Package evaluation of SIRUS on Julia 1.13.0-DEV.843 (7634fdf1d6*) started at 2025-07-11T00:24:18.088 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 6.44s ################################################################################ # Installation # Installing SIRUS... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [cdeec39e] + SIRUS v2.0.1 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.15.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [4fba245c] + ArrayInterface v7.19.0 [a9b6321e] + Atomix v1.1.1 [198e06fe] + BangBang v0.4.4 [9718e550] + Baselet v0.1.1 [324d7699] + CategoricalArrays v0.10.8 [af321ab8] + CategoricalDistributions v0.1.15 [d360d2e6] + ChainRulesCore v1.25.2 [3da002f7] + ColorTypes v0.12.1 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.17.0 [a33af91c] + CompositionsBase v0.1.2 [ed09eef8] + ComputationalResources v0.3.2 [187b0558] + ConstructionBase v1.6.0 [6add18c4] + ContextVariablesX v0.1.3 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [8bb1440f] + DelimitedFiles v1.9.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.2 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [cc61a311] + FLoops v0.2.2 [b9860ae5] + FLoopsBase v0.1.1 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [53c48c17] + FixedPointNumbers v0.8.5 [f6369f11] + ForwardDiff v1.0.1 [46192b85] + GPUArraysCore v0.2.0 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [22cec73e] + InitialValues v0.3.1 [842dd82b] + InlineStrings v1.4.4 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [42fd0dbc] + IterativeSolvers v0.9.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [b14d175d] + JuliaVariables v0.2.4 [63c18a36] + KernelAbstractions v0.9.36 [b964fa9f] + LaTeXStrings v1.4.0 [92ad9a40] + LearnAPI v1.0.1 [d3d80556] + LineSearches v7.4.0 [7a12625a] + LinearMaps v3.11.4 [2ab3a3ac] + LogExpFunctions v0.3.29 [c2834f40] + MLCore v1.0.0 [a7f614a8] + MLJBase v1.8.1 [6ee0df7b] + MLJLinearModels v0.10.1 [e80e1ace] + MLJModelInterface v1.11.1 [d8e11817] + MLStyle v0.4.17 [f1d291b0] + MLUtils v0.4.8 [1914dd2f] + MacroTools v0.5.16 [128add7d] + MicroCollections v0.2.0 [e1d29d7a] + Missings v1.2.0 [d41bc354] + NLSolversBase v7.10.0 [872c559c] + NNlib v0.9.30 [77ba4419] + NaNMath v1.1.3 [71a1bf82] + NameResolution v0.1.5 [429524aa] + Optim v1.13.2 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [d96e819e] + Parameters v0.12.3 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [8162dcfd] + PrettyPrint v0.2.0 [08abe8d2] + PrettyTables v2.4.0 [92933f4c] + ProgressMeter v1.10.4 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [cdeec39e] + SIRUS v2.0.1 [321657f4] + ScientificTypes v3.1.0 [30f210dd] + ScientificTypesBase v3.0.0 [7e506255] + ScopedValues v1.3.0 [efcf1570] + Setfield v1.1.2 [605ecd9f] + ShowCases v0.1.0 [699a6c99] + SimpleTraits v0.9.4 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.1 [171d559e] + SplittablesBase v0.1.15 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [c062fc1d] + StatisticalMeasuresBase v0.1.2 [64bff920] + StatisticalTraits v3.4.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.5 [4c63d2b9] + StatsFuns v1.5.0 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [28d57a85] + Transducers v0.4.84 [3a884ed6] + UnPack v1.0.2 [013be700] + UnsafeAtomics v0.3.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.13.1+0 Installation completed after 3.41s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/iS95e/src/julia-1.11/activate_set.jl:75 Precompiling package dependencies... Precompilation completed after 249.98s ################################################################################ # Testing # Testing SIRUS Test Could not use exact versions of packages in manifest. Re-resolving dependencies Updating `/tmp/jl_WrtsJO/Project.toml` [336ed68f] + CSV v0.10.15 [124859b0] + DataDeps v0.7.13 [a93c6f00] + DataFrames v1.7.0 [7806a523] + DecisionTree v0.12.4 [e30172f5] + Documenter v1.14.1 [eb30cadb] + MLDatasets v0.7.18 ⌃ [a7f614a8] ↓ MLJBase v1.8.1 ⇒ v1.7.0 [c6f25543] + MLJDecisionTreeInterface v0.4.2 ⌅ [6ee0df7b] ↓ MLJLinearModels v0.10.1 ⇒ v0.9.2 [72560011] + MLJTestInterface v0.2.8 [54119dfa] + MLJXGBoostInterface v0.3.12 ⌅ [6f49c342] + RCall v0.13.18 [cdeec39e] + SIRUS v2.0.1 [860ef19b] + StableRNGs v1.0.3 ⌅ [a19d573c] + StatisticalMeasures v0.1.7 Updating `/tmp/jl_WrtsJO/Manifest.toml` Precompiling packages... 2056.0 ms ✓ CUDA_Driver_jll 1 dependency successfully precompiled in 2 seconds. 28 already precompiled. Precompiling packages... 4610.4 ms ✓ CUDA_Runtime_jll 1 dependency successfully precompiled in 5 seconds. 30 already precompiled. [a4c015fc] + ANSIColoredPrinters v0.0.1 [1520ce14] + AbstractTrees v0.4.5 [a963bdd2] + AtomsBase v0.5.1 [ab4f0b2a] + BFloat16s v0.5.1 [d1d4a3ce] + BitFlags v0.1.9 [e1450e63] + BufferedStreams v1.2.2 [fa961155] + CEnum v0.5.0 [336ed68f] + CSV v0.10.15 [46823bd8] + Chemfiles v0.10.42 [944b1d66] + CodecZlib v0.7.8 [35d6a980] + ColorSchemes v3.30.0 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [f0e56b4a] + ConcurrentUtilities v2.5.0 [8f4d0f93] + Conda v1.10.2 [124859b0] + DataDeps v0.7.13 [a93c6f00] + DataFrames v1.7.0 [7806a523] + DecisionTree v0.12.4 [e30172f5] + Documenter v1.14.1 [460bff9d] + ExceptionUnwrapping v0.1.11 [5789e2e9] + FileIO v1.17.0 [48062228] + FilePathsBase v0.9.24 [92fee26a] + GZip v0.6.2 [d7ba0133] + Git v1.4.0 [c27321d9] + Glob v1.3.1 [f67ccb44] + HDF5 v0.17.2 [cd3eb016] + HTTP v1.10.17 [b5f81e59] + IOCapture v0.2.5 [c817782e] + ImageBase v0.1.7 [a09fc81d] + ImageCore v0.10.5 [4e3cecfd] + ImageShow v0.3.8 [842dd82b] + InlineStrings v1.4.4 [7d512f48] + InternedStrings v0.7.0 [033835bb] + JLD2 v0.5.15 [682c06a0] + JSON v0.21.4 [0f8b85d8] + JSON3 v1.14.3 [0e77f7df] + LazilyInitializedFields v1.3.0 [8cdb02fc] + LazyModules v0.3.1 ⌅ [92ad9a40] ↓ LearnAPI v1.0.1 ⇒ v0.1.0 [e6f89c97] + LoggingExtras v1.1.0 [23992714] + MAT v0.10.7 [eb30cadb] + MLDatasets v0.7.18 ⌃ [a7f614a8] ↓ MLJBase v1.8.1 ⇒ v1.7.0 [c6f25543] + MLJDecisionTreeInterface v0.4.2 ⌅ [6ee0df7b] ↓ MLJLinearModels v0.10.1 ⇒ v0.9.2 [72560011] + MLJTestInterface v0.2.8 [54119dfa] + MLJXGBoostInterface v0.3.12 [3da0fdf6] + MPIPreferences v0.1.11 [dbb5928d] + MappedArrays v0.4.2 [d0879d2d] + MarkdownAST v0.1.2 [739be429] + MbedTLS v1.1.9 [e94cdb99] + MosaicViews v0.3.4 [15e1cf62] + NPZ v0.4.3 [6fe1bfb0] + OffsetArrays v1.17.0 [4d8831e6] + OpenSSL v1.5.0 [65ce6f38] + PackageExtensionCompat v1.0.2 [5432bcbf] + PaddedViews v0.5.12 [69de0a69] + Parsers v2.8.3 [7b2266bf] + PeriodicTable v1.2.1 [fbb45041] + Pickle v0.3.6 [2dfb63ee] + PooledArrays v1.4.3 ⌅ [6f49c342] + RCall v0.13.18 [2792f1a3] + RegistryInstances v0.1.0 [cdeec39e] + SIRUS v2.0.1 [6e75b9c4] + ScikitLearnBase v0.5.0 [6c6a2e73] + Scratch v1.3.0 [91c51154] + SentinelArrays v1.4.8 [1277b4bf] + ShiftedArrays v2.0.0 [777ac1f9] + SimpleBufferStream v1.2.0 [a0a7dd2c] + SparseMatricesCSR v0.6.9 [860ef19b] + StableRNGs v1.0.3 [cae243ae] + StackViews v0.1.2 ⌅ [a19d573c] + StatisticalMeasures v0.1.7 [3eaba693] + StatsModels v0.7.4 [4db3bf67] + StridedViews v0.4.1 [69024149] + StringEncodings v0.3.7 [856f2bd8] + StructTypes v1.11.0 [62fd8b95] + TensorCore v0.1.1 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.6.1 [1986cc42] + Unitful v1.23.1 [a7773ee8] + UnitfulAtomic v1.0.0 [81def892] + VersionParsing v1.3.0 [ea10d353] + WeakRefStrings v1.4.2 [1b915085] + WinReg v1.0.0 [76eceee3] + WorkerUtilities v1.6.1 [009559a3] + XGBoost v2.5.1 [a5390f91] + ZipFile v0.10.1 [4ee394cb] + CUDA_Driver_jll v12.9.0+0 [76a88914] + CUDA_Runtime_jll v0.18.0+0 [78a364fa] + Chemfiles_jll v0.10.4+0 [2e619515] + Expat_jll v2.6.5+0 [f8c6e375] + Git_jll v2.50.0+0 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.1+0 [1d63c593] + LLVMOpenMP_jll v18.1.8+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [7cb0a576] + MPICH_jll v4.3.1+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [c8ffd9c3] + MbedTLS_jll v2.28.6+2 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.8+0 [9bd350c2] + OpenSSH_jll v10.0.1+0 [a5c6f535] + XGBoost_jll v2.0.1+0 [477f73a3] + libaec_jll v1.1.3+0 [0dad84c5] + ArgTools v1.1.2 [f43a241f] + Downloads v1.7.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [a4e569a6] + Tar v1.10.0 [deac9b47] + LibCURL_jll v8.14.1+1 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.5.20 [458c3c95] + OpenSSL_jll v3.5.1+0 [efcefdf7] + PCRE2_jll v10.45.0+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_WrtsJO/Project.toml` [336ed68f] CSV v0.10.15 [324d7699] CategoricalArrays v0.10.8 [124859b0] DataDeps v0.7.13 [a93c6f00] DataFrames v1.7.0 [7806a523] DecisionTree v0.12.4 [e30172f5] Documenter v1.14.1 [eb30cadb] MLDatasets v0.7.18 ⌃ [a7f614a8] MLJBase v1.7.0 [c6f25543] MLJDecisionTreeInterface v0.4.2 ⌅ [6ee0df7b] MLJLinearModels v0.9.2 [e80e1ace] MLJModelInterface v1.11.1 [72560011] MLJTestInterface v0.2.8 [54119dfa] MLJXGBoostInterface v0.3.12 ⌅ [6f49c342] RCall v0.13.18 [cdeec39e] SIRUS v2.0.1 [860ef19b] StableRNGs v1.0.3 ⌅ [a19d573c] StatisticalMeasures v0.1.7 [10745b16] Statistics v1.11.1 [bd369af6] Tables v1.12.1 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_WrtsJO/Manifest.toml` [47edcb42] ADTypes v1.15.0 [a4c015fc] ANSIColoredPrinters v0.0.1 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 [4fba245c] ArrayInterface v7.19.0 [a9b6321e] Atomix v1.1.1 [a963bdd2] AtomsBase v0.5.1 [ab4f0b2a] BFloat16s v0.5.1 [198e06fe] BangBang v0.4.4 [9718e550] Baselet v0.1.1 [d1d4a3ce] BitFlags v0.1.9 [e1450e63] BufferedStreams v1.2.2 [fa961155] CEnum v0.5.0 [336ed68f] CSV v0.10.15 [324d7699] CategoricalArrays v0.10.8 [af321ab8] CategoricalDistributions v0.1.15 [d360d2e6] ChainRulesCore v1.25.2 [46823bd8] Chemfiles v0.10.42 [944b1d66] CodecZlib v0.7.8 [35d6a980] ColorSchemes v3.30.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.17.0 [a33af91c] CompositionsBase v0.1.2 [ed09eef8] ComputationalResources v0.3.2 [f0e56b4a] ConcurrentUtilities v2.5.0 [8f4d0f93] Conda v1.10.2 [187b0558] ConstructionBase v1.6.0 [6add18c4] ContextVariablesX v0.1.3 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [124859b0] DataDeps v0.7.13 [a93c6f00] DataFrames v1.7.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [7806a523] DecisionTree v0.12.4 [244e2a9f] DefineSingletons v0.1.2 [8bb1440f] DelimitedFiles v1.9.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.2 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.5 [e30172f5] Documenter v1.14.1 [4e289a0a] EnumX v1.0.5 [460bff9d] ExceptionUnwrapping v0.1.11 [cc61a311] FLoops v0.2.2 [b9860ae5] FLoopsBase v0.1.1 [5789e2e9] FileIO v1.17.0 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.13.0 [6a86dc24] FiniteDiff v2.27.0 [53c48c17] FixedPointNumbers v0.8.5 [f6369f11] ForwardDiff v1.0.1 [46192b85] GPUArraysCore v0.2.0 [92fee26a] GZip v0.6.2 [d7ba0133] Git v1.4.0 [c27321d9] Glob v1.3.1 [f67ccb44] HDF5 v0.17.2 [cd3eb016] HTTP v1.10.17 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [b5f81e59] IOCapture v0.2.5 [c817782e] ImageBase v0.1.7 [a09fc81d] ImageCore v0.10.5 [4e3cecfd] ImageShow v0.3.8 [22cec73e] InitialValues v0.3.1 [842dd82b] InlineStrings v1.4.4 [7d512f48] InternedStrings v0.7.0 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.4 [42fd0dbc] IterativeSolvers v0.9.4 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.5.15 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [0f8b85d8] JSON3 v1.14.3 [b14d175d] JuliaVariables v0.2.4 [63c18a36] KernelAbstractions v0.9.36 [b964fa9f] LaTeXStrings v1.4.0 [0e77f7df] LazilyInitializedFields v1.3.0 [8cdb02fc] LazyModules v0.3.1 ⌅ [92ad9a40] LearnAPI v0.1.0 [d3d80556] LineSearches v7.4.0 [7a12625a] LinearMaps v3.11.4 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.1.0 [23992714] MAT v0.10.7 [c2834f40] MLCore v1.0.0 [eb30cadb] MLDatasets v0.7.18 ⌃ [a7f614a8] MLJBase v1.7.0 [c6f25543] MLJDecisionTreeInterface v0.4.2 ⌅ [6ee0df7b] MLJLinearModels v0.9.2 [e80e1ace] MLJModelInterface v1.11.1 [72560011] MLJTestInterface v0.2.8 [54119dfa] MLJXGBoostInterface v0.3.12 [d8e11817] MLStyle v0.4.17 [f1d291b0] MLUtils v0.4.8 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.16 [dbb5928d] MappedArrays v0.4.2 [d0879d2d] MarkdownAST v0.1.2 [739be429] MbedTLS v1.1.9 [128add7d] MicroCollections v0.2.0 [e1d29d7a] Missings v1.2.0 [e94cdb99] MosaicViews v0.3.4 [d41bc354] NLSolversBase v7.10.0 [872c559c] NNlib v0.9.30 [15e1cf62] NPZ v0.4.3 [77ba4419] NaNMath v1.1.3 [71a1bf82] NameResolution v0.1.5 [6fe1bfb0] OffsetArrays v1.17.0 [4d8831e6] OpenSSL v1.5.0 [429524aa] Optim v1.13.2 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.35 [65ce6f38] PackageExtensionCompat v1.0.2 [5432bcbf] PaddedViews v0.5.12 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [7b2266bf] PeriodicTable v1.2.1 [fbb45041] Pickle v0.3.6 [2dfb63ee] PooledArrays v1.4.3 [85a6dd25] PositiveFactorizations v0.2.4 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [8162dcfd] PrettyPrint v0.2.0 [08abe8d2] PrettyTables v2.4.0 [92933f4c] ProgressMeter v1.10.4 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 ⌅ [6f49c342] RCall v0.13.18 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [2792f1a3] RegistryInstances v0.1.0 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.8.0 [cdeec39e] SIRUS v2.0.1 [321657f4] ScientificTypes v3.1.0 [30f210dd] ScientificTypesBase v3.0.0 [6e75b9c4] ScikitLearnBase v0.5.0 [7e506255] ScopedValues v1.3.0 [6c6a2e73] Scratch v1.3.0 [91c51154] SentinelArrays v1.4.8 [efcf1570] Setfield v1.1.2 [1277b4bf] ShiftedArrays v2.0.0 [605ecd9f] ShowCases v0.1.0 [777ac1f9] SimpleBufferStream v1.2.0 [699a6c99] SimpleTraits v0.9.4 [a2af1166] SortingAlgorithms v1.2.1 [a0a7dd2c] SparseMatricesCSR v0.6.9 [276daf66] SpecialFunctions v2.5.1 [171d559e] SplittablesBase v0.1.15 [860ef19b] StableRNGs v1.0.3 [cae243ae] StackViews v0.1.2 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 ⌅ [a19d573c] StatisticalMeasures v0.1.7 [c062fc1d] StatisticalMeasuresBase v0.1.2 [64bff920] StatisticalTraits v3.4.0 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.5 [4c63d2b9] StatsFuns v1.5.0 [3eaba693] StatsModels v0.7.4 [4db3bf67] StridedViews v0.4.1 [69024149] StringEncodings v0.3.7 [892a3eda] StringManipulation v0.4.1 [856f2bd8] StructTypes v1.11.0 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [62fd8b95] TensorCore v0.1.1 [3bb67fe8] TranscodingStreams v0.11.3 [28d57a85] Transducers v0.4.84 [5c2747f8] URIs v1.6.1 [3a884ed6] UnPack v1.0.2 [1986cc42] Unitful v1.23.1 [a7773ee8] UnitfulAtomic v1.0.0 [013be700] UnsafeAtomics v0.3.0 [81def892] VersionParsing v1.3.0 [ea10d353] WeakRefStrings v1.4.2 [1b915085] WinReg v1.0.0 [76eceee3] WorkerUtilities v1.6.1 [009559a3] XGBoost v2.5.1 [a5390f91] ZipFile v0.10.1 [4ee394cb] CUDA_Driver_jll v12.9.0+0 [76a88914] CUDA_Runtime_jll v0.18.0+0 [78a364fa] Chemfiles_jll v0.10.4+0 [2e619515] Expat_jll v2.6.5+0 [f8c6e375] Git_jll v2.50.0+0 [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.1+0 [1d63c593] LLVMOpenMP_jll v18.1.8+0 [94ce4f54] Libiconv_jll v1.18.0+0 [7cb0a576] MPICH_jll v4.3.1+0 [f1f71cc9] MPItrampoline_jll v5.5.4+0 [c8ffd9c3] MbedTLS_jll v2.28.6+2 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.8+0 [9bd350c2] OpenSSH_jll v10.0.1+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [a5c6f535] XGBoost_jll v2.0.1+0 [477f73a3] libaec_jll v1.1.3+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.14.1+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.5.20 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.1+0 [efcefdf7] PCRE2_jll v10.45.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling packages... 10014.8 ms ✓ Transducers → TransducersDataFramesExt 7319.3 ms ✓ BangBang → BangBangDataFramesExt 5182.3 ms ✓ Chemfiles 5524.5 ms ✓ Pickle 7325.2 ms ✓ ImageShow 21460.5 ms ✓ MLUtils 25565.1 ms ✓ MLDatasets 7 dependencies successfully precompiled in 86 seconds. 200 already precompiled. Precompiling packages... 72813.5 ms ✓ DataFrames 1 dependency successfully precompiled in 74 seconds. 34 already precompiled. Precompiling packages... 7464.1 ms ✓ BangBang → BangBangDataFramesExt 1 dependency successfully precompiled in 8 seconds. 47 already precompiled. Precompiling packages... 7276.1 ms ✓ Transducers → TransducersDataFramesExt 1 dependency successfully precompiled in 9 seconds. 63 already precompiled. Precompiling packages... 2691.7 ms ✓ NNlib → NNlibSpecialFunctionsExt 8355.8 ms ✓ Distributions 17412.0 ms ✓ StatisticalMeasuresBase 4950.8 ms ✓ Distributions → DistributionsTestExt 5513.0 ms ✓ Distributions → DistributionsChainRulesCoreExt 8402.9 ms ✓ ScientificTypes 8441.4 ms ✓ CategoricalDistributions 17432.9 ms ✓ MLJBase 8 dependencies successfully precompiled in 78 seconds. 138 already precompiled. Precompiling packages... 2743.4 ms ✓ DifferentiationInterface → DifferentiationInterfaceForwardDiffExt 4118.4 ms ✓ NLSolversBase 5891.6 ms ✓ LineSearches 10325.7 ms ✓ Optim 10453.9 ms ✓ MLJLinearModels 5 dependencies successfully precompiled in 37 seconds. 76 already precompiled. Precompiling packages... 3346.4 ms ✓ NNlib → NNlibForwardDiffExt 1 dependency successfully precompiled in 4 seconds. 49 already precompiled. Precompiling packages... 16550.4 ms ✓ MLJTestInterface 1 dependency successfully precompiled in 20 seconds. 163 already precompiled. Precompiling packages... 36027.3 ms ✓ StatisticalMeasures 10276.9 ms ✓ StatisticalMeasures → ScientificTypesExt 2 dependencies successfully precompiled in 52 seconds. 136 already precompiled. Precompiling packages... 12092.8 ms ✓ MLJBase → DefaultMeasuresExt 1 dependency successfully precompiled in 15 seconds. 148 already precompiled. Precompiling packages... 16523.5 ms ✓ SIRUS 1 dependency successfully precompiled in 20 seconds. 184 already precompiled. ┌ Warning: Unable to determine HTML(edit_link = ...) from remote HEAD branch, defaulting to "master". │ Calling `git remote` failed with an exception. Set JULIA_DEBUG=Documenter to see the error. │ Unless this is due to a configuration error, the relevant variable should be set explicitly. └ @ Documenter ~/.julia/packages/Documenter/eoWm2/src/utilities/utilities.jl:665 [ Info: SetupBuildDirectory: setting up build directory. [ Info: Doctest: running doctests. [ Info: Skipped ExpandTemplates step (doctest only). [ Info: Skipped CrossReferences step (doctest only). [ Info: Skipped CheckDocument step (doctest only). [ Info: Skipped Populate step (doctest only). [ Info: Skipped RenderDocument step (doctest only). Test Summary: | Pass Total Time docs | 30 30 1m14.7s Test Summary: | Pass Total Time empiricalquantiles | 6 6 2.5s Test Summary: | Pass Total Time forest | 110 110 2.3s Test Summary: | Pass Total Time classification | 16 16 1m01.3s Test Summary: | Pass Total Time regression | 4 4 6.7s Test Summary: | Pass Total Time rules | 15 15 56.1s Test Summary: | Pass Total Time ruleshow | 7 7 1.1s Test Summary: | Pass Total Time dependent | 1039 1039 2.4s Test Summary: | Pass Total Time weights | 3 3 0.6s Test Summary: | Pass Total Time importance | 9 9 2.1s Precompiling packages... 4399.1 ms ✓ StatsModels 15128.6 ms ✓ RCall 2 dependencies successfully precompiled in 22 seconds. 77 already precompiled. rcall: Error During Test at /home/pkgeval/.julia/packages/SIRUS/6Paa4/test/runtests.jl:44 Got exception outside of a @test LoadError: REvalError: Error in library("sirus") : there is no package called ‘sirus’ in expression starting at /home/pkgeval/.julia/packages/SIRUS/6Paa4/test/rcall.jl:39 Test Summary: | Error Total Time rcall | 1 1 32.5s RNG of the outermost testset: Random.Xoshiro(0x9ea90c435b1bc633, 0x5ca4a3886f85a93e, 0xd51e6cc7e4d3c155, 0x31f9489c4f37eb87, 0x3c00130a4c56f947) ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/SIRUS/6Paa4/test/runtests.jl:43 Testing failed after 820.6s ERROR: LoadError: Package SIRUS errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2446 [3] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2301 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:500 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:164 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:152 [7] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:152 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:151 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [10] include(mod::Module, _path::String) @ Base ./Base.jl:309 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:320 [12] _start() @ Base ./client.jl:553 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 1121.38s: package tests unexpectedly errored