Package evaluation of Catlab on Julia 1.13.0-DEV.888 (0e1aa6c7eb*) started at 2025-07-22T17:58:00.520 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.97s ################################################################################ # Installation # Installing Catlab... Resolving package versions... ┌ Warning: tarball content does not match git-tree-sha1 └ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:845 Cloning [227ef7b5-1206-438b-ac65-934d6da304b8] ACSets from https://github.com/AlgebraicJulia/ACSets.jl.git Installed ACSets ─ v0.2.24 Updating `~/.julia/environments/v1.13/Project.toml` [134e5e36] + Catlab v0.16.20 Updating `~/.julia/environments/v1.13/Manifest.toml` [227ef7b5] + ACSets v0.2.24 [23cfdc9f] + AlgebraicInterfaces v0.1.4 [134e5e36] + Catlab v0.16.20 [3da002f7] + ColorTypes v0.12.1 [5ae59095] + Colors v0.13.1 [861a8166] + Combinatorics v1.0.3 [0fb5dd42] + CompTime v0.1.2 [34da2185] + Compat v4.17.0 [a81c6b42] + Compose v0.9.6 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [53c48c17] + FixedPointNumbers v0.8.5 ⌅ [f0ffcf3b] + GATlab v0.1.6 [6b9d7cbe] + GeneralizedGenerated v0.3.3 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] + JSON v0.21.4 [0f8b85d8] + JSON3 v1.14.3 [b14d175d] + JuliaVariables v0.2.4 [b964fa9f] + LaTeXStrings v1.4.0 [9c8b4983] + LightXML v0.9.2 [d8e11817] + MLStyle v0.4.17 [1914dd2f] + MacroTools v0.5.16 [442fdcdd] + Measures v0.3.2 [71a1bf82] + NameResolution v0.1.5 [bac558e1] + OrderedCollections v1.8.1 [12d937ae] + PEG v1.0.4 [69de0a69] + Parsers v2.8.3 [2ae35dd2] + Permutations v0.4.23 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [8162dcfd] + PrettyPrint v0.2.0 [08abe8d2] + PrettyTables v2.4.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [90137ffa] + StaticArrays v1.9.14 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [892a3eda] + StringManipulation v0.4.1 [6ec83bb0] + StructEquality v2.1.0 [856f2bd8] + StructTypes v1.11.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [94ce4f54] + Libiconv_jll v1.18.0+0 [02c8fc9c] + XML2_jll v2.14.4+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.14.1+1 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.7.15 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [efcefdf7] + PCRE2_jll v10.45.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 6.25s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... ERROR: LoadError: The following 2 direct dependencies failed to precompile: CatlabMetaGraphsExt Failed to precompile CatlabMetaGraphsExt [290f8f77-2072-5e21-992d-8502a00cff2b] to "/home/pkgeval/.julia/compiled/v1.13/CatlabMetaGraphsExt/jl_HwvDux" (ProcessExited(1)). Error encountered while load FileIO.File{FileIO.DataFormat{:JLD2}, String}("/tmp/jl_Kucyz7"). Fatal error: ERROR: LoadError: ConcurrencyViolationError("deadlock detected in loading JLD2 using JLD2") Stacktrace: [1] canstart_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool) @ Base ./loading.jl:2184 [2] start_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool) @ Base ./loading.jl:2192 [3] _require_prelocked(uuidkey::Base.PkgId, env::Nothing) @ Base ./loading.jl:2463 [4] _require_prelocked @ ./loading.jl:2462 [inlined] [5] macro expansion @ ./lock.jl:376 [inlined] [6] __require(uuidkey::Base.PkgId) @ Base ./loading.jl:2460 [7] require @ ./loading.jl:2458 [inlined] [8] #37 @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:203 [inlined] [9] lock(f::FileIO.var"#37#38"{Base.PkgId}, l::ReentrantLock) @ Base ./lock.jl:335 [10] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:203 [11] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:196 [inlined] [12] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:185 [inlined] [13] load(::String; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:113 [14] load @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:109 [inlined] [15] #111 @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:26 [inlined] [16] mktemp(fn::JLD2.var"#111#112"{Symbol, Vector{Float64}, NTuple{5, Int64}, String, Dict{String, Int64}, Matrix{ComplexF64}, Vector{Float64}, Float64, Int64}, parent::String) @ Base.Filesystem ./file.jl:870 [17] mktemp(fn::Function) @ Base.Filesystem ./file.jl:868 [18] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:15 [inlined] [19] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [20] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:14 [inlined] [21] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] [22] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:118 Stacktrace: [1] handle_error(e::ConcurrencyViolationError, q::Base.PkgId, bt::Vector{Union{Ptr{Nothing}, Base.InterpreterIP}}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/error_handling.jl:71 [2] handle_exceptions(exceptions::Vector{Tuple{Any, Union{Base.PkgId, Module}, Vector}}, action::String) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/error_handling.jl:66 [3] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:228 [4] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:196 [inlined] [5] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:185 [inlined] [6] load(::String; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:113 [7] load @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:109 [inlined] [8] #111 @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:26 [inlined] [9] mktemp(fn::JLD2.var"#111#112"{Symbol, Vector{Float64}, NTuple{5, Int64}, String, Dict{String, Int64}, Matrix{ComplexF64}, Vector{Float64}, Float64, Int64}, parent::String) @ Base.Filesystem ./file.jl:870 [10] mktemp(fn::Function) @ Base.Filesystem ./file.jl:868 [11] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:15 [inlined] [12] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [13] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:14 [inlined] [14] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] [15] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:118 [16] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [17] IncludeInto @ ./Base.jl:311 [inlined] [18] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/JLD2.jl:518 [19] include(mod::Module, _path::String) @ Base ./Base.jl:309 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3002 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [24] include_string @ ./loading.jl:2858 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [26] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/JLD2/wLPAN/src/precompile.jl:3 in expression starting at /home/pkgeval/.julia/packages/JLD2/wLPAN/src/JLD2.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile JLD2 [033835bb-8acc-5ee8-8aae-3f567f8a3819] to "/home/pkgeval/.julia/compiled/v1.13/JLD2/jl_9Sjlm1" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3289 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2654 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#236 @ ./reflection.jl:1333 [inlined] [8] invokelatest_gr @ ./reflection.jl:1325 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3860 [10] maybe_cachefile_lock @ ./loading.jl:3857 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2640 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2468 [13] macro expansion @ ./loading.jl:2396 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2360 [16] require @ ./loading.jl:2336 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [20] top-level scope @ ~/.julia/packages/MetaGraphs/qq8oz/src/MetaGraphs.jl:3 [21] include(mod::Module, _path::String) @ Base ./Base.jl:309 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3002 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [26] include_string @ ./loading.jl:2858 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [28] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/MetaGraphs/qq8oz/src/MetaGraphs.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile MetaGraphs [626554b9-1ddb-594c-aa3c-2596fe9399a5] to "/home/pkgeval/.julia/compiled/v1.13/MetaGraphs/jl_R99sxL" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3289 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2654 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#236 @ ./reflection.jl:1333 [inlined] [8] invokelatest_gr @ ./reflection.jl:1325 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3860 [10] maybe_cachefile_lock @ ./loading.jl:3857 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2640 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2468 [13] macro expansion @ ./loading.jl:2396 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2360 [16] require @ ./loading.jl:2336 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] _eval_import(imported::Bool, to::Module, from::Nothing, paths::Expr) @ Base ./module.jl:111 [19] top-level scope @ ~/.julia/packages/Catlab/1srGD/ext/CatlabMetaGraphsExt.jl:5 [20] include(mod::Module, _path::String) @ Base ./Base.jl:309 [21] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3002 [22] top-level scope @ stdin:5 [23] eval(m::Module, e::Any) @ Core ./boot.jl:489 [24] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [25] include_string @ ./loading.jl:2858 [inlined] [26] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [27] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/Catlab/1srGD/ext/CatlabMetaGraphsExt.jl:1 in expression starting at stdin:5 MetaGraphs Failed to precompile MetaGraphs [626554b9-1ddb-594c-aa3c-2596fe9399a5] to "/home/pkgeval/.julia/compiled/v1.13/MetaGraphs/jl_cVK8w1" (ProcessExited(1)). Error encountered while load FileIO.File{FileIO.DataFormat{:JLD2}, String}("/tmp/jl_v0wrh4"). Fatal error: ERROR: LoadError: ConcurrencyViolationError("deadlock detected in loading JLD2 using JLD2") Stacktrace: [1] canstart_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool) @ Base ./loading.jl:2184 [2] start_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool) @ Base ./loading.jl:2192 [3] _require_prelocked(uuidkey::Base.PkgId, env::Nothing) @ Base ./loading.jl:2463 [4] _require_prelocked @ ./loading.jl:2462 [inlined] [5] macro expansion @ ./lock.jl:376 [inlined] [6] __require(uuidkey::Base.PkgId) @ Base ./loading.jl:2460 [7] require @ ./loading.jl:2458 [inlined] [8] #37 @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:203 [inlined] [9] lock(f::FileIO.var"#37#38"{Base.PkgId}, l::ReentrantLock) @ Base ./lock.jl:335 [10] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:203 [11] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:196 [inlined] [12] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:185 [inlined] [13] load(::String; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:113 [14] load @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:109 [inlined] [15] #111 @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:26 [inlined] [16] mktemp(fn::JLD2.var"#111#112"{Symbol, Vector{Float64}, NTuple{5, Int64}, String, Dict{String, Int64}, Matrix{ComplexF64}, Vector{Float64}, Float64, Int64}, parent::String) @ Base.Filesystem ./file.jl:870 [17] mktemp(fn::Function) @ Base.Filesystem ./file.jl:868 [18] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:15 [inlined] [19] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [20] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:14 [inlined] [21] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] [22] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:118 Stacktrace: [1] handle_error(e::ConcurrencyViolationError, q::Base.PkgId, bt::Vector{Union{Ptr{Nothing}, Base.InterpreterIP}}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/error_handling.jl:71 [2] handle_exceptions(exceptions::Vector{Tuple{Any, Union{Base.PkgId, Module}, Vector}}, action::String) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/error_handling.jl:66 [3] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:228 [4] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:196 [inlined] [5] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:185 [inlined] [6] load(::String; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:113 [7] load @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:109 [inlined] [8] #111 @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:26 [inlined] [9] mktemp(fn::JLD2.var"#111#112"{Symbol, Vector{Float64}, NTuple{5, Int64}, String, Dict{String, Int64}, Matrix{ComplexF64}, Vector{Float64}, Float64, Int64}, parent::String) @ Base.Filesystem ./file.jl:870 [10] mktemp(fn::Function) @ Base.Filesystem ./file.jl:868 [11] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:15 [inlined] [12] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [13] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:14 [inlined] [14] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] [15] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:118 [16] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [17] IncludeInto @ ./Base.jl:311 [inlined] [18] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/JLD2.jl:518 [19] include(mod::Module, _path::String) @ Base ./Base.jl:309 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3002 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [24] include_string @ ./loading.jl:2858 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [26] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/JLD2/wLPAN/src/precompile.jl:3 in expression starting at /home/pkgeval/.julia/packages/JLD2/wLPAN/src/JLD2.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile JLD2 [033835bb-8acc-5ee8-8aae-3f567f8a3819] to "/home/pkgeval/.julia/compiled/v1.13/JLD2/jl_pAbSm7" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3289 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2654 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#236 @ ./reflection.jl:1333 [inlined] [8] invokelatest_gr @ ./reflection.jl:1325 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3860 [10] maybe_cachefile_lock @ ./loading.jl:3857 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2640 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2468 [13] macro expansion @ ./loading.jl:2396 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2360 [16] require @ ./loading.jl:2336 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [20] top-level scope @ ~/.julia/packages/MetaGraphs/qq8oz/src/MetaGraphs.jl:3 [21] include(mod::Module, _path::String) @ Base ./Base.jl:309 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3002 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [26] include_string @ ./loading.jl:2858 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [28] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/MetaGraphs/qq8oz/src/MetaGraphs.jl:1 in expression starting at stdin:5 in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 203.67s ################################################################################ # Testing # Testing Catlab Status `/tmp/jl_nsIlRS/Project.toml` [227ef7b5] ACSets v0.2.24 [23cfdc9f] AlgebraicInterfaces v0.1.4 [134e5e36] Catlab v0.16.20 [a81c6b42] Compose v0.9.6 [a93c6f00] DataFrames v1.7.0 [864edb3b] DataStructures v0.18.22 ⌅ [f0ffcf3b] GATlab v0.1.6 [86223c79] Graphs v1.13.0 [42fd0dbc] IterativeSolvers v0.9.4 [0f8b85d8] JSON3 v1.14.3 [9c8b4983] LightXML v0.9.2 ⌃ [626554b9] MetaGraphs v0.7.2 [12d937ae] PEG v1.0.4 [90137ffa] StaticArrays v1.9.14 [bd369af6] Tables v1.12.1 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_nsIlRS/Manifest.toml` [227ef7b5] ACSets v0.2.24 [23cfdc9f] AlgebraicInterfaces v0.1.4 [ec485272] ArnoldiMethod v0.4.0 [134e5e36] Catlab v0.16.20 [3da002f7] ColorTypes v0.12.1 [5ae59095] Colors v0.13.1 [861a8166] Combinatorics v1.0.3 [0fb5dd42] CompTime v0.1.2 [34da2185] Compat v4.17.0 [a81c6b42] Compose v0.9.6 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.7.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [5789e2e9] FileIO v1.17.0 [53c48c17] FixedPointNumbers v0.8.5 ⌅ [f0ffcf3b] GATlab v0.1.6 [6b9d7cbe] GeneralizedGenerated v0.3.3 [86223c79] Graphs v1.13.0 [d25df0c9] Inflate v0.1.5 [842dd82b] InlineStrings v1.4.4 [41ab1584] InvertedIndices v1.3.1 [c8e1da08] IterTools v1.10.0 [42fd0dbc] IterativeSolvers v0.9.4 [82899510] IteratorInterfaceExtensions v1.0.0 ⌅ [033835bb] JLD2 v0.4.54 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [0f8b85d8] JSON3 v1.14.3 [b14d175d] JuliaVariables v0.2.4 [b964fa9f] LaTeXStrings v1.4.0 [9c8b4983] LightXML v0.9.2 [d8e11817] MLStyle v0.4.17 [1914dd2f] MacroTools v0.5.16 [442fdcdd] Measures v0.3.2 ⌃ [626554b9] MetaGraphs v0.7.2 [e1d29d7a] Missings v1.2.0 [71a1bf82] NameResolution v0.1.5 [bac558e1] OrderedCollections v1.8.1 [12d937ae] PEG v1.0.4 [69de0a69] Parsers v2.8.3 [2ae35dd2] Permutations v0.4.23 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [8162dcfd] PrettyPrint v0.2.0 [08abe8d2] PrettyTables v2.4.0 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [91c51154] SentinelArrays v1.4.8 [699a6c99] SimpleTraits v0.9.4 [a2af1166] SortingAlgorithms v1.2.1 [90137ffa] StaticArrays v1.9.14 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [892a3eda] StringManipulation v0.4.1 [6ec83bb0] StructEquality v2.1.0 [856f2bd8] StructTypes v1.11.0 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [3bb67fe8] TranscodingStreams v0.11.3 [94ce4f54] Libiconv_jll v1.18.0+0 [02c8fc9c] XML2_jll v2.14.4+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.14.1+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.7.15 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.1+0 [efcefdf7] PCRE2_jll v10.45.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Test Summary: | Pass Total Time Theories | 275 275 1m41.7s Categories: Error During Test at /home/pkgeval/.julia/packages/Catlab/1srGD/test/categorical_algebra/FinCats.jl:40 Test threw exception Expression: edges(g) == [1, 3] MethodError: no method matching edges(::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{1, Int64}}}) The function `edges` exists, but no method is defined for this combination of argument types. Closest candidates are: edges(!Matched::Catlab.Graphs.BasicGraphs.HasGraph) @ Catlab ~/.julia/packages/Catlab/1srGD/src/graphs/BasicGraphs.jl:106 edges(!Matched::Catlab.Graphs.BasicGraphs.HasGraph, !Matched::Int64, !Matched::Int64) @ Catlab ~/.julia/packages/Catlab/1srGD/src/graphs/BasicGraphs.jl:107 edges(!Matched::Catlab.Graphs.BipartiteGraphs.AbstractUndirectedBipartiteGraph) @ Catlab ~/.julia/packages/Catlab/1srGD/src/graphs/BipartiteGraphs.jl:135 ... Stacktrace: [1] top-level scope @ ~/.julia/packages/Catlab/1srGD/test/categorical_algebra/FinCats.jl:529 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:738 [inlined] Categories: Error During Test at /home/pkgeval/.julia/packages/Catlab/1srGD/test/categorical_algebra/FinCats.jl:76 Test threw exception Expression: hom_map(G, Path(h, [1, 2])) == Path(k, [1, 2, 3, 4]) MethodError: no method matching has_part(::Catlab.Graphs.BasicGraphs.Graph, ::Symbol, ::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{0, Int64}}) The function `has_part` exists, but no method is defined for this combination of argument types. Closest candidates are: has_part(::Any, ::Symbol, !Matched::Int64) @ ACSets ~/.julia/packages/ACSets/arYE8/src/ACSetInterface.jl:102 has_part(::Any, ::Symbol, !Matched::AbstractVector{Int64}) @ ACSets ~/.julia/packages/ACSets/arYE8/src/ACSetInterface.jl:103 has_part(::ACSets.DenseACSets.StructACSet{S}, ::Symbol) where S @ ACSets ~/.julia/packages/ACSets/arYE8/src/DenseACSets.jl:467 ... Stacktrace: [1] has_edge(g::Catlab.Graphs.BasicGraphs.Graph, e::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{0, Int64}}) @ Catlab.Graphs.BasicGraphs ~/.julia/packages/Catlab/1srGD/src/graphs/BasicGraphs.jl:124 [2] (::Catlab.CategoricalAlgebra.FinCats.var"#Path##0#Path##1"{Catlab.Graphs.BasicGraphs.Graph})(e::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{0, Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:187 [3] _all @ ./anyall.jl:211 [inlined] [4] all @ ./reducedim.jl:996 [inlined] [5] Catlab.CategoricalAlgebra.FinCats.Path(g::Catlab.Graphs.BasicGraphs.Graph, es::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:187 [6] coerce_path(g::Catlab.Graphs.BasicGraphs.Graph, x::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:233 [7] (::Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}})(f::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ./none:-1 [8] MappingRF @ ./reduce.jl:98 [inlined] [9] afoldl(::Base.MappingRF{Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}, Base.BottomRF{typeof(vcat)}}, ::Base._InitialValue, ::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, ::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}) @ Base ./operators.jl:600 [10] _foldl_impl(op::Base.MappingRF{Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}, Base.BottomRF{typeof(vcat)}}, init::Base._InitialValue, itr::Tuple{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}) @ Base ./reduce.jl:66 [11] foldl_impl(op::Base.MappingRF{Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}, Base.BottomRF{typeof(vcat)}}, nt::Base._InitialValue, itr::Tuple{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}) @ Base ./reduce.jl:46 [12] mapfoldl_impl(f::typeof(identity), op::typeof(vcat), nt::Base._InitialValue, itr::Base.Generator{Tuple{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}, Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}}) @ Base ./reduce.jl:42 [13] mapfoldl(f::Function, op::Function, itr::Base.Generator{Tuple{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}, Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}}; init::Base._InitialValue) @ Base ./reduce.jl:173 [14] mapreduce(f::Function, op::Function, itr::Base.Generator{Tuple{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}, Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}}; kw::@Kwargs{}) @ Base ./reduce.jl:305 [15] reduce(op::Function, itr::Base.Generator{Tuple{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}, Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}}; kw::@Kwargs{}) @ Base ./reduce.jl:489 [16] compose(::Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, ::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, ::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:227 [17] (::Catlab.CategoricalAlgebra.FinCats.var"#hom_map##2#hom_map##3"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}})(::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, ::Vararg{Any}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:394 [18] BottomRF @ ./reduce.jl:84 [inlined] [19] MappingRF @ ./reduce.jl:98 [inlined] [20] _foldl_impl @ ./reduce.jl:60 [inlined] [21] foldl_impl @ ./reduce.jl:46 [inlined] [22] mapfoldl_impl @ ./reduce.jl:42 [inlined] [23] _mapreduce_dim @ ./reducedim.jl:335 [inlined] [24] mapreduce @ ./reducedim.jl:330 [inlined] [25] hom_map(F::Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}}, path::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:394 [26] top-level scope @ ~/.julia/packages/Catlab/1srGD/test/categorical_algebra/FinCats.jl:529 [27] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:738 [inlined] Categories: Error During Test at /home/pkgeval/.julia/packages/Catlab/1srGD/test/categorical_algebra/FinCats.jl:77 Test threw exception Expression: F ⋅ G == FinFunctor([1, 5], [[1, 2, 3, 4]], C, E) MethodError: no method matching has_part(::Catlab.Graphs.BasicGraphs.Graph, ::Symbol, ::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{0, Int64}}) The function `has_part` exists, but no method is defined for this combination of argument types. Closest candidates are: has_part(::Any, ::Symbol, !Matched::Int64) @ ACSets ~/.julia/packages/ACSets/arYE8/src/ACSetInterface.jl:102 has_part(::Any, ::Symbol, !Matched::AbstractVector{Int64}) @ ACSets ~/.julia/packages/ACSets/arYE8/src/ACSetInterface.jl:103 has_part(::ACSets.DenseACSets.StructACSet{S}, ::Symbol) where S @ ACSets ~/.julia/packages/ACSets/arYE8/src/DenseACSets.jl:467 ... Stacktrace: [1] has_edge(g::Catlab.Graphs.BasicGraphs.Graph, e::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{0, Int64}}) @ Catlab.Graphs.BasicGraphs ~/.julia/packages/Catlab/1srGD/src/graphs/BasicGraphs.jl:124 [2] (::Catlab.CategoricalAlgebra.FinCats.var"#Path##0#Path##1"{Catlab.Graphs.BasicGraphs.Graph})(e::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{0, Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:187 [3] _all @ ./anyall.jl:211 [inlined] [4] all @ ./reducedim.jl:996 [inlined] [5] Catlab.CategoricalAlgebra.FinCats.Path(g::Catlab.Graphs.BasicGraphs.Graph, es::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:187 [6] coerce_path(g::Catlab.Graphs.BasicGraphs.Graph, x::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:233 [7] (::Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}})(f::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ./none:-1 [8] MappingRF @ ./reduce.jl:98 [inlined] [9] afoldl(::Base.MappingRF{Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}, Base.BottomRF{typeof(vcat)}}, ::Base._InitialValue, ::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, ::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}) @ Base ./operators.jl:600 [10] _foldl_impl(op::Base.MappingRF{Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}, Base.BottomRF{typeof(vcat)}}, init::Base._InitialValue, itr::Tuple{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}) @ Base ./reduce.jl:66 [11] foldl_impl(op::Base.MappingRF{Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}, Base.BottomRF{typeof(vcat)}}, nt::Base._InitialValue, itr::Tuple{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}) @ Base ./reduce.jl:46 [12] mapfoldl_impl(f::typeof(identity), op::typeof(vcat), nt::Base._InitialValue, itr::Base.Generator{Tuple{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}, Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}}) @ Base ./reduce.jl:42 [13] mapfoldl(f::Function, op::Function, itr::Base.Generator{Tuple{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}, Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}}; init::Base._InitialValue) @ Base ./reduce.jl:173 [14] mapreduce(f::Function, op::Function, itr::Base.Generator{Tuple{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}, Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}}; kw::@Kwargs{}) @ Base ./reduce.jl:305 [15] reduce(op::Function, itr::Base.Generator{Tuple{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}, Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}}; kw::@Kwargs{}) @ Base ./reduce.jl:489 [16] compose(::Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, ::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, ::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:227 [17] (::Catlab.CategoricalAlgebra.FinCats.var"#hom_map##2#hom_map##3"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}})(::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, ::Vararg{Any}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:394 [18] BottomRF @ ./reduce.jl:84 [inlined] [19] MappingRF @ ./reduce.jl:98 [inlined] [20] _foldl_impl @ ./reduce.jl:60 [inlined] [21] foldl_impl @ ./reduce.jl:46 [inlined] [22] mapfoldl_impl @ ./reduce.jl:42 [inlined] [23] _mapreduce_dim @ ./reducedim.jl:335 [inlined] [24] mapreduce @ ./reducedim.jl:330 [inlined] [25] hom_map(F::Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}}, path::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:394 [26] #44 @ ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:556 [inlined] [27] iterate @ ./generator.jl:48 [inlined] [28] _collect(c::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}, itr::Base.Generator{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}, Catlab.CategoricalAlgebra.FinCats.var"#44#45"{Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}}}}, ::Base.EltypeUnknown, isz::Base.HasShape{1}) @ Base ./array.jl:816 [29] collect_similar @ ./array.jl:738 [inlined] [30] map @ ./abstractarray.jl:3386 [inlined] [31] #mapvals#80 @ ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:790 [inlined] [32] mapvals @ ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:785 [inlined] [33] do_compose(F::Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}}, G::Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:555 [34] compose_id @ ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/Categories.jl:310 [inlined] [35] macro expansion @ ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/Categories.jl:286 [inlined] [36] #compose#5 @ ./none:0 [inlined] [37] compose @ ./none:-1 [inlined] [38] ⋅(703::Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}}, 704::Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}}) @ Catlab.CategoricalAlgebra.Categories ./none:-1 [39] top-level scope @ ~/.julia/packages/Catlab/1srGD/test/categorical_algebra/FinCats.jl:529 [40] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:738 [inlined] WARNING: Detected access to binding `TestACSetsGATsInterop.Dendrogram` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestCSets.DDS` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestCSets.SetAttr` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestCSets.VELabeledGraph` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestCSets.A2` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestCSets.AbsMADGraph` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestCSets.Petri` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestHomSearch.SetAttr` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestHomSearch.##LSet#284` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestHomSearch.DDS` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestHomSearch.VELabeledGraph` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. CSets: Test Failed at /home/pkgeval/.julia/packages/Catlab/1srGD/test/categorical_algebra/HomSearch.jl:368 Expression: first(first(maximum_common_subobject(g1, g2; abstract = false))) == exp Evaluated: Catlab.Graphs.BasicGraphs.WeightedGraph{Bool}: V = 1:3 E = 1:1 Weight = 1:0 src : E → V = [2] tgt : E → V = [3] weight : E → Weight = Bool[0] == Catlab.Graphs.BasicGraphs.WeightedGraph{Bool}: V = 1:3 E = 1:1 Weight = 1:0 src : E → V = [1] tgt : E → V = [2] weight : E → Weight = Bool[0] Stacktrace: [1] top-level scope @ ~/.julia/packages/Catlab/1srGD/test/categorical_algebra/HomSearch.jl:529 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:741 [inlined] [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [4] top-level scope @ ~/.julia/packages/Catlab/1srGD/test/categorical_algebra/CategoricalAlgebra.jl:36 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1858 [inlined] [6] macro expansion @ ~/.julia/packages/Catlab/1srGD/test/categorical_algebra/CategoricalAlgebra.jl:38 [inlined] WARNING: Detected access to binding `TestHomSearch.AbsMADGraph` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestCatElements.Petri` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. Diagrams: Error During Test at /home/pkgeval/.julia/packages/Catlab/1srGD/test/categorical_algebra/CategoricalAlgebra.jl:42 Got exception outside of a @test LoadError: MethodError: no method matching has_part(::Catlab.Graphs.BasicGraphs.Graph, ::Symbol, ::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{0, Int64}}) The function `has_part` exists, but no method is defined for this combination of argument types. Closest candidates are: has_part(::Any, ::Symbol, !Matched::Int64) @ ACSets ~/.julia/packages/ACSets/arYE8/src/ACSetInterface.jl:102 has_part(::Any, ::Symbol, !Matched::AbstractVector{Int64}) @ ACSets ~/.julia/packages/ACSets/arYE8/src/ACSetInterface.jl:103 has_part(::ACSets.DenseACSets.StructACSet{S}, ::Symbol) where S @ ACSets ~/.julia/packages/ACSets/arYE8/src/DenseACSets.jl:467 ... Stacktrace: [1] has_edge(g::Catlab.Graphs.BasicGraphs.Graph, e::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{0, Int64}}) @ Catlab.Graphs.BasicGraphs ~/.julia/packages/Catlab/1srGD/src/graphs/BasicGraphs.jl:124 [2] (::Catlab.CategoricalAlgebra.FinCats.var"#Path##0#Path##1"{Catlab.Graphs.BasicGraphs.Graph})(e::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{0, Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:187 [3] _all @ ./anyall.jl:211 [inlined] [4] all @ ./reducedim.jl:996 [inlined] [5] Catlab.CategoricalAlgebra.FinCats.Path(g::Catlab.Graphs.BasicGraphs.Graph, es::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:187 [6] coerce_path(g::Catlab.Graphs.BasicGraphs.Graph, x::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:233 [7] hom(C::Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, f::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:230 [8] (::Catlab.CategoricalAlgebra.FinCats.var"#FinDomFunctor##10#FinDomFunctor##11"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}})(g::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:512 [9] iterate @ ./generator.jl:48 [inlined] [10] _collect @ ./array.jl:816 [inlined] [11] collect_similar @ ./array.jl:738 [inlined] [12] map @ ./abstractarray.jl:3386 [inlined] [13] mappairs @ ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:772 [inlined] [14] Functor @ ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:512 [inlined] [15] do_compose(F::Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{1, Int64}}}}, G::Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{1, Int64}}}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:555 [16] compose_id @ ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/Categories.jl:310 [inlined] [17] macro expansion @ ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/Categories.jl:286 [inlined] [18] #compose#5 @ ./none:0 [inlined] [19] compose @ ./none:-1 [inlined] [20] ⋅ @ ./none:-1 [inlined] [21] compose(f::Catlab.CategoricalAlgebra.Diagrams.SimpleDiagramHom{AlgebraicInterfaces.id, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{1, Int64}}}}, Catlab.CategoricalAlgebra.FinCats.FinTransformationMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Vector{Catlab.Theories.FreeSchema.Ob{:generator}}, Vector{Catlab.Theories.FreeSchema.Hom{:generator}}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Vector{Catlab.Theories.FreeSchema.Ob{:generator}}, Vector{Catlab.Theories.FreeSchema.Hom{:generator}}}, Vector{Catlab.Theories.FreeSchema.Hom}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Vector{Catlab.Theories.FreeSchema.Ob{:generator}}, Vector{Catlab.Theories.FreeSchema.Hom{:generator}}}}, g::Catlab.CategoricalAlgebra.Diagrams.SimpleDiagramHom{AlgebraicInterfaces.id, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{1, Int64}}}}, Catlab.CategoricalAlgebra.FinCats.FinTransformationMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Vector{Catlab.Theories.FreeSchema.Ob{:generator}}, Vector{Catlab.Theories.FreeSchema.Hom{:generator}}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Vector{Catlab.Theories.FreeSchema.Ob{:generator}}, Vector{Catlab.Theories.FreeSchema.Hom{:generator}}}, Vector{Catlab.Theories.FreeSchema.Hom}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Vector{Catlab.Theories.FreeSchema.Ob{:generator}}, Vector{Catlab.Theories.FreeSchema.Hom{:generator}}}}) @ Catlab.CategoricalAlgebra.Diagrams ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/Diagrams.jl:194 [22] ⋅(808::Catlab.CategoricalAlgebra.Diagrams.SimpleDiagramHom{AlgebraicInterfaces.id, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{1, Int64}}}}, Catlab.CategoricalAlgebra.FinCats.FinTransformationMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Vector{Catlab.Theories.FreeSchema.Ob{:generator}}, Vector{Catlab.Theories.FreeSchema.Hom{:generator}}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Vector{Catlab.Theories.FreeSchema.Ob{:generator}}, Vector{Catlab.Theories.FreeSchema.Hom{:generator}}}, Vector{Catlab.Theories.FreeSchema.Hom}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Vector{Catlab.Theories.FreeSchema.Ob{:generator}}, Vector{Catlab.Theories.FreeSchema.Hom{:generator}}}}, 809::Catlab.CategoricalAlgebra.Diagrams.SimpleDiagramHom{AlgebraicInterfaces.id, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{1, Int64}}}}, Catlab.CategoricalAlgebra.FinCats.FinTransformationMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Vector{Catlab.Theories.FreeSchema.Ob{:generator}}, Vector{Catlab.Theories.FreeSchema.Hom{:generator}}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Vector{Catlab.Theories.FreeSchema.Ob{:generator}}, Vector{Catlab.Theories.FreeSchema.Hom{:generator}}}, Vector{Catlab.Theories.FreeSchema.Hom}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Vector{Catlab.Theories.FreeSchema.Ob{:generator}}, Vector{Catlab.Theories.FreeSchema.Hom{:generator}}}}) @ Catlab.CategoricalAlgebra.Diagrams ./none:-1 [23] top-level scope @ ~/.julia/packages/Catlab/1srGD/test/categorical_algebra/Diagrams.jl:49 [24] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [25] top-level scope @ ~/.julia/packages/Catlab/1srGD/test/categorical_algebra/CategoricalAlgebra.jl:43 [26] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1858 [inlined] [27] macro expansion @ ~/.julia/packages/Catlab/1srGD/test/categorical_algebra/CategoricalAlgebra.jl:43 [inlined] [28] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [29] top-level scope @ ~/.julia/packages/Catlab/1srGD/test/runtests.jl:8 [30] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1858 [inlined] [31] macro expansion @ ~/.julia/packages/Catlab/1srGD/test/runtests.jl:8 [inlined] [32] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [33] top-level scope @ none:6 [34] eval(m::Module, e::Any) @ Core ./boot.jl:489 [35] exec_options(opts::Base.JLOptions) @ Base ./client.jl:286 [36] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/Catlab/1srGD/test/categorical_algebra/Diagrams.jl:1 WARNING: Detected access to binding `TestChase.School` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestChase.Loop` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestFunctorialDataMigrations.AcsetSet` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestFunctorialDataMigrations.DDS` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestFunctorialDataMigrations.LabeledDDS` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestFunctorialDataMigrations.Thing1WithProp` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestFunctorialDataMigrations.Thing2WithProp` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestFunctorialDataMigrations.WG` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestFunctorialDataMigrations.DDS42` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestStructuredCospans.VELabeledGraph` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestStructuredCospans.WeightedLabeledGraph` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestStructuredCospans.Weighted2DGlobularSet` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 43 running 1 of 1 signal (10): User defined signal 1 jl_to_typeof at /source/src/julia.h:966 [inlined] ijl_types_equal at /source/src/subtype.c:2325 jl_specializations_get_linfo_ at /source/src/gf.c:237 #specialize_method#9 at ./runtime_internals.jl:1786 [inlined] specialize_method at ./runtime_internals.jl:1773 [inlined] typeinf_edge at ./../usr/share/julia/Compiler/src/typeinfer.jl:1029 abstract_call_method at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:735 infercalls at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:167 abstract_call_gf_by_type at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:338 abstract_call_known at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:2796 abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:2903 abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:2896 [inlined] abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3056 abstract_eval_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3074 [inlined] abstract_eval_statement_expr at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3430 abstract_eval_basic_statement at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3805 [inlined] abstract_eval_basic_statement at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3762 [inlined] typeinf_local at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4311 jfptr_typeinf_local_81573.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 typeinf at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4469 typeinf_ext at ./../usr/share/julia/Compiler/src/typeinfer.jl:1378 typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1561 [inlined] typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1570 jfptr_typeinf_ext_toplevel_84463.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] jl_type_infer at /source/src/gf.c:462 jl_compile_method_internal at /source/src/gf.c:3306 _jl_invoke at /source/src/gf.c:3799 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_eval_module_expr at /source/src/toplevel.c:196 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:658 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 _include at ./loading.jl:2908 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_56592.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_eval_module_expr at /source/src/toplevel.c:196 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:658 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 _include at ./loading.jl:2908 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_56592.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 _include at ./loading.jl:2908 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_56592.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 exec_options at ./client.jl:286 _start at ./client.jl:553 jfptr__start_63823.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x70a4bcdbd249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_47924.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000079fd84e01870 Total snapshots: 467. Utilization: 0% ╎467 @Base/task.jl:1129 wait_forever() 466╎ 467 @Base/task.jl:1192 wait() [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_47924.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 19677624 (Pool: 19677119; Big: 505); GC: 18 [43] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/Catlab/1srGD/test/categorical_algebra/StructuredCospans.jl:210 _ZN4llvm23MemoryDependenceResults30getSimplePointerDependencyFromERKNS_14MemoryLocationEbNS_21ilist_iterator_w_bitsINS_12ilist_detail12node_optionsINS_11InstructionELb1ELb0EvLb1ENS_10BasicBlockEEELb0ELb0EEEPS8_PS7_PjRNS_14BatchAAResultsE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm23MemoryDependenceResults24getPointerDependencyFromERKNS_14MemoryLocationEbNS_21ilist_iterator_w_bitsINS_12ilist_detail12node_optionsINS_11InstructionELb1ELb0EvLb1ENS_10BasicBlockEEELb0ELb0EEEPS8_PS7_PjRNS_14BatchAAResultsE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm23MemoryDependenceResults23getNonLocalInfoForBlockEPNS_11InstructionERKNS_14MemoryLocationEbPNS_10BasicBlockEPSt6vectorINS_16NonLocalDepEntryESaIS9_EEjRNS_14BatchAAResultsE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm23MemoryDependenceResults27getNonLocalPointerDepFromBBEPNS_11InstructionERKNS_12PHITransAddrERKNS_14MemoryLocationEbPNS_10BasicBlockERNS_15SmallVectorImplINS_17NonLocalDepResultEEERNS_13SmallDenseMapISA_PNS_5ValueELj16ENS_12DenseMapInfoISA_vEENS_6detail12DenseMapPairISA_SH_EEEEbb at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm23MemoryDependenceResults27getNonLocalPointerDepFromBBEPNS_11InstructionERKNS_12PHITransAddrERKNS_14MemoryLocationEbPNS_10BasicBlockERNS_15SmallVectorImplINS_17NonLocalDepResultEEERNS_13SmallDenseMapISA_PNS_5ValueELj16ENS_12DenseMapInfoISA_vEENS_6detail12DenseMapPairISA_SH_EEEEbb at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm23MemoryDependenceResults28getNonLocalPointerDependencyEPNS_11InstructionERNS_15SmallVectorImplINS_17NonLocalDepResultEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm7GVNPass19processNonLocalLoadEPNS_8LoadInstE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm7GVNPass18processInstructionEPNS_11InstructionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm7GVNPass12processBlockEPNS_10BasicBlockE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm7GVNPass17iterateOnFunctionERNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm7GVNPass7runImplERNS_8FunctionERNS_15AssumptionCacheERNS_13DominatorTreeERKNS_17TargetLibraryInfoERNS_9AAResultsEPNS_23MemoryDependenceResultsERNS_8LoopInfoEPNS_25OptimizationRemarkEmitterEPNS_9MemorySSAE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm7GVNPass3runERNS_8FunctionERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm11PassManagerINS_8FunctionENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm27ModuleToFunctionPassAdaptor3runERNS_6ModuleERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm11PassManagerINS_6ModuleENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/src/pipeline.cpp:791 operator() at /source/src/jitlayers.cpp:1511 withModuleDo<(anonymous namespace)::sizedOptimizerT::operator()(llvm::orc::ThreadSafeModule) [with long unsigned int N = 4]:: > at /source/usr/include/llvm/ExecutionEngine/Orc/ThreadSafeModule.h:136 [inlined] operator() at /source/src/jitlayers.cpp:1472 [inlined] operator() at /source/src/jitlayers.cpp:1624 [inlined] addModule at /source/src/jitlayers.cpp:2081 jl_compile_codeinst_now at /source/src/jitlayers.cpp:685 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:876 jl_compile_method_internal at /source/src/gf.c:3319 _jl_invoke at /source/src/gf.c:3799 [inlined] ijl_apply_generic at /source/src/gf.c:4004 #pack_colimit#131 at /home/pkgeval/.julia/packages/Catlab/1srGD/src/categorical_algebra/CSets.jl:985 unknown function (ip: 0x70a44bd9d399) at (unknown file) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 pack_colimit at /home/pkgeval/.julia/packages/Catlab/1srGD/src/categorical_algebra/CSets.jl:979 unknown function (ip: 0x70a44bd9690e) at (unknown file) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 colimit at /home/pkgeval/.julia/packages/Catlab/1srGD/src/categorical_algebra/CSets.jl:946 #colimit#3 at /home/pkgeval/.julia/packages/Catlab/1srGD/src/categorical_algebra/Limits.jl:144 [inlined] colimit at /home/pkgeval/.julia/packages/Catlab/1srGD/src/categorical_algebra/Limits.jl:144 [inlined] #pushout#17 at /home/pkgeval/.julia/packages/Catlab/1srGD/src/categorical_algebra/Limits.jl:237 [inlined] pushout at /home/pkgeval/.julia/packages/Catlab/1srGD/src/categorical_algebra/Limits.jl:237 [inlined] compose at /home/pkgeval/.julia/packages/Catlab/1srGD/src/categorical_algebra/StructuredCospans.jl:124 unknown function (ip: 0x70a44bd85fd2) at (unknown file) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_eval_module_expr at /source/src/toplevel.c:196 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:658 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 _include at ./loading.jl:2908 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_56592.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_eval_module_expr at /source/src/toplevel.c:196 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:658 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 _include at ./loading.jl:2908 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_56592.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 _include at ./loading.jl:2908 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_56592.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 exec_options at ./client.jl:286 _start at ./client.jl:553 jfptr__start_63823.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x70a4bcdbd249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) Allocations: 1070705249 (Pool: 1070694881; Big: 10368); GC: 453 PkgEval terminated after 2738.01s: test duration exceeded the time limit