Package evaluation of GenomicDiversity on Julia 1.13.0-DEV.868 (f2a8e18a98*) started at 2025-07-16T05:14:18.802 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.73s ################################################################################ # Installation # Installing GenomicDiversity... Resolving package versions... Installed libaom_jll ────────────────── v3.11.0+0 Installed libass_jll ────────────────── v0.15.2+0 Installed HarfBuzz_jll ──────────────── v8.5.1+0 Installed ImageIO ───────────────────── v0.6.9 Installed Libuuid_jll ───────────────── v2.41.0+0 Installed MosaicViews ───────────────── v0.3.4 Installed MultivariateStats ─────────── v0.10.3 Installed PolygonOps ────────────────── v0.1.2 Installed Bzip2_jll ─────────────────── v1.0.9+0 Installed MKL_jll ───────────────────── v2025.0.1+1 Installed Libtiff_jll ───────────────── v4.7.1+0 Installed Cairo_jll ─────────────────── v1.18.5+0 Installed Extents ───────────────────── v0.1.6 Installed InlineStrings ─────────────── v1.4.4 Installed OrderedCollections ────────── v1.8.1 Installed NearestNeighbors ──────────── v0.4.22 Installed Graphite2_jll ─────────────── v1.3.15+0 Installed Fontconfig_jll ────────────── v2.16.0+0 Installed SentinelArrays ────────────── v1.4.8 Installed Giflib_jll ────────────────── v5.2.3+0 Installed Distances ─────────────────── v0.10.12 Installed BSON ──────────────────────── v0.3.9 Installed QuadGK ────────────────────── v2.11.2 Installed NaNMath ───────────────────── v1.1.3 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed Graphics ──────────────────── v1.1.3 Installed AdaptivePredicates ────────── v1.2.0 Installed FileIO ────────────────────── v1.17.0 Installed Opus_jll ──────────────────── v1.5.2+0 Installed Ogg_jll ───────────────────── v1.3.6+0 Installed WoodburyMatrices ──────────── v1.0.0 Installed Arpack ────────────────────── v0.5.4 Installed EnumX ─────────────────────── v1.0.5 Installed Tables ────────────────────── v1.12.1 Installed Xorg_libxcb_jll ───────────── v1.17.1+0 Installed LZO_jll ───────────────────── v2.10.3+0 Installed LERC_jll ──────────────────── v4.0.1+0 Installed Reexport ──────────────────── v1.2.2 Installed Missings ──────────────────── v1.2.0 Installed TableTraits ───────────────── v1.0.1 Installed Imath_jll ─────────────────── v3.1.11+0 Installed LLVMOpenMP_jll ────────────── v18.1.8+0 Installed Preferences ───────────────── v1.4.3 Installed SortingAlgorithms ─────────── v1.2.1 Installed RangeArrays ───────────────── v0.3.2 Installed LaTeXStrings ──────────────── v1.4.0 Installed MappedArrays ──────────────── v0.4.2 Installed Crayons ───────────────────── v4.1.1 Installed Grisu ─────────────────────── v1.0.2 Installed Format ────────────────────── v1.3.7 Installed CRlibm ────────────────────── v1.0.2 Installed Inflate ───────────────────── v0.1.5 Installed MacroTools ────────────────── v0.5.16 Installed ColorBrewer ───────────────── v0.4.1 Installed URIs ──────────────────────── v1.6.1 Installed DataStructures ────────────── v0.18.22 Installed FillArrays ────────────────── v1.13.0 Installed Packing ───────────────────── v0.5.1 Installed AbstractTrees ─────────────── v0.4.5 Installed OpenEXR_jll ───────────────── v3.2.4+0 Installed LazyModules ───────────────── v0.3.1 Installed MakieCore ─────────────────── v0.8.6 Installed DelimitedFiles ────────────── v1.9.1 Installed oneTBB_jll ────────────────── v2022.0.0+0 Installed UnicodeFun ────────────────── v0.4.1 Installed x264_jll ──────────────────── v10164.0.1+0 Installed CodecZlib ─────────────────── v0.7.8 Installed StatsBase ─────────────────── v0.34.5 Installed Cairo ─────────────────────── v1.1.1 Installed Observables ───────────────── v0.5.5 Installed Xorg_libXau_jll ───────────── v1.0.13+0 Installed CairoMakie ────────────────── v0.12.9 Installed IntelOpenMP_jll ───────────── v2025.0.4+0 Installed CEnum ─────────────────────── v0.5.0 Installed DataValueInterfaces ───────── v1.0.0 Installed LoggingExtras ─────────────── v1.1.0 Installed Pixman_jll ────────────────── v0.44.2+0 Installed Libffi_jll ────────────────── v3.4.7+0 Installed MathTeXEngine ─────────────── v0.6.5 Installed NamedDims ─────────────────── v1.2.2 Installed Expat_jll ─────────────────── v2.6.5+0 Installed IrrationalConstants ───────── v0.2.4 Installed isoband_jll ───────────────── v0.2.3+0 Installed libpng_jll ────────────────── v1.6.50+0 Installed RoundingEmulator ──────────── v0.2.1 Installed Contour ───────────────────── v0.6.3 Installed SimpleTraits ──────────────── v0.9.4 Installed ImageMetadata ─────────────── v0.9.10 Installed ColorVectorSpace ──────────── v0.10.0 Installed StableRNGs ────────────────── v1.0.3 Installed Interpolations ────────────── v0.16.1 Installed HTTP ──────────────────────── v1.10.17 Installed BitFlags ──────────────────── v0.1.9 Installed libfdk_aac_jll ────────────── v2.0.4+0 Installed libsixel_jll ──────────────── v1.10.5+0 Installed Scratch ───────────────────── v1.3.0 Installed libwebp_jll ───────────────── v1.6.0+0 Installed FFMPEG_jll ────────────────── v6.1.2+0 Installed SimpleBufferStream ────────── v1.2.0 Installed ShaderAbstractions ────────── v0.4.1 Installed PooledArrays ──────────────── v1.4.3 Installed CRlibm_jll ────────────────── v1.0.1+0 Installed PDMats ────────────────────── v0.11.35 Installed WorkerUtilities ───────────── v1.6.1 Installed AxisArrays ────────────────── v0.4.7 Installed PNGFiles ──────────────────── v0.4.4 Installed ImageCore ─────────────────── v0.10.5 Installed TableOperations ───────────── v1.2.0 Installed DocStringExtensions ───────── v0.9.5 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed JpegTurbo ─────────────────── v0.1.6 Installed OpenBLASConsistentFPCSR_jll ─ v0.3.29+0 Installed FreeType ──────────────────── v4.1.1 Installed PkgVersion ────────────────── v0.3.3 Installed RelocatableFolders ────────── v1.0.1 Installed StackViews ────────────────── v0.1.2 Installed KernelDensity ─────────────── v0.6.10 Installed ConcurrentUtilities ───────── v2.5.0 Installed AliasTables ───────────────── v1.1.3 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed SIMD ──────────────────────── v3.7.1 Installed DataAPI ───────────────────── v1.16.0 Installed InvertedIndices ───────────── v1.3.1 Installed Netpbm ────────────────────── v1.1.1 Installed ImageAxes ─────────────────── v0.6.12 Installed Colors ────────────────────── v0.12.11 Installed StaticArraysCore ──────────── v1.4.3 Installed AbstractFFTs ──────────────── v1.5.0 Installed Libglvnd_jll ──────────────── v1.7.1+1 Installed ColorSchemes ──────────────── v3.30.0 Installed StaticArrays ──────────────── v1.9.13 Installed AxisAlgorithms ────────────── v1.1.0 Installed QOI ───────────────────────── v1.0.1 Installed ColorTypes ────────────────── v0.11.5 Installed Glib_jll ──────────────────── v2.84.3+0 Installed StringManipulation ────────── v0.4.1 Installed Requires ──────────────────── v1.3.1 Installed BaseDirs ──────────────────── v1.3.1 Installed LogExpFunctions ───────────── v0.3.29 Installed JSON ──────────────────────── v0.21.4 Installed FreeTypeAbstraction ───────── v0.10.8 Installed PrettyTables ──────────────── v2.4.0 Installed Parsers ───────────────────── v2.8.3 Installed Rmath ─────────────────────── v0.8.0 Installed Arpack_jll ────────────────── v3.5.1+1 Installed Distributions ─────────────── v0.25.120 Installed GeoFormatTypes ────────────── v0.4.4 Installed FilePaths ─────────────────── v0.8.3 Installed StatsFuns ─────────────────── v1.5.0 Installed Unitful ───────────────────── v1.23.1 Installed CSV ───────────────────────── v0.10.15 Installed GridLayoutBase ────────────── v0.11.1 Installed OpenEXR ───────────────────── v0.3.3 Installed Xorg_libXdmcp_jll ─────────── v1.1.6+0 Installed WeakRefStrings ────────────── v1.4.2 Installed SignedDistanceFields ──────── v0.4.0 Installed DataFrames ────────────────── v1.7.0 Installed XZ_jll ────────────────────── v5.8.1+0 Installed JLLWrappers ───────────────── v1.7.0 Installed x265_jll ──────────────────── v3.6.0+0 Installed GeometryBasics ────────────── v0.4.11 Installed Pango_jll ─────────────────── v1.56.3+0 Installed ExactPredicates ───────────── v2.2.8 Installed IterTools ─────────────────── v1.10.0 Installed Xorg_xtrans_jll ───────────── v1.6.0+0 Installed FilePathsBase ─────────────── v0.9.24 Installed JpegTurbo_jll ─────────────── v3.1.1+0 Installed TiffImages ────────────────── v0.11.4 Installed PaddedViews ───────────────── v0.5.12 Installed DataDeps ──────────────────── v0.7.13 Installed Adapt ─────────────────────── v4.3.0 Installed ConstructionBase ──────────── v1.6.0 Installed TriplotBase ───────────────── v0.1.0 Installed Libmount_jll ──────────────── v2.41.0+0 Installed HypergeometricFunctions ───── v0.3.28 Installed ExceptionUnwrapping ───────── v0.1.11 Installed TranscodingStreams ────────── v0.11.3 Installed Sixel ─────────────────────── v0.1.5 Installed Xorg_libX11_jll ───────────── v1.8.12+0 Installed PlotUtils ─────────────────── v1.4.3 Installed Compat ────────────────────── v4.17.0 Installed TensorCore ────────────────── v0.1.1 Installed EarCut_jll ────────────────── v2.2.4+0 Installed ImageBase ─────────────────── v0.1.7 Installed Statistics ────────────────── v1.11.1 Installed PrecompileTools ───────────── v1.3.2 Installed StatsAPI ──────────────────── v1.7.1 Installed StructArrays ──────────────── v0.6.21 Installed Impute ────────────────────── v0.6.12 Installed OffsetArrays ──────────────── v1.17.0 Installed MbedTLS ───────────────────── v1.1.9 Installed ProgressMeter ─────────────── v1.10.4 Installed OpenSSL ───────────────────── v1.5.0 Installed WebP ──────────────────────── v0.1.3 Installed Ratios ────────────────────── v0.4.5 Installed ChainRulesCore ────────────── v1.25.2 Installed GettextRuntime_jll ────────── v0.22.4+0 Installed FriBidi_jll ───────────────── v1.0.17+0 Installed LAME_jll ──────────────────── v3.100.3+0 Installed Xorg_libXrender_jll ───────── v0.9.12+0 Installed Isoband ───────────────────── v0.1.1 Installed libvorbis_jll ─────────────── v1.3.8+0 Installed Animations ────────────────── v0.4.2 Installed IntervalArithmetic ────────── v0.22.36 Installed PtrArrays ─────────────────── v1.3.0 Installed SpecialFunctions ──────────── v2.5.1 Installed IntervalSets ──────────────── v0.7.11 Installed Showoff ───────────────────── v1.0.3 Installed FixedPointNumbers ─────────── v0.8.5 Installed FreeType2_jll ─────────────── v2.13.4+0 Installed GenomicDiversity ──────────── v0.2.2 Installed FFTW ──────────────────────── v1.9.0 Installed FFTW_jll ──────────────────── v3.3.11+0 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed MbedTLS_jll ───────────────── v2.28.6+2 Installed Automa ────────────────────── v1.1.0 Installed Xorg_libXext_jll ──────────── v1.3.7+0 Installed GeoInterface ──────────────── v1.4.1 Installed IndirectArrays ────────────── v1.0.0 Installed Makie ─────────────────────── v0.21.9 Installed DelaunayTriangulation ─────── v1.6.4 Installing 56 artifacts Installed artifact isoband 25.7 KiB Installed artifact libsixel 177.3 KiB Installed artifact libass 372.4 KiB Installed artifact Bzip2 503.5 KiB Installed artifact oneTBB 435.6 KiB Installed artifact Fontconfig 522.5 KiB Installed artifact HarfBuzz 1.7 MiB Installed artifact libpng 328.4 KiB Installed artifact Graphite2 120.2 KiB Installed artifact Xorg_libXext 699.9 KiB Installed artifact EarCut 80.5 KiB Installed artifact Libiconv 1.9 MiB Installed artifact CRlibm 169.5 KiB Installed artifact Ogg 250.3 KiB Installed artifact Opus 925.5 KiB Installed artifact LLVMOpenMP 661.6 KiB Installed artifact Xorg_libxcb 2.1 MiB Installed artifact Expat 271.4 KiB Installed artifact Libuuid 3.5 MiB Installed artifact GettextRuntime 543.0 KiB Installed artifact Pixman 372.2 KiB Installed artifact XZ 1.5 MiB Installed artifact Pango 1.1 MiB Installed artifact libvorbis 271.0 KiB Installed artifact LERC 272.9 KiB Installed artifact MbedTLS 2.1 MiB Installed artifact Xorg_libX11 13.9 MiB Installed artifact Xorg_xtrans 48.2 KiB Installed artifact Xorg_libXdmcp 67.7 KiB Installed artifact libwebp 2.6 MiB Installed artifact libfdk_aac 2.8 MiB Installed artifact Rmath 121.9 KiB Installed artifact LAME 292.5 KiB Installed artifact Libglvnd 833.5 KiB Installed artifact FFTW 2.2 MiB Installed artifact x264 2.1 MiB Installed artifact Imath 182.8 KiB Installed artifact OpenBLASConsistentFPCSR 9.9 MiB Installed artifact OpenEXR 1.9 MiB Installed artifact Libffi 44.2 KiB Installed artifact FreeType2 1.5 MiB Installed artifact JpegTurbo 1.6 MiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact FriBidi 78.9 KiB Installed artifact Arpack 147.2 KiB Installed artifact Giflib 154.6 KiB Installed artifact Glib 7.7 MiB Installed artifact Xorg_libXrender 435.9 KiB Installed artifact LZO 208.9 KiB Installed artifact Xorg_libXau 36.6 KiB Installed artifact Cairo 2.2 MiB Installed artifact x265 1.4 MiB Installed artifact Libtiff 3.2 MiB Installed artifact libaom 6.4 MiB Installed artifact FFMPEG 11.0 MiB Installed artifact Libmount 6.4 MiB Updating `~/.julia/environments/v1.13/Project.toml` [594eec9e] + GenomicDiversity v0.2.2 Updating `~/.julia/environments/v1.13/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] + Adapt v4.3.0 [35492f91] + AdaptivePredicates v1.2.0 [66dad0bd] + AliasTables v1.1.3 [27a7e980] + Animations v0.4.2 [7d9fca2a] + Arpack v0.5.4 [67c07d97] + Automa v1.1.0 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.7 [fbb218c0] + BSON v0.3.9 [18cc8868] + BaseDirs v1.3.1 [d1d4a3ce] + BitFlags v0.1.9 [fa961155] + CEnum v0.5.0 [96374032] + CRlibm v1.0.2 [336ed68f] + CSV v0.10.15 [159f3aea] + Cairo v1.1.1 ⌅ [13f3f980] + CairoMakie v0.12.9 [d360d2e6] + ChainRulesCore v1.25.2 [944b1d66] + CodecZlib v0.7.8 [a2cac450] + ColorBrewer v0.4.1 [35d6a980] + ColorSchemes v3.30.0 ⌅ [3da002f7] + ColorTypes v0.11.5 ⌃ [c3611d14] + ColorVectorSpace v0.10.0 ⌅ [5ae59095] + Colors v0.12.11 [34da2185] + Compat v4.17.0 [f0e56b4a] + ConcurrentUtilities v2.5.0 [187b0558] + ConstructionBase v1.6.0 [d38c429a] + Contour v0.6.3 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [124859b0] + DataDeps v0.7.13 [a93c6f00] + DataFrames v1.7.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [927a84f5] + DelaunayTriangulation v1.6.4 [8bb1440f] + DelimitedFiles v1.9.1 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [429591f6] + ExactPredicates v2.2.8 [460bff9d] + ExceptionUnwrapping v0.1.11 [411431e0] + Extents v0.1.6 [7a1cc6ca] + FFTW v1.9.0 [5789e2e9] + FileIO v1.17.0 ⌅ [8fc22ac5] + FilePaths v0.8.3 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.13.0 [53c48c17] + FixedPointNumbers v0.8.5 [1fa38f19] + Format v1.3.7 [b38be410] + FreeType v4.1.1 [663a7486] + FreeTypeAbstraction v0.10.8 [594eec9e] + GenomicDiversity v0.2.2 [68eda718] + GeoFormatTypes v0.4.4 ⌃ [cf35fbd7] + GeoInterface v1.4.1 ⌅ [5c1252a2] + GeometryBasics v0.4.11 [a2bd30eb] + Graphics v1.1.3 [3955a311] + GridLayoutBase v0.11.1 [42e2da0e] + Grisu v1.0.2 [cd3eb016] + HTTP v1.10.17 [34004b35] + HypergeometricFunctions v0.3.28 [2803e5a7] + ImageAxes v0.6.12 [c817782e] + ImageBase v0.1.7 [a09fc81d] + ImageCore v0.10.5 [82e4d734] + ImageIO v0.6.9 [bc367c6b] + ImageMetadata v0.9.10 [f7bf1975] + Impute v0.6.12 [9b13fd28] + IndirectArrays v1.0.0 [d25df0c9] + Inflate v0.1.5 [842dd82b] + InlineStrings v1.4.4 [a98d9a8b] + Interpolations v0.16.1 [d1acc4aa] + IntervalArithmetic v0.22.36 [8197267c] + IntervalSets v0.7.11 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [f1662d9f] + Isoband v0.1.1 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] + JSON v0.21.4 [b835a17e] + JpegTurbo v0.1.6 [5ab0869b] + KernelDensity v0.6.10 [b964fa9f] + LaTeXStrings v1.4.0 [8cdb02fc] + LazyModules v0.3.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.1.0 [1914dd2f] + MacroTools v0.5.16 ⌅ [ee78f7c6] + Makie v0.21.9 ⌅ [20f20a25] + MakieCore v0.8.6 [dbb5928d] + MappedArrays v0.4.2 [0a4f8689] + MathTeXEngine v0.6.5 [739be429] + MbedTLS v1.1.9 [e1d29d7a] + Missings v1.2.0 [e94cdb99] + MosaicViews v0.3.4 [6f286f6a] + MultivariateStats v0.10.3 [77ba4419] + NaNMath v1.1.3 [356022a1] + NamedDims v1.2.2 [b8a86587] + NearestNeighbors v0.4.22 [f09324ee] + Netpbm v1.1.1 [510215fc] + Observables v0.5.5 [6fe1bfb0] + OffsetArrays v1.17.0 [52e1d378] + OpenEXR v0.3.3 [4d8831e6] + OpenSSL v1.5.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [f57f5aa1] + PNGFiles v0.4.4 [19eb6ba3] + Packing v0.5.1 [5432bcbf] + PaddedViews v0.5.12 [69de0a69] + Parsers v2.8.3 [eebad327] + PkgVersion v0.3.3 [995b91a9] + PlotUtils v1.4.3 [647866c9] + PolygonOps v0.1.2 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [92933f4c] + ProgressMeter v1.10.4 [43287f4e] + PtrArrays v1.3.0 [4b34888f] + QOI v1.0.1 [1fd47b50] + QuadGK v2.11.2 [b3c3ace0] + RangeArrays v0.3.2 [c84ed2f1] + Ratios v0.4.5 [189a3867] + Reexport v1.2.2 [05181044] + RelocatableFolders v1.0.1 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [5eaf0fd0] + RoundingEmulator v0.2.1 [fdea26ae] + SIMD v3.7.1 [6c6a2e73] + Scratch v1.3.0 [91c51154] + SentinelArrays v1.4.8 ⌅ [65257c39] + ShaderAbstractions v0.4.1 [992d4aef] + Showoff v1.0.3 [73760f76] + SignedDistanceFields v0.4.0 [777ac1f9] + SimpleBufferStream v1.2.0 [699a6c99] + SimpleTraits v0.9.4 [45858cf5] + Sixel v0.1.5 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.1 [860ef19b] + StableRNGs v1.0.3 [cae243ae] + StackViews v0.1.2 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.5 [4c63d2b9] + StatsFuns v1.5.0 [892a3eda] + StringManipulation v0.4.1 ⌅ [09ab397b] + StructArrays v0.6.21 [ab02a1b2] + TableOperations v1.2.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [62fd8b95] + TensorCore v0.1.1 [731e570b] + TiffImages v0.11.4 [3bb67fe8] + TranscodingStreams v0.11.3 [981d1d27] + TriplotBase v0.1.0 [5c2747f8] + URIs v1.6.1 [1cfade01] + 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libpng_jll v1.6.50+0 [075b6546] + libsixel_jll v1.10.5+0 [f27f6e37] + libvorbis_jll v1.3.8+0 [c5f90fcd] + libwebp_jll v1.6.0+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [1270edf5] + x264_jll v10164.0.1+0 ⌅ [dfaa095f] + x265_jll v3.6.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [8bf52ea8] + CRC32c v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.14.1+1 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.5.20 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [efcefdf7] + PCRE2_jll v10.45.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 29.27s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4615.1 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 26 already precompiled. Precompiling package dependencies... ERROR: LoadError: The following 2 direct dependencies failed to precompile: GenomicDiversity Failed to precompile GenomicDiversity [594eec9e-a086-4631-8fc7-61104af37930] to "/home/pkgeval/.julia/compiled/v1.13/GenomicDiversity/jl_EJOiZr" (ProcessExited(1)). ERROR: LoadError: FieldError: type Core.TypeName has no field `mt`, available fields: `name`, `module`, `singletonname`, `names`, `atomicfields`, `constfields`, `wrapper`, `Typeofwrapper`, `cache`, `linearcache`, `partial`, `hash`, `max_args`, `n_uninitialized`, `flags`, `cache_entry_count`, `max_methods`, `constprop_heuristic` Stacktrace: [1] getproperty(x::Core.TypeName, f::Symbol) @ Base ./Base_compiler.jl:57 [2] func2string(func::typeof(MakieCore.linesegments)) @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/recipes.jl:9 [3] plotkey(::Type{MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}}) @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/recipes.jl:21 [4] plotkey(::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}) @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/recipes.jl:22 [5] get_attribute(dict::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}, key::Symbol, default::Nothing) @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/attributes.jl:237 [6] get_attribute(dict::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}, key::Symbol) @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/attributes.jl:234 [7] draw_atomic(scene::Makie.Scene, screen::CairoMakie.Screen{CairoMakie.IMAGE}, primitive::Union{MakieCore.Lines, MakieCore.LineSegments}) @ CairoMakie ~/.julia/packages/CairoMakie/ramgi/src/primitives.jl:6 [8] draw_plot(scene::Makie.Scene, screen::CairoMakie.Screen{CairoMakie.IMAGE}, primitive::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}) @ CairoMakie ~/.julia/packages/CairoMakie/ramgi/src/infrastructure.jl:129 [9] cairo_draw(screen::CairoMakie.Screen{CairoMakie.IMAGE}, scene::Makie.Scene) @ CairoMakie ~/.julia/packages/CairoMakie/ramgi/src/infrastructure.jl:51 [10] colorbuffer(screen::CairoMakie.Screen{CairoMakie.IMAGE}) @ CairoMakie ~/.julia/packages/CairoMakie/ramgi/src/screen.jl:345 [11] colorbuffer(screen::CairoMakie.Screen{CairoMakie.IMAGE}, format::Makie.ImageStorageFormat) @ Makie ~/.julia/packages/Makie/8h0bl/src/display.jl:392 [12] colorbuffer(fig::Makie.FigureAxisPlot, format::Makie.ImageStorageFormat; update::Bool, backend::Module, screen_config::@Kwargs{}) @ Makie ~/.julia/packages/Makie/8h0bl/src/display.jl:476 [13] colorbuffer @ ~/.julia/packages/Makie/8h0bl/src/display.jl:467 [inlined] [14] colorbuffer(fig::Makie.FigureAxisPlot) @ Makie ~/.julia/packages/Makie/8h0bl/src/display.jl:467 [15] top-level scope @ ~/.julia/packages/Makie/8h0bl/precompile/shared-precompile.jl:6 [16] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [17] top-level scope @ ~/.julia/packages/CairoMakie/ramgi/src/precompiles.jl:11 [18] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [19] macro expansion @ ~/.julia/packages/CairoMakie/ramgi/src/precompiles.jl:15 [inlined] [20] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [21] top-level scope @ ~/.julia/packages/CairoMakie/ramgi/src/CairoMakie.jl:37 [22] include(mod::Module, _path::String) @ Base ./Base.jl:309 [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3002 [24] top-level scope @ stdin:5 [25] eval(m::Module, e::Any) @ Core ./boot.jl:489 [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [27] include_string @ ./loading.jl:2858 [inlined] [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [29] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/Makie/8h0bl/precompile/shared-precompile.jl:4 in expression starting at /home/pkgeval/.julia/packages/CairoMakie/ramgi/src/precompiles.jl:10 in expression starting at /home/pkgeval/.julia/packages/CairoMakie/ramgi/src/CairoMakie.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile CairoMakie [13f3f980-e62b-5c42-98c6-ff1f3baf88f0] to "/home/pkgeval/.julia/compiled/v1.13/CairoMakie/jl_QxeMWf" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3289 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2654 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#236 @ ./reflection.jl:1333 [inlined] [8] invokelatest_gr @ ./reflection.jl:1325 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3860 [10] maybe_cachefile_lock @ ./loading.jl:3857 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2640 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2468 [13] macro expansion @ ./loading.jl:2396 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2360 [16] require @ ./loading.jl:2336 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [20] top-level scope @ ~/.julia/packages/GenomicDiversity/RMbwK/src/GenomicDiversity.jl:55 [21] include(mod::Module, _path::String) @ Base ./Base.jl:309 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3002 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [26] include_string @ ./loading.jl:2858 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [28] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/GenomicDiversity/RMbwK/src/GenomicDiversity.jl:24 in expression starting at stdin:5 CairoMakie Failed to precompile CairoMakie [13f3f980-e62b-5c42-98c6-ff1f3baf88f0] to "/home/pkgeval/.julia/compiled/v1.13/CairoMakie/jl_VuPbKK" (ProcessExited(1)). ERROR: LoadError: FieldError: type Core.TypeName has no field `mt`, available fields: `name`, `module`, `singletonname`, `names`, `atomicfields`, `constfields`, `wrapper`, `Typeofwrapper`, `cache`, `linearcache`, `partial`, `hash`, `max_args`, `n_uninitialized`, `flags`, `cache_entry_count`, `max_methods`, `constprop_heuristic` Stacktrace: [1] getproperty(x::Core.TypeName, f::Symbol) @ Base ./Base_compiler.jl:57 [2] func2string(func::typeof(MakieCore.linesegments)) @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/recipes.jl:9 [3] plotkey(::Type{MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}}) @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/recipes.jl:21 [4] plotkey(::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}) @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/recipes.jl:22 [5] get_attribute(dict::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}, key::Symbol, default::Nothing) @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/attributes.jl:237 [6] get_attribute(dict::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}, key::Symbol) @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/attributes.jl:234 [7] draw_atomic(scene::Makie.Scene, screen::CairoMakie.Screen{CairoMakie.IMAGE}, primitive::Union{MakieCore.Lines, MakieCore.LineSegments}) @ CairoMakie ~/.julia/packages/CairoMakie/ramgi/src/primitives.jl:6 [8] draw_plot(scene::Makie.Scene, screen::CairoMakie.Screen{CairoMakie.IMAGE}, primitive::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}) @ CairoMakie ~/.julia/packages/CairoMakie/ramgi/src/infrastructure.jl:129 [9] cairo_draw(screen::CairoMakie.Screen{CairoMakie.IMAGE}, scene::Makie.Scene) @ CairoMakie ~/.julia/packages/CairoMakie/ramgi/src/infrastructure.jl:51 [10] colorbuffer(screen::CairoMakie.Screen{CairoMakie.IMAGE}) @ CairoMakie ~/.julia/packages/CairoMakie/ramgi/src/screen.jl:345 [11] colorbuffer(screen::CairoMakie.Screen{CairoMakie.IMAGE}, format::Makie.ImageStorageFormat) @ Makie ~/.julia/packages/Makie/8h0bl/src/display.jl:392 [12] colorbuffer(fig::Makie.FigureAxisPlot, format::Makie.ImageStorageFormat; update::Bool, backend::Module, screen_config::@Kwargs{}) @ Makie ~/.julia/packages/Makie/8h0bl/src/display.jl:476 [13] colorbuffer @ ~/.julia/packages/Makie/8h0bl/src/display.jl:467 [inlined] [14] colorbuffer(fig::Makie.FigureAxisPlot) @ Makie ~/.julia/packages/Makie/8h0bl/src/display.jl:467 [15] top-level scope @ ~/.julia/packages/Makie/8h0bl/precompile/shared-precompile.jl:6 [16] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [17] top-level scope @ ~/.julia/packages/CairoMakie/ramgi/src/precompiles.jl:11 [18] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [19] macro expansion @ ~/.julia/packages/CairoMakie/ramgi/src/precompiles.jl:15 [inlined] [20] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [21] top-level scope @ ~/.julia/packages/CairoMakie/ramgi/src/CairoMakie.jl:37 [22] include(mod::Module, _path::String) @ Base ./Base.jl:309 [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3002 [24] top-level scope @ stdin:5 [25] eval(m::Module, e::Any) @ Core ./boot.jl:489 [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [27] include_string @ ./loading.jl:2858 [inlined] [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [29] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/Makie/8h0bl/precompile/shared-precompile.jl:4 in expression starting at /home/pkgeval/.julia/packages/CairoMakie/ramgi/src/precompiles.jl:10 in expression starting at /home/pkgeval/.julia/packages/CairoMakie/ramgi/src/CairoMakie.jl:1 in expression starting at stdin:5 in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 1427.05s ################################################################################ # Testing # Testing GenomicDiversity Status `/tmp/jl_oxkisN/Project.toml` [336ed68f] CSV v0.10.15 ⌅ [13f3f980] CairoMakie v0.12.9 [a93c6f00] DataFrames v1.7.0 [8bb1440f] DelimitedFiles v1.9.1 [594eec9e] GenomicDiversity v0.2.2 [f7bf1975] Impute v0.6.12 [6f286f6a] MultivariateStats v0.10.3 [8dfed614] Test v1.11.0 Status `/tmp/jl_oxkisN/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [79e6a3ab] Adapt v4.3.0 [35492f91] AdaptivePredicates v1.2.0 [66dad0bd] AliasTables v1.1.3 [27a7e980] Animations v0.4.2 [7d9fca2a] Arpack v0.5.4 [67c07d97] Automa v1.1.0 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.7 [fbb218c0] BSON v0.3.9 [18cc8868] BaseDirs v1.3.1 [d1d4a3ce] BitFlags v0.1.9 [fa961155] CEnum v0.5.0 [96374032] CRlibm v1.0.2 [336ed68f] CSV v0.10.15 [159f3aea] Cairo v1.1.1 ⌅ [13f3f980] CairoMakie v0.12.9 [d360d2e6] ChainRulesCore v1.25.2 [944b1d66] CodecZlib v0.7.8 [a2cac450] ColorBrewer v0.4.1 [35d6a980] ColorSchemes v3.30.0 ⌅ [3da002f7] ColorTypes v0.11.5 ⌃ [c3611d14] ColorVectorSpace v0.10.0 ⌅ [5ae59095] Colors v0.12.11 [34da2185] Compat v4.17.0 [f0e56b4a] ConcurrentUtilities v2.5.0 [187b0558] ConstructionBase v1.6.0 [d38c429a] Contour v0.6.3 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [124859b0] DataDeps v0.7.13 [a93c6f00] DataFrames v1.7.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [927a84f5] DelaunayTriangulation v1.6.4 [8bb1440f] DelimitedFiles v1.9.1 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.5 [429591f6] ExactPredicates v2.2.8 [460bff9d] ExceptionUnwrapping v0.1.11 [411431e0] Extents v0.1.6 [7a1cc6ca] FFTW v1.9.0 [5789e2e9] FileIO v1.17.0 ⌅ [8fc22ac5] FilePaths v0.8.3 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.13.0 [53c48c17] FixedPointNumbers v0.8.5 [1fa38f19] Format v1.3.7 [b38be410] FreeType v4.1.1 [663a7486] FreeTypeAbstraction v0.10.8 [594eec9e] GenomicDiversity v0.2.2 [68eda718] GeoFormatTypes v0.4.4 ⌃ [cf35fbd7] GeoInterface v1.4.1 ⌅ [5c1252a2] GeometryBasics v0.4.11 [a2bd30eb] Graphics v1.1.3 [3955a311] GridLayoutBase v0.11.1 [42e2da0e] Grisu v1.0.2 [cd3eb016] HTTP v1.10.17 [34004b35] HypergeometricFunctions v0.3.28 [2803e5a7] ImageAxes v0.6.12 [c817782e] ImageBase v0.1.7 [a09fc81d] ImageCore v0.10.5 [82e4d734] ImageIO v0.6.9 [bc367c6b] ImageMetadata v0.9.10 [f7bf1975] Impute v0.6.12 [9b13fd28] IndirectArrays v1.0.0 [d25df0c9] Inflate v0.1.5 [842dd82b] InlineStrings v1.4.4 [a98d9a8b] Interpolations v0.16.1 [d1acc4aa] IntervalArithmetic v0.22.36 [8197267c] IntervalSets v0.7.11 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.4 [f1662d9f] Isoband v0.1.1 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [b835a17e] JpegTurbo v0.1.6 [5ab0869b] KernelDensity v0.6.10 [b964fa9f] LaTeXStrings v1.4.0 [8cdb02fc] LazyModules v0.3.1 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.1.0 [1914dd2f] MacroTools v0.5.16 ⌅ [ee78f7c6] Makie v0.21.9 ⌅ [20f20a25] MakieCore v0.8.6 [dbb5928d] MappedArrays v0.4.2 [0a4f8689] MathTeXEngine v0.6.5 [739be429] MbedTLS v1.1.9 [e1d29d7a] Missings v1.2.0 [e94cdb99] MosaicViews v0.3.4 [6f286f6a] MultivariateStats v0.10.3 [77ba4419] NaNMath v1.1.3 [356022a1] NamedDims v1.2.2 [b8a86587] NearestNeighbors v0.4.22 [f09324ee] Netpbm v1.1.1 [510215fc] Observables v0.5.5 [6fe1bfb0] OffsetArrays v1.17.0 [52e1d378] OpenEXR v0.3.3 [4d8831e6] OpenSSL v1.5.0 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.35 [f57f5aa1] PNGFiles v0.4.4 [19eb6ba3] Packing v0.5.1 [5432bcbf] PaddedViews v0.5.12 [69de0a69] Parsers v2.8.3 [eebad327] PkgVersion v0.3.3 [995b91a9] PlotUtils v1.4.3 [647866c9] PolygonOps v0.1.2 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [92933f4c] ProgressMeter v1.10.4 [43287f4e] PtrArrays v1.3.0 [4b34888f] QOI v1.0.1 [1fd47b50] QuadGK v2.11.2 [b3c3ace0] RangeArrays v0.3.2 [c84ed2f1] Ratios v0.4.5 [189a3867] Reexport v1.2.2 [05181044] RelocatableFolders v1.0.1 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.8.0 [5eaf0fd0] RoundingEmulator v0.2.1 [fdea26ae] SIMD v3.7.1 [6c6a2e73] Scratch v1.3.0 [91c51154] SentinelArrays v1.4.8 ⌅ [65257c39] ShaderAbstractions v0.4.1 [992d4aef] Showoff v1.0.3 [73760f76] SignedDistanceFields v0.4.0 [777ac1f9] SimpleBufferStream v1.2.0 [699a6c99] SimpleTraits v0.9.4 [45858cf5] Sixel v0.1.5 [a2af1166] SortingAlgorithms v1.2.1 [276daf66] SpecialFunctions v2.5.1 [860ef19b] StableRNGs v1.0.3 [cae243ae] StackViews v0.1.2 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.5 [4c63d2b9] StatsFuns v1.5.0 [892a3eda] StringManipulation v0.4.1 ⌅ [09ab397b] StructArrays v0.6.21 [ab02a1b2] TableOperations v1.2.0 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [62fd8b95] TensorCore v0.1.1 [731e570b] TiffImages v0.11.4 [3bb67fe8] TranscodingStreams v0.11.3 [981d1d27] TriplotBase v0.1.0 [5c2747f8] URIs v1.6.1 [1cfade01] UnicodeFun v0.4.1 [1986cc42] Unitful v1.23.1 [ea10d353] WeakRefStrings v1.4.2 [e3aaa7dc] WebP v0.1.3 [efce3f68] WoodburyMatrices v1.0.0 [76eceee3] WorkerUtilities v1.6.1 ⌅ [68821587] Arpack_jll v3.5.1+1 [6e34b625] Bzip2_jll v1.0.9+0 [4e9b3aee] CRlibm_jll v1.0.1+0 [83423d85] Cairo_jll v1.18.5+0 [5ae413db] EarCut_jll v2.2.4+0 [2e619515] Expat_jll v2.6.5+0 ⌅ [b22a6f82] FFMPEG_jll v6.1.2+0 [f5851436] FFTW_jll v3.3.11+0 [a3f928ae] Fontconfig_jll v2.16.0+0 [d7e528f0] FreeType2_jll v2.13.4+0 [559328eb] FriBidi_jll v1.0.17+0 [b0724c58] GettextRuntime_jll v0.22.4+0 [59f7168a] Giflib_jll v5.2.3+0 [7746bdde] Glib_jll v2.84.3+0 [3b182d85] Graphite2_jll v1.3.15+0 [2e76f6c2] HarfBuzz_jll v8.5.1+0 [905a6f67] Imath_jll v3.1.11+0 [1d5cc7b8] IntelOpenMP_jll v2025.0.4+0 [aacddb02] JpegTurbo_jll v3.1.1+0 [c1c5ebd0] LAME_jll v3.100.3+0 [88015f11] LERC_jll v4.0.1+0 [1d63c593] LLVMOpenMP_jll v18.1.8+0 [dd4b983a] LZO_jll v2.10.3+0 [e9f186c6] Libffi_jll v3.4.7+0 [7e76a0d4] Libglvnd_jll v1.7.1+1 [94ce4f54] Libiconv_jll v1.18.0+0 [4b2f31a3] Libmount_jll v2.41.0+0 [89763e89] Libtiff_jll v4.7.1+0 [38a345b3] Libuuid_jll v2.41.0+0 [856f044c] MKL_jll v2025.0.1+1 [c8ffd9c3] MbedTLS_jll v2.28.6+2 [e7412a2a] Ogg_jll v1.3.6+0 [6cdc7f73] OpenBLASConsistentFPCSR_jll v0.3.29+0 [18a262bb] OpenEXR_jll v3.2.4+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [91d4177d] Opus_jll v1.5.2+0 [36c8627f] Pango_jll v1.56.3+0 ⌅ [30392449] Pixman_jll v0.44.2+0 [f50d1b31] Rmath_jll v0.5.1+0 [ffd25f8a] XZ_jll v5.8.1+0 [4f6342f7] Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] Xorg_libXau_jll v1.0.13+0 [a3789734] Xorg_libXdmcp_jll v1.1.6+0 [1082639a] Xorg_libXext_jll v1.3.7+0 [ea2f1a96] Xorg_libXrender_jll v0.9.12+0 [c7cfdc94] Xorg_libxcb_jll v1.17.1+0 [c5fb5394] Xorg_xtrans_jll v1.6.0+0 [9a68df92] isoband_jll v0.2.3+0 [a4ae2306] libaom_jll v3.11.0+0 ⌅ [0ac62f75] libass_jll v0.15.2+0 [f638f0a6] libfdk_aac_jll v2.0.4+0 [b53b4c65] libpng_jll v1.6.50+0 [075b6546] libsixel_jll v1.10.5+0 [f27f6e37] libvorbis_jll v1.3.8+0 [c5f90fcd] libwebp_jll v1.6.0+0 [1317d2d5] oneTBB_jll v2022.0.0+0 [1270edf5] x264_jll v10164.0.1+0 ⌅ [dfaa095f] x265_jll v3.6.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [8bf52ea8] CRC32c v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.14.1+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.5.20 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.1+0 [efcefdf7] PCRE2_jll v10.45.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling packages... ✗ CairoMakie Info Given GenomicDiversity was explicitly requested, output will be shown live  WARNING: importing deprecated binding Makie.ContinuousSurface into CairoMakie. , use VertexGrid instead. WARNING: importing deprecated binding Makie.DiscreteSurface into CairoMakie. , use CellGrid instead. ERROR: LoadError: FieldError: type Core.TypeName has no field `mt`, available fields: `name`, `module`, `singletonname`, `names`, `atomicfields`, `constfields`, `wrapper`, `Typeofwrapper`, `cache`, `linearcache`, `partial`, `hash`, `max_args`, `n_uninitialized`, `flags`, `cache_entry_count`, `max_methods`, `constprop_heuristic` Stacktrace:  [1] getproperty(x::Core.TypeName, f::Symbol)  @ Base ./Base_compiler.jl:57  [2] func2string(func::typeof(MakieCore.linesegments))  @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/recipes.jl:9  [3] plotkey(::Type{MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}})  @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/recipes.jl:21  [4] plotkey(::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}})  @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/recipes.jl:22  [5] get_attribute(dict::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}, key::Symbol, default::Nothing)  @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/attributes.jl:237  [6] get_attribute(dict::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}, key::Symbol)  @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/attributes.jl:234  [7] draw_atomic(scene::Makie.Scene, screen::CairoMakie.Screen{CairoMakie.IMAGE}, primitive::Union{MakieCore.Lines, MakieCore.LineSegments})  @ CairoMakie ~/.julia/packages/CairoMakie/ramgi/src/primitives.jl:6  [8] draw_plot(scene::Makie.Scene, screen::CairoMakie.Screen{CairoMakie.IMAGE}, primitive::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}})  @ CairoMakie ~/.julia/packages/CairoMakie/ramgi/src/infrastructure.jl:129  [9] cairo_draw(screen::CairoMakie.Screen{CairoMakie.IMAGE}, scene::Makie.Scene)  @ CairoMakie ~/.julia/packages/CairoMakie/ramgi/src/infrastructure.jl:51  [10] colorbuffer(screen::CairoMakie.Screen{CairoMakie.IMAGE})  @ CairoMakie ~/.julia/packages/CairoMakie/ramgi/src/screen.jl:345  [11] colorbuffer(screen::CairoMakie.Screen{CairoMakie.IMAGE}, format::Makie.ImageStorageFormat)  @ Makie ~/.julia/packages/Makie/8h0bl/src/display.jl:392  [12] colorbuffer(fig::Makie.FigureAxisPlot, format::Makie.ImageStorageFormat; update::Bool, backend::Module, screen_config::@Kwargs{})  @ Makie ~/.julia/packages/Makie/8h0bl/src/display.jl:476  [13] colorbuffer  @ ~/.julia/packages/Makie/8h0bl/src/display.jl:467 [inlined]  [14] colorbuffer(fig::Makie.FigureAxisPlot)  @ Makie ~/.julia/packages/Makie/8h0bl/src/display.jl:467  [15] top-level scope  @ ~/.julia/packages/Makie/8h0bl/precompile/shared-precompile.jl:6  [16] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:310  [17] top-level scope  @ ~/.julia/packages/CairoMakie/ramgi/src/precompiles.jl:11  [18] macro expansion  @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined]  [19] macro expansion  @ ~/.julia/packages/CairoMakie/ramgi/src/precompiles.jl:15 [inlined]  [20] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:310  [21] top-level scope  @ ~/.julia/packages/CairoMakie/ramgi/src/CairoMakie.jl:37  [22] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)  @ Base ./loading.jl:3002  [24] top-level scope  @ stdin:5  [25] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2848  [27] include_string  @ ./loading.jl:2858 [inlined]  [28] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:318  [29] _start()  @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/Makie/8h0bl/precompile/shared-precompile.jl:4 in expression starting at /home/pkgeval/.julia/packages/CairoMakie/ramgi/src/precompiles.jl:10 in expression starting at /home/pkgeval/.julia/packages/CairoMakie/ramgi/src/CairoMakie.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile CairoMakie [13f3f980-e62b-5c42-98c6-ff1f3baf88f0] to "/home/pkgeval/.julia/compiled/v1.13/CairoMakie/jl_QBk07m" (ProcessExited(1)). Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)  @ Base ./loading.jl:3289  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()  @ Base ./loading.jl:2654  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94  [5] #mkpidlock#7  @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined]  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115  [7] #invokelatest_gr#236  @ ./reflection.jl:1333 [inlined]  [8] invokelatest_gr  @ ./reflection.jl:1325 [inlined]  [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)  @ Base ./loading.jl:3860  [10] maybe_cachefile_lock  @ ./loading.jl:3857 [inlined]  [11] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2640  [12] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2468  [13] macro expansion  @ ./loading.jl:2396 [inlined]  [14] macro expansion  @ ./lock.jl:376 [inlined]  [15] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2360  [16] require  @ ./loading.jl:2336 [inlined]  [17] eval_import_path  @ ./module.jl:36 [inlined]  [18] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [19] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [20] top-level scope  @ ~/.julia/packages/GenomicDiversity/RMbwK/src/GenomicDiversity.jl:55  [21] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3002  [23] top-level scope  @ stdin:5  [24] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2848  [26] include_string  @ ./loading.jl:2858 [inlined]  [27] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:318  [28] _start()  @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/GenomicDiversity/RMbwK/src/GenomicDiversity.jl:24 in expression starting at stdin:5 ✗ GenomicDiversity 0 dependencies successfully precompiled in 201 seconds. 304 already precompiled. ERROR: LoadError: The following 2 direct dependencies failed to precompile: GenomicDiversity Failed to precompile GenomicDiversity [594eec9e-a086-4631-8fc7-61104af37930] to "/home/pkgeval/.julia/compiled/v1.13/GenomicDiversity/jl_xmlKli" (ProcessExited(1)). WARNING: importing deprecated binding Makie.ContinuousSurface into CairoMakie. , use VertexGrid instead. WARNING: importing deprecated binding Makie.DiscreteSurface into CairoMakie. , use CellGrid instead. ERROR: LoadError: FieldError: type Core.TypeName has no field `mt`, available fields: `name`, `module`, `singletonname`, `names`, `atomicfields`, `constfields`, `wrapper`, `Typeofwrapper`, `cache`, `linearcache`, `partial`, `hash`, `max_args`, `n_uninitialized`, `flags`, `cache_entry_count`, `max_methods`, `constprop_heuristic` Stacktrace: [1] getproperty(x::Core.TypeName, f::Symbol) @ Base ./Base_compiler.jl:57 [2] func2string(func::typeof(MakieCore.linesegments)) @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/recipes.jl:9 [3] plotkey(::Type{MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}}) @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/recipes.jl:21 [4] plotkey(::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}) @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/recipes.jl:22 [5] get_attribute(dict::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}, key::Symbol, default::Nothing) @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/attributes.jl:237 [6] get_attribute(dict::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}, key::Symbol) @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/attributes.jl:234 [7] draw_atomic(scene::Makie.Scene, screen::CairoMakie.Screen{CairoMakie.IMAGE}, primitive::Union{MakieCore.Lines, MakieCore.LineSegments}) @ CairoMakie ~/.julia/packages/CairoMakie/ramgi/src/primitives.jl:6 [8] draw_plot(scene::Makie.Scene, screen::CairoMakie.Screen{CairoMakie.IMAGE}, primitive::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}) @ CairoMakie ~/.julia/packages/CairoMakie/ramgi/src/infrastructure.jl:129 [9] cairo_draw(screen::CairoMakie.Screen{CairoMakie.IMAGE}, scene::Makie.Scene) @ CairoMakie ~/.julia/packages/CairoMakie/ramgi/src/infrastructure.jl:51 [10] colorbuffer(screen::CairoMakie.Screen{CairoMakie.IMAGE}) @ CairoMakie ~/.julia/packages/CairoMakie/ramgi/src/screen.jl:345 [11] colorbuffer(screen::CairoMakie.Screen{CairoMakie.IMAGE}, format::Makie.ImageStorageFormat) @ Makie ~/.julia/packages/Makie/8h0bl/src/display.jl:392 [12] colorbuffer(fig::Makie.FigureAxisPlot, format::Makie.ImageStorageFormat; update::Bool, backend::Module, screen_config::@Kwargs{}) @ Makie ~/.julia/packages/Makie/8h0bl/src/display.jl:476 [13] colorbuffer @ ~/.julia/packages/Makie/8h0bl/src/display.jl:467 [inlined] [14] colorbuffer(fig::Makie.FigureAxisPlot) @ Makie ~/.julia/packages/Makie/8h0bl/src/display.jl:467 [15] top-level scope @ ~/.julia/packages/Makie/8h0bl/precompile/shared-precompile.jl:6 [16] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [17] top-level scope @ ~/.julia/packages/CairoMakie/ramgi/src/precompiles.jl:11 [18] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [19] macro expansion @ ~/.julia/packages/CairoMakie/ramgi/src/precompiles.jl:15 [inlined] [20] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [21] top-level scope @ ~/.julia/packages/CairoMakie/ramgi/src/CairoMakie.jl:37 [22] include(mod::Module, _path::String) @ Base ./Base.jl:309 [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3002 [24] top-level scope @ stdin:5 [25] eval(m::Module, e::Any) @ Core ./boot.jl:489 [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [27] include_string @ ./loading.jl:2858 [inlined] [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [29] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/Makie/8h0bl/precompile/shared-precompile.jl:4 in expression starting at /home/pkgeval/.julia/packages/CairoMakie/ramgi/src/precompiles.jl:10 in expression starting at /home/pkgeval/.julia/packages/CairoMakie/ramgi/src/CairoMakie.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile CairoMakie [13f3f980-e62b-5c42-98c6-ff1f3baf88f0] to "/home/pkgeval/.julia/compiled/v1.13/CairoMakie/jl_QBk07m" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3289 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2654 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#236 @ ./reflection.jl:1333 [inlined] [8] invokelatest_gr @ ./reflection.jl:1325 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3860 [10] maybe_cachefile_lock @ ./loading.jl:3857 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2640 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2468 [13] macro expansion @ ./loading.jl:2396 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2360 [16] require @ ./loading.jl:2336 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [20] top-level scope @ ~/.julia/packages/GenomicDiversity/RMbwK/src/GenomicDiversity.jl:55 [21] include(mod::Module, _path::String) @ Base ./Base.jl:309 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3002 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [26] include_string @ ./loading.jl:2858 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [28] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/GenomicDiversity/RMbwK/src/GenomicDiversity.jl:24 in expression starting at stdin:5 CairoMakie Failed to precompile CairoMakie [13f3f980-e62b-5c42-98c6-ff1f3baf88f0] to "/home/pkgeval/.julia/compiled/v1.13/CairoMakie/jl_WCoDvT" (ProcessExited(1)). WARNING: importing deprecated binding Makie.ContinuousSurface into CairoMakie. , use VertexGrid instead. WARNING: importing deprecated binding Makie.DiscreteSurface into CairoMakie. , use CellGrid instead. ERROR: LoadError: FieldError: type Core.TypeName has no field `mt`, available fields: `name`, `module`, `singletonname`, `names`, `atomicfields`, `constfields`, `wrapper`, `Typeofwrapper`, `cache`, `linearcache`, `partial`, `hash`, `max_args`, `n_uninitialized`, `flags`, `cache_entry_count`, `max_methods`, `constprop_heuristic` Stacktrace: [1] getproperty(x::Core.TypeName, f::Symbol) @ Base ./Base_compiler.jl:57 [2] func2string(func::typeof(MakieCore.linesegments)) @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/recipes.jl:9 [3] plotkey(::Type{MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}}) @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/recipes.jl:21 [4] plotkey(::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}) @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/recipes.jl:22 [5] get_attribute(dict::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}, key::Symbol, default::Nothing) @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/attributes.jl:237 [6] get_attribute(dict::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}, key::Symbol) @ MakieCore ~/.julia/packages/MakieCore/hXATT/src/attributes.jl:234 [7] draw_atomic(scene::Makie.Scene, screen::CairoMakie.Screen{CairoMakie.IMAGE}, primitive::Union{MakieCore.Lines, MakieCore.LineSegments}) @ CairoMakie ~/.julia/packages/CairoMakie/ramgi/src/primitives.jl:6 [8] draw_plot(scene::Makie.Scene, screen::CairoMakie.Screen{CairoMakie.IMAGE}, primitive::MakieCore.LineSegments{Tuple{Vector{GeometryBasics.Point{2, Float32}}}}) @ CairoMakie ~/.julia/packages/CairoMakie/ramgi/src/infrastructure.jl:129 [9] cairo_draw(screen::CairoMakie.Screen{CairoMakie.IMAGE}, scene::Makie.Scene) @ CairoMakie ~/.julia/packages/CairoMakie/ramgi/src/infrastructure.jl:51 [10] colorbuffer(screen::CairoMakie.Screen{CairoMakie.IMAGE}) @ CairoMakie ~/.julia/packages/CairoMakie/ramgi/src/screen.jl:345 [11] colorbuffer(screen::CairoMakie.Screen{CairoMakie.IMAGE}, format::Makie.ImageStorageFormat) @ Makie ~/.julia/packages/Makie/8h0bl/src/display.jl:392 [12] colorbuffer(fig::Makie.FigureAxisPlot, format::Makie.ImageStorageFormat; update::Bool, backend::Module, screen_config::@Kwargs{}) @ Makie ~/.julia/packages/Makie/8h0bl/src/display.jl:476 [13] colorbuffer @ ~/.julia/packages/Makie/8h0bl/src/display.jl:467 [inlined] [14] colorbuffer(fig::Makie.FigureAxisPlot) @ Makie ~/.julia/packages/Makie/8h0bl/src/display.jl:467 [15] top-level scope @ ~/.julia/packages/Makie/8h0bl/precompile/shared-precompile.jl:6 [16] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [17] top-level scope @ ~/.julia/packages/CairoMakie/ramgi/src/precompiles.jl:11 [18] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [19] macro expansion @ ~/.julia/packages/CairoMakie/ramgi/src/precompiles.jl:15 [inlined] [20] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [21] top-level scope @ ~/.julia/packages/CairoMakie/ramgi/src/CairoMakie.jl:37 [22] include(mod::Module, _path::String) @ Base ./Base.jl:309 [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3002 [24] top-level scope @ stdin:5 [25] eval(m::Module, e::Any) @ Core ./boot.jl:489 [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2848 [27] include_string @ ./loading.jl:2858 [inlined] [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:318 [29] _start() @ Base ./client.jl:553 in expression starting at /home/pkgeval/.julia/packages/Makie/8h0bl/precompile/shared-precompile.jl:4 in expression starting at /home/pkgeval/.julia/packages/CairoMakie/ramgi/src/precompiles.jl:10 in expression starting at /home/pkgeval/.julia/packages/CairoMakie/ramgi/src/CairoMakie.jl:1 in expression starting at stdin:5 in expression starting at /home/pkgeval/.julia/packages/GenomicDiversity/RMbwK/test/runtests.jl:1 Testing failed after 211.0s ERROR: LoadError: Package GenomicDiversity errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2661 [3] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2510 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:537 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:168 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [7] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [10] include(mod::Module, _path::String) @ Base ./Base.jl:309 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:320 [12] _start() @ Base ./client.jl:553 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 1725.08s: package fails to precompile