################################################################################ # Testing # Testing SafetySignalDetection Status `/tmp/jl_kBO438/Project.toml` [336ed68f] CSV v0.10.15 [a93c6f00] DataFrames v1.7.0 [31c24e10] Distributions v0.25.120 [ad9a3248] SafetySignalDetection v0.0.1 [860ef19b] StableRNGs v1.0.3 ⌅ [fce5fe82] Turing v0.30.9 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_kBO438/Manifest.toml` ⌅ [47edcb42] ADTypes v0.2.7 [621f4979] AbstractFFTs v1.5.0 [80f14c24] AbstractMCMC v5.6.3 ⌅ [7a57a42e] AbstractPPL v0.7.1 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 ⌅ [0bf59076] AdvancedHMC v0.6.4 [5b7e9947] AdvancedMH v0.8.8 ⌅ [576499cb] AdvancedPS v0.5.4 ⌅ [b5ca4192] AdvancedVI v0.2.12 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 [4fba245c] ArrayInterface v7.19.0 [a9b6321e] Atomix v1.1.1 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.7 ⌅ [198e06fe] BangBang v0.3.40 [9718e550] Baselet v0.1.1 ⌅ [76274a88] Bijectors v0.13.18 [336ed68f] CSV v0.10.15 [082447d4] ChainRules v1.72.5 [d360d2e6] ChainRulesCore v1.25.2 [9e997f8a] ChangesOfVariables v0.1.10 [944b1d66] CodecZlib v0.7.8 [861a8166] Combinatorics v1.0.3 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.17.0 [a33af91c] CompositionsBase v0.1.2 [88cd18e8] ConsoleProgressMonitor v0.1.2 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.7.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [244e2a9f] DefineSingletons v0.1.2 [8bb1440f] DelimitedFiles v1.9.1 [b429d917] DensityInterface v0.4.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [31c24e10] Distributions v0.25.120 [ced4e74d] DistributionsAD v0.6.58 [ffbed154] DocStringExtensions v0.9.5 ⌅ [366bfd00] DynamicPPL v0.24.11 [cad2338a] EllipticalSliceSampling v2.0.0 [4e289a0a] EnumX v1.0.5 [e1fe09cc] ExpectationMaximization v0.2.4 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [7a1cc6ca] FFTW v1.9.0 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.13.0 ⌅ [f6369f11] ForwardDiff v0.10.38 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 ⌅ [d9f16b24] Functors v0.4.12 [46192b85] GPUArraysCore v0.2.0 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [22cec73e] InitialValues v0.3.1 [842dd82b] InlineStrings v1.4.4 [505f98c9] InplaceOps v0.3.0 [a98d9a8b] Interpolations v0.16.1 [8197267c] IntervalSets v0.7.11 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.4 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [ae98c720] Jieko v0.2.1 [63c18a36] KernelAbstractions v0.9.38 [5ab0869b] KernelDensity v0.6.10 [8ac3fa9e] LRUCache v1.6.2 [b964fa9f] LaTeXStrings v1.4.0 [1d6d02ad] LeftChildRightSiblingTrees v0.2.1 ⌅ [6f1fad26] Libtask v0.8.8 [6fdf6af0] LogDensityProblems v2.1.2 ⌃ [996a588d] LogDensityProblemsAD v1.9.0 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.1.0 ⌅ [c7f686f2] MCMCChains v6.0.7 [be115224] MCMCDiagnosticTools v0.3.14 [e80e1ace] MLJModelInterface v1.12.0 [1914dd2f] MacroTools v0.5.16 [dbb5928d] MappedArrays v0.4.2 ⌅ [128add7d] MicroCollections v0.1.4 [e1d29d7a] Missings v1.2.0 [2e0e35c7] Moshi v0.3.7 [872c559c] NNlib v0.9.31 [77ba4419] NaNMath v1.1.3 [86f7a689] NamedArrays v0.10.4 [c020b1a1] NaturalSort v1.0.0 [6fe1bfb0] OffsetArrays v1.17.0 [3bd65402] Optimisers v0.4.6 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.35 [69de0a69] Parsers v2.8.3 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [33c8b6b6] ProgressLogging v0.1.5 [92933f4c] ProgressMeter v1.10.4 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [74087812] Random123 v1.7.1 [e6cf234a] RandomNumbers v1.6.0 [b3c3ace0] RangeArrays v0.3.2 [c84ed2f1] Ratios v0.4.5 [c1ae055f] RealDot v0.1.0 [3cdcf5f2] RecipesBase v1.3.4 [731186ca] RecursiveArrayTools v3.35.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.8.0 [f2b01f46] Roots v2.2.8 [7e49a35a] RuntimeGeneratedFunctions v0.5.15 [ad9a3248] SafetySignalDetection v0.0.1 [0bca4576] SciMLBase v2.104.0 [c0aeaf25] SciMLOperators v1.3.1 [53ae85a6] SciMLStructures v1.7.0 [30f210dd] ScientificTypesBase v3.0.0 [7e506255] ScopedValues v1.4.0 [91c51154] SentinelArrays v1.4.8 [efcf1570] Setfield v1.1.2 [ce78b400] SimpleUnPack v1.1.0 [a2af1166] SortingAlgorithms v1.2.1 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.5.1 [171d559e] SplittablesBase v0.1.15 [860ef19b] StableRNGs v1.0.3 [90137ffa] StaticArrays v1.9.14 [1e83bf80] StaticArraysCore v1.4.3 [64bff920] StatisticalTraits v3.5.0 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.5 [4c63d2b9] StatsFuns v1.5.0 [892a3eda] StringManipulation v0.4.1 ⌃ [09ab397b] StructArrays v0.6.21 [2efcf032] SymbolicIndexingInterface v0.3.42 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [5d786b92] TerminalLoggers v0.1.7 [9f7883ad] Tracker v0.2.38 [3bb67fe8] TranscodingStreams v0.11.3 ⌃ [28d57a85] Transducers v0.4.80 ⌅ [fce5fe82] Turing v0.30.9 [013be700] UnsafeAtomics v0.3.0 [ea10d353] WeakRefStrings v1.4.2 [efce3f68] WoodburyMatrices v1.0.0 [76eceee3] WorkerUtilities v1.6.1 [700de1a5] ZygoteRules v0.2.7 [f5851436] FFTW_jll v3.3.11+0 [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0 [856f044c] MKL_jll v2025.2.0+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [1317d2d5] oneTBB_jll v2022.0.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.14.1+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.7.15 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.1+0 [efcefdf7] PCRE2_jll v10.45.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling packages... 6104.7 ms ✓ BangBang → BangBangStaticArraysExt 3252.9 ms ✓ NamedArrays 12134.6 ms ✓ ChainRules 5852.5 ms ✓ AbstractMCMC 14055.7 ms ✓ RecursiveArrayTools → RecursiveArrayToolsKernelAbstractionsExt 3591.6 ms ✓ RecursiveArrayTools → RecursiveArrayToolsStructArraysExt 25728.7 ms ✓ SciMLBase 3825.2 ms ✓ NNlib → NNlibForwardDiffExt 4209.8 ms ✓ LogDensityProblemsAD → LogDensityProblemsADForwardDiffExt 3667.0 ms ✓ Interpolations → InterpolationsForwardDiffExt 4162.1 ms ✓ RecursiveArrayTools → RecursiveArrayToolsForwardDiffExt 6845.6 ms ✓ Distributions → DistributionsChainRulesCoreExt 5788.7 ms ✓ Distributions → DistributionsDensityInterfaceExt 7500.4 ms ✓ MCMCDiagnosticTools 2235.9 ms ✓ ArrayInterface → ArrayInterfaceChainRulesExt 32509.0 ms ✓ AdvancedHMC 5193.2 ms ✓ AbstractPPL 7999.1 ms ✓ EllipticalSliceSampling 8334.9 ms ✓ AdvancedPS 8366.6 ms ✓ AdvancedMH 5153.2 ms ✓ SciMLBase → SciMLBaseChainRulesCoreExt 40223.3 ms ✓ Tracker 8632.6 ms ✓ KernelDensity 12035.0 ms ✓ Bijectors 12628.8 ms ✓ DistributionsAD 7814.9 ms ✓ AdvancedPS → AdvancedPSLibtaskExt 7017.5 ms ✓ AdvancedMH → AdvancedMHStructArraysExt 7636.8 ms ✓ AdvancedMH → AdvancedMHForwardDiffExt 4872.0 ms ✓ Tracker → TrackerPDMatsExt 4330.5 ms ✓ ArrayInterface → ArrayInterfaceTrackerExt 6985.6 ms ✓ LogDensityProblemsAD → LogDensityProblemsADTrackerExt 53445.1 ms ✓ RecursiveArrayTools → RecursiveArrayToolsTrackerExt 38313.8 ms ? MCMCChains 7520.3 ms ✓ Bijectors → BijectorsForwardDiffExt 40351.7 ms ✓ Bijectors → BijectorsTrackerExt 38890.1 ms ✓ DynamicPPL 70528.6 ms ✓ DistributionsAD → DistributionsADTrackerExt 7078.0 ms ✓ DistributionsAD → DistributionsADForwardDiffExt 20275.9 ms ✓ Bijectors → BijectorsDistributionsADExt 29934.7 ms ✓ AdvancedHMC → AdvancedHMCMCMCChainsExt 10585.3 ms ✓ AdvancedMH → AdvancedMHMCMCChainsExt 37705.1 ms ✓ DynamicPPL → DynamicPPLForwardDiffExt 47184.4 ms ✓ DynamicPPL → DynamicPPLMCMCChainsExt 9116.0 ms ✓ DynamicPPL → DynamicPPLChainRulesCoreExt 10188.6 ms ✓ DynamicPPL → DynamicPPLZygoteRulesExt 99143.7 ms ✓ AdvancedVI Info Given Turing was explicitly requested, output will be shown live  WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. 317633.4 ms ✓ Turing 46 dependencies successfully precompiled in 1135 seconds. 230 already precompiled. 1 dependencies failed but may be precompilable after restarting julia 2 dependencies had output during precompilation: ┌ Turing │ [Output was shown above] └ ┌ MCMCChains │ WARNING: Method definition adapt_structure(Any, OffsetArrays.OffsetArray{T, N, AA} where AA<:AbstractArray{T, N} where N where T) in module OffsetArraysAdaptExt at /home/pkgeval/.julia/packages/OffsetArrays/b7qpm/ext/OffsetArraysAdaptExt.jl:9 overwritten in module OffsetArraysAdaptExt on the same line (check for duplicate calls to `include`). │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ Precompiling packages... 12496.4 ms ✓ BangBang → BangBangDataFramesExt 1 dependency successfully precompiled in 14 seconds. 43 already precompiled. Precompiling packages... 7822.3 ms ✓ Transducers → TransducersDataFramesExt 1 dependency successfully precompiled in 9 seconds. 56 already precompiled. Precompiling packages... 7336.0 ms ✓ ExpectationMaximization 28049.2 ms ✓ SafetySignalDetection 2 dependencies successfully precompiled in 42 seconds. 283 already precompiled. Sampling 0%| | ETA: N/A ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 351 running 1 of 1 signal (10): User defined signal 1 _ZNK4llvm5Value15getMetadataImplEj at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) unknown function (ip: 0x1c18aaf) at (unknown file) unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_54969.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2346 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007da7348d9d20 Total snapshots: 454. Utilization: 0% ╎454 @Base/task.jl:1129 wait_forever() 453╎ 454 @Base/task.jl:1192 wait() [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 [351] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/SafetySignalDetection/8uE1u/test/test_blinded_analysis.jl:1 unknown function (ip: 0x758b19cff59e) at /lib/x86_64-linux-gnu/libc.so.6 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 __libc_free at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) jfptr_wait_forever_54969.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2346 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 25345194 (Pool: 25344563; Big: 631); GC: 24 _ZN12_GLOBAL__N_114MachineCSEImpl9ExitScopeEPN4llvm17MachineBasicBlockE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN12_GLOBAL__N_114MachineCSEImpl10PerformCSEEPN4llvm15DomTreeNodeBaseINS1_17MachineBasicBlockEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN12_GLOBAL__N_114MachineCSEImpl3runERN4llvm15MachineFunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN12_GLOBAL__N_116MachineCSELegacy20runOnMachineFunctionERN4llvm15MachineFunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm19MachineFunctionPass13runOnFunctionERNS_8FunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm13FPPassManager13runOnFunctionERNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm13FPPassManager11runOnModuleERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm6legacy15PassManagerImpl3runERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm3orc14SimpleCompilerclERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) operator() at /source/src/jitlayers.cpp:1613 addModule at /source/src/jitlayers.cpp:2094 jl_compile_codeinst_now at /source/src/jitlayers.cpp:685 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:876 jl_compile_method_internal at /source/src/gf.c:3527 _jl_invoke at /source/src/gf.c:4007 [inlined] ijl_apply_generic at /source/src/gf.c:4212 inferiterate at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:1702 jfptr_inferiterate_80541.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 doworkloop at ./../usr/share/julia/Compiler/src/inferencestate.jl:1205 jfptr_doworkloop_84931.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 typeinf at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4460 typeinf_ext at ./../usr/share/julia/Compiler/src/typeinfer.jl:1378 typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1561 [inlined] typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1570 jfptr_typeinf_ext_toplevel_85761.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2346 [inlined] jl_type_infer at /source/src/gf.c:462 jl_compile_method_internal at /source/src/gf.c:3514 _jl_invoke at /source/src/gf.c:4007 [inlined] ijl_apply_generic at /source/src/gf.c:4212 #handle_message#6 at ./logging/ConsoleLogger.jl:162 handle_message at ./logging/ConsoleLogger.jl:110 [inlined] #handle_message#4 at /home/pkgeval/.julia/packages/LoggingExtras/cFgEq/src/CompositionalLoggers/earlyfiltered.jl:26 [inlined] handle_message at /home/pkgeval/.julia/packages/LoggingExtras/cFgEq/src/CompositionalLoggers/earlyfiltered.jl:24 unknown function (ip: 0x758aeb357215) at (unknown file) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2346 [inlined] jl_f__apply_iterate at /source/src/builtins.c:864 #handle_message#6 at /home/pkgeval/.julia/packages/LoggingExtras/cFgEq/src/CompositionalLoggers/tee.jl:24 handle_message at /home/pkgeval/.julia/packages/LoggingExtras/cFgEq/src/CompositionalLoggers/tee.jl:21 unknown function (ip: 0x758aeb355f4f) at (unknown file) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2346 [inlined] jl_f_invoke_in_world at /source/src/builtins.c:896 #invokelatest_gr#235 at ./reflection.jl:0 [inlined] invokelatest_gr at ./reflection.jl:1325 [inlined] #handle_message_nothrow#2 at ./logging/logging.jl:432 handle_message_nothrow at ./logging/logging.jl:429 macro expansion at ./logging/logging.jl:417 [inlined] #initialstep#28 at /home/pkgeval/.julia/packages/Turing/hbbFY/src/mcmc/hmc.jl:191 initialstep at /home/pkgeval/.julia/packages/Turing/hbbFY/src/mcmc/hmc.jl:130 unknown function (ip: 0x758aeb31f979) at (unknown file) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 #step#45 at /home/pkgeval/.julia/packages/DynamicPPL/rXg4T/src/sampler.jl:116 step at /home/pkgeval/.julia/packages/DynamicPPL/rXg4T/src/sampler.jl:99 [inlined] macro expansion at /home/pkgeval/.julia/packages/AbstractMCMC/F50rb/src/sample.jl:161 [inlined] macro expansion at /home/pkgeval/.julia/packages/ProgressLogging/EktJo/src/ProgressLogging.jl:328 [inlined] #25 at /home/pkgeval/.julia/packages/AbstractMCMC/F50rb/src/logging.jl:12 with_logstate at ./logging/logging.jl:540 unknown function (ip: 0x758b189bd93f) at (unknown file) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 with_logger at ./logging/logging.jl:651 with_progresslogger at /home/pkgeval/.julia/packages/AbstractMCMC/F50rb/src/logging.jl:36 unknown function (ip: 0x758b189bc86e) at (unknown file) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 macro expansion at /home/pkgeval/.julia/packages/AbstractMCMC/F50rb/src/logging.jl:11 [inlined] #mcmcsample#23 at /home/pkgeval/.julia/packages/AbstractMCMC/F50rb/src/sample.jl:144 mcmcsample at /home/pkgeval/.julia/packages/AbstractMCMC/F50rb/src/sample.jl:109 unknown function (ip: 0x758b189acf0f) at (unknown file) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 #sample#27 at /home/pkgeval/.julia/packages/Turing/hbbFY/src/mcmc/hmc.jl:117 sample at /home/pkgeval/.julia/packages/Turing/hbbFY/src/mcmc/hmc.jl:86 [inlined] #sample#3 at /home/pkgeval/.julia/packages/Turing/hbbFY/src/mcmc/Inference.jl:219 [inlined] sample at /home/pkgeval/.julia/packages/Turing/hbbFY/src/mcmc/Inference.jl:212 unknown function (ip: 0x758b1898bafc) at (unknown file) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2346 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_body at /source/src/interpreter.c:581 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 _include at ./loading.jl:2908 include at ./Base.jl:312 IncludeInto at ./Base.jl:313 jfptr_IncludeInto_67279.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2346 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 _include at ./loading.jl:2908 include at ./Base.jl:312 IncludeInto at ./Base.jl:313 jfptr_IncludeInto_67279.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2346 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 exec_options at ./client.jl:286 _start at ./client.jl:553 jfptr__start_66188.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2346 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x758b19c90249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) Allocations: 79926291 (Pool: 79925235; Big: 1056); GC: 119 PkgEval terminated after 2723.1s: test duration exceeded the time limit