Package evaluation of DiskArrayEngine on Julia 1.13.0-DEV.897 (a39797a4fb*) started at 2025-07-25T05:52:58.663 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.18s ################################################################################ # Installation # Installing DiskArrayEngine... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [2d4b2e14] + DiskArrayEngine v0.2.3 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.15.0 [fbe9abb3] + AWS v1.94.1 ⌅ [1c724243] + AWSS3 v0.10.4 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.19.0 [4c555306] + ArrayLayouts v1.11.2 [31f734f8] + ArrowTypes v2.3.0 [a9b6321e] + Atomix v1.1.1 [13072b0f] + AxisAlgorithms v1.1.0 [6e4b80f9] + BenchmarkTools v1.6.0 [e2ed5e7c] + Bijections v0.2.2 [d1d4a3ce] + BitFlags v0.1.9 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [8e7c35d0] + BlockArrays v1.7.0 [a74b3585] + Blosc v0.7.3 [70df07ce] + BracketingNonlinearSolve v1.3.0 [2a0fbf3d] + CPUSummary v0.2.6 [d360d2e6] + ChainRulesCore v1.25.2 [fb6a15b2] + CloseOpenIntervals v0.1.13 [523fee87] + CodecBzip2 v0.8.5 [6309b1aa] + CodecInflate64 v0.1.3 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LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.7.15 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [efcefdf7] + PCRE2_jll v10.45.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 12.14s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... ERROR: LoadError: The following 1 direct dependency failed to precompile: DiskArrayEngine Failed to precompile DiskArrayEngine [2d4b2e14-ccd6-4284-b8b0-2378ace7c126] to "/home/pkgeval/.julia/compiled/v1.13/DiskArrayEngine/jl_JEotXh" (ProcessExited(1)). WARNING: Constructor for type "UInt8" was extended in `Zarr` without explicit qualification or import. NOTE: Assumed "UInt8" refers to `Base.UInt8`. This behavior is deprecated and may differ in future versions. NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function UInt8 end`. Hint: To silence the warning, qualify `UInt8` as `Base.UInt8` in the method signature or explicitly `import Base: UInt8`. WARNING: Imported binding ModelingToolkit.mergedefaults was undeclared at import time during import to OptimizationMOI. WARNING: Imported binding Threads.inttypes was undeclared at import time during import to UnsafeAtomics. WARNING: Imported binding Threads.llvmtypes was undeclared at import time during import to UnsafeAtomics. ERROR: LoadError: UndefVarError: `inttypes` not defined in `ConcurrentCollections.Implementations.UnsafeAtomics` Suggestion: this global was defined as `Base.Threads.inttypes` but not assigned a value. Stacktrace: [1] top-level scope @ ~/.julia/packages/ConcurrentCollections/QgIM8/src/UnsafeAtomics.jl:41 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [3] top-level scope @ ~/.julia/packages/ConcurrentCollections/QgIM8/src/ConcurrentCollections.jl:61 [4] include(mod::Module, _path::String) @ Base ./Base.jl:311 [5] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3002 [6] top-level scope @ stdin:5 [7] eval(m::Module, e::Any) @ Core ./boot.jl:489 [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [9] include_string @ ./loading.jl:2858 [inlined] [10] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [11] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/ConcurrentCollections/QgIM8/src/UnsafeAtomics.jl:1 in expression starting at /home/pkgeval/.julia/packages/ConcurrentCollections/QgIM8/src/ConcurrentCollections.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile ConcurrentCollections [5060bff5-0b44-40c5-b522-fcd3ca5cecdd] to "/home/pkgeval/.julia/compiled/v1.13/ConcurrentCollections/jl_rhtWIU" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3289 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2654 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#235 @ ./reflection.jl:1333 [inlined] [8] invokelatest_gr @ ./reflection.jl:1325 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3860 [10] maybe_cachefile_lock @ ./loading.jl:3857 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2640 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2468 [13] macro expansion @ ./loading.jl:2396 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2360 [16] require @ ./loading.jl:2336 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [20] top-level scope @ ~/.julia/packages/MemPool/xbec0/src/MemPool.jl:9 [21] include(mod::Module, _path::String) @ Base ./Base.jl:311 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3002 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [26] include_string @ ./loading.jl:2858 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [28] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/MemPool/xbec0/src/MemPool.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile MemPool [f9f48841-c794-520a-933b-121f7ba6ed94] to "/home/pkgeval/.julia/compiled/v1.13/MemPool/jl_blwck0" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3289 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2654 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#235 @ ./reflection.jl:1333 [inlined] [8] invokelatest_gr @ ./reflection.jl:1325 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3860 [10] maybe_cachefile_lock @ ./loading.jl:3857 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2640 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2468 [13] macro expansion @ ./loading.jl:2396 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2360 [16] require @ ./loading.jl:2336 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] _eval_import(imported::Bool, to::Module, from::Nothing, paths::Expr) @ Base ./module.jl:111 [19] top-level scope @ ~/.julia/packages/Dagger/kpFnb/src/Dagger.jl:7 [20] include(mod::Module, _path::String) @ Base ./Base.jl:311 [21] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3002 [22] top-level scope @ stdin:5 [23] eval(m::Module, e::Any) @ Core ./boot.jl:489 [24] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [25] include_string @ ./loading.jl:2858 [inlined] [26] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [27] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/Dagger/kpFnb/src/Dagger.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Dagger [d58978e5-989f-55fb-8d15-ea34adc7bf54] to "/home/pkgeval/.julia/compiled/v1.13/Dagger/jl_njCyEe" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3289 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2654 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#235 @ ./reflection.jl:1333 [inlined] [8] invokelatest_gr @ ./reflection.jl:1325 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3860 [10] maybe_cachefile_lock @ ./loading.jl:3857 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2640 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2468 [13] macro expansion @ ./loading.jl:2396 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2360 [16] require @ ./loading.jl:2336 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr}) @ Base ./module.jl:101 [20] top-level scope @ ~/.julia/packages/DiskArrayEngine/ZCmJW/src/daggerrunner.jl:1 [21] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:312 [22] top-level scope @ ~/.julia/packages/DiskArrayEngine/ZCmJW/src/DiskArrayEngine.jl:15 [23] include(mod::Module, _path::String) @ Base ./Base.jl:311 [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3002 [25] top-level scope @ stdin:5 [26] eval(m::Module, e::Any) @ Core ./boot.jl:489 [27] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [28] include_string @ ./loading.jl:2858 [inlined] [29] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [30] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/DiskArrayEngine/ZCmJW/src/daggerrunner.jl:1 in expression starting at /home/pkgeval/.julia/packages/DiskArrayEngine/ZCmJW/src/DiskArrayEngine.jl:1 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 2186.76s ################################################################################ # Testing # Testing DiskArrayEngine Status `/tmp/jl_4z1afU/Project.toml` [2d4b2e14] DiskArrayEngine v0.2.3 [3c3547ce] DiskArrays v0.4.14 [0a941bbe] Zarr v0.9.4 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [44cfe95a] Pkg v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_4z1afU/Manifest.toml` [47edcb42] ADTypes v1.15.0 [fbe9abb3] AWS v1.94.1 ⌅ [1c724243] AWSS3 v0.10.4 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.19.0 [4c555306] ArrayLayouts v1.11.2 [31f734f8] ArrowTypes v2.3.0 [a9b6321e] Atomix v1.1.1 [13072b0f] AxisAlgorithms v1.1.0 [6e4b80f9] BenchmarkTools v1.6.0 [e2ed5e7c] Bijections v0.2.2 [d1d4a3ce] BitFlags v0.1.9 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [8e7c35d0] BlockArrays v1.7.0 [a74b3585] Blosc v0.7.3 [70df07ce] BracketingNonlinearSolve v1.3.0 [2a0fbf3d] CPUSummary v0.2.6 [d360d2e6] ChainRulesCore v1.25.2 [fb6a15b2] CloseOpenIntervals v0.1.13 [523fee87] CodecBzip2 v0.8.5 [6309b1aa] CodecInflate64 v0.1.3 [944b1d66] CodecZlib v0.7.8 [861a8166] Combinatorics v1.0.3 [a80b9123] CommonMark v0.9.1 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.17.0 [b152e2b5] CompositeTypes v0.1.4 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [5060bff5] ConcurrentCollections v0.1.1 [f0e56b4a] ConcurrentUtilities v2.5.0 [88cd18e8] ConsoleProgressMonitor v0.1.2 [187b0558] ConstructionBase v1.6.0 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [d58978e5] Dagger v0.18.17 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [2b5f629d] DiffEqBase v6.178.0 [459566f4] DiffEqCallbacks v4.8.0 [77a26b50] DiffEqNoiseProcess v5.24.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.3 [2d4b2e14] DiskArrayEngine v0.2.3 [3c3547ce] DiskArrays v0.4.14 [8d63f2c5] DispatchDoctor v0.4.26 [fab6aee4] DistributedNext v1.0.0 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.5 [5b8099bc] DomainSets v0.7.15 [7c1d4256] DynamicPolynomials v0.6.2 [06fc5a27] DynamicQuantities v1.8.0 [4e289a0a] EnumX v1.0.5 [f151be2c] EnzymeCore v0.8.12 [460bff9d] ExceptionUnwrapping v0.1.11 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [8f5d6c58] EzXML v1.2.1 [7034ab61] FastBroadcast v0.3.5 [9aa1b823] FastClosures v0.3.2 [a4df4552] FastPower v1.1.3 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.13.0 [64ca27bc] FindFirstFunctions v1.4.1 [6a86dc24] FiniteDiff v2.27.0 [1fa38f19] Format v1.3.7 ⌅ [f6369f11] ForwardDiff v0.10.38 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 [d9f16b24] Functors v0.5.2 [46192b85] GPUArraysCore v0.2.0 [bc5e4493] GitHub v5.10.0 [c27321d9] Glob v1.3.1 [86223c79] Graphs v1.13.0 [cd3eb016] HTTP v1.10.17 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [615f187c] IfElse v0.1.1 [3263718b] ImplicitDiscreteSolve v0.1.3 [d25df0c9] Inflate v0.1.5 [83e8ac13] IniFile v0.5.1 [0c81fc1b] InputBuffers v1.1.1 [18e54dd8] IntegerMathUtils v0.1.3 ⌅ [a98d9a8b] Interpolations v0.15.1 [8197267c] IntervalSets v0.7.11 [3587e190] InverseFunctions v0.1.17 [b6b21f68] Ipopt v1.10.6 [92d709cd] IrrationalConstants v0.2.4 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v0.21.4 [0f8b85d8] JSON3 v1.14.3 [ae98c720] Jieko v0.2.1 [98e50ef6] JuliaFormatter v2.1.2 ⌅ [70703baa] JuliaSyntax v0.4.10 [ccbc3e58] JumpProcesses v9.16.1 [63c18a36] KernelAbstractions v0.9.38 [ba0b0d4f] Krylov v0.10.1 [5be7bae1] LBFGSB v0.4.1 [8ac3fa9e] LRUCache v1.6.2 [b964fa9f] LaTeXStrings v1.4.0 [23fbe1c1] Latexify v0.16.8 [10f19ff3] LayoutPointers v0.1.17 [5078a376] LazyArrays v2.6.2 [1d6d02ad] LeftChildRightSiblingTrees v0.2.1 [87fe0de2] LineSearch v0.1.4 [d3d80556] LineSearches v7.4.0 [7ed4a6bd] LinearSolve v3.23.0 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.1.0 [d8e11817] MLStyle v0.4.17 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [b8f27783] MathOptInterface v1.42.0 [bb5d69b7] MaybeInplace v0.1.4 [739be429] MbedTLS v1.1.9 [f9f48841] MemPool v0.4.13 [e1d29d7a] Missings v1.2.0 ⌅ [78c3b35d] Mocking v0.7.9 [961ee093] ModelingToolkit v10.13.0 [2e0e35c7] Moshi v0.3.7 [46d2c3a1] MuladdMacro v0.2.4 [102ac46a] MultivariatePolynomials v0.5.9 [d8a4904e] MutableArithmetics v1.6.4 [d41bc354] NLSolversBase v7.10.0 [77ba4419] NaNMath v1.1.3 [8913a72c] NonlinearSolve v4.10.0 [be0214bd] NonlinearSolveBase v1.13.0 [5959db7a] NonlinearSolveFirstOrder v1.6.0 [9a2c21bd] NonlinearSolveQuasiNewton v1.7.0 [26075421] NonlinearSolveSpectralMethods v1.2.0 [6fe1bfb0] OffsetArrays v1.17.0 [a15396b6] OnlineStats v1.7.1 [925886fa] OnlineStatsBase v1.7.1 [4d8831e6] OpenSSL v1.5.0 [429524aa] Optim v1.13.2 [7f7a1694] Optimization v4.4.0 [bca83a33] OptimizationBase v2.10.0 [fd9f6733] OptimizationMOI v0.5.5 [36348300] OptimizationOptimJL v0.4.3 [bac558e1] OrderedCollections v1.8.1 [bbf590c4] OrdinaryDiffEqCore v1.26.2 [90014a1f] PDMats v0.11.35 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [e409e4f3] PoissonRandom v0.4.5 [f517fe37] Polyester v0.7.18 [1d0040c9] PolyesterWeave v0.2.2 [85a6dd25] PositiveFactorizations v0.2.4 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [27ebfcd6] Primes v0.5.7 [33c8b6b6] ProgressLogging v0.1.5 [92933f4c] ProgressMeter v1.10.4 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [74087812] Random123 v1.7.1 [e6cf234a] RandomNumbers v1.6.0 [c84ed2f1] Ratios v0.4.5 [3cdcf5f2] RecipesBase v1.3.4 [731186ca] RecursiveArrayTools v3.35.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [ae5879a3] ResettableStacks v1.1.1 [20febd7b] Retry v0.4.1 [79098fc4] Rmath v0.8.0 [7e49a35a] RuntimeGeneratedFunctions v0.5.15 [9dfe8606] SCCNonlinearSolve v1.4.0 [94e857df] SIMDTypes v0.1.0 [0bca4576] SciMLBase v2.104.0 [19f34311] SciMLJacobianOperators v0.1.8 [c0aeaf25] SciMLOperators v1.3.1 [431bcebd] SciMLPublic v1.0.0 [53ae85a6] SciMLStructures v1.7.0 [7e506255] ScopedValues v1.4.0 [efcf1570] Setfield v1.1.2 [777ac1f9] SimpleBufferStream v1.2.0 [727e6d20] SimpleNonlinearSolve v2.7.0 [699a6c99] SimpleTraits v0.9.4 [ce78b400] SimpleUnPack v1.1.0 [2133526b] SodiumSeal v0.1.1 [a2af1166] SortingAlgorithms v1.2.1 [9f842d2f] SparseConnectivityTracer v1.0.0 [0a514795] SparseMatrixColorings v0.4.21 [276daf66] SpecialFunctions v2.5.1 [aedffcd0] Static v1.2.0 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.14 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.5 [4c63d2b9] StatsFuns v1.5.0 [7792a7ef] StrideArraysCore v0.5.7 [892a3eda] StringManipulation v0.4.1 [856f2bd8] StructTypes v1.11.0 [2da68c74] SymDict v0.3.0 [2efcf032] SymbolicIndexingInterface v0.3.42 [19f23fe9] SymbolicLimits v0.2.2 [d1185830] SymbolicUtils v3.29.0 [0c5d862f] Symbolics v6.45.0 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [ed4db957] TaskLocalValues v0.1.3 [8ea1fca8] TermInterface v2.0.0 [5d786b92] TerminalLoggers v0.1.7 [1c621080] TestItems v1.0.0 [8290d209] ThreadingUtilities v0.5.5 [a759f4b9] TimerOutputs v0.5.29 [a526e669] TimespanLogging v0.1.1 [3bb67fe8] TranscodingStreams v0.11.3 [410a4b4d] Tricks v0.1.10 [781d530d] TruncatedStacktraces v1.4.0 [5c2747f8] URIs v1.6.1 [3a884ed6] UnPack v1.0.2 [1986cc42] Unitful v1.23.1 [a7c27f48] Unityper v0.1.6 [013be700] UnsafeAtomics v0.3.0 [897b6980] WeakValueDicts v0.1.0 [efce3f68] WoodburyMatrices v1.0.0 [228000da] XMLDict v0.4.1 [0a941bbe] Zarr v0.9.4 [49080126] ZipArchives v2.5.1 [ae81ac8f] ASL_jll v0.1.3+0 [0b7ba130] Blosc_jll v1.21.7+0 [6e34b625] Bzip2_jll v1.0.9+0 [e33a78d0] Hwloc_jll v2.12.1+0 [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0 [9cc047cb] Ipopt_jll v300.1400.1701+0 [81d17ec3] L_BFGS_B_jll v3.0.1+0 [94ce4f54] Libiconv_jll v1.18.0+0 [5ced341a] Lz4_jll v1.10.1+0 [d00139f3] METIS_jll v5.1.3+0 [856f044c] MKL_jll v2025.2.0+0 [d7ed1dd3] MUMPS_seq_jll v500.800.0+0 [c8ffd9c3] MbedTLS_jll v2.28.6+2 [656ef2d0] OpenBLAS32_jll v0.3.29+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [319450e9] SPRAL_jll v2025.5.20+0 ⌅ [02c8fc9c] XML2_jll v2.13.6+1 [a9144af2] libsodium_jll v1.0.21+0 [1317d2d5] oneTBB_jll v2022.0.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [9abbd945] Profile v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.14.1+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.7.15 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.1+0 [efcefdf7] PCRE2_jll v10.45.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... ✗ ConcurrentCollections ✗ MemPool ✗ Dagger ✗ Dagger → JSON3Ext ✗ Dagger → DistributionsExt Info Given DiskArrayEngine was explicitly requested, output will be shown live   ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ======================================================================================  cmd: /opt/julia/bin/julia 519 running 1 of 1  signal (10): User defined signal 1 _useref_getindex at ./../usr/share/julia/Compiler/src/ssair/ir.jl:0 getindex at ./../usr/share/julia/Compiler/src/ssair/ir.jl:578 [inlined] ssa_substitute_op! at ./../usr/share/julia/Compiler/src/ssair/inlining.jl:1848 ir_inline_item! at ./../usr/share/julia/Compiler/src/ssair/inlining.jl:417 batch_inline! at ./../usr/share/julia/Compiler/src/ssair/inlining.jl:663 ssa_inlining_pass! at ./../usr/share/julia/Compiler/src/ssair/inlining.jl:79 [inlined] run_passes_ipo_safe at ./../usr/share/julia/Compiler/src/optimize.jl:1035 run_passes_ipo_safe at ./../usr/share/julia/Compiler/src/optimize.jl:1048 [inlined] optimize at ./../usr/share/julia/Compiler/src/optimize.jl:1021 jfptr_optimize_84167.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 finish_nocycle at ./../usr/share/julia/Compiler/src/typeinfer.jl:232 jfptr_finish_nocycle_83685.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 typeinf at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4476 typeinf_ext at ./../usr/share/julia/Compiler/src/typeinfer.jl:1378 typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1561 [inlined] typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1570 jfptr_typeinf_ext_toplevel_85761.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2346 [inlined] jl_type_infer at /source/src/gf.c:462 _generate_from_hint at /source/src/gf.c:3833 [inlined] jl_compile_now at /source/src/gf.c:3847 [inlined] ijl_compile_method_instance at /source/src/gf.c:3860 precompile at ./loading.jl:4225 [inlined] precompile at ./loading.jl:4225 [inlined] precompile_mi at /home/pkgeval/.julia/packages/PrecompileTools/Z8SWe/src/PrecompileTools.jl:10 [inlined] foreach at ./abstractarray.jl:3202 recompile_invalidations at /home/pkgeval/.julia/packages/PrecompileTools/Z8SWe/src/invalidations.jl:25 unknown function (ip: 0x78093e5013b6) at (unknown file) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2346 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_eval_module_expr at /source/src/toplevel.c:196 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:658 jl_toplevel_eval_flex at /source/src/toplevel.c:713 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 _include at ./loading.jl:2908 include at ./Base.jl:311 include_package_for_output at ./loading.jl:3002 jfptr_include_package_for_output_34928.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2346 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 include_string at ./loading.jl:2858 [inlined] exec_options at ./client.jl:318 _start at ./client.jl:553 jfptr__start_66188.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2346 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x78093f96e249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file)  ============================================================== Profile collected. A report will print at the next yield point ==============================================================   ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ======================================================================================  cmd: /opt/julia/bin/julia 499 running 0 of 1  signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_54969.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2346 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file)  ============================================================== Profile collected. A report will print at the next yield point ==============================================================  ┌ Error: Profile printing listener crashed │ exception = │ This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib. │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:44 │ [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing, from::Module) │ @ Base ./loading.jl:2763 │ [3] require_stdlib │ @ ./loading.jl:2759 [inlined] │ [4] macro expansion │ @ ./some.jl:158 [inlined] │ [5] profile_printing_listener(cond::Base.AsyncCondition) │ @ Base ./Base.jl:338 │ [6] (::Base.var"#start_profile_listener##0#start_profile_listener##1"{Base.AsyncCondition})() │ @ Base ./Base.jl:357 └ @ Base Base.jl:348  ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ======================================================================================  cmd: /opt/julia/bin/julia 487 running 0 of 1  signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_54969.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2346 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file)  ============================================================== Profile collected. A report will print at the next yield point ==============================================================  ┌ Error: Profile printing listener crashed │ exception = │ This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib. │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:44 │ [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing, from::Module) │ @ Base ./loading.jl:2763 │ [3] require_stdlib │ @ ./loading.jl:2759 [inlined] │ [4] macro expansion │ @ ./some.jl:158 [inlined] │ [5] profile_printing_listener(cond::Base.AsyncCondition) │ @ Base ./Base.jl:338 │ [6] (::Base.var"#start_profile_listener##0#start_profile_listener##1"{Base.AsyncCondition})() │ @ Base ./Base.jl:357 └ @ Base Base.jl:348 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 427 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_54969.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2346 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007e75531e02e0 Total snapshots: 185. Utilization: 0% ╎185 @Base/task.jl:1129 wait_forever() 184╎ 185 @Base/task.jl:1192 wait() ┌ Error: Profile printing listener crashed │ exception = │ This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib. │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:44 │ [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing, from::Module) │ @ Base ./loading.jl:2763 │ [3] require_stdlib │ @ ./loading.jl:2759 [inlined] │ [4] macro expansion │ @ ./some.jl:158 [inlined] │ [5] profile_printing_listener(cond::Base.AsyncCondition) │ @ Base ./Base.jl:338 │ [6] (::Base.var"#start_profile_listener##0#start_profile_listener##1"{Base.AsyncCondition})() │ @ Base ./Base.jl:357 └ @ Base Base.jl:348 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_54969.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2346 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x0000793722cd9d20 Total snapshots: 415. Utilization: 0% ╎415 @Base/task.jl:1129 wait_forever() 414╎ 415 @Base/task.jl:1192 wait() [427] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/DiskArrayEngine/ZCmJW/test/runtests.jl:1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_54969.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2346 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 23793000 (Pool: 23792755; Big: 245); GC: 50 [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_54969.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2346 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 31326947 (Pool: 31326294; Big: 653); GC: 27  PkgEval terminated after 2754.58s: test duration exceeded the time limit