Package evaluation of StochasticGene on Julia 1.13.0-DEV.873 (be59b3b2f4*) started at 2025-07-18T09:19:15.018 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.76s ################################################################################ # Installation # Installing StochasticGene... Resolving package versions... Installed MKL_jll ───────────────────────────── v2025.0.1+1 Installed CommonWorldInvalidations ──────────── v1.0.0 Installed FastPower ─────────────────────────── v1.1.3 Installed InlineStrings ─────────────────────── v1.4.4 Installed OrderedCollections ────────────────── v1.8.1 Installed SIMDTypes ─────────────────────────── v0.1.0 Installed MultivariateStats ─────────────────── v0.10.3 Installed OrdinaryDiffEqRosenbrock ──────────── v1.11.0 Installed OrdinaryDiffEqExponentialRK ───────── v1.4.0 Installed NonlinearSolveSpectralMethods ─────── v1.2.0 Installed EnzymeCore ────────────────────────── v0.8.12 Installed PreallocationTools ────────────────── v0.4.29 Installed CpuId ─────────────────────────────── v0.3.1 Installed Optim ─────────────────────────────── v1.13.2 Installed OrdinaryDiffEqFIRK ────────────────── v1.12.0 Installed SentinelArrays ────────────────────── v1.4.8 Installed NaNMath ───────────────────────────── v1.1.3 Installed StaticArrayInterface ──────────────── v1.8.0 Installed QuadGK ────────────────────────────── v2.11.2 Installed Compiler ──────────────────────────── v0.1.1 Installed OpenSpecFun_jll ───────────────────── v0.5.6+0 Installed OrdinaryDiffEqQPRK ────────────────── v1.1.0 Installed FastBroadcast ─────────────────────── v0.3.5 Installed NonlinearSolveBase ────────────────── v1.12.0 Installed LoweredCodeUtils ──────────────────── v3.4.2 Installed Tables ────────────────────────────── v1.12.1 Installed Arpack ────────────────────────────── v0.5.4 Installed Revise ────────────────────────────── v3.8.0 Installed EnumX ─────────────────────────────── v1.0.5 Installed LinearSolve ───────────────────────── v3.19.2 Installed NLSolversBase ─────────────────────── v7.10.0 Installed BracketingNonlinearSolve ──────────── v1.3.0 Installed OrdinaryDiffEqLowOrderRK ──────────── v1.2.0 Installed Reexport ──────────────────────────── v1.2.2 Installed InverseFunctions ──────────────────── v0.1.17 Installed Jieko ─────────────────────────────── v0.2.1 Installed DiffEqBase ────────────────────────── v6.177.2 Installed Preferences ───────────────────────── v1.4.3 Installed Missings ──────────────────────────── v1.2.0 Installed Static ────────────────────────────── v1.2.0 Installed TableTraits ───────────────────────── v1.0.1 Installed LaTeXStrings ──────────────────────── v1.4.0 Installed MaybeInplace ──────────────────────── v0.1.4 Installed NonlinearSolve ────────────────────── v4.10.0 Installed OrdinaryDiffEqNordsieck ───────────── v1.1.0 Installed OrdinaryDiffEqAdamsBashforthMoulton ─ v1.2.0 Installed Crayons ───────────────────────────── v4.1.1 Installed OrdinaryDiffEqLinear ──────────────── v1.3.0 Installed UnPack ────────────────────────────── v1.0.2 Installed SortingAlgorithms ─────────────────── v1.2.1 Installed RecursiveArrayTools ───────────────── v3.34.1 Installed ADTypes ───────────────────────────── v1.15.0 Installed MacroTools ────────────────────────── v0.5.16 Installed DiffResults ───────────────────────── v1.1.0 Installed ManualMemory ──────────────────────── v0.1.8 Installed DataStructures ────────────────────── v0.18.22 Installed GenericSchur ──────────────────────── v0.5.5 Installed FillArrays ────────────────────────── v1.13.0 Installed SparseMatrixColorings ─────────────── v0.4.21 Installed oneTBB_jll ────────────────────────── v2022.0.0+0 Installed DelimitedFiles ────────────────────── v1.9.1 Installed CodecZlib ─────────────────────────── v0.7.8 Installed SciMLJacobianOperators ────────────── v0.1.6 Installed ExprTools ─────────────────────────── v0.1.10 Installed ArrayInterface ────────────────────── v7.19.0 Installed StatsBase ─────────────────────────── v0.34.5 Installed IntelOpenMP_jll ───────────────────── v2025.0.4+0 Installed DataValueInterfaces ───────────────── v1.0.0 Installed CommonSubexpressions ──────────────── v0.3.1 Installed TruncatedStacktraces ──────────────── v1.4.0 Installed LayoutPointers ────────────────────── v0.1.17 Installed ConcreteStructs ───────────────────── v0.2.3 Installed GPUArraysCore ─────────────────────── v0.2.0 Installed IrrationalConstants ───────────────── v0.2.4 Installed ArrayLayouts ──────────────────────── v1.11.1 Installed OrdinaryDiffEqStabilizedIRK ───────── v1.3.0 Installed OrdinaryDiffEqRKN ─────────────────── v1.1.0 Installed OrdinaryDiffEqExtrapolation ───────── v1.5.0 Installed Setfield ──────────────────────────── v1.1.2 Installed PooledArrays ──────────────────────── v1.4.3 Installed LSODA_jll ─────────────────────────── v0.1.2+0 Installed OrdinaryDiffEqPRK ─────────────────── v1.1.0 Installed NonlinearSolveQuasiNewton ─────────── v1.6.0 Installed WorkerUtilities ───────────────────── v1.6.1 Installed PDMats ────────────────────────────── v0.11.35 Installed DocStringExtensions ───────────────── v0.9.5 Installed OrdinaryDiffEqHighOrderRK ─────────── v1.1.0 Installed CompositionsBase ──────────────────── v0.1.2 Installed CommonSolve ───────────────────────── v0.2.4 Installed Moshi ─────────────────────────────── v0.3.7 Installed ZMQ ───────────────────────────────── v1.4.1 Installed ForwardDiff ───────────────────────── v1.0.1 Installed DifferentiationInterface ──────────── v0.7.3 Installed Rmath_jll ─────────────────────────── v0.5.1+0 Installed VersionParsing ────────────────────── v1.3.0 Installed SimpleUnPack ──────────────────────── v1.1.0 Installed BitTwiddlingConvenienceFunctions ──── v0.1.6 Installed AliasTables ───────────────────────── v1.1.3 Installed IteratorInterfaceExtensions ───────── v1.0.0 Installed LineSearch ────────────────────────── v0.1.4 Installed RecipesBase ───────────────────────── v1.3.4 Installed FunctionWrappersWrappers ──────────── v0.1.3 Installed OrdinaryDiffEqStabilizedRK ────────── v1.1.2 Installed Krylov ────────────────────────────── v0.10.1 Installed DataAPI ───────────────────────────── v1.16.0 Installed InvertedIndices ───────────────────── v1.3.1 Installed SciMLOperators ────────────────────── v1.3.1 Installed OrdinaryDiffEqBDF ─────────────────── v1.6.0 Installed OrdinaryDiffEqSymplecticRK ────────── v1.3.0 Installed Conda ─────────────────────────────── v1.10.2 Installed SciMLStructures ───────────────────── v1.7.0 Installed StaticArrays ──────────────────────── v1.9.14 Installed StaticArraysCore ──────────────────── v1.4.3 Installed FastGaussQuadrature ───────────────── v1.0.2 Installed OrdinaryDiffEq ────────────────────── v6.99.0 Installed CodeTracking ──────────────────────── v1.3.9 Installed AbstractFFTs ──────────────────────── v1.5.0 Installed OrdinaryDiffEqLowStorageRK ────────── v1.3.0 Installed OrdinaryDiffEqDifferentiation ─────── v1.10.0 Installed Requires ──────────────────────────── v1.3.1 Installed StringManipulation ────────────────── v0.4.1 Installed LSODA ─────────────────────────────── v0.7.5 Installed FunctionWrappers ──────────────────── v1.1.3 Installed OrdinaryDiffEqNonlinearSolve ──────── v1.10.0 Installed DiffRules ─────────────────────────── v1.15.1 Installed LogExpFunctions ───────────────────── v0.3.29 Installed PrettyTables ──────────────────────── v2.4.0 Installed SciMLBase ─────────────────────────── v2.103.1 Installed OrdinaryDiffEqCore ────────────────── v1.26.2 Installed JuliaInterpreter ──────────────────── v0.10.3 Installed Parsers ───────────────────────────── v2.8.3 Installed JSON ──────────────────────────────── v0.21.4 Installed NonlinearSolveFirstOrder ──────────── v1.5.0 Installed Distributions ─────────────────────── v0.25.120 Installed Rmath ─────────────────────────────── v0.8.0 Installed OrdinaryDiffEqExplicitRK ──────────── v1.1.0 Installed FastClosures ──────────────────────── v0.3.2 Installed FiniteDiff ────────────────────────── v2.27.0 Installed CSV ───────────────────────────────── v0.10.15 Installed Arpack_jll ────────────────────────── v3.5.1+1 Installed libsodium_jll ─────────────────────── v1.0.21+0 Installed ZeroMQ_jll ────────────────────────── v4.3.6+0 Installed CloseOpenIntervals ────────────────── v0.1.13 Installed Polyester ─────────────────────────── v0.7.18 Installed StatsFuns ─────────────────────────── v1.5.0 Installed OrdinaryDiffEqFeagin ──────────────── v1.1.0 Installed IJulia ────────────────────────────── v1.29.0 Installed OrdinaryDiffEqIMEXMultistep ───────── v1.3.0 Installed WeakRefStrings ────────────────────── v1.4.2 Installed OrdinaryDiffEqSSPRK ───────────────── v1.3.0 Installed OrdinaryDiffEqPDIRK ───────────────── v1.3.1 Installed JLLWrappers ───────────────────────── v1.7.0 Installed ThreadingUtilities ────────────────── v0.5.5 Installed OrdinaryDiffEqSDIRK ───────────────── v1.3.0 Installed Accessors ─────────────────────────── v0.1.42 Installed DataFrames ────────────────────────── v1.7.0 Installed OrdinaryDiffEqDefault ─────────────── v1.5.0 Installed Adapt ─────────────────────────────── v4.3.0 Installed OrdinaryDiffEqVerner ──────────────── v1.2.0 Installed FilePathsBase ─────────────────────── v0.9.24 Installed ExponentialUtilities ──────────────── v1.27.0 Installed RuntimeGeneratedFunctions ─────────── v0.5.15 Installed ConstructionBase ──────────────────── v1.6.0 Installed HypergeometricFunctions ───────────── v0.3.28 Installed PositiveFactorizations ────────────── v0.2.4 Installed SymbolicIndexingInterface ─────────── v0.3.41 Installed Compat ────────────────────────────── v4.17.0 Installed StrideArraysCore ──────────────────── v0.5.7 Installed Statistics ────────────────────────── v1.11.1 Installed TranscodingStreams ────────────────── v0.11.3 Installed StatsAPI ──────────────────────────── v1.7.1 Installed TimerOutputs ──────────────────────── v0.5.29 Installed MbedTLS ───────────────────────────── v1.1.9 Installed LazyArrays ────────────────────────── v2.6.1 Installed ExproniconLite ────────────────────── v0.10.14 Installed PrecompileTools ───────────────────── v1.3.2 Installed ChainRulesCore ────────────────────── v1.25.2 Installed CPUSummary ────────────────────────── v0.2.6 Installed Parameters ────────────────────────── v0.12.3 Installed IfElse ────────────────────────────── v0.1.1 Installed SoftGlobalScope ───────────────────── v1.1.0 Installed MuladdMacro ───────────────────────── v0.2.4 Installed PtrArrays ─────────────────────────── v1.3.0 Installed SpecialFunctions ──────────────────── v2.5.1 Installed SimpleNonlinearSolve ──────────────── v2.5.0 Installed FFTW_jll ──────────────────────────── v3.3.11+0 Installed MbedTLS_jll ───────────────────────── v2.28.6+2 Installed FFTW ──────────────────────────────── v1.9.0 Installed OrdinaryDiffEqFunctionMap ─────────── v1.1.1 Installed OrdinaryDiffEqTsit5 ───────────────── v1.1.0 Installed PolyesterWeave ────────────────────── v0.2.2 Installed LineSearches ──────────────────────── v7.4.0 Installed StochasticGene ────────────────────── v1.5.9 Installing 9 artifacts Installed artifact OpenSpecFun 194.9 KiB Installed artifact Rmath 121.9 KiB Installed artifact LSODA 24.9 KiB Installed artifact oneTBB 435.6 KiB Installed artifact Arpack 147.2 KiB Installed artifact ZeroMQ 316.1 KiB Installed artifact libsodium 1.6 MiB Installed artifact FFTW 2.2 MiB Installed artifact MbedTLS 2.1 MiB Updating `~/.julia/environments/v1.13/Project.toml` [a2598c62] + StochasticGene v1.5.9 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.15.0 [621f4979] + AbstractFFTs v1.5.0 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [7d9fca2a] + Arpack v0.5.4 [4fba245c] + ArrayInterface v7.19.0 [4c555306] + ArrayLayouts v1.11.1 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] + BracketingNonlinearSolve v1.3.0 [2a0fbf3d] + CPUSummary v0.2.6 [336ed68f] + CSV v0.10.15 [d360d2e6] + ChainRulesCore v1.25.2 [fb6a15b2] + CloseOpenIntervals v0.1.13 [da1fd8a2] + CodeTracking v1.3.9 [944b1d66] + CodecZlib v0.7.8 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.17.0 [807dbc54] + Compiler v0.1.1 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [8f4d0f93] + Conda v1.10.2 [187b0558] + ConstructionBase v1.6.0 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.7.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [2b5f629d] + DiffEqBase v6.177.2 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.3 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [f151be2c] + EnzymeCore v0.8.12 [d4d017d3] + ExponentialUtilities v1.27.0 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [7a1cc6ca] + FFTW v1.9.0 [7034ab61] + FastBroadcast v0.3.5 [9aa1b823] + FastClosures v0.3.2 [442a2c76] + FastGaussQuadrature v1.0.2 [a4df4552] + FastPower v1.1.3 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [f6369f11] + ForwardDiff v1.0.1 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [46192b85] + GPUArraysCore v0.2.0 [c145ed77] + GenericSchur v0.5.5 [34004b35] + HypergeometricFunctions v0.3.28 [7073ff75] + IJulia v1.29.0 [615f187c] + IfElse v0.1.1 [842dd82b] + InlineStrings v1.4.4 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] + JSON v0.21.4 [ae98c720] + Jieko v0.2.1 [aa1ae85d] + JuliaInterpreter v0.10.3 [ba0b0d4f] + Krylov v0.10.1 [7f56f5a3] + LSODA v0.7.5 [b964fa9f] + LaTeXStrings v1.4.0 [10f19ff3] + LayoutPointers v0.1.17 [5078a376] + LazyArrays v2.6.1 [87fe0de2] + LineSearch v0.1.4 [d3d80556] + LineSearches v7.4.0 [7ed4a6bd] + LinearSolve v3.19.2 [2ab3a3ac] + LogExpFunctions v0.3.29 [6f1432cf] + LoweredCodeUtils v3.4.2 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [bb5d69b7] + MaybeInplace v0.1.4 [739be429] + MbedTLS v1.1.9 [e1d29d7a] + Missings v1.2.0 [2e0e35c7] + Moshi v0.3.7 [46d2c3a1] + MuladdMacro v0.2.4 [6f286f6a] + MultivariateStats v0.10.3 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [8913a72c] + NonlinearSolve v4.10.0 [be0214bd] + NonlinearSolveBase v1.12.0 [5959db7a] + NonlinearSolveFirstOrder v1.5.0 [9a2c21bd] + NonlinearSolveQuasiNewton v1.6.0 [26075421] + NonlinearSolveSpectralMethods v1.2.0 [429524aa] + Optim v1.13.2 [bac558e1] + OrderedCollections v1.8.1 [1dea7af3] + OrdinaryDiffEq v6.99.0 [89bda076] + OrdinaryDiffEqAdamsBashforthMoulton v1.2.0 [6ad6398a] + OrdinaryDiffEqBDF v1.6.0 [bbf590c4] + OrdinaryDiffEqCore v1.26.2 [50262376] + OrdinaryDiffEqDefault v1.5.0 [4302a76b] + OrdinaryDiffEqDifferentiation v1.10.0 [9286f039] + OrdinaryDiffEqExplicitRK v1.1.0 [e0540318] + OrdinaryDiffEqExponentialRK v1.4.0 [becaefa8] + OrdinaryDiffEqExtrapolation v1.5.0 [5960d6e9] + OrdinaryDiffEqFIRK v1.12.0 [101fe9f7] + OrdinaryDiffEqFeagin v1.1.0 [d3585ca7] + OrdinaryDiffEqFunctionMap v1.1.1 [d28bc4f8] + OrdinaryDiffEqHighOrderRK v1.1.0 [9f002381] + OrdinaryDiffEqIMEXMultistep v1.3.0 [521117fe] + OrdinaryDiffEqLinear v1.3.0 [1344f307] + OrdinaryDiffEqLowOrderRK v1.2.0 [b0944070] + OrdinaryDiffEqLowStorageRK v1.3.0 [127b3ac7] + OrdinaryDiffEqNonlinearSolve v1.10.0 [c9986a66] + OrdinaryDiffEqNordsieck v1.1.0 [5dd0a6cf] + OrdinaryDiffEqPDIRK v1.3.1 [5b33eab2] + OrdinaryDiffEqPRK v1.1.0 [04162be5] + OrdinaryDiffEqQPRK v1.1.0 [af6ede74] + OrdinaryDiffEqRKN v1.1.0 [43230ef6] + OrdinaryDiffEqRosenbrock v1.11.0 [2d112036] + OrdinaryDiffEqSDIRK v1.3.0 [669c94d9] + OrdinaryDiffEqSSPRK v1.3.0 [e3e12d00] + OrdinaryDiffEqStabilizedIRK v1.3.0 [358294b1] + OrdinaryDiffEqStabilizedRK v1.1.2 [fa646aed] + OrdinaryDiffEqSymplecticRK v1.3.0 [b1df2697] + OrdinaryDiffEqTsit5 v1.1.0 [79d7bb75] + OrdinaryDiffEqVerner v1.2.0 [90014a1f] + PDMats v0.11.35 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [f517fe37] + Polyester v0.7.18 [1d0040c9] + PolyesterWeave v0.2.2 [2dfb63ee] + PooledArrays v1.4.3 [85a6dd25] + PositiveFactorizations v0.2.4 [d236fae5] + PreallocationTools v0.4.29 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.34.1 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [295af30f] + Revise v3.8.0 [79098fc4] + Rmath v0.8.0 [7e49a35a] + RuntimeGeneratedFunctions v0.5.15 [94e857df] + SIMDTypes v0.1.0 [0bca4576] + SciMLBase v2.103.1 [19f34311] + SciMLJacobianOperators v0.1.6 [c0aeaf25] + SciMLOperators v1.3.1 [53ae85a6] + SciMLStructures v1.7.0 [91c51154] + SentinelArrays v1.4.8 [efcf1570] + Setfield v1.1.2 [727e6d20] + SimpleNonlinearSolve v2.5.0 [ce78b400] + SimpleUnPack v1.1.0 [b85f4697] + SoftGlobalScope v1.1.0 [a2af1166] + SortingAlgorithms v1.2.1 [0a514795] + SparseMatrixColorings v0.4.21 [276daf66] + SpecialFunctions v2.5.1 [aedffcd0] + Static v1.2.0 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.14 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.5 [4c63d2b9] + StatsFuns v1.5.0 [a2598c62] + StochasticGene v1.5.9 [7792a7ef] + StrideArraysCore v0.5.7 [892a3eda] + StringManipulation v0.4.1 [2efcf032] + SymbolicIndexingInterface v0.3.41 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [8290d209] + ThreadingUtilities v0.5.5 [a759f4b9] + TimerOutputs v0.5.29 [3bb67fe8] + TranscodingStreams v0.11.3 [781d530d] + TruncatedStacktraces v1.4.0 [3a884ed6] + UnPack v1.0.2 [81def892] + VersionParsing v1.3.0 [ea10d353] + WeakRefStrings v1.4.2 [76eceee3] + WorkerUtilities v1.6.1 [c2297ded] + ZMQ v1.4.1 ⌅ [68821587] + Arpack_jll v3.5.1+1 [f5851436] + FFTW_jll v3.3.11+0 [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0 [aae0fff6] + LSODA_jll v0.1.2+0 [856f044c] + MKL_jll v2025.0.1+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+2 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [8f1865be] + ZeroMQ_jll v4.3.6+0 [a9144af2] + libsodium_jll v1.0.21+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.14.1+1 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.7.15 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [efcefdf7] + PCRE2_jll v10.45.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building Conda ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b19db3927f0db4151cb86d073689f2428e524576/build.log` Building IJulia → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9e60d328aa8060368d6dadd24b644d0ebaf0c1cb/build.log` Installation completed after 69.33s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4733.8 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 26 already precompiled. Precompiling package dependencies... Precompilation completed after 1903.94s ################################################################################ # Testing # Testing StochasticGene Status `/tmp/jl_Zc7G86/Project.toml` [336ed68f] CSV v0.10.15 [a93c6f00] DataFrames v1.7.0 [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.120 [7a1cc6ca] FFTW v1.9.0 [7073ff75] IJulia v1.29.0 [682c06a0] JSON v0.21.4 [7f56f5a3] LSODA v0.7.5 [6f286f6a] MultivariateStats v0.10.3 [429524aa] Optim v1.13.2 [1dea7af3] OrdinaryDiffEq v6.99.0 [295af30f] Revise v3.8.0 [10745b16] Statistics v1.11.1 [2913bbd2] StatsBase v0.34.5 [a2598c62] StochasticGene v1.5.9 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [37e2e46d] LinearAlgebra v1.12.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_Zc7G86/Manifest.toml` [47edcb42] ADTypes v1.15.0 [621f4979] AbstractFFTs v1.5.0 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [7d9fca2a] Arpack v0.5.4 [4fba245c] ArrayInterface v7.19.0 [4c555306] ArrayLayouts v1.11.1 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] BracketingNonlinearSolve v1.3.0 [2a0fbf3d] CPUSummary v0.2.6 [336ed68f] CSV v0.10.15 [d360d2e6] ChainRulesCore v1.25.2 [fb6a15b2] CloseOpenIntervals v0.1.13 [da1fd8a2] CodeTracking v1.3.9 [944b1d66] CodecZlib v0.7.8 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.17.0 [807dbc54] Compiler v0.1.1 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [8f4d0f93] Conda v1.10.2 [187b0558] ConstructionBase v1.6.0 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.7.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [2b5f629d] DiffEqBase v6.177.2 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.3 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.5 [f151be2c] EnzymeCore v0.8.12 [d4d017d3] ExponentialUtilities v1.27.0 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [7a1cc6ca] FFTW v1.9.0 [7034ab61] FastBroadcast v0.3.5 [9aa1b823] FastClosures v0.3.2 [442a2c76] FastGaussQuadrature v1.0.2 [a4df4552] FastPower v1.1.3 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.13.0 [6a86dc24] FiniteDiff v2.27.0 [f6369f11] ForwardDiff v1.0.1 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 [46192b85] GPUArraysCore v0.2.0 [c145ed77] GenericSchur v0.5.5 [34004b35] HypergeometricFunctions v0.3.28 [7073ff75] IJulia v1.29.0 [615f187c] IfElse v0.1.1 [842dd82b] InlineStrings v1.4.4 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.4 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] 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[669c94d9] OrdinaryDiffEqSSPRK v1.3.0 [e3e12d00] OrdinaryDiffEqStabilizedIRK v1.3.0 [358294b1] OrdinaryDiffEqStabilizedRK v1.1.2 [fa646aed] OrdinaryDiffEqSymplecticRK v1.3.0 [b1df2697] OrdinaryDiffEqTsit5 v1.1.0 [79d7bb75] OrdinaryDiffEqVerner v1.2.0 [90014a1f] PDMats v0.11.35 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [f517fe37] Polyester v0.7.18 [1d0040c9] PolyesterWeave v0.2.2 [2dfb63ee] PooledArrays v1.4.3 [85a6dd25] PositiveFactorizations v0.2.4 [d236fae5] PreallocationTools v0.4.29 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [3cdcf5f2] RecipesBase v1.3.4 [731186ca] RecursiveArrayTools v3.34.1 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [295af30f] Revise v3.8.0 [79098fc4] Rmath v0.8.0 [7e49a35a] RuntimeGeneratedFunctions v0.5.15 [94e857df] SIMDTypes v0.1.0 [0bca4576] SciMLBase v2.103.1 [19f34311] SciMLJacobianOperators v0.1.6 [c0aeaf25] SciMLOperators v1.3.1 [53ae85a6] SciMLStructures v1.7.0 [91c51154] SentinelArrays v1.4.8 [efcf1570] Setfield v1.1.2 [727e6d20] SimpleNonlinearSolve v2.5.0 [ce78b400] SimpleUnPack v1.1.0 [b85f4697] SoftGlobalScope v1.1.0 [a2af1166] SortingAlgorithms v1.2.1 [0a514795] SparseMatrixColorings v0.4.21 [276daf66] SpecialFunctions v2.5.1 [aedffcd0] Static v1.2.0 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.14 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.5 [4c63d2b9] StatsFuns v1.5.0 [a2598c62] StochasticGene v1.5.9 [7792a7ef] StrideArraysCore v0.5.7 [892a3eda] StringManipulation v0.4.1 [2efcf032] SymbolicIndexingInterface v0.3.41 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [8290d209] ThreadingUtilities v0.5.5 [a759f4b9] TimerOutputs v0.5.29 [3bb67fe8] TranscodingStreams v0.11.3 [781d530d] TruncatedStacktraces v1.4.0 [3a884ed6] UnPack v1.0.2 [81def892] VersionParsing v1.3.0 [ea10d353] WeakRefStrings v1.4.2 [76eceee3] WorkerUtilities v1.6.1 [c2297ded] ZMQ v1.4.1 ⌅ [68821587] Arpack_jll v3.5.1+1 [f5851436] FFTW_jll v3.3.11+0 [1d5cc7b8] IntelOpenMP_jll v2025.0.4+0 [aae0fff6] LSODA_jll v0.1.2+0 [856f044c] MKL_jll v2025.0.1+1 [c8ffd9c3] MbedTLS_jll v2.28.6+2 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [8f1865be] ZeroMQ_jll v4.3.6+0 [a9144af2] libsodium_jll v1.0.21+0 [1317d2d5] oneTBB_jll v2022.0.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.14.1+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.7.15 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.1+0 [efcefdf7] PCRE2_jll v10.45.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Sampling Histogram count: 6774.0 Sampling Sampling Sampling ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1383 running 1 of 1 signal (10): User defined signal 1 getindex at ./essentials.jl:967 [inlined] getindex at ./subarray.jl:339 [inlined] searchsortedfirst at ./sort.jl:192 [inlined] searchsortedfirst at ./sort.jl:308 [inlined] #searchsortedfirst#5 at ./sort.jl:310 [inlined] searchsortedfirst at ./sort.jl:310 [inlined] getindex at /source/usr/share/julia/stdlib/v1.13/SparseArrays/src/sparsevector.jl:712 normalized_nullspace at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/chemical_master.jl:290 steady_state at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/chemical_master.jl:25 [inlined] steady_state at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/chemical_master.jl:22 unknown function (ip: 0x701eadba55ea) at (unknown file) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 predictedarray at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/likelihoods.jl:773 unknown function (ip: 0x701e769938c4) at (unknown file) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 predictedarray at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/likelihoods.jl:635 predictedfn at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/likelihoods.jl:548 loglikelihood at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/likelihoods.jl:449 mhstep at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/metropolis_hastings.jl:519 unknown function (ip: 0x701e7699a936) at (unknown file) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 sample at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/metropolis_hastings.jl:426 sample at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/metropolis_hastings.jl:417 unknown function (ip: 0x701e769990d6) at (unknown file) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 metropolis_hastings at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/metropolis_hastings.jl:312 run_mh at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/metropolis_hastings.jl:128 [inlined] run_mh at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/metropolis_hastings.jl:151 #test_fit_rnadwelltime#169 at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/test.jl:243 test_fit_rnadwelltime at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/test.jl:237 unknown function (ip: 0x701e7696b06f) at (unknown file) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 _include at ./loading.jl:2908 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_51466.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 exec_options at ./client.jl:286 _start at ./client.jl:553 jfptr__start_59882.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x701eaef18249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_68198.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x0000794bef5f3760 Total snapshots: 414. Utilization: 0% ╎414 @Base/task.jl:1129 wait_forever() 413╎ 414 @Base/task.jl:1192 wait() [1383] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/test/runtests.jl:11 searchsortedfirst at ./sort.jl:189 [inlined] searchsortedfirst at ./sort.jl:308 [inlined] #searchsortedfirst#5 at ./sort.jl:310 [inlined] searchsortedfirst at ./sort.jl:310 [inlined] getindex at /source/usr/share/julia/stdlib/v1.13/SparseArrays/src/sparsevector.jl:712 normalized_nullspace at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/chemical_master.jl:290 steady_state at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/chemical_master.jl:25 [inlined] steady_state at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/chemical_master.jl:22 unknown function (ip: 0x701eadba55ea) at (unknown file) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 predictedarray at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/likelihoods.jl:773 unknown function (ip: 0x701e769938c4) at (unknown file) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 predictedarray at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/likelihoods.jl:635 predictedfn at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/likelihoods.jl:548 loglikelihood at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/likelihoods.jl:449 mhstep at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/metropolis_hastings.jl:519 unknown function (ip: 0x701e7699a936) at (unknown file) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 sample at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/metropolis_hastings.jl:426 sample at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/metropolis_hastings.jl:417 unknown function (ip: 0x701e769990d6) at (unknown file) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 metropolis_hastings at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/metropolis_hastings.jl:312 run_mh at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/metropolis_hastings.jl:128 [inlined] run_mh at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/metropolis_hastings.jl:151 #test_fit_rnadwelltime#169 at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/test.jl:243 test_fit_rnadwelltime at /home/pkgeval/.julia/packages/StochasticGene/0RXYN/src/test.jl:237 unknown function (ip: 0x701e7696b06f) at (unknown file) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 _include at ./loading.jl:2908 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_51466.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 exec_options at ./client.jl:286 _start at ./client.jl:553 jfptr__start_59882.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x701eaef18249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) Allocations: 3006816502 (Pool: 3006815611; Big: 891); GC: 4207 PkgEval terminated after 2724.99s: test duration exceeded the time limit