Package evaluation of ColPack on Julia 1.13.0-DEV.834 (c3282ceaac*) started at 2025-07-08T12:41:39.195 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.36s ################################################################################ # Installation # Installing ColPack... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [ffa27691] + ColPack v0.5.0 Updating `~/.julia/environments/v1.13/Manifest.toml` [ffa27691] + ColPack v0.5.0 [692b3bcd] + JLLWrappers v1.7.0 [21216c6a] + Preferences v1.4.3 [f218ff0c] + ColPack_jll v0.4.3+0 [56f22d72] + Artifacts v1.11.0 [ade2ca70] + Dates v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.12.0 [fa267f1f] + TOML v1.0.3 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.13.1+0 Installation completed after 1.35s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 17.75s ################################################################################ # Testing # Testing ColPack Status `/tmp/jl_degKop/Project.toml` [4c88cf16] Aqua v0.8.13 [ffa27691] ColPack v0.5.0 [e30172f5] Documenter v1.13.0 [c3a54625] JET v0.10.6 [4d4711f2] MatrixMarket v0.5.2 [860ef19b] StableRNGs v1.0.3 [37e2e46d] LinearAlgebra v1.12.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.12.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_degKop/Manifest.toml` [a4c015fc] ANSIColoredPrinters v0.0.1 [1520ce14] AbstractTrees v0.4.5 [4c88cf16] Aqua v0.8.13 [da1fd8a2] CodeTracking v1.3.9 [944b1d66] CodecZlib v0.7.8 [ffa27691] ColPack v0.5.0 [34da2185] Compat v4.17.0 [807dbc54] Compiler v0.1.1 [ffbed154] DocStringExtensions v0.9.5 [e30172f5] Documenter v1.13.0 [d7ba0133] Git v1.4.0 [b5f81e59] IOCapture v0.2.5 [c3a54625] JET v0.10.6 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [aa1ae85d] JuliaInterpreter v0.10.3 [70703baa] JuliaSyntax v1.0.2 [0e77f7df] LazilyInitializedFields v1.3.0 [6f1432cf] LoweredCodeUtils v3.4.0 [1914dd2f] MacroTools v0.5.16 [d0879d2d] MarkdownAST v0.1.2 [4d4711f2] MatrixMarket v0.5.2 [69de0a69] Parsers v2.8.3 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [2792f1a3] RegistryInstances v0.1.0 [860ef19b] StableRNGs v1.0.3 [3bb67fe8] TranscodingStreams v0.11.3 [f218ff0c] ColPack_jll v0.4.3+0 [2e619515] Expat_jll v2.6.5+0 [f8c6e375] Git_jll v2.50.0+0 [94ce4f54] Libiconv_jll v1.18.0+0 [9bd350c2] OpenSSH_jll v10.0.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.14.1+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.5.20 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.1+0 [efcefdf7] PCRE2_jll v10.45.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Testing Running tests... Precompiling packages... 17826.1 ms ✓ Parsers 4121.1 ms ✓ JSON 57288.4 ms ✓ Documenter 3 dependencies successfully precompiled in 80 seconds. 49 already precompiled. Precompiling packages... 13112.4 ms ✓ JET 1 dependency successfully precompiled in 13 seconds. 36 already precompiled. JET: JET-test failed at /home/pkgeval/.julia/packages/JET/z9poX/src/JETBase.jl:1055 Expression: (JET.report_package)(ColPack; toplevel_logger = nothing, target_defined_modules = true) ═════ 1 toplevel error found ═════ ┌ @ /home/pkgeval/.julia/packages/ColPack/grwb5/src/ColPack.jl:22 │ ArgumentError: Package ColPack_jll not found in current path. │ - Run `import Pkg; Pkg.add("ColPack_jll")` to install the ColPack_jll package. │ Stacktrace: │ [1] macro expansion │ @ ./loading.jl:2377 [inlined] │ [2] macro expansion │ @ ./lock.jl:376 [inlined] │ [3] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2360 │ [4] require │ @ ./loading.jl:2336 [inlined] │ [5] eval_import_path │ @ ./module.jl:36 [inlined] │ [6] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base ./module.jl:60 │ [7] _eval_using(to::Module, path::Expr) │ @ Base ./module.jl:137 └───────────────────── ┌ Warning: Unable to determine HTML(edit_link = ...) from remote HEAD branch, defaulting to "master". │ Calling `git remote` failed with an exception. Set JULIA_DEBUG=Documenter to see the error. │ Unless this is due to a configuration error, the relevant variable should be set explicitly. └ @ Documenter ~/.julia/packages/Documenter/uNI6f/src/utilities/utilities.jl:665 [ Info: SetupBuildDirectory: setting up build directory. [ Info: Doctest: running doctests. [ Info: Skipped ExpandTemplates step (doctest only). [ Info: Skipped CrossReferences step (doctest only). [ Info: Skipped CheckDocument step (doctest only). [ Info: Skipped Populate step (doctest only). [ Info: Skipped RenderDocument step (doctest only). Precompiling packages... 1362.8 ms ✓ MatrixMarket 1 dependency successfully precompiled in 1 seconds. 6 already precompiled. [19] signal 11 (1): Segmentation fault in expression starting at /home/pkgeval/.julia/packages/ColPack/grwb5/test/coloring.jl:80 _ZN7ColPack29BipartiteGraphPartialColoring36PartialDistanceTwoRowColoring_serialEv at /home/pkgeval/.julia/artifacts/b67e35031f029823136202bee346115d7adaf01a/lib/libcolpack.so (unknown line) _ZN7ColPack38BipartiteGraphPartialColoringInterface26PartialDistanceTwoColoringENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_ at /home/pkgeval/.julia/artifacts/b67e35031f029823136202bee346115d7adaf01a/lib/libcolpack.so (unknown line) build_partial_coloring_from_file at /home/pkgeval/.julia/artifacts/b67e35031f029823136202bee346115d7adaf01a/lib/libcolpack.so (unknown line) build_partial_coloring_from_file at /home/pkgeval/.julia/packages/ColPack/grwb5/src/libcolpack.jl:13 [inlined] #ColPackPartialColoring#4 at /home/pkgeval/.julia/packages/ColPack/grwb5/src/colpack_partial_coloring.jl:76 ColPackPartialColoring at /home/pkgeval/.julia/packages/ColPack/grwb5/src/colpack_partial_coloring.jl:65 [inlined] macro expansion at /home/pkgeval/.julia/packages/ColPack/grwb5/test/coloring.jl:88 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.13/Test/src/Test.jl:1944 [inlined] macro expansion at /home/pkgeval/.julia/packages/ColPack/grwb5/test/coloring.jl:83 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.13/Test/src/Test.jl:1944 [inlined] macro expansion at /home/pkgeval/.julia/packages/ColPack/grwb5/test/coloring.jl:82 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.13/Test/src/Test.jl:1944 [inlined] macro expansion at /home/pkgeval/.julia/packages/ColPack/grwb5/test/coloring.jl:81 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.13/Test/src/Test.jl:1855 [inlined] top-level scope at /home/pkgeval/.julia/packages/ColPack/grwb5/test/coloring.jl:81 _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_invoke at /source/src/gf.c:3800 jl_toplevel_eval_flex at /source/src/toplevel.c:762 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2847 _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 _include at ./loading.jl:2907 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_48990.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2847 _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 _include at ./loading.jl:2907 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_48990.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 exec_options at ./client.jl:290 _start at ./client.jl:557 jfptr__start_66103.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3793 [inlined] ijl_apply_generic at /source/src/gf.c:3993 jl_apply at /source/src/julia.h:2345 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7fe4c5022249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S Allocations: 141309757 (Pool: 141308919; Big: 838); GC: 47 Testing failed after 560.03s ERROR: LoadError: Package ColPack errored during testing (received signal: 11) Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2446 [3] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2301 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:500 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:164 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:152 [7] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:152 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:151 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [10] include(mod::Module, _path::String) @ Base ./Base.jl:309 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:324 [12] _start() @ Base ./client.jl:557 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval crashed after 603.75s: a segmentation fault happened ################################################################################ # Bug reporting # The package crashed during testing (reason=segfault), but PkgEval was unable to reproduce the crash under rr (status=fail, reason=missing_package). For debugging, here is the tail end of the rr log: > JET: JET-test failed at /home/pkgeval/.julia/packages/JET/z9poX/src/JETBase.jl:1055 > Expression: (JET.report_package)(ColPack; toplevel_logger = nothing, target_defined_modules = true) > ═════ 1 toplevel error found ═════ > ┌ @ /home/pkgeval/.julia/packages/ColPack/grwb5/src/ColPack.jl:22 > │ ArgumentError: Package ColPack_jll not found in current path. > │ - Run `import Pkg; Pkg.add("ColPack_jll")` to install the ColPack_jll package. > │ Stacktrace: > │ [1] macro expansion > │ @ ./loading.jl:2377 [inlined] > │ [2] macro expansion > │ @ ./lock.jl:376 [inlined] > │ [3] __require(into::Module, mod::Symbol) > │ @ Base ./loading.jl:2360 > │ [4] require > │ @ ./loading.jl:2336 [inlined] > │ [5] eval_import_path > │ @ ./module.jl:36 [inlined] > │ [6] eval_import_path_all(at::Module, path::Expr, keyword::String) > │ @ Base ./module.jl:60 > │ [7] _eval_using(to::Module, path::Expr) > │ @ Base ./module.jl:137 > └───────────────────── > > ┌ Warning: Unable to determine HTML(edit_link = ...) from remote HEAD branch, defaulting to "master". > │ Calling `git remote` failed with an exception. Set JULIA_DEBUG=Documenter to see the error. > │ Unless this is due to a configuration error, the relevant variable should be set explicitly. > └ @ Documenter ~/.julia/packages/Documenter/uNI6f/src/utilities/utilities.jl:665 > [ Info: SetupBuildDirectory: setting up build directory. > [ Info: Doctest: running doctests. > [ Info: Skipped ExpandTemplates step (doctest only). > [ Info: Skipped CrossReferences step (doctest only). > [ Info: Skipped CheckDocument step (doctest only). > [ Info: Skipped Populate step (doctest only). > [ Info: Skipped RenderDocument step (doctest only). > Test Summary: | Pass Fail Total Time > ColPack | 22170 1 22171 5m15.7s > Code quality | 11 1 12 3m43.2s > Method ambiguity | 1 1 13.9s > Unbound type parameters | 1 1 0.1s > Undefined exports | 1 1 0.0s > Compare Project.toml and test/Project.toml | 1 1 0.4s > Stale dependencies | 1 1 5.6s > Compat bounds | 4 4 0.7s > Piracy | 1 1 0.2s > Persistent tasks | 1 1 27.6s > JET | 1 1 2m41.8s > Doctests | 1 1 1m11.4s > Coloring | 22147 22147 20.4s > General graph coloring | 11088 11088 6.8s > DISTANCE_ONE | 1584 1584 5.5s > ACYCLIC | 1584 1584 0.2s > ACYCLIC_FOR_INDIRECT_RECOVERY | 1584 1584 0.2s > STAR | 1584 1584 0.2s > NAIVE_STAR | 1584 1584 0.2s > RESTRICTED_STAR | 1584 1584 0.2s > DISTANCE_TWO | 1584 1584 0.3s > Bipartite graph partial coloring | 5683 5683 2.2s > COLUMN_PARTIAL_DISTANCE_TWO | 2848 2848 1.8s > ROW_PARTIAL_DISTANCE_TWO | 2835 2835 0.4s > Bipartite graph bicoloring | 5376 5376 2.0s > IMPLICIT_COVERING__STAR_BICOLORING | 1344 1344 0.6s > EXPLICIT_COVERING__STAR_BICOLORING | 1344 1344 0.4s > EXPLICIT_COVERING__MODIFIED_STAR_BICOLORING | 1344 1344 0.6s > IMPLICIT_COVERING__GREEDY_STAR_BICOLORING | 1344 1344 0.4s > Exceptions | 11 11 0.7s > RNG of the outermost testset: Xoshiro(0x0427dd35b403f83b, 0x3252a5b3e8a8b6ab, 0x8abe5300fd64fcf7, 0x738d269621224e85, 0x79b37b7148e732b2) > ERROR: LoadError: Some tests did not pass: 22170 passed, 1 failed, 0 errored, 0 broken. > in expression starting at /home/pkgeval/.julia/packages/ColPack/grwb5/test/runtests.jl:7 > > Testing failed after 391.86s > > ERROR: LoadError: Package ColPack errored during testing > Stacktrace: > [1] pkgerror(msg::String) > @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 > [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) > @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2446 > [3] test > @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2301 [inlined] > [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) > @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:500 > [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) > @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:164 > [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) > @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:152 > [7] test > @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:152 [inlined] > [8] #test#81 > @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:151 [inlined] > [9] top-level scope > @ /PkgEval.jl/scripts/evaluate.jl:217 > [10] include(mod::Module, _path::String) > @ Base ./Base.jl:309 > [11] exec_options(opts::Base.JLOptions) > @ Base ./client.jl:324 > [12] _start() > @ Base ./client.jl:557 > in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 > > PkgEval failed after 439.37s: package is using an unknown package