Package evaluation of Catlab on Julia 1.13.0-DEV.873 (be59b3b2f4*) started at 2025-07-17T22:23:36.071 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.46s ################################################################################ # Installation # Installing Catlab... Resolving package versions... ┌ Warning: tarball content does not match git-tree-sha1 └ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:845 Cloning [227ef7b5-1206-438b-ac65-934d6da304b8] ACSets from https://github.com/AlgebraicJulia/ACSets.jl.git Installed ACSets ─ v0.2.24 Updating `~/.julia/environments/v1.13/Project.toml` [134e5e36] + Catlab v0.16.20 Updating `~/.julia/environments/v1.13/Manifest.toml` [227ef7b5] + ACSets v0.2.24 [23cfdc9f] + AlgebraicInterfaces v0.1.4 [134e5e36] + Catlab v0.16.20 [3da002f7] + ColorTypes v0.12.1 [5ae59095] + Colors v0.13.1 [861a8166] + Combinatorics v1.0.3 [0fb5dd42] + CompTime v0.1.2 [34da2185] + Compat v4.17.0 [a81c6b42] + Compose v0.9.6 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [53c48c17] + FixedPointNumbers v0.8.5 ⌅ [f0ffcf3b] + GATlab v0.1.6 [6b9d7cbe] + GeneralizedGenerated v0.3.3 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] + JSON v0.21.4 [0f8b85d8] + JSON3 v1.14.3 [b14d175d] + JuliaVariables v0.2.4 [b964fa9f] + LaTeXStrings v1.4.0 [9c8b4983] + LightXML v0.9.2 [d8e11817] + MLStyle v0.4.17 [1914dd2f] + MacroTools v0.5.16 [442fdcdd] + Measures v0.3.2 [71a1bf82] + NameResolution v0.1.5 [bac558e1] + OrderedCollections v1.8.1 [12d937ae] + PEG v1.0.4 [69de0a69] + Parsers v2.8.3 [2ae35dd2] + Permutations v0.4.23 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [8162dcfd] + PrettyPrint v0.2.0 [08abe8d2] + PrettyTables v2.4.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [90137ffa] + StaticArrays v1.9.14 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [892a3eda] + StringManipulation v0.4.1 [6ec83bb0] + StructEquality v2.1.0 [856f2bd8] + StructTypes v1.11.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [94ce4f54] + Libiconv_jll v1.18.0+0 [02c8fc9c] + XML2_jll v2.14.4+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.14.1+1 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.7.15 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [efcefdf7] + PCRE2_jll v10.45.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 4.81s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... ERROR: LoadError: The following 2 direct dependencies failed to precompile: CatlabMetaGraphsExt Failed to precompile CatlabMetaGraphsExt [290f8f77-2072-5e21-992d-8502a00cff2b] to "/home/pkgeval/.julia/compiled/v1.13/CatlabMetaGraphsExt/jl_kOg3vB" (ProcessExited(1)). Error encountered while load FileIO.File{FileIO.DataFormat{:JLD2}, String}("/tmp/jl_eWoZPk"). Fatal error: ERROR: LoadError: ConcurrencyViolationError("deadlock detected in loading JLD2 using JLD2") Stacktrace: [1] canstart_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool) @ Base ./loading.jl:2184 [2] start_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool) @ Base ./loading.jl:2192 [3] _require_prelocked(uuidkey::Base.PkgId, env::Nothing) @ Base ./loading.jl:2463 [4] _require_prelocked @ ./loading.jl:2462 [inlined] [5] macro expansion @ ./lock.jl:376 [inlined] [6] __require(uuidkey::Base.PkgId) @ Base ./loading.jl:2460 [7] require @ ./loading.jl:2458 [inlined] [8] #37 @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:203 [inlined] [9] lock(f::FileIO.var"#37#38"{Base.PkgId}, l::ReentrantLock) @ Base ./lock.jl:335 [10] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:203 [11] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:196 [inlined] [12] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:185 [inlined] [13] load(::String; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:113 [14] load @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:109 [inlined] [15] #111 @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:26 [inlined] [16] mktemp(fn::JLD2.var"#111#112"{Symbol, Vector{Float64}, NTuple{5, Int64}, String, Dict{String, Int64}, Matrix{ComplexF64}, Vector{Float64}, Float64, Int64}, parent::String) @ Base.Filesystem ./file.jl:870 [17] mktemp(fn::Function) @ Base.Filesystem ./file.jl:868 [18] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:15 [inlined] [19] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [20] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:14 [inlined] [21] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] [22] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:118 Stacktrace: [1] handle_error(e::ConcurrencyViolationError, q::Base.PkgId, bt::Vector{Union{Ptr{Nothing}, Base.InterpreterIP}}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/error_handling.jl:71 [2] handle_exceptions(exceptions::Vector{Tuple{Any, Union{Base.PkgId, Module}, Vector}}, action::String) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/error_handling.jl:66 [3] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:228 [4] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:196 [inlined] [5] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:185 [inlined] [6] load(::String; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:113 [7] load @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:109 [inlined] [8] #111 @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:26 [inlined] [9] mktemp(fn::JLD2.var"#111#112"{Symbol, Vector{Float64}, NTuple{5, Int64}, String, Dict{String, Int64}, Matrix{ComplexF64}, Vector{Float64}, Float64, Int64}, parent::String) @ Base.Filesystem ./file.jl:870 [10] mktemp(fn::Function) @ Base.Filesystem ./file.jl:868 [11] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:15 [inlined] [12] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [13] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:14 [inlined] [14] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] [15] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:118 [16] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [17] IncludeInto @ ./Base.jl:311 [inlined] [18] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/JLD2.jl:518 [19] include(mod::Module, _path::String) @ Base ./Base.jl:309 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3002 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [24] include_string @ ./loading.jl:2858 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [26] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/JLD2/wLPAN/src/precompile.jl:3 in expression starting at /home/pkgeval/.julia/packages/JLD2/wLPAN/src/JLD2.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile JLD2 [033835bb-8acc-5ee8-8aae-3f567f8a3819] to "/home/pkgeval/.julia/compiled/v1.13/JLD2/jl_wqStc4" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3289 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2654 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#236 @ ./reflection.jl:1333 [inlined] [8] invokelatest_gr @ ./reflection.jl:1325 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3860 [10] maybe_cachefile_lock @ ./loading.jl:3857 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2640 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2468 [13] macro expansion @ ./loading.jl:2396 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2360 [16] require @ ./loading.jl:2336 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [20] top-level scope @ ~/.julia/packages/MetaGraphs/qq8oz/src/MetaGraphs.jl:3 [21] include(mod::Module, _path::String) @ Base ./Base.jl:309 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3002 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [26] include_string @ ./loading.jl:2858 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [28] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/MetaGraphs/qq8oz/src/MetaGraphs.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile MetaGraphs [626554b9-1ddb-594c-aa3c-2596fe9399a5] to "/home/pkgeval/.julia/compiled/v1.13/MetaGraphs/jl_jyRYi7" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3289 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2654 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#236 @ ./reflection.jl:1333 [inlined] [8] invokelatest_gr @ ./reflection.jl:1325 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3860 [10] maybe_cachefile_lock @ ./loading.jl:3857 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2640 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2468 [13] macro expansion @ ./loading.jl:2396 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2360 [16] require @ ./loading.jl:2336 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] _eval_import(imported::Bool, to::Module, from::Nothing, paths::Expr) @ Base ./module.jl:111 [19] top-level scope @ ~/.julia/packages/Catlab/1srGD/ext/CatlabMetaGraphsExt.jl:5 [20] include(mod::Module, _path::String) @ Base ./Base.jl:309 [21] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3002 [22] top-level scope @ stdin:5 [23] eval(m::Module, e::Any) @ Core ./boot.jl:489 [24] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [25] include_string @ ./loading.jl:2858 [inlined] [26] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [27] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/Catlab/1srGD/ext/CatlabMetaGraphsExt.jl:1 in expression starting at stdin:5 MetaGraphs Failed to precompile MetaGraphs [626554b9-1ddb-594c-aa3c-2596fe9399a5] to "/home/pkgeval/.julia/compiled/v1.13/MetaGraphs/jl_zHgQ1q" (ProcessExited(1)). Error encountered while load FileIO.File{FileIO.DataFormat{:JLD2}, String}("/tmp/jl_liNbmo"). Fatal error: ERROR: LoadError: ConcurrencyViolationError("deadlock detected in loading JLD2 using JLD2") Stacktrace: [1] canstart_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool) @ Base ./loading.jl:2184 [2] start_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool) @ Base ./loading.jl:2192 [3] _require_prelocked(uuidkey::Base.PkgId, env::Nothing) @ Base ./loading.jl:2463 [4] _require_prelocked @ ./loading.jl:2462 [inlined] [5] macro expansion @ ./lock.jl:376 [inlined] [6] __require(uuidkey::Base.PkgId) @ Base ./loading.jl:2460 [7] require @ ./loading.jl:2458 [inlined] [8] #37 @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:203 [inlined] [9] lock(f::FileIO.var"#37#38"{Base.PkgId}, l::ReentrantLock) @ Base ./lock.jl:335 [10] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:203 [11] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:196 [inlined] [12] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:185 [inlined] [13] load(::String; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:113 [14] load @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:109 [inlined] [15] #111 @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:26 [inlined] [16] mktemp(fn::JLD2.var"#111#112"{Symbol, Vector{Float64}, NTuple{5, Int64}, String, Dict{String, Int64}, Matrix{ComplexF64}, Vector{Float64}, Float64, Int64}, parent::String) @ Base.Filesystem ./file.jl:870 [17] mktemp(fn::Function) @ Base.Filesystem ./file.jl:868 [18] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:15 [inlined] [19] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [20] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:14 [inlined] [21] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] [22] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:118 Stacktrace: [1] handle_error(e::ConcurrencyViolationError, q::Base.PkgId, bt::Vector{Union{Ptr{Nothing}, Base.InterpreterIP}}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/error_handling.jl:71 [2] handle_exceptions(exceptions::Vector{Tuple{Any, Union{Base.PkgId, Module}, Vector}}, action::String) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/error_handling.jl:66 [3] action(::Symbol, ::Vector{Union{Base.PkgId, Module}}, ::FileIO.Formatted; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:228 [4] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:196 [inlined] [5] action @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:185 [inlined] [6] load(::String; options::@Kwargs{}) @ FileIO ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:113 [7] load @ ~/.julia/packages/FileIO/ePyCW/src/loadsave.jl:109 [inlined] [8] #111 @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:26 [inlined] [9] mktemp(fn::JLD2.var"#111#112"{Symbol, Vector{Float64}, NTuple{5, Int64}, String, Dict{String, Int64}, Matrix{ComplexF64}, Vector{Float64}, Float64, Int64}, parent::String) @ Base.Filesystem ./file.jl:870 [10] mktemp(fn::Function) @ Base.Filesystem ./file.jl:868 [11] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:15 [inlined] [12] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [13] macro expansion @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:14 [inlined] [14] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] [15] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/precompile.jl:118 [16] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [17] IncludeInto @ ./Base.jl:311 [inlined] [18] top-level scope @ ~/.julia/packages/JLD2/wLPAN/src/JLD2.jl:518 [19] include(mod::Module, _path::String) @ Base ./Base.jl:309 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3002 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [24] include_string @ ./loading.jl:2858 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [26] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/JLD2/wLPAN/src/precompile.jl:3 in expression starting at /home/pkgeval/.julia/packages/JLD2/wLPAN/src/JLD2.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile JLD2 [033835bb-8acc-5ee8-8aae-3f567f8a3819] to "/home/pkgeval/.julia/compiled/v1.13/JLD2/jl_4ZgxQ6" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3289 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2654 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#236 @ ./reflection.jl:1333 [inlined] [8] invokelatest_gr @ ./reflection.jl:1325 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3860 [10] maybe_cachefile_lock @ ./loading.jl:3857 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2640 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2468 [13] macro expansion @ ./loading.jl:2396 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2360 [16] require @ ./loading.jl:2336 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [20] top-level scope @ ~/.julia/packages/MetaGraphs/qq8oz/src/MetaGraphs.jl:3 [21] include(mod::Module, _path::String) @ Base ./Base.jl:309 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3002 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [26] include_string @ ./loading.jl:2858 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [28] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/MetaGraphs/qq8oz/src/MetaGraphs.jl:1 in expression starting at stdin:5 in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 156.49s ################################################################################ # Testing # Testing Catlab Status `/tmp/jl_bDzAKg/Project.toml` [227ef7b5] ACSets v0.2.24 [23cfdc9f] AlgebraicInterfaces v0.1.4 [134e5e36] Catlab v0.16.20 [a81c6b42] Compose v0.9.6 [a93c6f00] DataFrames v1.7.0 [864edb3b] DataStructures v0.18.22 ⌅ [f0ffcf3b] GATlab v0.1.6 [86223c79] Graphs v1.13.0 [42fd0dbc] IterativeSolvers v0.9.4 [0f8b85d8] JSON3 v1.14.3 [9c8b4983] LightXML v0.9.2 ⌃ [626554b9] MetaGraphs v0.7.2 [12d937ae] PEG v1.0.4 [90137ffa] StaticArrays v1.9.14 [bd369af6] Tables v1.12.1 [37e2e46d] LinearAlgebra v1.12.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.12.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_bDzAKg/Manifest.toml` [227ef7b5] ACSets v0.2.24 [23cfdc9f] AlgebraicInterfaces v0.1.4 [ec485272] ArnoldiMethod v0.4.0 [134e5e36] Catlab v0.16.20 [3da002f7] ColorTypes v0.12.1 [5ae59095] Colors v0.13.1 [861a8166] Combinatorics v1.0.3 [0fb5dd42] CompTime v0.1.2 [34da2185] Compat v4.17.0 [a81c6b42] Compose v0.9.6 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.7.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [5789e2e9] FileIO v1.17.0 [53c48c17] FixedPointNumbers v0.8.5 ⌅ [f0ffcf3b] GATlab v0.1.6 [6b9d7cbe] GeneralizedGenerated v0.3.3 [86223c79] Graphs v1.13.0 [d25df0c9] Inflate v0.1.5 [842dd82b] InlineStrings v1.4.4 [41ab1584] InvertedIndices v1.3.1 [c8e1da08] IterTools v1.10.0 [42fd0dbc] IterativeSolvers v0.9.4 [82899510] IteratorInterfaceExtensions v1.0.0 ⌅ [033835bb] JLD2 v0.4.54 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [0f8b85d8] JSON3 v1.14.3 [b14d175d] JuliaVariables v0.2.4 [b964fa9f] LaTeXStrings v1.4.0 [9c8b4983] LightXML v0.9.2 [d8e11817] MLStyle v0.4.17 [1914dd2f] MacroTools v0.5.16 [442fdcdd] Measures v0.3.2 ⌃ [626554b9] MetaGraphs v0.7.2 [e1d29d7a] Missings v1.2.0 [71a1bf82] NameResolution v0.1.5 [bac558e1] OrderedCollections v1.8.1 [12d937ae] PEG v1.0.4 [69de0a69] Parsers v2.8.3 [2ae35dd2] Permutations v0.4.23 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [8162dcfd] PrettyPrint v0.2.0 [08abe8d2] PrettyTables v2.4.0 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [91c51154] SentinelArrays v1.4.8 [699a6c99] SimpleTraits v0.9.4 [a2af1166] SortingAlgorithms v1.2.1 [90137ffa] StaticArrays v1.9.14 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [892a3eda] StringManipulation v0.4.1 [6ec83bb0] StructEquality v2.1.0 [856f2bd8] StructTypes v1.11.0 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [3bb67fe8] TranscodingStreams v0.11.3 [94ce4f54] Libiconv_jll v1.18.0+0 [02c8fc9c] XML2_jll v2.14.4+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.14.1+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.7.15 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.1+0 [efcefdf7] PCRE2_jll v10.45.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Test Summary: | Pass Total Time Theories | 275 275 1m26.3s Categories: Error During Test at /home/pkgeval/.julia/packages/Catlab/1srGD/test/categorical_algebra/FinCats.jl:40 Test threw exception Expression: edges(g) == [1, 3] MethodError: no method matching edges(::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{1, Int64}}}) The function `edges` exists, but no method is defined for this combination of argument types. Closest candidates are: edges(!Matched::Catlab.Graphs.BasicGraphs.HasGraph) @ Catlab ~/.julia/packages/Catlab/1srGD/src/graphs/BasicGraphs.jl:106 edges(!Matched::Catlab.Graphs.BasicGraphs.HasGraph, !Matched::Int64, !Matched::Int64) @ Catlab ~/.julia/packages/Catlab/1srGD/src/graphs/BasicGraphs.jl:107 edges(!Matched::Catlab.Graphs.BipartiteGraphs.AbstractUndirectedBipartiteGraph) @ Catlab ~/.julia/packages/Catlab/1srGD/src/graphs/BipartiteGraphs.jl:135 ... Stacktrace: [1] top-level scope @ ~/.julia/packages/Catlab/1srGD/test/categorical_algebra/FinCats.jl:529 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:738 [inlined] Categories: Error During Test at /home/pkgeval/.julia/packages/Catlab/1srGD/test/categorical_algebra/FinCats.jl:76 Test threw exception Expression: hom_map(G, Path(h, [1, 2])) == Path(k, [1, 2, 3, 4]) MethodError: no method matching has_part(::Catlab.Graphs.BasicGraphs.Graph, ::Symbol, ::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{0, Int64}}) The function `has_part` exists, but no method is defined for this combination of argument types. Closest candidates are: has_part(::Any, ::Symbol, !Matched::Int64) @ ACSets ~/.julia/packages/ACSets/arYE8/src/ACSetInterface.jl:102 has_part(::Any, ::Symbol, !Matched::AbstractVector{Int64}) @ ACSets ~/.julia/packages/ACSets/arYE8/src/ACSetInterface.jl:103 has_part(::ACSets.DenseACSets.StructACSet{S}, ::Symbol) where S @ ACSets ~/.julia/packages/ACSets/arYE8/src/DenseACSets.jl:467 ... Stacktrace: [1] has_edge(g::Catlab.Graphs.BasicGraphs.Graph, e::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{0, Int64}}) @ Catlab.Graphs.BasicGraphs ~/.julia/packages/Catlab/1srGD/src/graphs/BasicGraphs.jl:124 [2] (::Catlab.CategoricalAlgebra.FinCats.var"#Path##0#Path##1"{Catlab.Graphs.BasicGraphs.Graph})(e::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{0, Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:187 [3] _all @ ./anyall.jl:211 [inlined] [4] all @ ./reducedim.jl:996 [inlined] [5] Catlab.CategoricalAlgebra.FinCats.Path(g::Catlab.Graphs.BasicGraphs.Graph, es::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:187 [6] coerce_path(g::Catlab.Graphs.BasicGraphs.Graph, x::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:233 [7] (::Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}})(f::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ./none:-1 [8] MappingRF @ ./reduce.jl:98 [inlined] [9] afoldl(::Base.MappingRF{Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}, Base.BottomRF{typeof(vcat)}}, ::Base._InitialValue, ::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, ::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}) @ Base ./operators.jl:600 [10] _foldl_impl(op::Base.MappingRF{Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}, Base.BottomRF{typeof(vcat)}}, init::Base._InitialValue, itr::Tuple{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}) @ Base ./reduce.jl:66 [11] foldl_impl(op::Base.MappingRF{Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}, Base.BottomRF{typeof(vcat)}}, nt::Base._InitialValue, itr::Tuple{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}) @ Base ./reduce.jl:46 [12] mapfoldl_impl(f::typeof(identity), op::typeof(vcat), nt::Base._InitialValue, itr::Base.Generator{Tuple{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}, Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}}) @ Base ./reduce.jl:42 [13] mapfoldl(f::Function, op::Function, itr::Base.Generator{Tuple{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}, Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}}; init::Base._InitialValue) @ Base ./reduce.jl:173 [14] mapreduce(f::Function, op::Function, itr::Base.Generator{Tuple{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}, Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}}; kw::@Kwargs{}) @ Base ./reduce.jl:305 [15] reduce(op::Function, itr::Base.Generator{Tuple{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}, Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}}; kw::@Kwargs{}) @ Base ./reduce.jl:489 [16] compose(::Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, ::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, ::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:227 [17] (::Catlab.CategoricalAlgebra.FinCats.var"#hom_map##2#hom_map##3"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}})(::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, ::Vararg{Any}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:394 [18] BottomRF @ ./reduce.jl:84 [inlined] [19] MappingRF @ ./reduce.jl:98 [inlined] [20] _foldl_impl @ ./reduce.jl:60 [inlined] [21] foldl_impl @ ./reduce.jl:46 [inlined] [22] mapfoldl_impl @ ./reduce.jl:42 [inlined] [23] _mapreduce_dim @ ./reducedim.jl:335 [inlined] [24] mapreduce @ ./reducedim.jl:330 [inlined] [25] hom_map(F::Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}}, path::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:394 [26] top-level scope @ ~/.julia/packages/Catlab/1srGD/test/categorical_algebra/FinCats.jl:529 [27] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:738 [inlined] Categories: Error During Test at /home/pkgeval/.julia/packages/Catlab/1srGD/test/categorical_algebra/FinCats.jl:77 Test threw exception Expression: F ⋅ G == FinFunctor([1, 5], [[1, 2, 3, 4]], C, E) MethodError: no method matching has_part(::Catlab.Graphs.BasicGraphs.Graph, ::Symbol, ::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{0, Int64}}) The function `has_part` exists, but no method is defined for this combination of argument types. Closest candidates are: has_part(::Any, ::Symbol, !Matched::Int64) @ ACSets ~/.julia/packages/ACSets/arYE8/src/ACSetInterface.jl:102 has_part(::Any, ::Symbol, !Matched::AbstractVector{Int64}) @ ACSets ~/.julia/packages/ACSets/arYE8/src/ACSetInterface.jl:103 has_part(::ACSets.DenseACSets.StructACSet{S}, ::Symbol) where S @ ACSets ~/.julia/packages/ACSets/arYE8/src/DenseACSets.jl:467 ... Stacktrace: [1] has_edge(g::Catlab.Graphs.BasicGraphs.Graph, e::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{0, Int64}}) @ Catlab.Graphs.BasicGraphs ~/.julia/packages/Catlab/1srGD/src/graphs/BasicGraphs.jl:124 [2] (::Catlab.CategoricalAlgebra.FinCats.var"#Path##0#Path##1"{Catlab.Graphs.BasicGraphs.Graph})(e::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{0, Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:187 [3] _all @ ./anyall.jl:211 [inlined] [4] all @ ./reducedim.jl:996 [inlined] [5] Catlab.CategoricalAlgebra.FinCats.Path(g::Catlab.Graphs.BasicGraphs.Graph, es::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:187 [6] coerce_path(g::Catlab.Graphs.BasicGraphs.Graph, x::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:233 [7] (::Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}})(f::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ./none:-1 [8] MappingRF @ ./reduce.jl:98 [inlined] [9] afoldl(::Base.MappingRF{Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}, Base.BottomRF{typeof(vcat)}}, ::Base._InitialValue, ::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, ::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}) @ Base ./operators.jl:600 [10] _foldl_impl(op::Base.MappingRF{Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}, Base.BottomRF{typeof(vcat)}}, init::Base._InitialValue, itr::Tuple{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}) @ Base ./reduce.jl:66 [11] foldl_impl(op::Base.MappingRF{Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}, Base.BottomRF{typeof(vcat)}}, nt::Base._InitialValue, itr::Tuple{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}) @ Base ./reduce.jl:46 [12] mapfoldl_impl(f::typeof(identity), op::typeof(vcat), nt::Base._InitialValue, itr::Base.Generator{Tuple{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}, Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}}) @ Base ./reduce.jl:42 [13] mapfoldl(f::Function, op::Function, itr::Base.Generator{Tuple{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}, Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}}; init::Base._InitialValue) @ Base ./reduce.jl:173 [14] mapreduce(f::Function, op::Function, itr::Base.Generator{Tuple{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}, Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}}; kw::@Kwargs{}) @ Base ./reduce.jl:305 [15] reduce(op::Function, itr::Base.Generator{Tuple{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}, Catlab.CategoricalAlgebra.FinCats.var"#compose##0#compose##1"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}}}; kw::@Kwargs{}) @ Base ./reduce.jl:489 [16] compose(::Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, ::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, ::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:227 [17] (::Catlab.CategoricalAlgebra.FinCats.var"#hom_map##2#hom_map##3"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}})(::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}, ::Vararg{Any}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:394 [18] BottomRF @ ./reduce.jl:84 [inlined] [19] MappingRF @ ./reduce.jl:98 [inlined] [20] _foldl_impl @ ./reduce.jl:60 [inlined] [21] foldl_impl @ ./reduce.jl:46 [inlined] [22] mapfoldl_impl @ ./reduce.jl:42 [inlined] [23] _mapreduce_dim @ ./reducedim.jl:335 [inlined] [24] mapreduce @ ./reducedim.jl:330 [inlined] [25] hom_map(F::Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}}, path::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:394 [26] #44 @ ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:556 [inlined] [27] iterate @ ./generator.jl:48 [inlined] [28] _collect(c::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}, itr::Base.Generator{Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}, Catlab.CategoricalAlgebra.FinCats.var"#44#45"{Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}}}}, ::Base.EltypeUnknown, isz::Base.HasShape{1}) @ Base ./array.jl:816 [29] collect_similar @ ./array.jl:738 [inlined] [30] map @ ./abstractarray.jl:3386 [inlined] [31] #mapvals#80 @ ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:790 [inlined] [32] mapvals @ ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:785 [inlined] [33] do_compose(F::Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}}, G::Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:555 [34] compose_id @ ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/Categories.jl:310 [inlined] [35] macro expansion @ ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/Categories.jl:286 [inlined] [36] #compose#5 @ ./none:0 [inlined] [37] compose @ ./none:-1 [inlined] [38] ⋅(698::Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}}, 699::Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Vector{Int64}}}}) @ Catlab.CategoricalAlgebra.Categories ./none:-1 [39] top-level scope @ ~/.julia/packages/Catlab/1srGD/test/categorical_algebra/FinCats.jl:529 [40] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:738 [inlined] WARNING: Detected access to binding `TestACSetsGATsInterop.Dendrogram` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestCSets.DDS` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestCSets.SetAttr` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestCSets.VELabeledGraph` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestCSets.A2` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestCSets.AbsMADGraph` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestCSets.Petri` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestHomSearch.SetAttr` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestHomSearch.##LSet#281` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestHomSearch.DDS` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestHomSearch.VELabeledGraph` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. CSets: Test Failed at /home/pkgeval/.julia/packages/Catlab/1srGD/test/categorical_algebra/HomSearch.jl:368 Expression: first(first(maximum_common_subobject(g1, g2; abstract = false))) == exp Evaluated: Catlab.Graphs.BasicGraphs.WeightedGraph{Bool}: V = 1:3 E = 1:1 Weight = 1:0 src : E → V = [2] tgt : E → V = [3] weight : E → Weight = Bool[0] == Catlab.Graphs.BasicGraphs.WeightedGraph{Bool}: V = 1:3 E = 1:1 Weight = 1:0 src : E → V = [1] tgt : E → V = [2] weight : E → Weight = Bool[0] Stacktrace: [1] top-level scope @ ~/.julia/packages/Catlab/1srGD/test/categorical_algebra/HomSearch.jl:529 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:741 [inlined] [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [4] top-level scope @ ~/.julia/packages/Catlab/1srGD/test/categorical_algebra/CategoricalAlgebra.jl:36 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1858 [inlined] [6] macro expansion @ ~/.julia/packages/Catlab/1srGD/test/categorical_algebra/CategoricalAlgebra.jl:38 [inlined] WARNING: Detected access to binding `TestHomSearch.AbsMADGraph` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestCatElements.Petri` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. Diagrams: Error During Test at /home/pkgeval/.julia/packages/Catlab/1srGD/test/categorical_algebra/CategoricalAlgebra.jl:42 Got exception outside of a @test LoadError: MethodError: no method matching has_part(::Catlab.Graphs.BasicGraphs.Graph, ::Symbol, ::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{0, Int64}}) The function `has_part` exists, but no method is defined for this combination of argument types. Closest candidates are: has_part(::Any, ::Symbol, !Matched::Int64) @ ACSets ~/.julia/packages/ACSets/arYE8/src/ACSetInterface.jl:102 has_part(::Any, ::Symbol, !Matched::AbstractVector{Int64}) @ ACSets ~/.julia/packages/ACSets/arYE8/src/ACSetInterface.jl:103 has_part(::ACSets.DenseACSets.StructACSet{S}, ::Symbol) where S @ ACSets ~/.julia/packages/ACSets/arYE8/src/DenseACSets.jl:467 ... Stacktrace: [1] has_edge(g::Catlab.Graphs.BasicGraphs.Graph, e::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{0, Int64}}) @ Catlab.Graphs.BasicGraphs ~/.julia/packages/Catlab/1srGD/src/graphs/BasicGraphs.jl:124 [2] (::Catlab.CategoricalAlgebra.FinCats.var"#Path##0#Path##1"{Catlab.Graphs.BasicGraphs.Graph})(e::Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{0, Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:187 [3] _all @ ./anyall.jl:211 [inlined] [4] all @ ./reducedim.jl:996 [inlined] [5] Catlab.CategoricalAlgebra.FinCats.Path(g::Catlab.Graphs.BasicGraphs.Graph, es::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:187 [6] coerce_path(g::Catlab.Graphs.BasicGraphs.Graph, x::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:233 [7] hom(C::Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, f::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:230 [8] (::Catlab.CategoricalAlgebra.FinCats.var"#FinDomFunctor##10#FinDomFunctor##11"{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}})(g::Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, Edges} where Edges<:AbstractVector{Int64}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:512 [9] iterate @ ./generator.jl:48 [inlined] [10] _collect @ ./array.jl:816 [inlined] [11] collect_similar @ ./array.jl:738 [inlined] [12] map @ ./abstractarray.jl:3386 [inlined] [13] mappairs @ ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:772 [inlined] [14] Functor @ ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:512 [inlined] [15] do_compose(F::Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{1, Int64}}}}, G::Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{1, Int64}}}}) @ Catlab.CategoricalAlgebra.FinCats ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/FinCats.jl:555 [16] compose_id @ ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/Categories.jl:310 [inlined] [17] macro expansion @ ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/Categories.jl:286 [inlined] [18] #compose#5 @ ./none:0 [inlined] [19] compose @ ./none:-1 [inlined] [20] ⋅ @ ./none:-1 [inlined] [21] compose(f::Catlab.CategoricalAlgebra.Diagrams.SimpleDiagramHom{AlgebraicInterfaces.id, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{1, Int64}}}}, Catlab.CategoricalAlgebra.FinCats.FinTransformationMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Vector{Catlab.Theories.FreeSchema.Ob{:generator}}, Vector{Catlab.Theories.FreeSchema.Hom{:generator}}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Vector{Catlab.Theories.FreeSchema.Ob{:generator}}, Vector{Catlab.Theories.FreeSchema.Hom{:generator}}}, Vector{Catlab.Theories.FreeSchema.Hom}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Vector{Catlab.Theories.FreeSchema.Ob{:generator}}, Vector{Catlab.Theories.FreeSchema.Hom{:generator}}}}, g::Catlab.CategoricalAlgebra.Diagrams.SimpleDiagramHom{AlgebraicInterfaces.id, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{1, Int64}}}}, Catlab.CategoricalAlgebra.FinCats.FinTransformationMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Vector{Catlab.Theories.FreeSchema.Ob{:generator}}, Vector{Catlab.Theories.FreeSchema.Hom{:generator}}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Vector{Catlab.Theories.FreeSchema.Ob{:generator}}, Vector{Catlab.Theories.FreeSchema.Hom{:generator}}}, Vector{Catlab.Theories.FreeSchema.Hom}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Vector{Catlab.Theories.FreeSchema.Ob{:generator}}, Vector{Catlab.Theories.FreeSchema.Hom{:generator}}}}) @ Catlab.CategoricalAlgebra.Diagrams ~/.julia/packages/Catlab/1srGD/src/categorical_algebra/Diagrams.jl:194 [22] ⋅(805::Catlab.CategoricalAlgebra.Diagrams.SimpleDiagramHom{AlgebraicInterfaces.id, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{1, Int64}}}}, Catlab.CategoricalAlgebra.FinCats.FinTransformationMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Vector{Catlab.Theories.FreeSchema.Ob{:generator}}, Vector{Catlab.Theories.FreeSchema.Hom{:generator}}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Vector{Catlab.Theories.FreeSchema.Ob{:generator}}, Vector{Catlab.Theories.FreeSchema.Hom{:generator}}}, Vector{Catlab.Theories.FreeSchema.Hom}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Vector{Catlab.Theories.FreeSchema.Ob{:generator}}, Vector{Catlab.Theories.FreeSchema.Hom{:generator}}}}, 806::Catlab.CategoricalAlgebra.Diagrams.SimpleDiagramHom{AlgebraicInterfaces.id, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Vector{Int64}, Vector{Catlab.CategoricalAlgebra.FinCats.Path{Int64, Int64, StaticArraysCore.SVector{1, Int64}}}}, Catlab.CategoricalAlgebra.FinCats.FinTransformationMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Vector{Catlab.Theories.FreeSchema.Ob{:generator}}, Vector{Catlab.Theories.FreeSchema.Hom{:generator}}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Vector{Catlab.Theories.FreeSchema.Ob{:generator}}, Vector{Catlab.Theories.FreeSchema.Hom{:generator}}}, Vector{Catlab.Theories.FreeSchema.Hom}}, Catlab.CategoricalAlgebra.FinCats.FinDomFunctorMap{Catlab.CategoricalAlgebra.FinCats.FreeCatGraph{Catlab.Graphs.BasicGraphs.Graph}, Catlab.CategoricalAlgebra.FinCats.FinCatPresentation{Catlab.Theories.ThSchema.Meta.T, Union{Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Ob}, Union{Catlab.Theories.FreeSchema.Attr, Catlab.Theories.FreeSchema.AttrType, Catlab.Theories.FreeSchema.Hom}}, Vector{Catlab.Theories.FreeSchema.Ob{:generator}}, Vector{Catlab.Theories.FreeSchema.Hom{:generator}}}}) @ Catlab.CategoricalAlgebra.Diagrams ./none:-1 [23] top-level scope @ ~/.julia/packages/Catlab/1srGD/test/categorical_algebra/Diagrams.jl:49 [24] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [25] top-level scope @ ~/.julia/packages/Catlab/1srGD/test/categorical_algebra/CategoricalAlgebra.jl:43 [26] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1858 [inlined] [27] macro expansion @ ~/.julia/packages/Catlab/1srGD/test/categorical_algebra/CategoricalAlgebra.jl:43 [inlined] [28] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [29] top-level scope @ ~/.julia/packages/Catlab/1srGD/test/runtests.jl:8 [30] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1858 [inlined] [31] macro expansion @ ~/.julia/packages/Catlab/1srGD/test/runtests.jl:8 [inlined] [32] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [33] top-level scope @ none:6 [34] eval(m::Module, e::Any) @ Core ./boot.jl:489 [35] exec_options(opts::Base.JLOptions) @ Base ./client.jl:286 [36] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/Catlab/1srGD/test/categorical_algebra/Diagrams.jl:1 WARNING: Detected access to binding `TestChase.School` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestChase.Loop` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestFunctorialDataMigrations.AcsetSet` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestFunctorialDataMigrations.DDS` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestFunctorialDataMigrations.LabeledDDS` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestFunctorialDataMigrations.Thing1WithProp` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestFunctorialDataMigrations.Thing2WithProp` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestFunctorialDataMigrations.WG` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestFunctorialDataMigrations.DDS42` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestStructuredCospans.VELabeledGraph` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestStructuredCospans.WeightedLabeledGraph` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `TestStructuredCospans.Weighted2DGlobularSet` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 43 running 1 of 1 signal (10): User defined signal 1 _ZN4llvm16MetadataTracking5trackEPvRNS_8MetadataENS_12PointerUnionIJPNS_15MetadataAsValueEPS2_PNS_14DebugValueUserEEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm11Instruction12copyMetadataERKS0_NS_8ArrayRefIjEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZNK4llvm11Instruction5cloneEv at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm15CloneBasicBlockEPKNS_10BasicBlockERNS_8ValueMapIPKNS_5ValueENS_14WeakTrackingVHENS_14ValueMapConfigIS6_NS_3sys10SmartMutexILb0EEEEEEERKNS_5TwineEPNS_8FunctionEPNS_14ClonedCodeInfoE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm21CloneFunctionBodyIntoERNS_8FunctionERKS0_RNS_8ValueMapIPKNS_5ValueENS_14WeakTrackingVHENS_14ValueMapConfigIS7_NS_3sys10SmartMutexILb0EEEEEEENS_10RemapFlagsERNS_15SmallVectorImplIPNS_10ReturnInstEEEPKcPNS_14ClonedCodeInfoEPNS_20ValueMapTypeRemapperEPNS_17ValueMaterializerEPKNS_11SmallPtrSetIPKNS_8MetadataELj16EEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm17CloneFunctionIntoEPNS_8FunctionEPKS0_RNS_8ValueMapIPKNS_5ValueENS_14WeakTrackingVHENS_14ValueMapConfigIS7_NS_3sys10SmartMutexILb0EEEEEEENS_23CloneFunctionChangeTypeERNS_15SmallVectorImplIPNS_10ReturnInstEEEPKcPNS_14ClonedCodeInfoEPNS_20ValueMapTypeRemapperEPNS_17ValueMaterializerE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) removeAddrspaces at /source/src/llvm-remove-addrspaces.cpp:356 run at /source/src/llvm-remove-addrspaces.cpp:429 run at /source/src/llvm-remove-addrspaces.cpp:455 run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm11PassManagerINS_6ModuleENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/src/pipeline.cpp:791 operator() at /source/src/jitlayers.cpp:1511 withModuleDo<(anonymous namespace)::sizedOptimizerT::operator()(llvm::orc::ThreadSafeModule) [with long unsigned int N = 4]:: > at /source/usr/include/llvm/ExecutionEngine/Orc/ThreadSafeModule.h:136 [inlined] operator() at /source/src/jitlayers.cpp:1472 [inlined] operator() at /source/src/jitlayers.cpp:1624 [inlined] addModule at /source/src/jitlayers.cpp:2081 jl_compile_codeinst_now at /source/src/jitlayers.cpp:685 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:876 jl_compile_method_internal at /source/src/gf.c:3319 _jl_invoke at /source/src/gf.c:3799 [inlined] ijl_apply_generic at /source/src/gf.c:4004 _mapreduce_dim at ./reducedim.jl:338 #mapreduce#731 at ./reducedim.jl:330 [inlined] mapreduce at ./reducedim.jl:330 _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 #178 at /home/pkgeval/.julia/packages/ACSets/arYE8/src/DenseACSets.jl:1121 iterate at ./generator.jl:48 [inlined] collect_to! at ./array.jl:854 collect_to_with_first! at ./array.jl:832 unknown function (ip: 0x75b9913595b2) at (unknown file) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 collect at ./array.jl:806 unknown function (ip: 0x75b9913578f2) at (unknown file) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 map at ./abstractarray.jl:3416 #map#154 at /home/pkgeval/.julia/packages/ACSets/arYE8/src/DenseACSets.jl:1119 map at /home/pkgeval/.julia/packages/ACSets/arYE8/src/DenseACSets.jl:1097 [inlined] colimit at /home/pkgeval/.julia/packages/Catlab/1srGD/src/categorical_algebra/SliceCategories.jl:112 #colimit#3 at /home/pkgeval/.julia/packages/Catlab/1srGD/src/categorical_algebra/Limits.jl:144 [inlined] colimit at /home/pkgeval/.julia/packages/Catlab/1srGD/src/categorical_algebra/Limits.jl:144 unknown function (ip: 0x75b991342d12) at (unknown file) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_eval_module_expr at /source/src/toplevel.c:196 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:658 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 _include at ./loading.jl:2908 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_51466.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_eval_module_expr at /source/src/toplevel.c:196 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:658 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 _include at ./loading.jl:2908 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_51466.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 _include at ./loading.jl:2908 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_51466.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 exec_options at ./client.jl:286 _start at ./client.jl:553 jfptr__start_59882.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x75ba0ab7c249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== Test Summary: | Pass ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_68198.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3807 [inlined] ijl_apply_generic at /source/src/gf.c:4004 jl_apply at /source/src/julia.h:2345 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Fail ============================================================== Profile collected. A report will print at the next yield point ============================================================== Error ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x0000754399a895a0 Total snapshots: 439. Utilization: 0% ╎439 @Base/task.jl:1129 wait_forever() 438╎ 439 @Base/task.jl:1192 wait() ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Total Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000075b9f0a00010 Total snapshots: 23. Utilization: 100% ╎23 @Base/client.jl:553 _start() ╎ 23 @Base/client.jl:286 exec_options(opts::Base.JLOptions) ╎ 23 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ 23 @Base/Base.jl:311 (::Base.IncludeInto)(fname::String) ╎ 23 @Base/Base.jl:310 include(mapexpr::Function, mod::Module, _path::Str… ╎ 23 @Base/loading.jl:2908 _include(mapexpr::Function, mod::Module, _pat… ╎ ╎ 23 @Base/loading.jl:2848 include_string(mapexpr::typeof(identity), mo… ╎ ╎ 23 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ 23 @Base/Base.jl:311 (::Base.IncludeInto)(fname::String) ╎ ╎ 23 @Base/Base.jl:310 include(mapexpr::Function, mod::Module, _path… ╎ ╎ 23 @Base/loading.jl:2908 _include(mapexpr::Function, mod::Module,… ╎ ╎ ╎ 23 @Base/loading.jl:2848 include_string(mapexpr::typeof(identity… ╎ ╎ ╎ 23 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ ╎ 23 @Base/Base.jl:311 (::Base.IncludeInto)(fname::String) ╎ ╎ ╎ 23 @Base/Base.jl:310 include(mapexpr::Function, mod::Module, … ╎ ╎ ╎ 23 @Base/loading.jl:2908 _include(mapexpr::Function, mod::Mo… ╎ ╎ ╎ ╎ 23 @Base/loading.jl:2848 include_string(mapexpr::typeof(ide… ╎ ╎ ╎ ╎ 23 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ ╎ ╎ 23 @Catlab/…imits.jl:144 colimit(diagram::Catlab.Categori… ╎ ╎ ╎ ╎ 23 @Catlab/…mits.jl:144 #colimit#3 ╎ ╎ ╎ ╎ 23 @Catlab/…ries.jl:112 colimit(::Type{Tuple{Catlab.Cat… ╎ ╎ ╎ ╎ ╎ 23 @ACSets/…ets.jl:1097 map ╎ ╎ ╎ ╎ ╎ 23 @ACSets/…ets.jl:1134 map(acs::Catlab.CategoricalAl… ╎ ╎ ╎ ╎ ╎ 23 @Compiler/….jl:1570 typeinf_ext_toplevel(mi::Core… ╎ ╎ ╎ ╎ ╎ 23 @Compiler/….jl:1561 typeinf_ext_toplevel ╎ ╎ ╎ ╎ ╎ 23 @Compiler/….jl:1378 typeinf_ext(interp::Compile… ╎ ╎ ╎ ╎ ╎ ╎ 21 @Compiler/…jl:4469 typeinf(interp::Compiler.Na… ╎ ╎ ╎ ╎ ╎ ╎ 21 @Compiler/…jl:4311 typeinf_local(interp::Comp… ╎ ╎ ╎ ╎ ╎ ╎ 21 @Compiler/…l:3762 abstract_eval_basic_statem… ╎ ╎ ╎ ╎ ╎ ╎ 21 @Compiler/…l:3805 abstract_eval_basic_state… ╎ ╎ ╎ ╎ ╎ ╎ 21 @Compiler/…l:3430 abstract_eval_statement_… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 21 @Compiler/…l:3074 abstract_eval_call ╎ ╎ ╎ ╎ ╎ ╎ ╎ 21 @Compiler/…l:3056 abstract_call(interp::… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 21 @Compiler/…l:2896 abstract_call ╎ ╎ ╎ ╎ ╎ ╎ ╎ 21 @Compiler/…l:2903 abstract_call(interp… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 21 @Compiler/…l:2796 abstract_call_known… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 21 @Compiler/…l:338 abstract_call_gf_by… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 21 @Compiler/…l:167 (::Compiler.var"#i… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 21 @Compiler/…l:735 abstract_call_met… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 21 @Compiler/…l:1029 typeinf_edge(in… ╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ 21 @Base/…ls.jl:1736 specialize_met… 20╎ ╎ ╎ ╎ ╎ ╎ ╎ ╎ +1 21 @Base/…ls.jl:1749 #specialize_me… ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…jl:4476 typeinf(interp::Compiler.Na… ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…jl:236 finish_nocycle(::Compiler.N… ╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…jl:147 finish!(interp::Compiler.N… 2╎ ╎ ╎ ╎ ╎ ╎ 2 @Compiler/…l:447 maybe_compress_codeinfo Time CategoricalAlgebra | 1187 1 4 1192 40m30.9s Categories | 128 3 131 1m25.5s FreeDiagrams | 87 87 58.8s Limits | 18 18 51.2s Matrices | 19 19 9.3s Sets | 313 313 2m36.6s Relations | 23 23 7.3s Permutations | 35 35 4.3s CSets | 434 1 435 17m49.6s Arrow Elements | 13 13 6.4s DiBipartite Elements | 7 7 2.7s Elements of graph homomorphism | 2 2 0.1s inverse of elements of homomorphism | 25 25 16.3s Diagrams | 20 1 21 10.7s Chase | 12 12 2m04.0s FunctorialDataMigrations | 38 38 11m39.1s StructuredCospans | 55 55 1m58.3s SliceCategories | 5 5 36.1s RNG of the outermost testset: Random.Xoshiro(0xa93340d4cc1a7f0e, 0x9fbcf52d7a09d9d7, 0xf05bdafcd5157e89, 0x522dd85ccee40bd9, 0x797651d70bdfd82f) ERROR: LoadError: Some tests did not pass: 1187 passed, 1 failed, 4 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/Catlab/1srGD/test/runtests.jl:7 Testing failed after 2537.63s PkgEval terminated after 2722.84s: test duration exceeded the time limit