Package evaluation of StateSpaceDynamics on Julia 1.13.0-DEV.794 (d7c70bcbab*) started at 2025-07-02T14:05:55.555 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.34s ################################################################################ # Installation # Installing StateSpaceDynamics... Resolving package versions... Installed ConstructionBase ───────── v1.6.0 Installed MacroTools ─────────────── v0.5.16 Installed FillArrays ─────────────── v1.13.0 Installed Rmath_jll ──────────────── v0.5.1+0 Installed DiffResults ────────────── v1.1.0 Installed Adapt ──────────────────── v4.3.0 Installed ForwardDiff ────────────── v0.10.38 Installed HypergeometricFunctions ── v0.3.28 Installed AliasTables ────────────── v1.1.3 Installed DataStructures ─────────── v0.18.22 Installed OrderedCollections ─────── v1.8.1 Installed StatsBase ──────────────── v0.34.5 Installed ArrayInterface ─────────── v7.19.0 Installed DataAPI ────────────────── v1.16.0 Installed Compat ─────────────────── v4.17.0 Installed Statistics ─────────────── v1.11.1 Installed PositiveFactorizations ─── v0.2.4 Installed Optim ──────────────────── v1.13.2 Installed StatsAPI ───────────────── v1.7.1 Installed CommonSubexpressions ───── v0.3.1 Installed ProgressMeter ──────────── v1.10.4 Installed IrrationalConstants ────── v0.2.4 Installed StaticArraysCore ───────── v1.4.3 Installed PrecompileTools ────────── v1.3.2 Installed QuadGK ─────────────────── v2.11.2 Installed StaticArrays ───────────── v1.9.13 Installed NaNMath ────────────────── v1.1.3 Installed Requires ───────────────── v1.3.1 Installed OpenSpecFun_jll ────────── v0.5.6+0 Installed ArrayLayouts ───────────── v1.11.1 Installed LogExpFunctions ────────── v0.3.29 Installed FiniteDiff ─────────────── v2.27.0 Installed DiffRules ──────────────── v1.15.1 Installed Rmath ──────────────────── v0.8.0 Installed Parameters ─────────────── v0.12.3 Installed Distributions ──────────── v0.25.120 Installed StatsFuns ──────────────── v1.5.0 Installed PtrArrays ──────────────── v1.3.0 Installed EnumX ──────────────────── v1.0.5 Installed NLSolversBase ──────────── v7.10.0 Installed Setfield ───────────────── v1.1.2 Installed Reexport ───────────────── v1.2.2 Installed SpecialFunctions ───────── v2.5.1 Installed Missings ───────────────── v1.2.0 Installed JLLWrappers ────────────── v1.7.0 Installed Preferences ────────────── v1.4.3 Installed LineSearches ───────────── v7.4.0 Installed PDMats ─────────────────── v0.11.35 Installed UnPack ─────────────────── v1.0.2 Installed SortingAlgorithms ──────── v1.2.1 Installed ADTypes ────────────────── v1.15.0 Installed DocStringExtensions ────── v0.9.5 Installed DifferentiationInterface ─ v0.7.1 Installed StateSpaceDynamics ─────── v0.1.1 Installing 2 artifacts Installed artifact OpenSpecFun 194.9 KiB Installed artifact Rmath 121.9 KiB Updating `~/.julia/environments/v1.13/Project.toml` [19cf8126] + StateSpaceDynamics v0.1.1 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.15.0 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.19.0 [4c555306] + ArrayLayouts v1.11.1 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.17.0 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.1 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 ⌅ [f6369f11] + ForwardDiff v0.10.38 [34004b35] + HypergeometricFunctions v0.3.28 [92d709cd] + IrrationalConstants v0.2.4 [692b3bcd] + JLLWrappers v1.7.0 [d3d80556] + LineSearches v7.4.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [429524aa] + Optim v1.13.2 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [d96e819e] + Parameters v0.12.3 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [92933f4c] + ProgressMeter v1.10.4 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.1 [19cf8126] + StateSpaceDynamics v0.1.1 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.5 [4c63d2b9] + StatsFuns v1.5.0 [3a884ed6] + UnPack v1.0.2 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.13.1+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building StateSpaceDynamics → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/0ec6b0fe096ace18afbae1bd8cfc34fe6bef7436/build.log` Installation completed after 12.02s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 5235.3 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 26 already precompiled. Precompiling package dependencies... Precompilation completed after 639.0s ################################################################################ # Testing # Testing StateSpaceDynamics Status `/tmp/jl_zJLtAK/Project.toml` [4c88cf16] Aqua v0.8.13 [336ed68f] CSV v0.10.15 [a2441757] Coverage v1.6.1 [a93c6f00] DataFrames v1.7.0 [31c24e10] Distributions v0.25.120 ⌅ [f6369f11] ForwardDiff v0.10.38 [98e50ef6] JuliaFormatter v2.1.2 [23992714] MAT v0.10.7 [429524aa] Optim v1.13.2 [276daf66] SpecialFunctions v2.5.1 [19cf8126] StateSpaceDynamics v0.1.1 [4c63d2b9] StatsFuns v1.5.0 [37e2e46d] LinearAlgebra v1.12.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_zJLtAK/Manifest.toml` [47edcb42] ADTypes v1.15.0 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [4c88cf16] Aqua v0.8.13 [4fba245c] ArrayInterface v7.19.0 [4c555306] ArrayLayouts v1.11.1 [d1d4a3ce] BitFlags v0.1.9 [e1450e63] BufferedStreams v1.2.2 [336ed68f] CSV v0.10.15 [944b1d66] CodecZlib v0.7.8 [a80b9123] CommonMark v0.9.1 [bbf7d656] 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v2025.5.20 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.0+0 [efcefdf7] PCRE2_jll v10.45.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Test Summary: | Pass Total Time Package Wide Tests | 11 11 1m24.4s Test Summary: | Pass Total Time SLDS Tests | 4062 4062 1m55.8s Fitting LDS via EM... 2%|█ | ETA: 0:00:06 (61.21 ms/it) Fitting LDS via EM... 20%|██████████ | ETA: 0:00:02 (19.28 ms/it) Fitting LDS via EM... 36%|██████████████████ | ETA: 0:00:01 (13.81 ms/it) Fitting LDS via EM... 51%|█████████████████████████▌ | ETA: 0:00:01 (11.83 ms/it) Fitting LDS via EM... 66%|█████████████████████████████████ | ETA: 0:00:00 (10.71 ms/it) Fitting LDS via EM... 80%|████████████████████████████████████████ | ETA: 0:00:00 (10.70 ms/it) Fitting LDS via EM... 95%|███████████████████████████████████████████████▌ | ETA: 0:00:00 (10.09 ms/it) Fitting LDS via EM... 100%|██████████████████████████████████████████████████| Time: 0:00:00 ( 9.93 ms/it) Fitting LDS via EM... 5%|██▌ | ETA: 0:00:02 (20.12 ms/it) Fitting LDS via EM... 10%|█████ | ETA: 0:00:02 (20.54 ms/it) Fitting LDS via EM... 15%|███████▌ | ETA: 0:00:02 (23.67 ms/it) Fitting LDS via EM... 21%|██████████▌ | ETA: 0:00:02 (22.66 ms/it) Fitting LDS via EM... 26%|█████████████ | ETA: 0:00:02 (22.29 ms/it) Fitting LDS via EM... 31%|███████████████▌ | ETA: 0:00:02 (22.05 ms/it) Fitting LDS via EM... 36%|██████████████████ | ETA: 0:00:01 (22.81 ms/it) Fitting LDS via EM... 42%|█████████████████████ | ETA: 0:00:01 (22.41 ms/it) Fitting LDS via EM... 47%|███████████████████████▌ | ETA: 0:00:01 (22.22 ms/it) Fitting LDS via EM... 52%|██████████████████████████ | ETA: 0:00:01 (22.42 ms/it) Fitting LDS via EM... 57%|████████████████████████████▌ | ETA: 0:00:01 (22.28 ms/it) Fitting LDS via EM... 63%|███████████████████████████████▌ | ETA: 0:00:01 (21.96 ms/it) Fitting LDS via EM... 69%|██████████████████████████████████▌ | ETA: 0:00:01 (21.76 ms/it) Fitting LDS via EM... 73%|████████████████████████████████████▌ | ETA: 0:00:01 (21.98 ms/it) Fitting LDS via EM... 79%|███████████████████████████████████████▌ | ETA: 0:00:00 (21.82 ms/it) Fitting LDS via EM... 85%|██████████████████████████████████████████▌ | ETA: 0:00:00 (21.69 ms/it) Fitting LDS via EM... 89%|████████████████████████████████████████████▌ | ETA: 0:00:00 (21.84 ms/it) Fitting LDS via EM... 95%|███████████████████████████████████████████████▌ | ETA: 0:00:00 (21.69 ms/it) Fitting LDS via EM... 100%|██████████████████████████████████████████████████| Time: 0:00:02 (21.59 ms/it) Test Summary: | Pass Total Time GaussianLDS Tests | 66 66 2m02.7s WARNING: Method definition test_Gradient() in module Main at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/GaussianLDS.jl:78 overwritten at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/PoissonLDS.jl:68. WARNING: Method definition test_Hessian() in module Main at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/GaussianLDS.jl:94 overwritten at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/PoissonLDS.jl:84. WARNING: Method definition test_smooth() in module Main at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/GaussianLDS.jl:117 overwritten at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/PoissonLDS.jl:109. WARNING: Method definition test_initial_observation_parameter_updates() in module Main at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/GaussianLDS.jl:158 overwritten at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/PoissonLDS.jl:161. WARNING: Method definition test_initial_observation_parameter_updates(Int64) in module Main at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/GaussianLDS.jl:158 overwritten at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/PoissonLDS.jl:161. WARNING: Method definition test_state_model_parameter_updates() in module Main at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/GaussianLDS.jl:195 overwritten at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/PoissonLDS.jl:198. WARNING: Method definition test_state_model_parameter_updates(Int64) in module Main at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/GaussianLDS.jl:195 overwritten at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/PoissonLDS.jl:198. WARNING: Method definition test_EM() in module Main at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/GaussianLDS.jl:285 overwritten at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/PoissonLDS.jl:237. WARNING: Method definition test_EM(Int64) in module Main at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/GaussianLDS.jl:285 overwritten at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/PoissonLDS.jl:237. Fitting Poisson LDS via LaPlaceEM... 2%|█ | ETA: 0:00:19 ( 0.19 s/it) Fitting Poisson LDS via LaPlaceEM... 5%|██▌ | ETA: 0:00:09 (99.35 ms/it) Fitting Poisson LDS via LaPlaceEM... 8%|████ | ETA: 0:00:08 (82.44 ms/it) Fitting Poisson LDS via LaPlaceEM... 11%|█████▌ | ETA: 0:00:06 (69.75 ms/it) Fitting Poisson LDS via LaPlaceEM... 14%|███████ | ETA: 0:00:06 (66.07 ms/it) Fitting Poisson LDS via LaPlaceEM... 17%|████████▌ | ETA: 0:00:05 (61.34 ms/it) Fitting Poisson LDS via LaPlaceEM... 20%|██████████ | ETA: 0:00:05 (57.89 ms/it) Fitting Poisson LDS via LaPlaceEM... 23%|███████████▌ | ETA: 0:00:04 (57.10 ms/it) Fitting Poisson LDS via LaPlaceEM... 26%|█████████████ | ETA: 0:00:04 (55.37 ms/it) Fitting Poisson LDS via LaPlaceEM... 29%|██████████████▌ | ETA: 0:00:04 (53.87 ms/it) Fitting Poisson LDS via LaPlaceEM... 31%|███████████████▌ | ETA: 0:00:04 (53.72 ms/it) Fitting Poisson LDS via LaPlaceEM... 34%|█████████████████ | ETA: 0:00:03 (52.41 ms/it) Fitting Poisson LDS via LaPlaceEM... 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0:00:02 ( 0.12 s/it) Fitting Poisson LDS via LaPlaceEM... 86%|███████████████████████████████████████████ | ETA: 0:00:02 ( 0.12 s/it) Fitting Poisson LDS via LaPlaceEM... 87%|███████████████████████████████████████████▌ | ETA: 0:00:02 ( 0.12 s/it) Fitting Poisson LDS via LaPlaceEM... 89%|████████████████████████████████████████████▌ | ETA: 0:00:01 ( 0.12 s/it) Fitting Poisson LDS via LaPlaceEM... 90%|█████████████████████████████████████████████ | ETA: 0:00:01 ( 0.12 s/it) Fitting Poisson LDS via LaPlaceEM... 92%|██████████████████████████████████████████████ | ETA: 0:00:01 ( 0.12 s/it) Fitting Poisson LDS via LaPlaceEM... 94%|███████████████████████████████████████████████ | ETA: 0:00:01 ( 0.12 s/it) Fitting Poisson LDS via LaPlaceEM... 95%|███████████████████████████████████████████████▌ | ETA: 0:00:01 ( 0.12 s/it) Fitting Poisson LDS via LaPlaceEM... 97%|████████████████████████████████████████████████▌ | ETA: 0:00:00 ( 0.12 s/it) Fitting Poisson LDS via LaPlaceEM... 98%|█████████████████████████████████████████████████ | ETA: 0:00:00 ( 0.12 s/it) Fitting Poisson LDS via LaPlaceEM... 99%|█████████████████████████████████████████████████▌| ETA: 0:00:00 ( 0.12 s/it) Fitting Poisson LDS via LaPlaceEM... 100%|██████████████████████████████████████████████████| Time: 0:00:11 ( 0.12 s/it) Test Summary: | Pass Total Time PoissonLDS Tests | 62 62 2m30.5s Running EM algorithm... 2%|█ | ETA: 0:02:56 ( 1.79 s/it) Running EM algorithm... 3%|█▌ | ETA: 0:02:04 ( 1.28 s/it) Running EM algorithm... 100%|██████████████████████████████████████████████████| Time: 0:00:03 (38.41 ms/it) ┌ Warning: User did not provide as many emmission models as the function expects (K=2). │ Filling in the rest with deep copies of the provided emission model. │ If this is not the desired behavior, specify all the emission models in the 'B=Vector{EmissionModel}' argument │ rather than 'emission' └ @ StateSpaceDynamics ~/.julia/packages/StateSpaceDynamics/zrsML/src/HiddenMarkovModels.jl:75 Test Summary: | Pass Total Time GaussianHMM Tests | 21 21 42.7s Running EM algorithm... 1%|▌ | ETA: 0:00:38 ( 0.19 s/it) Running EM algorithm... 2%|▊ | ETA: 0:00:40 ( 0.20 s/it) Running EM algorithm... 2%|█ | ETA: 0:00:48 ( 0.24 s/it) Running EM algorithm... 2%|█▎ | ETA: 0:01:25 ( 0.43 s/it) Running EM algorithm... 3%|█▌ | ETA: 0:01:18 ( 0.40 s/it) Running EM algorithm... 4%|█▊ | ETA: 0:01:12 ( 0.37 s/it) Running EM algorithm... 4%|██ | ETA: 0:01:07 ( 0.35 s/it) Running EM algorithm... 4%|██▎ | ETA: 0:01:03 ( 0.33 s/it) Running EM algorithm... 100%|██████████████████████████████████████████████████| Time: 0:00:02 (14.82 ms/it) Test Summary: | Pass Broken Total Time Switching Gaussian Regression Tests | 10 2 12 21.5s WARNING: Method definition sample_states(Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/HiddenMarkovModels/SwitchingGaussianRegression.jl:164 overwritten at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/HiddenMarkovModels/SwitchingPoissonRegression.jl:124. Running EM algorithm... 1%|▌ | ETA: 0:02:32 ( 0.77 s/it) Running EM algorithm... 2%|▊ | ETA: 0:02:32 ( 0.77 s/it) Running EM algorithm... 2%|█ | ETA: 0:02:22 ( 0.73 s/it) Running EM algorithm... 2%|█▎ | ETA: 0:02:11 ( 0.67 s/it) Running EM algorithm... 3%|█▌ | ETA: 0:02:01 ( 0.62 s/it) Running EM algorithm... 4%|█▊ | ETA: 0:01:51 ( 0.58 s/it) Running EM algorithm... 4%|██ | ETA: 0:01:44 ( 0.54 s/it) Running EM algorithm... 4%|██▎ | ETA: 0:01:39 ( 0.52 s/it) Running EM algorithm... 5%|██▌ | ETA: 0:01:34 ( 0.50 s/it) Running EM algorithm... 6%|██▊ | ETA: 0:01:31 ( 0.48 s/it) Running EM algorithm... 6%|███ | ETA: 0:01:28 ( 0.47 s/it) Running EM algorithm... 6%|███▎ | ETA: 0:01:25 ( 0.45 s/it) Running EM algorithm... 7%|███▌ | ETA: 0:01:23 ( 0.44 s/it) Running EM algorithm... 8%|███▊ | ETA: 0:01:20 ( 0.43 s/it) Running EM algorithm... 8%|████ | ETA: 0:01:18 ( 0.43 s/it) Running EM algorithm... 8%|████▎ | ETA: 0:01:16 ( 0.42 s/it) Running EM algorithm... 9%|████▌ | ETA: 0:01:15 ( 0.41 s/it) Running EM algorithm... 10%|████▊ | ETA: 0:01:13 ( 0.40 s/it) Running EM algorithm... 10%|█████ | ETA: 0:01:11 ( 0.40 s/it) Running EM algorithm... 10%|█████▎ | ETA: 0:01:10 ( 0.39 s/it) Running EM algorithm... 11%|█████▌ | ETA: 0:01:09 ( 0.39 s/it) Running EM algorithm... 100%|██████████████████████████████████████████████████| Time: 0:00:08 (42.67 ms/it) Test Summary: | Pass Total Time Switching Poisson Regression Tests | 7 7 29.2s Running EM algorithm... 1%|▌ | ETA: 0:01:17 ( 0.39 s/it) Running EM algorithm... 2%|▊ | ETA: 0:02:36 ( 0.79 s/it) Running EM algorithm... 2%|█ | ETA: 0:02:21 ( 0.72 s/it) Running EM algorithm... 2%|█▎ | ETA: 0:02:14 ( 0.69 s/it) Running EM algorithm... 3%|█▌ | ETA: 0:02:04 ( 0.64 s/it) Running EM algorithm... 4%|█▊ | ETA: 0:01:56 ( 0.60 s/it) Running EM algorithm... 4%|██ | ETA: 0:01:50 ( 0.57 s/it) Running EM algorithm... 4%|██▎ | ETA: 0:01:43 ( 0.54 s/it) Running EM algorithm... 5%|██▌ | ETA: 0:01:38 ( 0.52 s/it) Running EM algorithm... 6%|██▊ | ETA: 0:01:35 ( 0.50 s/it) Running EM algorithm... 6%|███ | ETA: 0:01:32 ( 0.49 s/it) Running EM algorithm... 6%|███▎ | ETA: 0:01:30 ( 0.48 s/it) Running EM algorithm... 7%|███▌ | ETA: 0:01:28 ( 0.47 s/it) Running EM algorithm... 8%|███▊ | ETA: 0:01:26 ( 0.46 s/it) Running EM algorithm... 8%|████ | ETA: 0:01:24 ( 0.45 s/it) Running EM algorithm... 8%|████▎ | ETA: 0:01:21 ( 0.44 s/it) Running EM algorithm... 9%|████▌ | ETA: 0:01:19 ( 0.44 s/it) Running EM algorithm... 10%|████▊ | ETA: 0:01:17 ( 0.43 s/it) Running EM algorithm... 10%|█████ | ETA: 0:01:15 ( 0.42 s/it) Running EM algorithm... 10%|█████▎ | ETA: 0:01:13 ( 0.41 s/it) Running EM algorithm... 11%|█████▌ | ETA: 0:01:11 ( 0.40 s/it) Running EM algorithm... 12%|█████▊ | ETA: 0:01:10 ( 0.39 s/it) Running EM algorithm... 12%|██████ | ETA: 0:01:08 ( 0.39 s/it) Running EM algorithm... 12%|██████▎ | ETA: 0:01:07 ( 0.38 s/it) Running EM algorithm... 13%|██████▌ | ETA: 0:01:05 ( 0.37 s/it) Running EM algorithm... 14%|██████▊ | ETA: 0:01:03 ( 0.37 s/it) Running EM algorithm... 14%|███████ | ETA: 0:01:02 ( 0.36 s/it) Running EM algorithm... 14%|███████▎ | ETA: 0:01:01 ( 0.36 s/it) Running EM algorithm... 15%|███████▌ | ETA: 0:01:00 ( 0.35 s/it) Running EM algorithm... 16%|███████▊ | ETA: 0:00:59 ( 0.35 s/it) Running EM algorithm... 16%|████████ | ETA: 0:00:58 ( 0.34 s/it) Running EM algorithm... 16%|████████▎ | ETA: 0:00:57 ( 0.34 s/it) Running EM algorithm... 17%|████████▌ | ETA: 0:00:55 ( 0.33 s/it) Running EM algorithm... 18%|████████▊ | ETA: 0:00:54 ( 0.33 s/it) Running EM algorithm... 18%|█████████ | ETA: 0:00:53 ( 0.33 s/it) Running EM algorithm... 18%|█████████▎ | ETA: 0:00:52 ( 0.32 s/it) Running EM algorithm... 19%|█████████▌ | ETA: 0:00:52 ( 0.32 s/it) Running EM algorithm... 20%|█████████▊ | ETA: 0:00:51 ( 0.32 s/it) Running EM algorithm... 20%|██████████ | ETA: 0:00:50 ( 0.31 s/it) Running EM algorithm... 20%|██████████▎ | ETA: 0:00:49 ( 0.31 s/it) Running EM algorithm... 100%|██████████████████████████████████████████████████| Time: 0:00:12 (63.49 ms/it) Test Summary: | Pass Total Time Switching Bernoulli Regression Tests | 8 8 27.6s Iteration: 1, Log-likelihood: -25.926804357333136 Iteration: 2, Log-likelihood: -25.926804357333136 Convergence reached at iteration 2 Iteration: 1, Log-likelihood: -22.608663852916926 Iteration: 1, Log-likelihood: -19.89523438030061 Iteration: 1, Log-likelihood: -17.543741428903775 Iteration: 1, Log-likelihood: -16.21131546119284 Iteration: 1, Log-likelihood: -15.801015549686383 Iteration: 1, Log-likelihood: -15.195926269533215 Iteration: 1, Log-likelihood: -13.531440107412841 Iteration: 1, Log-likelihood: -4.574662411179716 Iteration: 1, Log-likelihood: 5.893722652943553 Iteration: 1, Log-likelihood: 7.606510108215633 Iteration: 1, Log-likelihood: -1420.6519708452615 Iteration: 2, Log-likelihood: -1420.5180295007503 Iteration: 3, Log-likelihood: -1420.4577014923725 Iteration: 4, Log-likelihood: -1420.412803965683 Iteration: 5, Log-likelihood: -1420.3751901350333 Iteration: 6, Log-likelihood: -1420.3428686149869 Iteration: 7, Log-likelihood: -1420.3148310251581 Iteration: 8, Log-likelihood: -1420.2903529278535 Iteration: 9, Log-likelihood: -1420.2688648244446 Iteration: 10, Log-likelihood: -1420.2499078379185 Iteration: 1, Log-likelihood: -1422.5868754789972 Iteration: 1, Log-likelihood: -1421.9170810768508 Iteration: 1, Log-likelihood: -1421.5365270212344 Iteration: 1, Log-likelihood: -1421.2645769641772 Iteration: 1, Log-likelihood: -1421.060278934841 Iteration: 1, Log-likelihood: -1420.9025606332384 Iteration: 1, Log-likelihood: -1420.7781986464538 Iteration: 1, Log-likelihood: -1420.6783944621186 Iteration: 1, Log-likelihood: -1420.5970869786718 Iteration: 1, Log-likelihood: -1420.5299843691312 Iteration: 1, Log-likelihood: -897.3411525165596 Iteration: 2, Log-likelihood: -897.2377250823765 Iteration: 3, Log-likelihood: -897.1978010462682 Iteration: 4, Log-likelihood: -897.1599411460613 Iteration: 5, Log-likelihood: -897.123113306237 Iteration: 6, Log-likelihood: -897.0873364948343 Iteration: 7, Log-likelihood: -897.0526378160233 Iteration: 8, Log-likelihood: -897.0190273090092 Iteration: 9, Log-likelihood: -896.986497177138 Iteration: 10, Log-likelihood: -896.9550241081455 Iteration: 1, Log-likelihood: -897.0806973526251 Iteration: 1, Log-likelihood: -896.5905109370283 Iteration: 1, Log-likelihood: -896.450771421194 Iteration: 1, Log-likelihood: -896.3901083174178 Iteration: 1, Log-likelihood: -896.349657079935 Iteration: 1, Log-likelihood: -896.3157729520744 Iteration: 1, Log-likelihood: -896.2850045982427 Iteration: 1, Log-likelihood: -896.2563252673461 Iteration: 1, Log-likelihood: -896.2293246750285 Iteration: 1, Log-likelihood: -896.203770789536 Test Summary: | Pass Total Time MixtureModels.jl Tests | 129 129 10.5s Test Summary: | Pass Total Time GaussianRegression Tests | 27 27 10.9s Test Summary: | Pass Total Time BernoulliRegression Tests | 24 24 8.6s Test Summary: | Pass Broken Total Time PoissonRegression Tests | 22 2 24 11.9s Test Summary: | Pass Total Time AutoRegression Tests | 4 4 0.2s [2.8775397047671825 -2.1256532162277924 -2.7016695984695844 -0.7057931364084695 -0.764503356916743 6.347387798973542 -1.259137757340574 -1.754899494683262 2.5989630133297084 2.334357599663359 1.636115576486322 -2.23236441176788 -0.23908030756335796 3.356949288688522 3.5968717187595463 -0.11903053726887425 -2.3421419564884047 -2.48288200637663 -1.779094270463564 0.183635569317059 -1.1890781338467835 0.8639069754108195 -4.160978011945081 -3.427278870940885 -2.7271128153874074 2.3826613435496586 -2.7912727187836097 0.9494693712088804 -0.6952277851162184 1.2442324756530212 4.3223580254484055 -0.7991272944487919 3.9876545810941866 -1.5792586150083736 -0.6335293902876067 -1.0444887158389526 -0.6588288269460434 -1.239574075543953 -3.6210646994030586 0.239056114333918 0.5513721523070394 -0.2156278517915866 -2.479548552218198 2.1243778318029523 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-0.2943253924195821 -3.681649238287025 -0.39936917684756107 0.45042427035129107 -1.143750295961442 -0.7566051535970435 -0.7361707949463673 -0.8481023077576938 -4.673059830856223 3.3766868765733675 2.317386675540341 1.182733055883612 -0.3004385310771186 -1.7522418193089524 -3.9866965620085266 -1.505005262668384 -1.446162792768121 2.487009552882727 0.24440627400173964 -0.3942391683263293 0.9616096987737925 1.6790088657799056 -3.4057203322977943 -0.9146387762291541 0.9556427189260077 0.04838961697481958 0.8885221140735339 0.33421463038221544 0.047891720161564844 -0.7417725750632302 2.5780900185021345 2.3569273455427115 -1.3668441939400227]Test Summary: | Pass Total Time AutoRegressive HMM Tests | 10 10 7.8s Test Summary: | Pass Total Time Utilities.jl Tests | 76 76 7.5s Fitting Probabilistic PCA... 2%|▌ | ETA: 0:00:26 Fitting Probabilistic PCA... 100%|███████████████████████| Time: 0:00:00 Test Summary: | Pass Total Time PPCA Tests | 23 23 10.6s Running EM algorithm... 2%|█ | ETA: 0:00:56 ( 0.57 s/it) Running EM algorithm... 3%|█▌ | ETA: 0:00:50 ( 0.52 s/it) Running EM algorithm... 4%|██ | ETA: 0:00:44 ( 0.46 s/it) Running EM algorithm... 5%|██▌ | ETA: 0:00:43 ( 0.45 s/it) Running EM algorithm... 6%|███ | ETA: 0:00:41 ( 0.43 s/it) Running EM algorithm... 7%|███▌ | ETA: 0:00:38 ( 0.41 s/it) Running EM algorithm... 8%|████ | ETA: 0:00:37 ( 0.40 s/it) Running EM algorithm... 9%|████▌ | ETA: 0:00:46 ( 0.51 s/it) Running EM algorithm... 10%|█████ | ETA: 0:00:45 ( 0.50 s/it) Running EM algorithm... 11%|█████▌ | ETA: 0:00:45 ( 0.50 s/it) Running EM algorithm... 12%|██████ | ETA: 0:00:44 ( 0.50 s/it) Running EM algorithm... 13%|██████▌ | ETA: 0:00:43 ( 0.49 s/it) Running EM algorithm... 14%|███████ | ETA: 0:00:42 ( 0.49 s/it) Running EM algorithm... 15%|███████▌ | ETA: 0:00:41 ( 0.48 s/it) Running EM algorithm... 16%|████████ | ETA: 0:00:40 ( 0.48 s/it) Running EM algorithm... 100%|██████████████████████████████████████████████████| Time: 0:00:07 (76.41 ms/it) Running EM algorithm... 2%|█ | ETA: 0:00:26 ( 0.27 s/it) Running EM algorithm... 3%|█▌ | ETA: 0:00:21 ( 0.22 s/it) Running EM algorithm... 6%|███ | ETA: 0:00:12 ( 0.13 s/it) Running EM algorithm... 9%|████▌ | ETA: 0:00:09 ( 0.10 s/it) Running EM algorithm... 11%|█████▌ | ETA: 0:00:08 (93.80 ms/it) Running EM algorithm... 14%|███████ | ETA: 0:00:07 (82.85 ms/it) Running EM algorithm... 100%|██████████████████████████████████████████████████| Time: 0:00:01 (12.00 ms/it) Test Summary: | Pass Total Time Viterbi and Class Probability Tests | 37 37 17.7s Testing StateSpaceDynamics tests passed Testing completed after 717.19s PkgEval succeeded after 1532.07s