Package evaluation of StructuralIdentifiability on Julia 1.13.0-DEV.843 (7634fdf1d6*) started at 2025-07-10T15:15:20.324 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.28s ################################################################################ # Installation # Installing StructuralIdentifiability... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [220ca800] + StructuralIdentifiability v0.5.15 Updating `~/.julia/environments/v1.13/Manifest.toml` ⌅ [c3fe647b] + AbstractAlgebra v0.44.13 [a9b6321e] + Atomix v1.1.1 [861a8166] + Combinatorics v1.0.3 [34da2185] + Compat v4.17.0 [864edb3b] + DataStructures v0.18.22 [e2ba6199] + ExprTools v0.1.10 [0b43b601] + Groebner v0.9.4 [18e54dd8] + IntegerMathUtils v0.1.3 [c8e1da08] + IterTools v1.10.0 [692b3bcd] + JLLWrappers v1.7.0 [1914dd2f] + MacroTools v0.5.16 ⌅ [2edaba10] + Nemo v0.49.5 [bac558e1] + OrderedCollections v1.8.1 [3e851597] + ParamPunPam v0.5.2 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [27ebfcd6] + Primes v0.5.7 [92933f4c] + ProgressMeter v1.10.4 [fb686558] + RandomExtensions v0.4.4 [220ca800] + StructuralIdentifiability v0.5.15 [a759f4b9] + TimerOutputs v0.5.29 [013be700] + UnsafeAtomics v0.3.0 ⌅ [e134572f] + FLINT_jll v300.200.201+0 [656ef2d0] + OpenBLAS32_jll v0.3.29+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [781609d7] + GMP_jll v6.3.0+2 [3a97d323] + MPFR_jll v4.2.2+0 [4536629a] + OpenBLAS_jll v0.3.29+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.13.1+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 4.84s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 185.79s ################################################################################ # Testing # Testing StructuralIdentifiability Status `/tmp/jl_uXvw12/Project.toml` ⌅ [c3fe647b] AbstractAlgebra v0.44.13 [4c88cf16] Aqua v0.8.13 [2a0fbf3d] CPUSummary v0.2.6 [861a8166] Combinatorics v1.0.3 [864edb3b] DataStructures v0.18.22 [0b43b601] Groebner v0.9.4 [c8e1da08] IterTools v1.10.0 [1914dd2f] MacroTools v0.5.16 ⌅ [2edaba10] Nemo v0.49.5 [3e851597] ParamPunPam v0.5.2 [aea7be01] PrecompileTools v1.3.2 [27ebfcd6] Primes v0.5.7 [276daf66] SpecialFunctions v2.5.1 [220ca800] StructuralIdentifiability v0.5.15 ⌅ [98d24dd4] TestSetExtensions v2.0.0 [a759f4b9] TimerOutputs v0.5.29 [ade2ca70] Dates v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [44cfe95a] Pkg v1.13.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_uXvw12/Manifest.toml` ⌅ [c3fe647b] AbstractAlgebra v0.44.13 [4c88cf16] Aqua v0.8.13 [a9b6321e] Atomix v1.1.1 [2a0fbf3d] CPUSummary v0.2.6 [861a8166] Combinatorics v1.0.3 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.17.0 [adafc99b] CpuId v0.3.1 [864edb3b] DataStructures v0.18.22 [ab62b9b5] DeepDiffs v1.2.0 [ffbed154] DocStringExtensions v0.9.5 [e2ba6199] ExprTools v0.1.10 [0b43b601] Groebner v0.9.4 [615f187c] IfElse v0.1.1 [18e54dd8] IntegerMathUtils v0.1.3 [92d709cd] IrrationalConstants v0.2.4 [c8e1da08] IterTools v1.10.0 [692b3bcd] JLLWrappers v1.7.0 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.16 ⌅ [2edaba10] Nemo v0.49.5 [bac558e1] OrderedCollections v1.8.1 [3e851597] ParamPunPam v0.5.2 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [27ebfcd6] Primes v0.5.7 [92933f4c] ProgressMeter v1.10.4 [fb686558] RandomExtensions v0.4.4 [276daf66] SpecialFunctions v2.5.1 [aedffcd0] Static v1.2.0 [220ca800] StructuralIdentifiability v0.5.15 ⌅ [98d24dd4] TestSetExtensions v2.0.0 [a759f4b9] TimerOutputs v0.5.29 [013be700] UnsafeAtomics v0.3.0 ⌅ [e134572f] FLINT_jll v300.200.201+0 [656ef2d0] OpenBLAS32_jll v0.3.29+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [781609d7] GMP_jll v6.3.0+2 [deac9b47] LibCURL_jll v8.14.1+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [3a97d323] MPFR_jll v4.2.2+0 [14a3606d] MozillaCACerts_jll v2025.5.20 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.1+0 [efcefdf7] PCRE2_jll v10.45.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... 9404.2 ms ✓ AbstractAlgebra → TestExt 1 dependency successfully precompiled in 10 seconds. 18 already precompiled. Resolving package versions... Installed ModelingToolkit ─ v10.10.0 Updating `/tmp/jl_uXvw12/Project.toml` [961ee093] + ModelingToolkit v10.10.0 Updating `/tmp/jl_uXvw12/Manifest.toml` [47edcb42] + ADTypes v1.15.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.19.0 [4c555306] + ArrayLayouts v1.11.1 [e2ed5e7c] + Bijections v0.2.2 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [8e7c35d0] + BlockArrays v1.6.3 [70df07ce] + BracketingNonlinearSolve v1.3.0 [d360d2e6] + ChainRulesCore v1.25.2 [fb6a15b2] + CloseOpenIntervals v0.1.13 [a80b9123] + CommonMark v0.9.1 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [b152e2b5] + CompositeTypes v0.1.4 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [e2d170a0] + DataValueInterfaces v1.0.0 [2b5f629d] + DiffEqBase v6.177.2 [459566f4] + DiffEqCallbacks v4.8.0 [77a26b50] + DiffEqNoiseProcess v5.24.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.2 [8d63f2c5] + DispatchDoctor v0.4.26 [31c24e10] + Distributions v0.25.120 [5b8099bc] + DomainSets v0.7.15 [7c1d4256] + DynamicPolynomials v0.6.2 [06fc5a27] + DynamicQuantities v1.8.0 [4e289a0a] + EnumX v1.0.5 [f151be2c] + EnzymeCore v0.8.12 [55351af7] + ExproniconLite v0.10.14 [7034ab61] + FastBroadcast v0.3.5 [9aa1b823] + FastClosures v0.3.2 [a4df4552] + FastPower v1.1.3 [1a297f60] + FillArrays v1.13.0 [64ca27bc] + FindFirstFunctions v1.4.1 [6a86dc24] + FiniteDiff v2.27.0 [1fa38f19] + Format v1.3.7 ⌅ [f6369f11] + ForwardDiff v0.10.38 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [d9f16b24] + Functors v0.5.2 [46192b85] + GPUArraysCore v0.2.0 [c27321d9] + Glob v1.3.1 [86223c79] + Graphs v1.13.0 [34004b35] + HypergeometricFunctions v0.3.28 [3263718b] + ImplicitDiscreteSolve v0.1.2 [d25df0c9] + Inflate v0.1.5 [8197267c] + IntervalSets v0.7.11 [3587e190] + InverseFunctions v0.1.17 [82899510] + IteratorInterfaceExtensions v1.0.0 [ae98c720] + Jieko v0.2.1 [98e50ef6] + JuliaFormatter v2.1.2 ⌅ [70703baa] + JuliaSyntax v0.4.10 [ccbc3e58] + JumpProcesses v9.16.1 [ba0b0d4f] + Krylov v0.10.1 [b964fa9f] + LaTeXStrings v1.4.0 [23fbe1c1] + Latexify v0.16.8 [10f19ff3] + LayoutPointers v0.1.17 [5078a376] + LazyArrays v2.6.1 [87fe0de2] + LineSearch v0.1.4 [d3d80556] + LineSearches v7.4.0 [7ed4a6bd] + LinearSolve v3.18.2 [d8e11817] + MLStyle v0.4.17 [d125e4d3] + ManualMemory v0.1.8 [bb5d69b7] + MaybeInplace v0.1.4 [e1d29d7a] + Missings v1.2.0 [961ee093] + ModelingToolkit v10.10.0 [2e0e35c7] + Moshi v0.3.7 [46d2c3a1] + MuladdMacro v0.2.4 [102ac46a] + MultivariatePolynomials v0.5.9 [d8a4904e] + MutableArithmetics v1.6.4 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [8913a72c] + NonlinearSolve v4.9.0 [be0214bd] + NonlinearSolveBase v1.12.0 [5959db7a] + NonlinearSolveFirstOrder v1.5.0 [9a2c21bd] + NonlinearSolveQuasiNewton v1.6.0 [26075421] + NonlinearSolveSpectralMethods v1.2.0 [6fe1bfb0] + OffsetArrays v1.17.0 [429524aa] + Optim v1.13.2 [bbf590c4] + OrdinaryDiffEqCore v1.26.2 [90014a1f] + PDMats v0.11.35 [d96e819e] + Parameters v0.12.3 [e409e4f3] + PoissonRandom v0.4.4 [f517fe37] + Polyester v0.7.18 [1d0040c9] + PolyesterWeave v0.2.2 [85a6dd25] + PositiveFactorizations v0.2.4 [08abe8d2] + PrettyTables v2.4.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [74087812] + Random123 v1.7.1 [e6cf234a] + RandomNumbers v1.6.0 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.34.1 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [ae5879a3] + ResettableStacks v1.1.1 [79098fc4] + Rmath v0.8.0 [7e49a35a] + RuntimeGeneratedFunctions v0.5.15 [9dfe8606] + SCCNonlinearSolve v1.3.1 [94e857df] + SIMDTypes v0.1.0 [0bca4576] + SciMLBase v2.102.1 [19f34311] + SciMLJacobianOperators v0.1.6 [c0aeaf25] + SciMLOperators v1.3.1 [431bcebd] + SciMLPublic v1.0.0 [53ae85a6] + SciMLStructures v1.7.0 [efcf1570] + Setfield v1.1.2 [727e6d20] + SimpleNonlinearSolve v2.5.0 [699a6c99] + SimpleTraits v0.9.4 [ce78b400] + SimpleUnPack v1.1.0 [a2af1166] + SortingAlgorithms v1.2.1 [0a514795] + SparseMatrixColorings v0.4.21 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.5 [4c63d2b9] + StatsFuns v1.5.0 [7792a7ef] + StrideArraysCore v0.5.7 [892a3eda] + StringManipulation v0.4.1 [2efcf032] + SymbolicIndexingInterface v0.3.41 [19f23fe9] + SymbolicLimits v0.2.2 [d1185830] + SymbolicUtils v3.29.0 [0c5d862f] + Symbolics v6.43.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [ed4db957] + TaskLocalValues v0.1.3 [8ea1fca8] + TermInterface v2.0.0 [1c621080] + TestItems v1.0.0 [8290d209] + ThreadingUtilities v0.5.5 [410a4b4d] + Tricks v0.1.10 [781d530d] + TruncatedStacktraces v1.4.0 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [1986cc42] + Unitful v1.23.1 [a7c27f48] + Unityper v0.1.6 [897b6980] + WeakValueDicts v0.1.0 [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0 [856f044c] + MKL_jll v2025.0.1+1 [f50d1b31] + Rmath_jll v0.5.1+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [9fa8497b] + Future v1.11.0 [4af54fe1] + LazyArtifacts v1.11.0 [a63ad114] + Mmap v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [4607b0f0] + SuiteSparse Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Resolving package versions... Updating `/tmp/jl_uXvw12/Project.toml` [0c5d862f] + Symbolics v6.43.0 No packages added to or removed from `/tmp/jl_uXvw12/Manifest.toml` Precompiling packages... 2247.5 ms ✓ MaybeInplace 4136.5 ms ✓ LazyArrays 1749.2 ms ✓ Accessors → UnitfulExt 3084.4 ms ✓ DispatchDoctor 1827.0 ms ✓ TruncatedStacktraces 3956.7 ms ✓ SciMLOperators 13664.6 ms ✓ CommonMark 11503.5 ms ✓ SparseMatrixColorings 5854.4 ms ✓ Static 5595.7 ms ✓ StatsBase 2151.6 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1651.0 ms ✓ ResettableStacks 5179.3 ms ✓ DomainSets 1693.7 ms ✓ Adapt → AdaptStaticArraysExt 1730.9 ms ✓ DifferentiationInterface → DifferentiationInterfaceStaticArraysExt 1701.5 ms ✓ FiniteDiff → FiniteDiffStaticArraysExt 1823.5 ms ✓ Accessors → StaticArraysExt 4711.5 ms ✓ SymbolicIndexingInterface 4133.1 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 9475.9 ms ✓ ForwardDiff 3867.8 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 1423.5 ms ✓ MaybeInplace → MaybeInplaceSparseArraysExt 3843.2 ms ✓ LazyArrays → LazyArraysStaticArraysExt 3026.5 ms ✓ LazyArrays → LazyArraysBlockArraysExt 1060.3 ms ✓ DispatchDoctor → DispatchDoctorEnzymeCoreExt 12662.1 ms ✓ DynamicQuantities 1662.9 ms ✓ DispatchDoctor → DispatchDoctorChainRulesCoreExt 1280.7 ms ✓ SciMLOperators → SciMLOperatorsStaticArraysCoreExt 1866.2 ms ✓ SciMLOperators → SciMLOperatorsSparseArraysExt 62125.5 ms ✓ JuliaFormatter 1939.0 ms ✓ DifferentiationInterface → DifferentiationInterfaceSparseMatrixColoringsExt 1098.5 ms ✓ BitTwiddlingConvenienceFunctions 10271.5 ms ✓ StaticArrayInterface 2848.7 ms ✓ CPUSummary 11683.6 ms ✓ Distributions 6460.5 ms ✓ RecursiveArrayTools 89465.3 ms ✓ SymbolicUtils 17886.2 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 2658.0 ms ✓ FastPower → FastPowerForwardDiffExt 1809.6 ms ✓ DifferentiationInterface → DifferentiationInterfaceForwardDiffExt 2938.2 ms ✓ Unitful → ForwardDiffExt 4388.7 ms ✓ DynamicQuantities → DynamicQuantitiesUnitfulExt 2007.6 ms ✓ DynamicQuantities → DynamicQuantitiesLinearAlgebraExt 1324.0 ms ✓ StaticArrayInterface → StaticArrayInterfaceOffsetArraysExt 1944.8 ms ✓ StaticArrayInterface → StaticArrayInterfaceStaticArraysExt 1354.5 ms ✓ CloseOpenIntervals 1965.8 ms ✓ LayoutPointers 2970.6 ms ✓ PolyesterWeave 5615.2 ms ✓ Distributions → DistributionsTestExt 5500.7 ms ✓ Distributions → DistributionsChainRulesCoreExt 4574.8 ms ✓ RecursiveArrayTools → RecursiveArrayToolsSparseArraysExt 14660.0 ms ✓ RecursiveArrayTools → RecursiveArrayToolsForwardDiffExt 28319.6 ms ✓ SciMLBase 94893.7 ms ✓ SymbolicLimits 7635.3 ms ✓ NLSolversBase 2348.1 ms ✓ StrideArraysCore 4856.2 ms ✓ SciMLBase → SciMLBaseChainRulesCoreExt 6142.8 ms ✓ SciMLBase → SciMLBaseMLStyleExt 9948.9 ms ✓ SciMLJacobianOperators 4864.4 ms ✓ SCCNonlinearSolve 6588.5 ms ✓ LineSearches 2760.8 ms ✓ Polyester 18345.2 ms ✓ LinearSolve 199981.1 ms ✓ Symbolics 22189.5 ms ✓ LineSearch 16396.7 ms ✓ NonlinearSolveBase 10698.3 ms ✓ Optim 3034.7 ms ✓ FastBroadcast 11042.2 ms ✓ LinearSolve → LinearSolveSparseArraysExt 6638.4 ms ✓ LinearSolve → LinearSolveEnzymeExt 9849.9 ms ✓ LinearSolve → LinearSolveForwardDiffExt 15453.1 ms ✓ Symbolics → SymbolicsForwardDiffExt 11812.6 ms ✓ DifferentiationInterface → DifferentiationInterfaceSymbolicsExt 4841.1 ms ✓ LineSearch → LineSearchLineSearchesExt 4994.8 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseMatrixColoringsExt 4868.0 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseArraysExt 24309.4 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLinearSolveExt 9903.2 ms ✓ BracketingNonlinearSolve 4469.7 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLineSearchExt 7294.3 ms ✓ NonlinearSolveBase → NonlinearSolveBaseForwardDiffExt 5369.2 ms ✓ RecursiveArrayTools → RecursiveArrayToolsFastBroadcastExt 17001.5 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveForwardDiffExt 9300.3 ms ✓ DiffEqBase 5477.4 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveChainRulesCoreExt 45477.9 ms ✓ SimpleNonlinearSolve 5875.3 ms ✓ DiffEqBase → DiffEqBaseChainRulesCoreExt 8508.1 ms ✓ DiffEqBase → DiffEqBaseForwardDiffExt 7071.3 ms ✓ DiffEqBase → DiffEqBaseUnitfulExt 19741.3 ms ✓ DiffEqBase → DiffEqBaseDistributionsExt 4051.8 ms ✓ DiffEqBase → DiffEqBaseSparseArraysExt 14676.4 ms ✓ DiffEqCallbacks 12220.9 ms ✓ OrdinaryDiffEqCore 5328.2 ms ✓ NonlinearSolveBase → NonlinearSolveBaseDiffEqBaseExt 6130.4 ms ✓ SimpleNonlinearSolve → SimpleNonlinearSolveChainRulesCoreExt 6716.0 ms ✓ SimpleNonlinearSolve → SimpleNonlinearSolveDiffEqBaseExt 154287.0 ms ✓ DiffEqNoiseProcess 24265.6 ms ✓ JumpProcesses 5805.6 ms ✓ OrdinaryDiffEqCore → OrdinaryDiffEqCoreEnzymeCoreExt 72140.5 ms ✓ NonlinearSolveSpectralMethods 139155.8 ms ✓ NonlinearSolveFirstOrder 30700.1 ms ✓ NonlinearSolveQuasiNewton 83611.8 ms ✓ ImplicitDiscreteSolve 6435.7 ms ✓ NonlinearSolveSpectralMethods → NonlinearSolveSpectralMethodsForwardDiffExt 9731.8 ms ✓ NonlinearSolveQuasiNewton → NonlinearSolveQuasiNewtonForwardDiffExt 55879.5 ms ✓ NonlinearSolve Info Given ModelingToolkit was explicitly requested, output will be shown live  WARNING: llvmcall with integer pointers is deprecated. Use actual pointers instead, replacing i32 or i64 with i8* or ptr in var"#bareiss_update_virtual_colswap_mtk!#1377"(Any, typeof(ModelingToolkit.bareiss_update_virtual_colswap_mtk!), Any, ModelingToolkit.SparseMatrixCLIL{T, Ti} where Ti<:Integer where T, Any, Any, Any, Any) at /home/pkgeval/.julia/packages/ModelingToolkit/vyvd9/src/systems/sparsematrixclil.jl 511101.9 ms ✓ ModelingToolkit 106 dependencies successfully precompiled in 2200 seconds. 202 already precompiled. 1 dependency had output during precompilation: ┌ ModelingToolkit │ [Output was shown above] └ Precompiling packages... 11339.8 ms ✓ Groebner → GroebnerDynamicPolynomialsExt 1 dependency successfully precompiled in 12 seconds. 44 already precompiled. Precompiling packages... 101894.2 ms ✓ Symbolics → SymbolicsNemoExt Info Given SymbolicsGroebnerExt was explicitly requested, output will be shown live   ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ======================================================================================  cmd: /opt/julia/bin/julia 875 running 1 of 1  signal (10): User defined signal 1 _ZN12_GLOBAL__N_18Verifier16visitInstructionERN4llvm11InstructionE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN12_GLOBAL__N_18Verifier6verifyERKN4llvm8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm14verifyFunctionERKNS_8FunctionEPNS_11raw_ostreamE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) verifyLLVMIR at /source/src/pipeline.cpp:888 run at /source/src/llvm-late-gc-lowering.cpp:2641 run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm11PassManagerINS_8FunctionENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm27ModuleToFunctionPassAdaptor3runERNS_6ModuleERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm11PassManagerINS_6ModuleENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/src/pipeline.cpp:791 operator() at /source/src/jitlayers.cpp:1518 withModuleDo<(anonymous namespace)::sizedOptimizerT::operator()(llvm::orc::ThreadSafeModule) [with long unsigned int N = 4]:: > at /source/usr/include/llvm/ExecutionEngine/Orc/ThreadSafeModule.h:136 [inlined] operator() at /source/src/jitlayers.cpp:1479 [inlined] operator() at /source/src/jitlayers.cpp:1631 [inlined] addModule at /source/src/jitlayers.cpp:2088 jl_compile_codeinst_now at /source/src/jitlayers.cpp:683 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:883 jl_compile_method_internal at /source/src/gf.c:3305 _jl_invoke at /source/src/gf.c:3785 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] jl_f__apply_iterate at /source/src/builtins.c:864 #hook!##0 at /home/pkgeval/.julia/packages/DocStringExtensions/zNis6/src/templates.jl:11 _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] jl_f__apply_iterate at /source/src/builtins.c:864 @doc at ./boot.jl:766 _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_invoke at /source/src/gf.c:3800 jl_invoke_julia_macro at /source/src/ast.c:1137 jl_expand_macros at /source/src/ast.c:1199 jl_fl_lower at /source/src/ast.c:1286 fl_lower at ./flfrontend.jl:24 jfptr_fl_lower_63599.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] ijl_lower at /source/src/ast.c:1350 jl_eval_module_expr at /source/src/toplevel.c:194 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:658 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 _include at ./loading.jl:2908 include at ./Base.jl:309 include_package_for_output at ./loading.jl:3002 jfptr_include_package_for_output_53441.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 include_string at ./loading.jl:2858 [inlined] exec_options at ./client.jl:318 _start at ./client.jl:553 jfptr__start_54050.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7cd20a8a3249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file)  ============================================================== Profile collected. A report will print at the next yield point ==============================================================  19528.8 ms ✓ Symbolics → SymbolicsGroebnerExt 2 dependencies successfully precompiled in 123 seconds. 163 already precompiled. 2 dependencies had output during precompilation: ┌ Symbolics → SymbolicsNemoExt │ [ Info: Assuming ((5//8)*(a^2)) != 0 │ [ Info: Assuming ((5//8)*(a^2)) != 0 └ ┌ Symbolics → SymbolicsGroebnerExt │ [Output was shown above] └ ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 35 running 1 of 1 signal (10): User defined signal 1 jl_specializations_get_linfo_ at /source/src/gf.c:237 jl_restore_system_image_from_stream_ at /source/src/staticdata.c:4170 jl_restore_package_image_from_stream at /source/src/staticdata.c:4422 ijl_restore_incremental at /source/src/staticdata.c:4504 #_include_from_serialized#876 at ./loading.jl:1275 _include_from_serialized at ./loading.jl:1247 [inlined] #_require_search_from_serialized#892 at ./loading.jl:2089 _require_search_from_serialized at ./loading.jl:1983 jfptr__require_search_from_serialized_60649.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 __require_prelocked at ./loading.jl:2602 _require_prelocked at ./loading.jl:2468 _require_prelocked at ./loading.jl:2462 [inlined] run_extension_callbacks at ./loading.jl:1581 run_extension_callbacks at ./loading.jl:1618 run_package_callbacks at ./loading.jl:1434 #_require_search_from_serialized#892 at ./loading.jl:2108 _require_search_from_serialized at ./loading.jl:1983 jfptr__require_search_from_serialized_60649.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 __require_prelocked at ./loading.jl:2602 _require_prelocked at ./loading.jl:2468 macro expansion at ./loading.jl:2396 [inlined] macro expansion at ./lock.jl:376 [inlined] __require at ./loading.jl:2360 jfptr___require_56031.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] jl_f_invoke_in_world at /source/src/builtins.c:896 require at ./loading.jl:2336 [inlined] eval_import_path at ./module.jl:36 [inlined] eval_import_path_all at ./module.jl:60 _eval_using at ./module.jl:137 jfptr__eval_using_63901.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2848 _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 _include at ./loading.jl:2908 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_41454.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 exec_options at ./client.jl:286 _start at ./client.jl:553 jfptr__start_54050.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x78d4e63c7249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000078d4cc400010 Total snapshots: 870. Utilization: 100% ╎870 @Base/client.jl:553 _start() ╎ 870 @Base/client.jl:286 exec_options(opts::Base.JLOptions) ╎ 870 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ 870 @Base/Base.jl:311 (::Base.IncludeInto)(fname::String) ╎ 870 @Base/Base.jl:310 include(mapexpr::Function, mod::Module, _path::S… ╎ 870 @Base/loading.jl:2908 _include(mapexpr::Function, mod::Module, _p… ╎ ╎ 870 @Base/loading.jl:2848 include_string(mapexpr::typeof(identity), … ╎ ╎ 870 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ 870 @Base/module.jl:137 _eval_using(to::Module, path::Expr) ╎ ╎ 870 @Base/module.jl:60 eval_import_path_all(at::Module, path::Exp… ╎ ╎ 870 @Base/module.jl:36 eval_import_path ╎ ╎ ╎ 870 @Base/loading.jl:2336 require ╎ ╎ ╎ 870 @Base/loading.jl:2360 __require(into::Module, mod::Symbol) ╎ ╎ ╎ 870 @Base/lock.jl:376 macro expansion ╎ ╎ ╎ 870 @Base/loading.jl:2396 macro expansion ╎ ╎ ╎ 870 @Base/loading.jl:2468 _require_prelocked(uuidkey::Base.… ╎ ╎ ╎ ╎ 870 @Base/loading.jl:2602 __require_prelocked(pkg::Base.Pk… ╎ ╎ ╎ ╎ 870 @Base/loading.jl:1983 kwcall(::@NamedTuple{reasons::D… ╎ ╎ ╎ ╎ 870 @Base/loading.jl:2108 _require_search_from_serialize… ╎ ╎ ╎ ╎ 870 @Base/…ading.jl:1434 run_package_callbacks(modkey::… ╎ ╎ ╎ ╎ 870 @Base/…ading.jl:1618 run_extension_callbacks(pkgid… ╎ ╎ ╎ ╎ ╎ 870 @Base/…ding.jl:1581 run_extension_callbacks(extid… ╎ ╎ ╎ ╎ ╎ 870 @Base/…ding.jl:2462 _require_prelocked ╎ ╎ ╎ ╎ ╎ 870 @Base/…ding.jl:2468 _require_prelocked(uuidkey:… ╎ ╎ ╎ ╎ ╎ 870 @Base/…ing.jl:2602 __require_prelocked(pkg::Ba… ╎ ╎ ╎ ╎ ╎ 870 @Base/…ing.jl:1983 kwcall(::@NamedTuple{reaso… ╎ ╎ ╎ ╎ ╎ ╎ 870 @Base/…ng.jl:2089 _require_search_from_seria… ╎ ╎ ╎ ╎ ╎ ╎ 870 @Base/…ng.jl:1247 _include_from_serialized 869╎ ╎ ╎ ╎ ╎ ╎ 870 @Base/…ng.jl:1275 _include_from_serialized… Precompiling packages... 42932.1 ms ✓ ModelingToolkit → MTKDeepDiffsExt 1 dependency successfully precompiled in 59 seconds. 309 already precompiled. Precompiling packages... ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1213 wait_forever at ./task.jl:1150 jfptr_wait_forever_54619.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000077f9dd33ad10 Total snapshots: 537. Utilization: 0% ╎537 @Base/task.jl:1150 wait_forever() 536╎ 537 @Base/task.jl:1213 wait() [35] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/StructuralIdentifiability/Tp10P/test/runtests.jl:78 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1213 wait_forever at ./task.jl:1150 jfptr_wait_forever_54619.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 61081618 (Pool: 61079176; Big: 2442); GC: 51 [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1213 wait_forever at ./task.jl:1150 jfptr_wait_forever_54619.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 21155433 (Pool: 21154862; Big: 571); GC: 19 Info PkgEval terminated after 2809.3s: test duration exceeded the time limit