Package evaluation of RestrictedBoltzmannMachines on Julia 1.13.0-DEV.868 (f2a8e18a98*) started at 2025-07-15T15:16:52.321 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.84s ################################################################################ # Installation # Installing RestrictedBoltzmannMachines... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [12e6b396] + RestrictedBoltzmannMachines v5.1.1 Updating `~/.julia/environments/v1.13/Manifest.toml` [79e6a3ab] + Adapt v4.3.0 [4fba245c] + ArrayInterface v7.19.0 [d360d2e6] + ChainRulesCore v1.25.2 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.17.0 [187b0558] + ConstructionBase v1.6.0 [b552c78f] + DiffRules v1.15.1 [ffbed154] + DocStringExtensions v0.9.5 [da5c29d0] + EllipsisNotation v1.8.0 [1a297f60] + FillArrays v1.13.0 [d9f16b24] + Functors v0.5.2 [615f187c] + IfElse v0.1.1 [92d709cd] + IrrationalConstants v0.2.4 [692b3bcd] + JLLWrappers v1.7.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [77ba4419] + NaNMath v1.1.3 [3bd65402] + Optimisers v0.4.6 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [ae029012] + Requires v1.3.1 [12e6b396] + RestrictedBoltzmannMachines v5.1.1 [276daf66] + SpecialFunctions v2.5.1 [aedffcd0] + Static v1.2.0 [0d7ed370] + StaticArrayInterface v1.8.0 [10745b16] + Statistics v1.11.1 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [56f22d72] + Artifacts v1.11.0 [ade2ca70] + Dates v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [8e850b90] + libblastrampoline_jll v5.13.1+0 Installation completed after 4.33s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 58.84s ################################################################################ # Testing # Testing RestrictedBoltzmannMachines Status `/tmp/jl_NYRXqk/Project.toml` [4c88cf16] Aqua v0.8.13 [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.120 [da5c29d0] EllipsisNotation v1.8.0 [26cc04aa] FiniteDifferences v0.12.32 [f6369f11] ForwardDiff v1.0.1 [f67ccb44] HDF5 v0.17.2 [2ab3a3ac] LogExpFunctions v0.3.29 [872c559c] NNlib v0.9.30 [3bd65402] Optimisers v0.4.6 [1fd47b50] QuadGK v2.11.2 [12e6b396] RestrictedBoltzmannMachines v5.1.1 [276daf66] SpecialFunctions v2.5.1 [10745b16] Statistics v1.11.1 [2913bbd2] StatsBase v0.34.5 [98cad3c8] ValueHistories v0.5.4 [e88e6eb3] Zygote v0.7.10 [b77e0a4c] InteractiveUtils v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_NYRXqk/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [4c88cf16] Aqua v0.8.13 [4fba245c] ArrayInterface v7.19.0 [a9b6321e] Atomix v1.1.1 [082447d4] ChainRules v1.72.5 [d360d2e6] ChainRulesCore v1.25.2 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 ⌃ [34da2185] Compat v4.16.0 [187b0558] ConstructionBase v1.6.0 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.5 [da5c29d0] EllipsisNotation v1.8.0 [1a297f60] FillArrays v1.13.0 [26cc04aa] FiniteDifferences v0.12.32 [f6369f11] ForwardDiff v1.0.1 [d9f16b24] Functors v0.5.2 [46192b85] GPUArraysCore v0.2.0 [f67ccb44] HDF5 v0.17.2 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [7869d1d1] IRTools v0.4.15 [615f187c] IfElse v0.1.1 [92d709cd] IrrationalConstants v0.2.4 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.0 ⌃ [63c18a36] KernelAbstractions v0.9.35 [2ab3a3ac] LogExpFunctions v0.3.29 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [872c559c] NNlib v0.9.30 [77ba4419] NaNMath v1.1.3 [3bd65402] Optimisers v0.4.6 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.35 ⌃ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [c1ae055f] RealDot v0.1.0 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [12e6b396] RestrictedBoltzmannMachines v5.1.1 [708f8203] Richardson v1.4.2 [79098fc4] Rmath v0.8.0 [7e506255] ScopedValues v1.3.0 [a2af1166] SortingAlgorithms v1.2.1 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.5.1 [aedffcd0] Static v1.2.0 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.5 [4c63d2b9] StatsFuns v1.5.0 [09ab397b] StructArrays v0.7.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [013be700] UnsafeAtomics v0.3.0 [98cad3c8] ValueHistories v0.5.4 [e88e6eb3] Zygote v0.7.10 [700de1a5] ZygoteRules v0.2.7 [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.1+0 [7cb0a576] MPICH_jll v4.3.1+0 [f1f71cc9] MPItrampoline_jll v5.5.4+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.8+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [477f73a3] libaec_jll v1.1.3+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.14.1+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.5.20 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.1+0 [efcefdf7] PCRE2_jll v10.45.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌃ have new versions available and may be upgradable. Testing Running tests... Precompiling packages... 3321.8 ms ✓ Functors 3737.6 ms ✓ Static 1956.6 ms ✓ ChainRulesCore 7094.0 ms ✓ StaticArrayInterface 2198.4 ms ✓ Optimisers 2333.0 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 663.0 ms ✓ ArrayInterface → ArrayInterfaceChainRulesCoreExt 3057.6 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 929.9 ms ✓ EllipsisNotation 815.0 ms ✓ Optimisers → OptimisersAdaptExt 6816.3 ms ✓ RestrictedBoltzmannMachines 11 dependencies successfully precompiled in 33 seconds. 28 already precompiled. Test Summary: | Pass Total Time two | 5 5 1.6s Test Summary: | Pass Total Time inf | 3 3 0.0s Test Summary: | Pass Total Time generate_sequences | 1 1 0.3s Test Summary: | Pass Total Time broadlike | 3 3 3.3s Test Summary: | Pass Total Time wmean | 7 7 13.5s Test Summary: | Pass Total Time wsum | 7 7 1.2s Test Summary: | Pass Total Time reshape_maybe | 12 12 0.4s Test Summary: | Pass Total Time sizedims | 6 6 0.1s Test Summary: | Pass Total Time moving_average | 103 103 0.1s Test Summary: | Pass Total Time vstack | 3 3 1.0s Test Summary: | Pass Total Time convert_eltype | 7 7 1.7s Test Summary: | Pass Total Time linalg | 6 6 7.8s Test Summary: | Pass Total Time onehot | 2102 2102 2.8s Test Summary: | Pass Total Time categorical_rand | 3 3 1.2s Test Summary: | Pass Total Time categorical_sample | 1 1 24.5s Test Summary: | Pass Total Time gumbel | 2 2 0.2s Test Summary: | Pass Total Time categorical_sample_from_logits | 1 1 5.9s Test Summary: | Pass Total Time categorical_sample_from_logits_gumbel | 1 1 1.5s Precompiling packages... 2230.0 ms ✓ QuadGK 1 dependency successfully precompiled in 2 seconds. 14 already precompiled. Precompiling packages... 1271.6 ms ✓ StructArrays 1318.1 ms ✓ ZygoteRules 1011.7 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 727.6 ms ✓ AbstractFFTs → AbstractFFTsChainRulesCoreExt 7217.0 ms ✓ ForwardDiff 759.4 ms ✓ StructArrays → StructArraysLinearAlgebraExt 1047.1 ms ✓ StructArrays → StructArraysSparseArraysExt 693.4 ms ✓ StructArrays → StructArraysAdaptExt 11504.4 ms ✓ ChainRules 81647.3 ms ✓ Zygote 10 dependencies successfully precompiled in 108 seconds. 56 already precompiled. Precompiling packages... 1811.3 ms ✓ ArrayInterface → ArrayInterfaceChainRulesExt 1 dependency successfully precompiled in 2 seconds. 40 already precompiled. Test Summary: | Pass Total Time batches, n=5, m=2, Bv=(), Bh=() | 8 8 1m31.0s Test Summary: | Pass Total Time batches, n=5, m=2, Bv=(), Bh=(3, 2) | 9 9 42.1s Test Summary: | Pass Total Time batches, n=5, m=2, Bv=(3, 2), Bh=() | 9 9 6.9s Test Summary: | Pass Total Time batches, n=5, m=2, Bv=(3, 2), Bh=(3, 2) | 9 9 15.4s Test Summary: | Pass Total Time batches, n=5, m=(3, 4), Bv=(), Bh=() | 8 8 8.6s Test Summary: | Pass Total Time batches, n=5, m=(3, 4), Bv=(), Bh=(3, 2) | 9 9 27.0s Test Summary: | Pass Total Time batches, n=5, m=(3, 4), Bv=(3, 2), Bh=() | 9 9 3.6s Test Summary: | Pass Total Time batches, n=5, m=(3, 4), Bv=(3, 2), Bh=(3, 2) | 9 9 7.7s Test Summary: | Pass Total Time batches, n=(5, 2), m=2, Bv=(), Bh=() | 8 8 3.8s Test Summary: | Pass Total Time batches, n=(5, 2), m=2, Bv=(), Bh=(3, 2) | 9 9 2.6s Test Summary: | Pass Total Time batches, n=(5, 2), m=2, Bv=(3, 2), Bh=() | 9 9 3.1s Test Summary: | Pass Total Time batches, n=(5, 2), m=2, Bv=(3, 2), Bh=(3, 2) | 9 9 7.0s Test Summary: | Pass Total Time batches, n=(5, 2), m=(3, 4), Bv=(), Bh=() | 8 8 3.6s Test Summary: | Pass Total Time batches, n=(5, 2), m=(3, 4), Bv=(), Bh=(3, 2) | 9 9 3.2s Test Summary: | Pass Total Time batches, n=(5, 2), m=(3, 4), Bv=(3, 2), Bh=() | 9 9 3.4s Test Summary: | Pass Total Time batches, n=(5, 2), m=(3, 4), Bv=(3, 2), Bh=(3, 2) | 9 9 8.4s Test Summary: | Pass Total Time singleton batch dims | 14 14 4.6s Test Summary: | Pass Total Time sample_v_from_v and sample_h_from_h on binary RBM | 4 4 10.1s Test Summary: | Pass Total Time rbm convenience constructors | 11 11 1.7s Test Summary: | Pass Total Time Binary-Binary RBM | 60 60 21.4s Test Summary: | Pass Total Time mirror | 5 5 7.5s Test Summary: | Pass Total Time binary free energy | 5 5 1.9s Test Summary: | Pass Total Time Gaussian-Gaussian RBM, 1-dimension | 1 1 12.3s Test Summary: | Pass Total Time Gaussian-Gaussian RBM, multi-dimensional | 8 8 40.0s Test Summary: | Pass Total Time zero hidden units | 1 1 0.0s Test Summary: | Pass Total Time ∂free_energy | 12 12 28.8s Test Summary: | Pass Total Time total_mean_h_from_v, total_mean_v_from_h, etc. | 8 8 10.8s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.Binary | 79 79 53.3s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.Spin | 79 79 40.7s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.Potts | 79 79 30.7s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.Gaussian | 79 79 29.5s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.ReLU | 79 79 37.1s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.dReLU | 79 79 1m28.7s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.pReLU | 79 79 1m41.6s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.xReLU | 79 79 2m11.2s Test Summary: | Pass Total Time discrete layers (RestrictedBoltzmannMachines.Binary) | 2 2 3.3s Test Summary: | Pass Total Time discrete layers (RestrictedBoltzmannMachines.Spin) | 2 2 2.0s Test Summary: | Pass Total Time discrete layers (RestrictedBoltzmannMachines.Potts) | 2 2 1.9s Test Summary: | Pass Total Time Binary | 127 127 7.4s Test Summary: | Pass Total Time Spin | 5 5 5.6s Test Summary: | Pass Total Time Potts | 7 7 8.8s Test Summary: | Pass Total Time Gaussian | 7 7 19.1s Test Summary: | Pass Total Time ReLU | 7 7 16.6s Test Summary: | Pass Total Time pReLU / xReLU / dReLU convert | 41 41 15.8s Test Summary: | Pass Total Time dReLU | 9 9 19.8s Test Summary: | Pass Total Time pReLU | 3 3 1m50.3s Test Summary: | Pass Total Time xReLU | 3 3 2m25.9s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.Binary | 1 1 2.8s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.Spin | 1 1 1.7s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.Potts | 1 1 1.3s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.Gaussian | 1 1 4.0s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.ReLU | 1 1 0.9s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.dReLU | 1 1 5.7s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.pReLU | 1 1 11.0s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.xReLU | 1 1 9.7s Test Summary: | Pass Total Time binary pseudolikelihood | 4 4 7.2s Test Summary: | Pass Total Time spins pseudolikelihood | 4 4 4.6s Test Summary: | Pass Total Time Potts pseudolikelihood | 4 4 5.2s Test Summary: | Pass Total Time nobs | 7 7 0.1s Test Summary: | Pass Total Time getobs | 6 6 1.5s Test Summary: | Pass Total Time shuffleobs | 4 4 0.5s Test Summary: | Pass Total Time infinite_minibatches | 49 49 0.6s Test Summary: | Pass Total Time initialization Binary | 1 1 3.7s Test Summary: | Pass Total Time initialization Spin | 1 1 3.1s Test Summary: | Pass Total Time initialization Potts | 1 1 11.7s Test Summary: | Pass Total Time initialization Gaussian | 2 2 4.5s Test Summary: | Pass Total Time initialization dReLU | 2 2 7.1s Test Summary: | Pass Total Time initialization pReLU | 2 2 2.4s Test Summary: | Pass Total Time initialization xReLU | 2 2 3.2s Test Summary: | Pass Total Time ∂regularize! | 3 3 28.0s Test Summary: | Pass Total Time ∂regularize | 3 3 4.7s Test Summary: | Pass Total Time ∂regularize_fields | 9 9 5.1s Precompiling packages... 1949.8 ms ✓ SortingAlgorithms 2726.1 ms ✓ HypergeometricFunctions 5341.9 ms ✓ StatsBase 3222.3 ms ✓ StatsFuns 10565.1 ms ✓ Distributions 5 dependencies successfully precompiled in 25 seconds. 42 already precompiled. Precompiling packages... 3887.5 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 1 dependency successfully precompiled in 4 seconds. 23 already precompiled. Precompiling packages... 4497.2 ms ✓ Distributions → DistributionsTestExt 1 dependency successfully precompiled in 5 seconds. 49 already precompiled. Precompiling packages... 4180.3 ms ✓ Distributions → DistributionsChainRulesCoreExt 1 dependency successfully precompiled in 5 seconds. 52 already precompiled. Test Summary: | Pass Total Time sqrt1half | 6 6 0.0s Test Summary: | Pass Total Time randnt | 5 5 0.0s Test Summary: | Pass Total Time ∂ operations | 4 4 0.2s Precompiling packages... 13223.6 ms ✓ StaticArrays 1669.3 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1502.9 ms ✓ StaticArrays → StaticArraysStatisticsExt 1580.5 ms ✓ Adapt → AdaptStaticArraysExt 7732.2 ms ✓ KernelAbstractions 3389.7 ms ✓ KernelAbstractions → LinearAlgebraExt 13456.4 ms ✓ NNlib 7 dependencies successfully precompiled in 43 seconds. 26 already precompiled. Precompiling packages... 1847.5 ms ✓ StaticArrayInterface → StaticArrayInterfaceStaticArraysExt 1 dependency successfully precompiled in 2 seconds. 20 already precompiled. Precompiling packages... 1558.3 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1 dependency successfully precompiled in 2 seconds. 10 already precompiled. Precompiling packages... 1789.4 ms ✓ StructArrays → StructArraysStaticArraysExt 1 dependency successfully precompiled in 2 seconds. 19 already precompiled. Precompiling packages... 4309.9 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 1 dependency successfully precompiled in 4 seconds. 21 already precompiled. Precompiling packages... 3332.1 ms ✓ KernelAbstractions → SparseArraysExt 1 dependency successfully precompiled in 4 seconds. 29 already precompiled. Precompiling packages... 3583.4 ms ✓ StructArrays → StructArraysGPUArraysCoreExt 1 dependency successfully precompiled in 4 seconds. 36 already precompiled. Precompiling packages... 3921.1 ms ✓ NNlib → NNlibSpecialFunctionsExt 1 dependency successfully precompiled in 6 seconds. 42 already precompiled. Precompiling packages... 3631.8 ms ✓ NNlib → NNlibForwardDiffExt 1 dependency successfully precompiled in 4 seconds. 49 already precompiled. Test Summary: | Pass Total Time Binary-Binary RBM partition function (brute force) | 3 3 35.1s Test Summary: | Pass Total Time Spin-Binary RBM partition function (brute force) | 3 3 21.4s Test Summary: | Pass Total Time metropolis β=0.5 | 1 1 11.2s Test Summary: | Pass Total Time metropolis β=1.0 | 1 1 7.1s Test Summary: | Pass Total Time metropolis β=2.0 | 1 1 7.1s Test Summary: | Pass Total Time metropolis! β=0.5 | 1 1 7.6s Test Summary: | Pass Total Time metropolis! β=1.0 | 1 1 6.8s Test Summary: | Pass Total Time metropolis! β=2.0 | 1 1 6.8s Test Summary: | Pass Total Time zerosum (visible Potts) | 5 5 12.9s Test Summary: | Pass Total Time zerosum (hidden Potts) | 5 5 5.0s Test Summary: | Pass Total Time zerosum (visible and hidden Potts) | 7 7 13.6s Test Summary: | Pass Total Time zerosum (visible Potts, various hidden layers) | 28 28 29.1s Test Summary: | Pass Total Time rescale_activations! | 10 10 9.4s Test Summary: | Pass Total Time rescale_hidden! | 6 6 8.3s Test Summary: | Pass Total Time rescale_weights! | 2 2 0.9s Test Summary: | Pass Total Time pcd | 3 3 19.7s Test Summary: | Pass Total Time shift_fields | 8 8 4.5s Test Summary: | Pass Total Time shift_fields! | 8 8 1.1s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.Potts | 66 66 2.8s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.PottsGumbel | 66 66 13.4s Test Summary: | Pass Total Time discrete layers (RestrictedBoltzmannMachines.Potts) | 2 2 0.2s Test Summary: | Pass Total Time discrete layers (RestrictedBoltzmannMachines.PottsGumbel) | 2 2 2.0s Test Summary: | Pass Total Time PottsGumbel | 6 6 1.1s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.Potts | 1 1 0.0s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.PottsGumbel | 1 1 1.1s Precompiling packages... 13725.5 ms ✓ HDF5 1 dependency successfully precompiled in 14 seconds. 41 already precompiled. Precompiling packages... 9221.5 ms ✓ RestrictedBoltzmannMachines → HDF5Ext 1 dependency successfully precompiled in 10 seconds. 71 already precompiled. Test Summary: | Pass Total Time rbm | 5 5 12.1s Test Summary: | Pass Total Time layers | 24 24 1.4s Test Summary: | Pass Total Time Gaussian | 6 6 0.8s Test Summary: | Pass Total Time PottsGumbel | 4 4 0.8s Test Summary: | Pass Total Time std | 12 12 1.7s Test Summary: | Pass Total Time CenteredBinaryRBM | 7 7 2.4s Test Summary: | Pass Total Time center / uncenter | 7 7 1.1s Test Summary: | Pass Total Time rbm energy invariance | 2 2 6.2s Test Summary: | Pass Total Time free energy | 1 1 0.7s Test Summary: | Pass Total Time ∂free energy | 3 3 17.6s Test Summary: | Pass Total Time mirror | 5 5 9.8s Test Summary: | Pass Total Time centered pcd | 5 5 46.7s Test Summary: | Pass Total Time centered pcd training | 3 3 12.3s Test Summary: | Pass Total Time ∂regularize! centered RBM | 3 3 40.0s Test Summary: | Pass Total Time ∂regularize! centered RBM | 3 3 46.9s Test Summary: | Pass Total Time ∂regularize! centered RBM | 3 3 43.2s Test Summary: | Pass Total Time shift_fields | 8 8 3.6s Test Summary: | Pass Total Time shift_fields! | 8 8 0.0s Test Summary: | Pass Total Time standardize | 16 16 12.2s Test Summary: | Pass Total Time unstandardize | 3 3 0.1s Test Summary: | Pass Total Time delta_energy | 4 4 0.3s Test Summary: | Pass Total Time standardize! | 6 6 2.1s Test Summary: | Pass Total Time ∂free energy | 8 8 20.2s Test Summary: | Pass Total Time standardized constructor | 2 2 0.2s Test Summary: | Pass Total Time rescale_hidden_activations! | 6 6 8.7s Test Summary: | Pass Total Time standardized pcd | 4 4 32.0s Test Summary: | Pass Total Time exact enumeration of configurations | 20 20 1m19.7s Test Summary: | Pass Total Time ∂regularize! standardized RBM with Binary | 6 6 1m01.1s Test Summary: | Pass Total Time ∂regularize! standardized RBM with ReLU | 6 6 50.2s Test Summary: | Pass Total Time ∂regularize! standardized RBM with dReLU | 6 6 44.2s Test Summary: | Pass Total Time unstandardized_weights | 1 1 0.4s Test Summary: | Pass Total Time weight_norms | 1 1 0.3s Test Summary: | Pass Total Time rescale_weights! std ReLU | 3 3 4.0s Test Summary: | Pass Total Time rescale_weights! std dReLU | 3 3 8.4s Test Summary: | Pass Total Time rescale_weights! std Binary | 2 2 0.1s Test Summary: | Pass Total Time nsReLU convert | 7 7 0.7s Test Summary: | Pass Total Time nsReLU | 2 2 7.5s ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 323 running 1 of 1 signal (10): User defined signal 1 jl_specializations_get_linfo_ at /source/src/gf.c:237 jl_restore_system_image_from_stream_ at /source/src/staticdata.c:4223 jl_restore_package_image_from_stream at /source/src/staticdata.c:4431 jl_restore_incremental_from_buf at /source/src/staticdata.c:4500 ijl_restore_package_image_from_file at /source/src/staticdata.c:4567 #_include_from_serialized#876 at ./loading.jl:1271 _include_from_serialized at ./loading.jl:1247 [inlined] #_require_search_from_serialized#892 at ./loading.jl:2076 _require_search_from_serialized at ./loading.jl:1983 jfptr__require_search_from_serialized_58632.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 __require_prelocked at ./loading.jl:2602 _require_prelocked at ./loading.jl:2468 macro expansion at ./loading.jl:2396 [inlined] macro expansion at ./lock.jl:376 [inlined] __require at ./loading.jl:2360 jfptr___require_71074.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] jl_f_invoke_in_world at /source/src/builtins.c:896 require at ./loading.jl:2336 [inlined] eval_import_path at ./module.jl:36 [inlined] eval_import_path_all at ./module.jl:60 _eval_using at ./module.jl:137 jfptr__eval_using_56857.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 exec_options at ./client.jl:286 _start at ./client.jl:553 jfptr__start_60077.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x74c61f752249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 115 running 1 of 1 signal (10): User defined signal 1 _ZNK4llvm5Value20stripInBoundsOffsetsENS_12function_refIFvPKS0_EEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) stripInBoundsOffsets at /source/usr/include/llvm/IR/Value.h:760 [inlined] MaybeTrackStore at /source/src/llvm-late-gc-lowering.cpp:1581 LocalScan at /source/src/llvm-late-gc-lowering.cpp:1458 runOnFunction at /source/src/llvm-late-gc-lowering.cpp:2587 run at /source/src/llvm-late-gc-lowering.cpp:2639 run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm11PassManagerINS_8FunctionENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm27ModuleToFunctionPassAdaptor3runERNS_6ModuleERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm11PassManagerINS_6ModuleENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/src/pipeline.cpp:791 operator() at /source/src/jitlayers.cpp:1518 withModuleDo<(anonymous namespace)::sizedOptimizerT::operator()(llvm::orc::ThreadSafeModule) [with long unsigned int N = 4]:: > at /source/usr/include/llvm/ExecutionEngine/Orc/ThreadSafeModule.h:136 [inlined] operator() at /source/src/jitlayers.cpp:1479 [inlined] operator() at /source/src/jitlayers.cpp:1631 [inlined] addModule at /source/src/jitlayers.cpp:2088 jl_compile_codeinst_now at /source/src/jitlayers.cpp:683 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:883 jl_compile_method_internal at /source/src/gf.c:3305 _jl_invoke at /source/src/gf.c:3785 [inlined] ijl_apply_generic at /source/src/gf.c:3993 #find_stale_deps#28 at /home/pkgeval/.julia/packages/Aqua/1UuaV/src/stale_deps.jl:50 find_stale_deps at /home/pkgeval/.julia/packages/Aqua/1UuaV/src/stale_deps.jl:45 [inlined] #test_stale_deps#25 at /home/pkgeval/.julia/packages/Aqua/1UuaV/src/stale_deps.jl:30 test_stale_deps at /home/pkgeval/.julia/packages/Aqua/1UuaV/src/stale_deps.jl:29 [inlined] #test_stale_deps#26 at /home/pkgeval/.julia/packages/Aqua/1UuaV/src/stale_deps.jl:35 [inlined] test_stale_deps at /home/pkgeval/.julia/packages/Aqua/1UuaV/src/stale_deps.jl:34 [inlined] macro expansion at /home/pkgeval/.julia/packages/Aqua/1UuaV/src/Aqua.jl:94 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.13/Test/src/Test.jl:1858 [inlined] #test_all#72 at /home/pkgeval/.julia/packages/Aqua/1UuaV/src/Aqua.jl:94 test_all at /home/pkgeval/.julia/packages/Aqua/1UuaV/src/Aqua.jl:59 unknown function (ip: 0x74a438eb2746) at (unknown file) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 _include at ./loading.jl:2908 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_72331.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_eval_module_expr at /source/src/toplevel.c:196 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:658 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 _include at ./loading.jl:2908 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_72331.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 exec_options at ./client.jl:286 _start at ./client.jl:553 jfptr__start_60077.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x74a463a0f249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_57010.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000072d9d609d4b0 Total snapshots: 405. Utilization: 0% ╎405 @Base/task.jl:1129 wait_forever() 404╎ 405 @Base/task.jl:1192 wait() [115] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/RestrictedBoltzmannMachines/TklUE/test/aqua.jl:5 PkgEval terminated after 2735.61s: test duration exceeded the time limit