Package evaluation of MRIFiles on Julia 1.13.0-DEV.783 (b4a6288a38*) started at 2025-06-26T21:09:30.404 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.09s ################################################################################ # Installation # Installing MRIFiles... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [5a6f062f] + MRIFiles v0.3.2 Updating `~/.julia/environments/v1.13/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [7f219486] + AbstractNFFTs v0.8.2 [34da2185] + Compat v4.16.0 [7a1cc6ca] + FFTW v1.9.0 [5789e2e9] + FileIO v1.17.0 [f67ccb44] + HDF5 v0.17.2 [692b3bcd] + JLLWrappers v1.7.0 [9c8b4983] + LightXML v0.9.1 [3da0fdf6] + MPIPreferences v0.1.11 [f7771a9a] + MRIBase v0.4.4 [5a6f062f] + MRIFiles v0.3.2 [7424e34d] + NFFTTools v0.2.6 [21216c6a] + Preferences v1.4.3 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [f5851436] + FFTW_jll v3.3.11+0 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.1+0 [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [856f044c] + MKL_jll v2025.0.1+1 [7cb0a576] + MPICH_jll v4.3.1+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.8+0 ⌅ [02c8fc9c] + XML2_jll v2.13.6+1 [477f73a3] + libaec_jll v1.1.3+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.14.1+1 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.5.20 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.0+0 [efcefdf7] + PCRE2_jll v10.45.0+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 8.53s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 1466.9s ################################################################################ # Testing # Testing MRIFiles Status `/tmp/jl_EGF1wJ/Project.toml` [5789e2e9] FileIO v1.17.0 [f67ccb44] HDF5 v0.17.2 [8ad4436d] ImageUtils v0.2.12 [9c8b4983] LightXML v0.9.1 [f7771a9a] MRIBase v0.4.4 [c57eb701] MRICoilSensitivities v0.1.3 [5a6f062f] MRIFiles v0.3.2 [bdf86e05] MRIReco v0.9.0 [189a3867] Reexport v1.2.2 [6c6a2e73] Scratch v1.3.0 [4af54fe1] LazyArtifacts v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [de0858da] Printf v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_EGF1wJ/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [7f219486] AbstractNFFTs v0.8.2 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.19.0 ⌃ [13072b0f] AxisAlgorithms v1.0.1 [39de3d68] AxisArrays v0.4.7 [198e06fe] BangBang v0.4.4 [9718e550] Baselet v0.1.1 [26cce99e] 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v0.3.7 [80713f31] ImageSegmentation v1.9.0 [4e3cecfd] ImageShow v0.3.8 [02fcd773] ImageTransformations v0.10.2 [8ad4436d] ImageUtils v0.2.12 [916415d5] Images v0.26.2 [9b13fd28] IndirectArrays v1.0.0 [d25df0c9] Inflate v0.1.5 [22cec73e] InitialValues v0.3.1 [1d092043] IntegralArrays v0.1.6 ⌅ [a98d9a8b] Interpolations v0.14.0 [8197267c] IntervalSets v0.7.11 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.4 [c8e1da08] IterTools v1.10.0 [42fd0dbc] IterativeSolvers v0.9.4 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.5.15 [692b3bcd] JLLWrappers v1.7.0 [b835a17e] JpegTurbo v0.1.6 [b14d175d] JuliaVariables v0.2.4 [10f19ff3] LayoutPointers v0.1.17 [8cdb02fc] LazyModules v0.3.1 [9c8b4983] LightXML v0.9.1 [a4a2c56f] LinearOperatorCollection v2.1.0 [5c8ed15e] LinearOperators v2.10.0 [2ab3a3ac] LogExpFunctions v0.3.29 [bdcacae8] LoopVectorization v0.12.172 [898213cb] LowRankApprox v0.5.5 [e65ccdef] LowRankMatrices v1.0.2 [d8e11817] MLStyle v0.4.17 [3da0fdf6] MPIPreferences v0.1.11 [f7771a9a] MRIBase v0.4.4 [c57eb701] MRICoilSensitivities v0.1.3 [5a6f062f] MRIFiles v0.3.2 [fb1137e3] MRIOperators v0.3.0 [bdf86e05] MRIReco v0.9.0 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [dbb5928d] MappedArrays v0.4.2 [c03570c3] Memoize v0.4.4 [626554b9] MetaGraphs v0.8.0 [128add7d] MicroCollections v0.2.0 [e1d29d7a] Missings v1.2.0 [e94cdb99] MosaicViews v0.3.4 [efe261a4] NFFT v0.13.7 [7424e34d] NFFTTools v0.2.6 [a3a9e032] NIfTI v0.6.1 [77ba4419] NaNMath v1.1.3 [71a1bf82] NameResolution v0.1.5 [b8a86587] NearestNeighbors v0.4.21 [f09324ee] Netpbm v1.1.1 [4d1e1d77] Nullables v1.0.0 [6fe1bfb0] OffsetArrays v1.17.0 [52e1d378] OpenEXR v0.3.3 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.35 [f57f5aa1] PNGFiles v0.4.4 [5432bcbf] PaddedViews v0.5.12 [d96e819e] Parameters v0.12.3 [eebad327] PkgVersion v0.3.3 [1d0040c9] PolyesterWeave v0.2.2 [f27b6e38] Polynomials v4.1.0 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [8162dcfd] PrettyPrint v0.2.0 [92933f4c] ProgressMeter v1.10.4 [43287f4e] PtrArrays v1.3.0 [4b34888f] QOI v1.0.1 [1fd47b50] QuadGK v2.11.2 [94ee1d12] Quaternions v0.7.6 [b3c3ace0] RangeArrays v0.3.2 [c84ed2f1] Ratios v0.4.5 [c1ae055f] RealDot v0.1.0 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [dee08c22] RegionTrees v0.3.2 [1e9c538a] RegularizedLeastSquares v0.16.8 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.8.0 [f2b01f46] Roots v2.2.8 [6038ab10] Rotations v1.7.1 [fdea26ae] SIMD v3.7.1 [94e857df] SIMDTypes v0.1.0 [476501e8] SLEEFPirates v0.6.43 [7e506255] ScopedValues v1.3.0 [6c6a2e73] Scratch v1.3.0 [efcf1570] Setfield v1.1.2 [699a6c99] SimpleTraits v0.9.4 [47aef6b3] SimpleWeightedGraphs v1.5.0 [45858cf5] Sixel v0.1.4 [a2af1166] SortingAlgorithms v1.2.1 [276daf66] SpecialFunctions v2.5.1 [171d559e] SplittablesBase v0.1.15 [cae243ae] StackViews v0.1.2 [aedffcd0] Static v1.2.0 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.5 [4c63d2b9] StatsFuns v1.5.0 [88034a9c] StringDistances v0.11.3 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [62fd8b95] TensorCore v0.1.1 [5e47fb64] TestImages v1.9.0 [8290d209] ThreadingUtilities v0.5.5 [731e570b] TiffImages v0.11.4 [06e1c1a7] TiledIteration v0.5.0 [a759f4b9] TimerOutputs v0.5.29 ⌅ [3bb67fe8] TranscodingStreams v0.9.13 [28d57a85] Transducers v0.4.84 [3a884ed6] UnPack v1.0.2 [1986cc42] Unitful v1.23.1 [3d5dd08c] VectorizationBase v0.21.71 [29a6e085] Wavelets v0.10.1 [e3aaa7dc] WebP v0.1.3 ⌅ [efce3f68] WoodburyMatrices v0.5.6 [f5851436] FFTW_jll v3.3.11+0 [61579ee1] Ghostscript_jll v9.55.0+4 [59f7168a] Giflib_jll v5.2.3+0 [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.1+0 [c73af94c] ImageMagick_jll v7.1.1048+0 [905a6f67] Imath_jll v3.1.11+0 [1d5cc7b8] IntelOpenMP_jll v2025.0.4+0 [aacddb02] JpegTurbo_jll v3.1.1+0 ⌅ [88015f11] LERC_jll v3.0.0+1 [7e76a0d4] Libglvnd_jll v1.7.1+1 [94ce4f54] Libiconv_jll v1.18.0+0 ⌅ [89763e89] Libtiff_jll v4.5.1+1 [d3a379c0] LittleCMS_jll v2.16.0+0 [856f044c] MKL_jll v2025.0.1+1 [7cb0a576] MPICH_jll v4.3.1+0 [f1f71cc9] MPItrampoline_jll v5.5.4+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [18a262bb] OpenEXR_jll v3.2.4+0 [643b3616] OpenJpeg_jll v2.5.4+0 [fe0851c0] OpenMPI_jll v5.0.8+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 ⌅ [02c8fc9c] XML2_jll v2.13.6+1 [ffd25f8a] XZ_jll v5.8.1+0 [4f6342f7] Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] Xorg_libXau_jll v1.0.13+0 [a3789734] Xorg_libXdmcp_jll v1.1.6+0 [1082639a] Xorg_libXext_jll v1.3.7+0 [c7cfdc94] Xorg_libxcb_jll v1.17.1+0 [c5fb5394] Xorg_xtrans_jll v1.6.0+0 [477f73a3] libaec_jll v1.1.3+0 [b53b4c65] libpng_jll v1.6.49+0 [075b6546] libsixel_jll v1.10.5+0 ⌃ [c5f90fcd] libwebp_jll v1.4.0+0 [1317d2d5] oneTBB_jll v2022.0.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.14.1+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.5.20 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.0+0 [efcefdf7] PCRE2_jll v10.45.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling packages... 7367.1 ms ✓ Wavelets 4210.3 ms ✓ LinearOperatorCollection → LinearOperatorWaveletExt 64310.6 ms ✓ MRIOperators 21464.0 ms ✓ MRIReco 4 dependencies successfully precompiled in 99 seconds. 170 already precompiled. Precompiling packages... 1065.1 ms ✓ Roots → RootsChainRulesCoreExt 2894.5 ms ✓ ArnoldiMethod 1447.3 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 2435.9 ms ✓ CoordinateTransformations 1234.1 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 3122.5 ms ✓ NearestNeighbors 1394.9 ms ✓ RegionTrees 3847.5 ms ✓ Rotations 1274.4 ms ✓ Accessors → StaticArraysExt 4992.5 ms ✓ PNGFiles 2619.7 ms ✓ Polynomials → PolynomialsChainRulesCoreExt 4100.4 ms ✓ ImageAxes 35502.8 ms ✓ JLD2 7632.3 ms ✓ JpegTurbo 4231.6 ms ✓ QOI 7256.6 ms ✓ Sixel 4299.7 ms ✓ OpenEXR 41805.8 ms ✓ TiffImages 4432.3 ms ✓ ImageBinarization 6049.0 ms ✓ WebP 74435.2 ms ✓ ImageFiltering 8057.5 ms ✓ Graphs 4264.4 ms ✓ Interpolations 4316.5 ms ✓ Clustering 1700.1 ms ✓ Rotations → RotationsRecipesBaseExt 3429.9 ms ✓ ImageMetadata 5121.8 ms ✓ JLD2 → UnPackExt 21204.0 ms ✓ ImageCorners 3166.8 ms ✓ SimpleWeightedGraphs 7046.9 ms ✓ MetaGraphs 4883.6 ms ✓ ImageTransformations 6521.1 ms ✓ Netpbm 16608.1 ms ✓ ImageSegmentation 5712.4 ms ✓ ImageContrastAdjustment 19550.0 ms ✓ ImageQualityIndexes 22534.3 ms ✓ Images 31729.2 ms ✓ ImageUtils 37 dependencies successfully precompiled in 383 seconds. 209 already precompiled. 1 dependency had output during precompilation: ┌ Interpolations │ WARNING: method definition for checkbounds at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/Interpolations.jl:454 declares type variable N but does not use it. │ WARNING: method definition for checkbounds at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/Interpolations.jl:457 declares type variable N but does not use it. │ WARNING: method definition for GriddedInterpolation at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/gridded/gridded.jl:37 declares type variable pad but does not use it. │ WARNING: method definition for GriddedInterpolation at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/gridded/gridded.jl:60 declares type variable pad but does not use it. │ WARNING: method definition for interpolate! at /home/pkgeval/.julia/packages/Interpolations/USkTk/src/deprecations.jl:30 declares type variable TWeights but does not use it. └ Precompiling packages... 3959.2 ms ✓ DSP → OffsetArraysExt 1 dependency successfully precompiled in 4 seconds. 63 already precompiled. Precompiling packages... 1838.9 ms ✓ BangBang → BangBangStaticArraysExt 1 dependency successfully precompiled in 2 seconds. 21 already precompiled. Precompiling packages... 3937.8 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 1 dependency successfully precompiled in 4 seconds. 23 already precompiled. Precompiling packages... 4755.8 ms ✓ Distributions → DistributionsChainRulesCoreExt 1 dependency successfully precompiled in 6 seconds. 52 already precompiled. Precompiling packages... 5787.3 ms ✓ LoopVectorization → SpecialFunctionsExt 1 dependency successfully precompiled in 6 seconds. 50 already precompiled. [ Info: The test data is located at /home/pkgeval/.julia/artifacts/4a7a5048b08057bc2e03c69b78296a2eb04edfdd. [ Info: If you want to check the output of the tests, please head to /home/pkgeval/.julia/scratchspaces/00000000-0000-0000-0000-000000000000/tmp. ┌ Info: Read parameters timing │ t1 = 4.488607308 └ t2 = 1.5729e-5 ┌ Warning: 1st half of image are the REAL part and 2nd half is the imaginary └ @ MRIFiles ~/.julia/packages/MRIFiles/9hXgx/src/Bruker/Bruker.jl:424 [ Info: Bruker protocol name : T2_RARE Direct Reconstruction... 13%|███▋ | ETA: 0:01:19 Direct Reconstruction... 100%|███████████████████████████| Time: 0:00:12 [ Info: Bruker protocol name : FLASH [ Info: Bruker protocol name : FLASH Direct Reconstruction... 50%|█████████████▌ | ETA: 0:00:05 Direct Reconstruction... 100%|███████████████████████████| Time: 0:00:05 [ Info: Bruker protocol name : FLASH [ Info: read offset not performed (only phase + slice) [ Info: Reconstruction of 3DUTE [ Info: Bruker protocol name : UTE3D ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 511 running 1 of 1 signal (10): User defined signal 1 gc_mark_objarray at /source/src/gc-stock.c:1811 gc_mark_outrefs at /source/src/gc-stock.c:2417 [inlined] gc_mark_loop_serial_ at /source/src/gc-stock.c:2524 gc_mark_loop_serial at /source/src/gc-stock.c:2547 gc_mark_loop at /source/src/gc-stock.c:2735 [inlined] _jl_gc_collect at /source/src/gc-stock.c:3080 ijl_gc_collect at /source/src/gc-stock.c:3489 maybe_collect at /source/src/gc-stock.c:349 [inlined] jl_gc_small_alloc_inner at /source/src/gc-stock.c:725 ijl_gc_small_alloc at /source/src/gc-stock.c:774 macro expansion at /home/pkgeval/.julia/packages/NFFT/WB6HI/src/precomputation.jl:547 [inlined] macro expansion at /home/pkgeval/.julia/packages/NFFT/WB6HI/src/utils.jl:10 [inlined] _precomputeIdxInBlock at /home/pkgeval/.julia/packages/NFFT/WB6HI/src/precomputation.jl:530 unknown function (ip: 0x77c472d2877b) at (unknown file) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 precomputeBlocks at /home/pkgeval/.julia/packages/NFFT/WB6HI/src/precomputation.jl:467 #NFFTPlan#12 at /home/pkgeval/.julia/packages/NFFT/WB6HI/src/implementation.jl:95 NFFTPlan at /home/pkgeval/.julia/packages/NFFT/WB6HI/src/implementation.jl:73 [inlined] macro expansion at /home/pkgeval/.julia/packages/NFFT/WB6HI/src/NFFT.jl:49 [inlined] macro expansion at ./timing.jl:461 [inlined] #plan_nfft#71 at /home/pkgeval/.julia/packages/NFFT/WB6HI/src/NFFT.jl:48 [inlined] plan_nfft at /home/pkgeval/.julia/packages/NFFT/WB6HI/src/NFFT.jl:46 [inlined] #NFFTOpImpl#2 at /home/pkgeval/.julia/packages/LinearOperatorCollection/qbON0/ext/LinearOperatorNFFTExt/NFFTOp.jl:45 unknown function (ip: 0x77c472d1ca75) at (unknown file) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 NFFTOpImpl at /home/pkgeval/.julia/packages/LinearOperatorCollection/qbON0/ext/LinearOperatorNFFTExt/NFFTOp.jl:42 #NFFTOp#1 at /home/pkgeval/.julia/packages/LinearOperatorCollection/qbON0/ext/LinearOperatorNFFTExt/NFFTOp.jl:5 [inlined] NFFTOp at /home/pkgeval/.julia/packages/LinearOperatorCollection/qbON0/ext/LinearOperatorNFFTExt/NFFTOp.jl:2 unknown function (ip: 0x77c472d0f641) at (unknown file) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 #fourierEncodingOp#100 at /home/pkgeval/.julia/packages/MRIOperators/lFVID/src/EncodingOp.jl:165 fourierEncodingOp at /home/pkgeval/.julia/packages/MRIOperators/lFVID/src/EncodingOp.jl:140 [inlined] #79 at ./none (unknown line) [inlined] iterate at ./generator.jl:48 [inlined] collect at ./array.jl:796 #encodingOps_simple#74 at /home/pkgeval/.julia/packages/MRIOperators/lFVID/src/EncodingOp.jl:19 encodingOps_simple at /home/pkgeval/.julia/packages/MRIOperators/lFVID/src/EncodingOp.jl:15 unknown function (ip: 0x77c481583674) at (unknown file) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 reconstruction_direct at /home/pkgeval/.julia/packages/MRIReco/9MaIr/src/Reconstruction/DirectReconstruction.jl:31 unknown function (ip: 0x77c481581bbe) at (unknown file) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 reconstruction at /home/pkgeval/.julia/packages/MRIReco/9MaIr/src/Reconstruction/Reconstruction.jl:40 unknown function (ip: 0x77c4815553a6) at (unknown file) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 macro expansion at /home/pkgeval/.julia/packages/MRIFiles/9hXgx/test/testBrukerFile.jl:129 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.13/Test/src/Test.jl:1855 [inlined] macro expansion at /home/pkgeval/.julia/packages/MRIFiles/9hXgx/test/testBrukerFile.jl:47 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.13/Test/src/Test.jl:1855 [inlined] top-level scope at /home/pkgeval/.julia/packages/MRIFiles/9hXgx/test/testBrukerFile.jl:3 _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_invoke at /source/src/gf.c:3699 jl_toplevel_eval_flex at /source/src/toplevel.c:762 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2846 _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 _include at ./loading.jl:2906 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_28212.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2343 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2846 _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 _include at ./loading.jl:2906 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_28212.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2343 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 exec_options at ./client.jl:290 _start at ./client.jl:557 jfptr__start_72738.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2343 [inlined] true_main at /source/src/jlapi.c:964 jl_repl_entrypoint at /source/src/jlapi.c:1132 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x77c4970c4249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1213 wait_forever at ./task.jl:1150 jfptr_wait_forever_64784.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2343 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000075dbdca02860 Total snapshots: 407. Utilization: 0% ╎407 @Base/task.jl:1150 wait_forever() 406╎ 407 @Base/task.jl:1213 wait() [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 [511] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/MRIFiles/9hXgx/test/testBrukerFile.jl:1 wait at ./task.jl:1213 _ZN4llvm5APIntC2Ejmbb.constprop.0 at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) unknown function (ip: 0x7fff7d280df7) at (unknown file) unknown function (ip: (nil)) at (unknown file) Allocations: 798486593 (Pool: 798483712; Big: 2881); GC: 153 wait_forever at ./task.jl:1150 jfptr_wait_forever_64784.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2343 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 23295201 (Pool: 23294645; Big: 556); GC: 28 PkgEval terminated after 2723.79s: test duration exceeded the time limit