Package evaluation of ProtPlot on Julia 1.13.0-DEV.897 (a39797a4fb*) started at 2025-07-25T05:07:06.914 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.84s ################################################################################ # Installation # Installing ProtPlot... Resolving package versions... Installed HarfBuzz_jll ──────────────── v8.5.1+0 Installed libass_jll ────────────────── v0.17.4+0 Installed libaom_jll ────────────────── v3.12.1+0 Installed Libuuid_jll ───────────────── v2.41.0+0 Installed ImageIO ───────────────────── v0.6.9 Installed MosaicViews ───────────────── v0.3.4 Installed InlineStrings ─────────────── v1.4.4 Installed PolygonOps ────────────────── v0.1.2 Installed Bzip2_jll ─────────────────── v1.0.9+0 Installed Libtiff_jll ───────────────── v4.7.1+0 Installed MKL_jll ───────────────────── v2025.2.0+0 Installed Cairo_jll ─────────────────── v1.18.5+0 Installed Extents ───────────────────── v0.1.6 Installed OrderedCollections ────────── v1.8.1 Installed NearestNeighbors ──────────── v0.4.22 Installed Backboner ─────────────────── v0.12.2 Installed Graphite2_jll ─────────────── v1.3.15+0 Installed Giflib_jll ────────────────── v5.2.3+0 Installed Fontconfig_jll ────────────── v2.16.0+0 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed Distances ─────────────────── v0.10.12 Installed QuadGK ────────────────────── v2.11.2 Installed FileIO ────────────────────── v1.17.0 Installed AdaptivePredicates ────────── v1.2.0 Installed Opus_jll ──────────────────── v1.5.2+0 Installed HDF5_jll ──────────────────── v1.14.6+0 Installed ScopedValues ──────────────── v1.4.0 Installed Ogg_jll ───────────────────── v1.3.6+0 Installed WoodburyMatrices ──────────── v1.0.0 Installed Tables ────────────────────── v1.12.1 Installed EnumX ─────────────────────── v1.0.5 Installed Xorg_libxcb_jll ───────────── v1.17.1+0 Installed LZO_jll ───────────────────── v2.10.3+0 Installed Reexport ──────────────────── v1.2.2 Installed InverseFunctions ──────────── v0.1.17 Installed Missings ──────────────────── v1.2.0 Installed LERC_jll ──────────────────── v4.0.1+0 Installed Preferences ───────────────── v1.4.3 Installed ProteinChains ─────────────── v0.7.3 Installed TableTraits ───────────────── v1.0.1 Installed Imath_jll ─────────────────── v3.1.11+0 Installed LLVMOpenMP_jll ────────────── v18.1.8+0 Installed MappedArrays ──────────────── v0.4.2 Installed LaTeXStrings ──────────────── v1.4.0 Installed SortingAlgorithms ─────────── v1.2.1 Installed DynamicStructs ────────────── v0.2.3 Installed Grisu ─────────────────────── v1.0.2 Installed RangeArrays ───────────────── v0.3.2 Installed CRlibm ────────────────────── v1.0.2 Installed Format ────────────────────── v1.3.7 Installed Inflate ───────────────────── v0.1.5 Installed ColorBrewer ───────────────── v0.4.1 Installed MacroTools ────────────────── v0.5.16 Installed Packing ───────────────────── v0.5.1 Installed OpenEXR_jll ───────────────── v3.2.4+0 Installed LazyModules ───────────────── v0.3.1 Installed AbstractTrees ─────────────── v0.4.5 Installed FillArrays ────────────────── v1.13.0 Installed Quaternions ───────────────── v0.7.6 Installed DataStructures ────────────── v0.18.22 Installed libaec_jll ────────────────── v1.1.3+0 Installed MakieCore ─────────────────── v0.9.5 Installed oneTBB_jll ────────────────── v2022.0.0+0 Installed ArnoldiMethod ─────────────── v0.4.0 Installed UnicodeFun ────────────────── v0.4.1 Installed MathTeXEngine ─────────────── v0.6.5 Installed StatsBase ─────────────────── v0.34.5 Installed x264_jll ──────────────────── v10164.0.1+0 Installed Xorg_libXau_jll ───────────── v1.0.13+0 Installed DataValueInterfaces ───────── v1.0.0 Installed CodecZlib ─────────────────── v0.7.8 Installed IntelOpenMP_jll ───────────── v2025.2.0+0 Installed Observables ───────────────── v0.5.5 Installed CEnum ─────────────────────── v0.5.0 Installed ProtPlot ──────────────────── v0.5.10 Installed Libffi_jll ────────────────── v3.4.7+0 Installed Expat_jll ─────────────────── v2.6.5+0 Installed Pixman_jll ────────────────── v0.44.2+0 Installed IrrationalConstants ───────── v0.2.4 Installed GPUArraysCore ─────────────── v0.2.0 Installed RealDot ───────────────────── v0.1.0 Installed libpng_jll ────────────────── v1.6.50+0 Installed Contour ───────────────────── v0.6.3 Installed isoband_jll ───────────────── v0.2.3+0 Installed ColorVectorSpace ──────────── v0.11.0 Installed SimpleTraits ──────────────── v0.9.4 Installed RoundingEmulator ──────────── v0.2.1 Installed ImageMetadata ─────────────── v0.9.10 Installed StableRNGs ────────────────── v1.0.3 Installed OpenMPI_jll ───────────────── v5.0.8+0 Installed Hwloc_jll ─────────────────── v2.12.1+0 Installed Interpolations ────────────── v0.15.1 Installed BitIntegers ───────────────── v0.3.5 Installed libfdk_aac_jll ────────────── v2.0.4+0 Installed Dierckx_jll ───────────────── v0.2.0+0 Installed libsixel_jll ──────────────── v1.10.5+0 Installed libwebp_jll ───────────────── v1.6.0+0 Installed Scratch ───────────────────── v1.3.0 Installed FFMPEG_jll ────────────────── v6.1.3+0 Installed ShaderAbstractions ────────── v0.5.0 Installed CRlibm_jll ────────────────── v1.0.1+0 Installed PDMats ────────────────────── v0.11.35 Installed AxisArrays ────────────────── v0.4.7 Installed DocStringExtensions ───────── v0.9.5 Installed ImageCore ─────────────────── v0.10.5 Installed PNGFiles ──────────────────── v0.4.4 Installed JpegTurbo ─────────────────── v0.1.6 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed OpenBLASConsistentFPCSR_jll ─ v0.3.29+0 Installed PkgVersion ────────────────── v0.3.3 Installed FreeType ──────────────────── v4.1.1 Installed StackViews ────────────────── v0.1.2 Installed RelocatableFolders ────────── v1.0.1 Installed KernelDensity ─────────────── v0.6.10 Installed MPICH_jll ─────────────────── v4.3.1+0 Installed MicrosoftMPI_jll ──────────── v10.1.4+3 Installed AliasTables ───────────────── v1.1.3 Installed HashArrayMappedTries ──────── v0.2.0 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed SIMD ──────────────────────── v3.7.1 Installed RecipesBase ───────────────── v1.3.4 Installed DataAPI ───────────────────── v1.16.0 Installed Netpbm ────────────────────── v1.1.1 Installed NNlib ─────────────────────── v0.9.31 Installed StaticArraysCore ──────────── v1.4.3 Installed ImageAxes ─────────────────── v0.6.12 Installed AbstractFFTs ──────────────── v1.5.0 Installed StaticArrays ──────────────── v1.9.14 Installed Colors ────────────────────── v0.13.1 Installed Libglvnd_jll ──────────────── v1.7.1+1 Installed AxisAlgorithms ────────────── v1.1.0 Installed Glib_jll ──────────────────── v2.84.3+0 Installed QOI ───────────────────────── v1.0.1 Installed ColorTypes ────────────────── v0.12.1 Installed Requires ──────────────────── v1.3.1 Installed BaseDirs ──────────────────── v1.3.2 Installed LogExpFunctions ───────────── v0.3.29 Installed Rmath ─────────────────────── v0.8.0 Installed Parsers ───────────────────── v2.8.3 Installed JSON ──────────────────────── v0.21.4 Installed FreeTypeAbstraction ───────── v0.10.8 Installed Distributions ─────────────── v0.25.120 Installed FilePaths ─────────────────── v0.8.3 Installed UnsafeAtomics ─────────────── v0.3.0 Installed StatsFuns ─────────────────── v1.5.0 Installed GridLayoutBase ────────────── v0.11.1 Installed Unitful ───────────────────── v1.23.1 Installed Xorg_libXdmcp_jll ─────────── v1.1.6+0 Installed SignedDistanceFields ──────── v0.4.0 Installed OpenEXR ───────────────────── v0.3.3 Installed JLLWrappers ───────────────── v1.7.1 Installed XZ_jll ────────────────────── v5.8.1+0 Installed GeometryBasics ────────────── v0.5.10 Installed BioGenerics ───────────────── v0.1.5 Installed x265_jll ──────────────────── v4.1.0+0 Installed ExactPredicates ───────────── v2.2.8 Installed IterTools ─────────────────── v1.10.0 Installed Xorg_xtrans_jll ───────────── v1.6.0+0 Installed Graphs ────────────────────── v1.13.0 Installed TiffImages ────────────────── v0.11.4 Installed FilePathsBase ─────────────── v0.9.24 Installed Dierckx ───────────────────── v0.5.4 Installed JpegTurbo_jll ─────────────── v3.1.1+0 Installed PaddedViews ───────────────── v0.5.12 Installed Adapt ─────────────────────── v4.3.0 Installed JLD2 ──────────────────────── v0.5.15 Installed BioStructures ─────────────── v4.6.0 Installed ConstructionBase ──────────── v1.6.0 Installed ColorSchemes ──────────────── v3.30.0 Installed HypergeometricFunctions ───── v0.3.28 Installed Libmount_jll ──────────────── v2.41.0+0 Installed PeriodicTable ─────────────── v1.2.1 Installed TriplotBase ───────────────── v0.1.0 Installed Sixel ─────────────────────── v0.1.5 Installed Compat ────────────────────── v4.17.0 Installed TranscodingStreams ────────── v0.11.3 Installed Xorg_libX11_jll ───────────── v1.8.12+0 Installed PlotUtils ─────────────────── v1.4.3 Installed TensorCore ────────────────── v0.1.1 Installed EarCut_jll ────────────────── v2.2.4+0 Installed Statistics ────────────────── v1.11.1 Installed ImageBase ─────────────────── v0.1.7 Installed PrecompileTools ───────────── v1.3.2 Installed Atomix ────────────────────── v1.1.1 Installed StatsAPI ──────────────────── v1.7.1 Installed StructArrays ──────────────── v0.7.1 Installed OffsetArrays ──────────────── v1.17.0 Installed ProgressMeter ─────────────── v1.10.4 Installed WebP ──────────────────────── v0.1.3 Installed BioSymbols ────────────────── v5.2.0 Installed Ratios ────────────────────── v0.4.5 Installed GettextRuntime_jll ────────── v0.22.4+0 Installed FriBidi_jll ───────────────── v1.0.17+0 Installed ChainRulesCore ────────────── v1.25.2 Installed Animations ────────────────── v0.4.2 Installed LAME_jll ──────────────────── v3.100.3+0 Installed Xorg_libXrender_jll ───────── v0.9.12+0 Installed KernelAbstractions ────────── v0.9.38 Installed Isoband ───────────────────── v0.1.1 Installed libvorbis_jll ─────────────── v1.3.8+0 Installed AssigningSecondaryStructure ─ v0.5.1 Installed PtrArrays ─────────────────── v1.3.0 Installed IntervalArithmetic ────────── v0.22.36 Installed SpecialFunctions ──────────── v2.5.1 Installed FixedPointNumbers ─────────── v0.8.5 Installed IntervalSets ──────────────── v0.7.11 Installed Showoff ───────────────────── v1.0.3 Installed MPIPreferences ────────────── v0.1.11 Installed FreeType2_jll ─────────────── v2.13.4+0 Installed FFTW_jll ──────────────────── v3.3.11+0 Installed Makie ─────────────────────── v0.22.10 Installed Rotations ─────────────────── v1.7.1 Installed FFTW ──────────────────────── v1.9.0 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed Xorg_libXext_jll ──────────── v1.3.7+0 Installed IndirectArrays ────────────── v1.0.0 Installed MPItrampoline_jll ─────────── v5.5.4+0 Installed Automa ────────────────────── v1.1.0 Installed HDF5 ──────────────────────── v0.17.2 Installed DelaunayTriangulation ─────── v1.6.4 Installing 58 artifacts Installed artifact libaec 96.2 KiB Installed artifact Giflib 154.6 KiB Installed artifact libvorbis 271.0 KiB Installed artifact Ogg 250.3 KiB Installed artifact oneTBB 435.6 KiB Installed artifact Pixman 372.2 KiB Installed artifact FriBidi 78.9 KiB Installed artifact libass 427.8 KiB Installed artifact Libiconv 1.9 MiB Installed artifact EarCut 80.5 KiB Installed artifact Expat 271.4 KiB Installed artifact Rmath 121.9 KiB Installed artifact libfdk_aac 2.8 MiB Installed artifact LAME 292.5 KiB Installed artifact HDF5 5.7 MiB Installed artifact MPICH 3.3 MiB Installed artifact XZ 1.5 MiB Installed artifact isoband 25.7 KiB Installed artifact Libffi 44.2 KiB Installed artifact Xorg_libXdmcp 67.7 KiB Installed artifact Dierckx 149.2 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact x264 2.1 MiB Installed artifact Libglvnd 833.5 KiB Installed artifact FFTW 2.2 MiB Installed artifact GettextRuntime 543.0 KiB Installed artifact OpenEXR 1.9 MiB Installed artifact HarfBuzz 1.7 MiB Installed artifact x265 1.4 MiB Installed artifact Xorg_libxcb 2.1 MiB Installed artifact FFMPEG 11.0 MiB Installed artifact libaom 6.4 MiB Installed artifact Xorg_libXext 699.9 KiB Installed artifact libpng 328.4 KiB Installed artifact Bzip2 503.5 KiB Installed artifact JpegTurbo 1.6 MiB Installed artifact Imath 182.8 KiB Installed artifact libsixel 177.3 KiB Installed artifact LLVMOpenMP 661.6 KiB Installed artifact Libtiff 3.2 MiB Installed artifact Fontconfig 522.5 KiB Installed artifact LZO 208.9 KiB Installed artifact FreeType2 1.5 MiB Installed artifact CRlibm 169.5 KiB Installed artifact Xorg_xtrans 48.2 KiB Installed artifact Xorg_libXrender 435.9 KiB Installed artifact Libuuid 3.5 MiB Installed artifact Xorg_libXau 36.6 KiB Installed artifact Graphite2 120.2 KiB Installed artifact LERC 272.9 KiB Installed artifact Opus 925.5 KiB Installed artifact Hwloc 3.5 MiB Installed artifact libwebp 2.6 MiB Installed artifact Cairo 2.2 MiB Installed artifact OpenBLASConsistentFPCSR 9.9 MiB Installed artifact Libmount 6.4 MiB Installed artifact Glib 7.7 MiB Installed artifact Xorg_libX11 13.9 MiB Updating `~/.julia/environments/v1.13/Project.toml` [77b3afcc] + ProtPlot v0.5.10 Updating `~/.julia/environments/v1.13/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] + Adapt v4.3.0 [35492f91] + AdaptivePredicates v1.2.0 [66dad0bd] + AliasTables v1.1.3 [27a7e980] + Animations v0.4.2 [ec485272] + ArnoldiMethod v0.4.0 [8ed43e74] + AssigningSecondaryStructure v0.5.1 [a9b6321e] + Atomix v1.1.1 [67c07d97] + Automa v1.1.0 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.7 [9ac9c2a2] + Backboner v0.12.2 [18cc8868] + BaseDirs v1.3.2 [47718e42] + BioGenerics v0.1.5 [de9282ab] + BioStructures v4.6.0 [3c28c6f8] + BioSymbols v5.2.0 [c3b6d118] + BitIntegers v0.3.5 [fa961155] + CEnum v0.5.0 [96374032] + CRlibm v1.0.2 [d360d2e6] + ChainRulesCore v1.25.2 [944b1d66] + CodecZlib v0.7.8 [a2cac450] + ColorBrewer v0.4.1 [35d6a980] + ColorSchemes v3.30.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [34da2185] + Compat v4.17.0 [187b0558] + ConstructionBase v1.6.0 [d38c429a] + Contour v0.6.3 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [927a84f5] + DelaunayTriangulation v1.6.4 [39dd38d3] + Dierckx v0.5.4 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [e139c391] + DynamicStructs v0.2.3 [4e289a0a] + EnumX v1.0.5 [429591f6] + ExactPredicates v2.2.8 [411431e0] + Extents v0.1.6 [7a1cc6ca] + FFTW v1.9.0 [5789e2e9] + FileIO v1.17.0 ⌅ [8fc22ac5] + FilePaths v0.8.3 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.13.0 [53c48c17] + FixedPointNumbers v0.8.5 [1fa38f19] + Format v1.3.7 [b38be410] + FreeType v4.1.1 [663a7486] + FreeTypeAbstraction v0.10.8 [46192b85] + GPUArraysCore v0.2.0 [5c1252a2] + GeometryBasics v0.5.10 [86223c79] + Graphs v1.13.0 [3955a311] + GridLayoutBase v0.11.1 [42e2da0e] + Grisu v1.0.2 [f67ccb44] + HDF5 v0.17.2 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [2803e5a7] + ImageAxes v0.6.12 [c817782e] + ImageBase v0.1.7 [a09fc81d] + ImageCore v0.10.5 [82e4d734] + ImageIO v0.6.9 [bc367c6b] + ImageMetadata v0.9.10 [9b13fd28] + IndirectArrays v1.0.0 [d25df0c9] + Inflate v0.1.5 [842dd82b] + InlineStrings v1.4.4 ⌅ [a98d9a8b] + Interpolations v0.15.1 [d1acc4aa] + IntervalArithmetic v0.22.36 [8197267c] + IntervalSets v0.7.11 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [f1662d9f] + Isoband v0.1.1 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [033835bb] + JLD2 v0.5.15 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v0.21.4 [b835a17e] + JpegTurbo v0.1.6 [63c18a36] + KernelAbstractions v0.9.38 [5ab0869b] + KernelDensity v0.6.10 [b964fa9f] + LaTeXStrings v1.4.0 [8cdb02fc] + LazyModules v0.3.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 ⌅ [ee78f7c6] + Makie v0.22.10 ⌅ [20f20a25] + MakieCore v0.9.5 [dbb5928d] + MappedArrays v0.4.2 [0a4f8689] + MathTeXEngine v0.6.5 [e1d29d7a] + Missings v1.2.0 [e94cdb99] + MosaicViews v0.3.4 [872c559c] + NNlib v0.9.31 [b8a86587] + NearestNeighbors v0.4.22 [f09324ee] + Netpbm v1.1.1 [510215fc] + Observables v0.5.5 [6fe1bfb0] + OffsetArrays v1.17.0 [52e1d378] + OpenEXR v0.3.3 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [f57f5aa1] + PNGFiles v0.4.4 [19eb6ba3] + Packing v0.5.1 [5432bcbf] + PaddedViews v0.5.12 [69de0a69] + Parsers v2.8.3 [7b2266bf] + PeriodicTable v1.2.1 [eebad327] + PkgVersion v0.3.3 [995b91a9] + PlotUtils v1.4.3 [647866c9] + PolygonOps v0.1.2 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [92933f4c] + ProgressMeter v1.10.4 [77b3afcc] + ProtPlot v0.5.10 [b8e8f2a5] + ProteinChains v0.7.3 [43287f4e] + PtrArrays v1.3.0 [4b34888f] + QOI v1.0.1 [1fd47b50] + QuadGK v2.11.2 [94ee1d12] + Quaternions v0.7.6 [b3c3ace0] + RangeArrays v0.3.2 [c84ed2f1] + Ratios v0.4.5 [c1ae055f] + RealDot v0.1.0 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [05181044] + RelocatableFolders v1.0.1 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [6038ab10] + Rotations v1.7.1 [5eaf0fd0] + 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[1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.14.1+1 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.7.15 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [efcefdf7] + PCRE2_jll v10.45.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 33.91s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4799.6 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 26 already precompiled. Precompiling package dependencies... ERROR: LoadError: The following 1 direct dependency failed to precompile: GLMakie Failed to precompile GLMakie [e9467ef8-e4e7-5192-8a1a-b1aee30e663a] to "/home/pkgeval/.julia/compiled/v1.13/GLMakie/jl_Yxp6qO" (ProcessExited(1)). ┌ Warning: GLFW couldn't create an OpenGL window. │ This likely means, you don't have an OpenGL capable Graphic Card, │ or you don't have an OpenGL 3.3 capable video driver installed. │ Have a look at the troubleshooting section in the GLMakie readme: │ https://github.com/MakieOrg/Makie.jl/tree/master/GLMakie#troubleshooting-opengl. └ @ GLMakie ~/.julia/packages/GLMakie/1dQSN/src/screen.jl:291 ERROR: LoadError: GLFWError (API_UNAVAILABLE): GLX: No GLXFBConfigs returned Stacktrace: [1] _ErrorCallbackWrapper(code::Int32, description::Cstring) @ GLFW ~/.julia/packages/GLFW/a10jC/src/callback.jl:46 [2] CreateWindow(width::Int64, height::Int64, title::String, monitor::GLFW.Monitor, share::GLFW.Window) @ GLFW ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:580 [3] GLFW.Window(; name::String, resolution::Tuple{Int64, Int64}, debugging::Bool, major::Int64, minor::Int64, windowhints::Vector{Tuple{UInt32, Integer}}, contexthints::Vector{Tuple{UInt32, Integer}}, visible::Bool, focus::Bool, fullscreen::Bool, monitor::Nothing, share::GLFW.Window) @ GLFW ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:404 [4] Window @ ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:362 [inlined] [5] empty_screen(debugging::Bool, reuse::Bool, window::Nothing) @ GLMakie ~/.julia/packages/GLMakie/1dQSN/src/screen.jl:282 [6] empty_screen(debugging::Bool; reuse::Bool, window::Nothing) @ GLMakie ~/.julia/packages/GLMakie/1dQSN/src/screen.jl:256 [7] singleton_screen(debugging::Bool) @ GLMakie ~/.julia/packages/GLMakie/1dQSN/src/screen.jl:391 [8] macro expansion @ ~/.julia/packages/GLMakie/1dQSN/src/precompiles.jl:21 [inlined] [9] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [10] macro expansion @ ~/.julia/packages/GLMakie/1dQSN/src/precompiles.jl:18 [inlined] [11] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] [12] top-level scope @ ~/.julia/packages/GLMakie/1dQSN/src/precompiles.jl:16 [13] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [14] top-level scope @ ~/.julia/packages/GLMakie/1dQSN/src/GLMakie.jl:100 [15] include(mod::Module, _path::String) @ Base ./Base.jl:311 [16] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3002 [17] top-level scope @ stdin:5 [18] eval(m::Module, e::Any) @ Core ./boot.jl:489 [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [20] include_string @ ./loading.jl:2858 [inlined] [21] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [22] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/GLMakie/1dQSN/src/precompiles.jl:15 in expression starting at /home/pkgeval/.julia/packages/GLMakie/1dQSN/src/GLMakie.jl:1 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 1501.75s ################################################################################ # Testing # Testing ProtPlot Status `/tmp/jl_2gSa8y/Project.toml` [8ed43e74] AssigningSecondaryStructure v0.5.1 [9ac9c2a2] Backboner v0.12.2 [de9282ab] BioStructures v4.6.0 [3da002f7] ColorTypes v0.12.1 [39dd38d3] Dierckx v0.5.4 ⌃ [e9467ef8] GLMakie v0.11.11 [86223c79] Graphs v1.13.0 ⌅ [ee78f7c6] Makie v0.22.10 [77b3afcc] ProtPlot v0.5.10 [b8e8f2a5] ProteinChains v0.7.3 [37e2e46d] LinearAlgebra v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_2gSa8y/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [79e6a3ab] Adapt v4.3.0 [35492f91] AdaptivePredicates v1.2.0 [66dad0bd] AliasTables v1.1.3 [27a7e980] Animations v0.4.2 [ec485272] ArnoldiMethod v0.4.0 [8ed43e74] AssigningSecondaryStructure v0.5.1 [a9b6321e] Atomix v1.1.1 [67c07d97] Automa v1.1.0 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.7 [9ac9c2a2] Backboner v0.12.2 [18cc8868] BaseDirs v1.3.2 [47718e42] BioGenerics v0.1.5 [de9282ab] BioStructures v4.6.0 [3c28c6f8] BioSymbols v5.2.0 [c3b6d118] BitIntegers v0.3.5 [fa961155] CEnum v0.5.0 [96374032] CRlibm v1.0.2 [d360d2e6] ChainRulesCore v1.25.2 [944b1d66] CodecZlib v0.7.8 [a2cac450] ColorBrewer v0.4.1 [35d6a980] ColorSchemes v3.30.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 [34da2185] Compat v4.17.0 [187b0558] ConstructionBase v1.6.0 [d38c429a] Contour v0.6.3 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [927a84f5] DelaunayTriangulation v1.6.4 [39dd38d3] Dierckx v0.5.4 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.5 [e139c391] DynamicStructs v0.2.3 [4e289a0a] EnumX v1.0.5 [429591f6] ExactPredicates v2.2.8 [411431e0] Extents v0.1.6 [7a1cc6ca] FFTW v1.9.0 [5789e2e9] FileIO v1.17.0 ⌅ [8fc22ac5] FilePaths v0.8.3 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.13.0 [53c48c17] FixedPointNumbers v0.8.5 [1fa38f19] Format v1.3.7 [b38be410] FreeType v4.1.1 [663a7486] FreeTypeAbstraction v0.10.8 [f7f18e0c] GLFW v3.4.4 ⌃ [e9467ef8] GLMakie v0.11.11 [46192b85] GPUArraysCore v0.2.0 [5c1252a2] GeometryBasics v0.5.10 [86223c79] Graphs v1.13.0 [3955a311] GridLayoutBase v0.11.1 [42e2da0e] Grisu v1.0.2 [f67ccb44] HDF5 v0.17.2 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [2803e5a7] ImageAxes v0.6.12 [c817782e] ImageBase v0.1.7 [a09fc81d] ImageCore v0.10.5 [82e4d734] ImageIO v0.6.9 [bc367c6b] ImageMetadata v0.9.10 [9b13fd28] IndirectArrays v1.0.0 [d25df0c9] Inflate v0.1.5 [842dd82b] InlineStrings v1.4.4 ⌅ [a98d9a8b] Interpolations v0.15.1 [d1acc4aa] IntervalArithmetic v0.22.36 [8197267c] IntervalSets v0.7.11 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.4 [f1662d9f] Isoband v0.1.1 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.5.15 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v0.21.4 [b835a17e] JpegTurbo v0.1.6 [63c18a36] KernelAbstractions v0.9.38 [5ab0869b] KernelDensity v0.6.10 [b964fa9f] LaTeXStrings v1.4.0 [8cdb02fc] LazyModules v0.3.1 [2ab3a3ac] LogExpFunctions v0.3.29 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.16 ⌅ [ee78f7c6] Makie v0.22.10 ⌅ [20f20a25] MakieCore v0.9.5 [dbb5928d] MappedArrays v0.4.2 [0a4f8689] MathTeXEngine v0.6.5 [7269a6da] MeshIO v0.5.3 [e1d29d7a] Missings v1.2.0 [66fc600b] ModernGL v1.1.8 [e94cdb99] MosaicViews v0.3.4 [872c559c] NNlib v0.9.31 [b8a86587] NearestNeighbors v0.4.22 [f09324ee] Netpbm v1.1.1 [510215fc] Observables v0.5.5 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with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling packages... Info Given GLMakie was explicitly requested, output will be shown live  ┌ Warning: GLFW couldn't create an OpenGL window. │ This likely means, you don't have an OpenGL capable Graphic Card, │ or you don't have an OpenGL 3.3 capable video driver installed. │ Have a look at the troubleshooting section in the GLMakie readme: │ https://github.com/MakieOrg/Makie.jl/tree/master/GLMakie#troubleshooting-opengl. └ @ GLMakie ~/.julia/packages/GLMakie/1dQSN/src/screen.jl:291 ERROR: LoadError: GLFWError (API_UNAVAILABLE): GLX: No GLXFBConfigs returned Stacktrace:  [1] _ErrorCallbackWrapper(code::Int32, description::Cstring)  @ GLFW ~/.julia/packages/GLFW/a10jC/src/callback.jl:46  [2] CreateWindow(width::Int64, height::Int64, title::String, monitor::GLFW.Monitor, share::GLFW.Window)  @ GLFW ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:580  [3] GLFW.Window(; name::String, resolution::Tuple{Int64, Int64}, debugging::Bool, major::Int64, minor::Int64, windowhints::Vector{Tuple{UInt32, Integer}}, contexthints::Vector{Tuple{UInt32, Integer}}, visible::Bool, focus::Bool, fullscreen::Bool, monitor::Nothing, share::GLFW.Window)  @ GLFW ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:404  [4] Window  @ ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:362 [inlined]  [5] empty_screen(debugging::Bool, reuse::Bool, window::Nothing)  @ GLMakie ~/.julia/packages/GLMakie/1dQSN/src/screen.jl:282  [6] empty_screen(debugging::Bool; reuse::Bool, window::Nothing)  @ GLMakie ~/.julia/packages/GLMakie/1dQSN/src/screen.jl:256  [7] singleton_screen(debugging::Bool)  @ GLMakie ~/.julia/packages/GLMakie/1dQSN/src/screen.jl:391  [8] macro expansion  @ ~/.julia/packages/GLMakie/1dQSN/src/precompiles.jl:21 [inlined]  [9] macro expansion  @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined]  [10] macro expansion  @ ~/.julia/packages/GLMakie/1dQSN/src/precompiles.jl:18 [inlined]  [11] macro expansion  @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined]  [12] top-level scope  @ ~/.julia/packages/GLMakie/1dQSN/src/precompiles.jl:16  [13] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:312  [14] top-level scope  @ ~/.julia/packages/GLMakie/1dQSN/src/GLMakie.jl:100  [15] include(mod::Module, _path::String)  @ Base ./Base.jl:311  [16] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3002  [17] top-level scope  @ stdin:5  [18] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2848  [20] include_string  @ ./loading.jl:2858 [inlined]  [21] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:318  [22] _start()  @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/GLMakie/1dQSN/src/precompiles.jl:15 in expression starting at /home/pkgeval/.julia/packages/GLMakie/1dQSN/src/GLMakie.jl:1 in expression starting at stdin:5 ✗ GLMakie 0 dependencies successfully precompiled in 77 seconds. 283 already precompiled. ERROR: LoadError: The following 1 direct dependency failed to precompile: GLMakie Failed to precompile GLMakie [e9467ef8-e4e7-5192-8a1a-b1aee30e663a] to "/home/pkgeval/.julia/compiled/v1.13/GLMakie/jl_1K39mz" (ProcessExited(1)). ┌ Warning: GLFW couldn't create an OpenGL window. │ This likely means, you don't have an OpenGL capable Graphic Card, │ or you don't have an OpenGL 3.3 capable video driver installed. │ Have a look at the troubleshooting section in the GLMakie readme: │ https://github.com/MakieOrg/Makie.jl/tree/master/GLMakie#troubleshooting-opengl. └ @ GLMakie ~/.julia/packages/GLMakie/1dQSN/src/screen.jl:291 ERROR: LoadError: GLFWError (API_UNAVAILABLE): GLX: No GLXFBConfigs returned Stacktrace: [1] _ErrorCallbackWrapper(code::Int32, description::Cstring) @ GLFW ~/.julia/packages/GLFW/a10jC/src/callback.jl:46 [2] CreateWindow(width::Int64, height::Int64, title::String, monitor::GLFW.Monitor, share::GLFW.Window) @ GLFW ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:580 [3] GLFW.Window(; name::String, resolution::Tuple{Int64, Int64}, debugging::Bool, major::Int64, minor::Int64, windowhints::Vector{Tuple{UInt32, Integer}}, contexthints::Vector{Tuple{UInt32, Integer}}, visible::Bool, focus::Bool, fullscreen::Bool, monitor::Nothing, share::GLFW.Window) @ GLFW ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:404 [4] Window @ ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:362 [inlined] [5] empty_screen(debugging::Bool, reuse::Bool, window::Nothing) @ GLMakie ~/.julia/packages/GLMakie/1dQSN/src/screen.jl:282 [6] empty_screen(debugging::Bool; reuse::Bool, window::Nothing) @ GLMakie ~/.julia/packages/GLMakie/1dQSN/src/screen.jl:256 [7] singleton_screen(debugging::Bool) @ GLMakie ~/.julia/packages/GLMakie/1dQSN/src/screen.jl:391 [8] macro expansion @ ~/.julia/packages/GLMakie/1dQSN/src/precompiles.jl:21 [inlined] [9] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [10] macro expansion @ ~/.julia/packages/GLMakie/1dQSN/src/precompiles.jl:18 [inlined] [11] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] [12] top-level scope @ ~/.julia/packages/GLMakie/1dQSN/src/precompiles.jl:16 [13] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [14] top-level scope @ ~/.julia/packages/GLMakie/1dQSN/src/GLMakie.jl:100 [15] include(mod::Module, _path::String) @ Base ./Base.jl:311 [16] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3002 [17] top-level scope @ stdin:5 [18] eval(m::Module, e::Any) @ Core ./boot.jl:489 [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [20] include_string @ ./loading.jl:2858 [inlined] [21] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [22] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/GLMakie/1dQSN/src/precompiles.jl:15 in expression starting at /home/pkgeval/.julia/packages/GLMakie/1dQSN/src/GLMakie.jl:1 in expression starting at stdin: in expression starting at /home/pkgeval/.julia/packages/ProtPlot/swgM0/test/runtests.jl:1 Testing failed after 91.5s ERROR: LoadError: Package ProtPlot errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2661 [3] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2510 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:538 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:168 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [7] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [10] include(mod::Module, _path::String) @ Base ./Base.jl:311 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:320 [12] _start() @ Base ./client.jl:553 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 1678.98s: package fails to precompile