Package evaluation of Groebner on Julia 1.13.0-DEV.783 (b4a6288a38*) started at 2025-06-26T19:36:40.247 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 7.75s ################################################################################ # Installation # Installing Groebner... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [0b43b601] + Groebner v0.9.4 Updating `~/.julia/environments/v1.13/Manifest.toml` ⌅ [c3fe647b] + AbstractAlgebra v0.44.13 [a9b6321e] + Atomix v1.1.1 [861a8166] + Combinatorics v1.0.3 [0b43b601] + Groebner v0.9.4 [18e54dd8] + IntegerMathUtils v0.1.2 [692b3bcd] + JLLWrappers v1.7.0 [1914dd2f] + MacroTools v0.5.16 ⌅ [2edaba10] + Nemo v0.49.5 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [27ebfcd6] + Primes v0.5.7 [fb686558] + RandomExtensions v0.4.4 [013be700] + UnsafeAtomics v0.3.0 ⌅ [e134572f] + FLINT_jll v300.200.201+0 [656ef2d0] + OpenBLAS32_jll v0.3.29+0 [56f22d72] + Artifacts v1.11.0 [ade2ca70] + Dates v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.12.0 [fa267f1f] + TOML v1.0.3 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [781609d7] + GMP_jll v6.3.0+2 [3a97d323] + MPFR_jll v4.2.2+0 [4536629a] + OpenBLAS_jll v0.3.29+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.13.1+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 3.67s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 144.8s ################################################################################ # Testing # Testing Groebner Status `/tmp/jl_HsYCpI/Project.toml` ⌅ [c3fe647b] AbstractAlgebra v0.44.13 [a9b6321e] Atomix v1.1.1 [6e4b80f9] BenchmarkTools v1.6.0 [861a8166] Combinatorics v1.0.3 [7c1d4256] DynamicPolynomials v0.6.2 [0b43b601] Groebner v0.9.4 ⌅ [2edaba10] Nemo v0.49.5 [aea7be01] PrecompileTools v1.3.2 [27ebfcd6] Primes v0.5.7 [b77e0a4c] InteractiveUtils v1.11.0 [56ddb016] Logging v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_HsYCpI/Manifest.toml` ⌅ [c3fe647b] AbstractAlgebra v0.44.13 [a9b6321e] Atomix v1.1.1 [6e4b80f9] BenchmarkTools v1.6.0 [d360d2e6] ChainRulesCore v1.25.2 [861a8166] Combinatorics v1.0.3 [34da2185] Compat v4.16.0 [864edb3b] DataStructures v0.18.22 [7c1d4256] DynamicPolynomials v0.6.2 [0b43b601] Groebner v0.9.4 [18e54dd8] IntegerMathUtils v0.1.2 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [1914dd2f] MacroTools v0.5.16 [102ac46a] MultivariatePolynomials v0.5.9 [d8a4904e] MutableArithmetics v1.6.4 ⌅ [2edaba10] Nemo v0.49.5 [bac558e1] OrderedCollections v1.8.1 [69de0a69] Parsers v2.8.3 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [27ebfcd6] Primes v0.5.7 [fb686558] RandomExtensions v0.4.4 [189a3867] Reexport v1.2.2 [10745b16] Statistics v1.11.1 [013be700] UnsafeAtomics v0.3.0 ⌅ [e134572f] FLINT_jll v300.200.201+0 [656ef2d0] OpenBLAS32_jll v0.3.29+0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [de0858da] Printf v1.11.0 [9abbd945] Profile v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [781609d7] GMP_jll v6.3.0+2 [3a97d323] MPFR_jll v4.2.2+0 [4536629a] OpenBLAS_jll v0.3.29+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [8e850b90] libblastrampoline_jll v5.13.1+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... WARNING: Method definition invariants_enabled() in module Groebner at /home/pkgeval/.julia/packages/Groebner/FT1eI/src/Groebner.jl:28 overwritten at /home/pkgeval/.julia/packages/Groebner/FT1eI/test/runtests.jl:5. Julia Version 1.13.0-DEV.783 Commit b4a6288a38* (2025-06-26 02:46 UTC) Platform Info: OS: Linux (x86_64-linux-gnu) CPU: 128 × AMD EPYC 7502 32-Core Processor WORD_SIZE: 64 LLVM: libLLVM-20.1.2 (ORCJIT, znver2) GC: Built with stock GC Threads: 1 default, 0 interactive, 1 GC (on 1 virtual cores) Environment: JULIA_CPU_THREADS = 1 JULIA_NUM_PRECOMPILE_TASKS = 1 JULIA_PKG_PRECOMPILE_AUTO = 0 JULIA_PKGEVAL = true JULIA_DEPOT_PATH = /home/pkgeval/.julia:/usr/local/share/julia: JULIA_NUM_THREADS = 1 JULIA_LOAD_PATH = @:/tmp/jl_HsYCpI [ Info: Running arithmetic.jl 5.661968 seconds (4.52 M allocations: 233.884 MiB, 1.51% gc time, 95.82% compilation time: <1% of which was recompilation) [ Info: Running crt.jl 0.856706 seconds (584.53 k allocations: 30.380 MiB, 97.88% compilation time) [ Info: Running monoms/exponentvector.jl 2.114663 seconds (1.57 M allocations: 85.108 MiB, 1.21% gc time, 98.54% compilation time) [ Info: Running monoms/packedtuples.jl 4.427184 seconds (3.09 M allocations: 163.543 MiB, 0.98% gc time, 96.68% compilation time: 4% of which was recompilation) [ Info: Running monoms/monom_arithmetic.jl 6.722188 seconds (2.86 M allocations: 152.782 MiB, 0.80% gc time, 98.03% compilation time: <1% of which was recompilation) [ Info: Running monoms/monom_orders.jl 24.065282 seconds (15.00 M allocations: 797.264 MiB, 0.98% gc time, 99.13% compilation time) [ Info: Running groebner.jl ┌ Warning: Groebner.jl does not have a native implementation for the given field: Finite field F_10715086071862673209484250490600018105614048117055336074437503883703510511249361224931983788156958581275946729175531468251871452856923140435984577574698574803934567774824230985421074605062371141877954182153046474983581941267398767559165543946077062914571196477686542167660429831652624386837205668069673. │ Falling back to a generic implementation (may be slow). │ If this is unexpected, please consider submitting a GitHub issue. └ @ Groebner ~/.julia/packages/Groebner/FT1eI/src/input_output/AbstractAlgebra.jl:86 ┌ Info: Possible overflow of exponent vector detected. └ Restarting with at least 32 bits per exponent. ┌ Info: Possible overflow of exponent vector detected. └ Restarting with at least 32 bits per exponent. ┌ Info: Possible overflow of exponent vector detected. └ Restarting with at least 32 bits per exponent. groebner orderings: Error During Test at /home/pkgeval/.julia/packages/Groebner/FT1eI/test/groebner.jl:558 Got exception outside of a @test UndefVarError: `__R` not defined in `Main.var"##groebner.#284"` The binding may be too new: running in world age 39064, while current world is 39065. Stacktrace: [1] top-level scope @ ~/.julia/packages/Groebner/FT1eI/test/groebner.jl:559 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1855 [inlined] [3] macro expansion @ ~/.julia/packages/Groebner/FT1eI/test/groebner.jl:662 [inlined] [4] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [5] top-level scope @ ~/.julia/packages/Groebner/FT1eI/test/runtests.jl:34 [6] eval(m::Module, e::Any) @ Core ./boot.jl:489 [7] macro expansion @ ./timing.jl:645 [inlined] [8] isolated_testset(name::String) @ Main ~/.julia/packages/Groebner/FT1eI/test/runtests.jl:33 [9] macro expansion @ ~/.julia/packages/Groebner/FT1eI/test/runtests.jl:50 [inlined] [10] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1855 [inlined] [11] macro expansion @ ~/.julia/packages/Groebner/FT1eI/test/runtests.jl:41 [inlined] [12] macro expansion @ ./timing.jl:645 [inlined] [13] top-level scope @ ~/.julia/packages/Groebner/FT1eI/test/runtests.jl:353 [14] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [15] top-level scope @ none:6 [16] eval(m::Module, e::Any) @ Core ./boot.jl:489 [17] exec_options(opts::Base.JLOptions) @ Base ./client.jl:290 [18] _start() @ Base ./client.jl:557 [ Info: GB contains polynomials of lengths: [557, 6747, 9152, 12290, 16128, 21118, 24740, 26746, 32104, 33315, 35690, 39603, 39797, 40639, 44679, 49145, 49295, 50621, 50745, 55964, 57165, 59035, 60795, 65522, 65943, 66565, 73846, 77706, 96383, 113933] [ Info: Variables: 64 [ Info: Variables: 100 [ Info: Variables: 101 [ Info: Variables: 127 [ Info: Variables: 128 [ Info: Variables: 256 [ Info: Variables: 257 ┌ Info: Possible overflow of exponent vector detected. └ Restarting with at least 32 bits per exponent. [ Info: Testing multi-threading over Zp using 1 threads [ Info: Testing multi-threading over QQ using 1 threads [ Info: Producing 15552 small random tests for groebner. This may take a minute 2458.775329 seconds (984.29 M allocations: 63.754 GiB, 1.12% gc time, 96.02% compilation time) [ Info: Running learn_and_apply.jl Recorded 1 traces. Showing only one. # Trace of F4 recorded in 0.0 s (0.02 MiB). ring : Z[x1,...,x2] mod 2147483647 input : 2 polynomials output: 2 polynomials apply : 1 / 0 (success/fail) # Parameters input order : DegRevLex() output order : DegRevLex() homogenize : false permute : false monom. type : Groebner.PackedTuple1{UInt64, UInt8} coeff. type : UInt32 arithmetic : Groebner.SpecializedArithmeticZp{UInt64, UInt32, true} # F4 statistics iterations : 1 hashtable : 4 / 1024 filled matrix up-rows : 2 (100.0 % useful) matrix low-rows: 0 (NaN % useful) pair degrees : pair count : ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 23 running 1 of 1 signal (10): User defined signal 1 _ZN12_GLOBAL__N_111DAGCombiner7combineEPN4llvm6SDNodeE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm12SelectionDAG7CombineENS_12CombineLevelEPNS_14BatchAAResultsENS_15CodeGenOptLevelE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm16SelectionDAGISel17CodeGenAndEmitDAGEv at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm16SelectionDAGISel20SelectAllBasicBlocksERKNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm16SelectionDAGISel20runOnMachineFunctionERNS_15MachineFunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm22SelectionDAGISelLegacy20runOnMachineFunctionERNS_15MachineFunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm19MachineFunctionPass13runOnFunctionERNS_8FunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm13FPPassManager13runOnFunctionERNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm13FPPassManager11runOnModuleERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm6legacy15PassManagerImpl3runERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm3orc14SimpleCompilerclERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) operator() at /source/src/jitlayers.cpp:1620 addModule at /source/src/jitlayers.cpp:2101 jl_compile_codeinst_now at /source/src/jitlayers.cpp:683 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:883 jl_compile_method_internal at /source/src/gf.c:3212 _jl_invoke at /source/src/gf.c:3684 [inlined] ijl_apply_generic at /source/src/gf.c:3892 __groebner1 at /home/pkgeval/.julia/packages/Groebner/FT1eI/src/groebner/groebner.jl:57 unknown function (ip: 0x7b9157bb4cf6) at (unknown file) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 _groebner1 at /home/pkgeval/.julia/packages/Groebner/FT1eI/src/groebner/groebner.jl:34 unknown function (ip: 0x7b9157baef40) at (unknown file) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 groebner0 at /home/pkgeval/.julia/packages/Groebner/FT1eI/src/groebner/groebner.jl:10 #groebner#172 at /home/pkgeval/.julia/packages/Groebner/FT1eI/src/interface.jl:111 [inlined] groebner at /home/pkgeval/.julia/packages/Groebner/FT1eI/src/interface.jl:109 unknown function (ip: 0x7b9157b9d4f2) at (unknown file) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2343 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_body at /source/src/interpreter.c:581 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2846 _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 _include at ./loading.jl:2906 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_28212.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2343 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_eval_module_expr at /source/src/toplevel.c:196 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:658 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 macro expansion at ./timing.jl:645 [inlined] isolated_testset at /home/pkgeval/.julia/packages/Groebner/FT1eI/test/runtests.jl:33 unknown function (ip: 0x7b915ed48392) at (unknown file) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 macro expansion at /home/pkgeval/.julia/packages/Groebner/FT1eI/test/runtests.jl:51 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.13/Test/src/Test.jl:1855 [inlined] macro expansion at /home/pkgeval/.julia/packages/Groebner/FT1eI/test/runtests.jl:41 [inlined] macro expansion at ./timing.jl:645 [inlined] top-level scope at /home/pkgeval/.julia/packages/Groebner/FT1eI/test/runtests.jl:353 _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_invoke at /source/src/gf.c:3699 jl_toplevel_eval_flex at /source/src/toplevel.c:762 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2846 _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 _include at ./loading.jl:2906 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_28212.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2343 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 exec_options at ./client.jl:290 _start at ./client.jl:557 jfptr__start_72738.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2343 [inlined] true_main at /source/src/jlapi.c:964 jl_repl_entrypoint at /source/src/jlapi.c:1132 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7b9173c31249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1213 wait_forever at ./task.jl:1150 jfptr_wait_forever_64784.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2343 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007e9d15402860 Total snapshots: 471. Utilization: 0% ╎471 @Base/task.jl:1150 wait_forever() 470╎ 471 @Base/task.jl:1213 wait() [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 [23] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/Groebner/FT1eI/test/learn_and_apply.jl:67 wait at ./task.jl:1213 wait_forever at ./task.jl:1150 jfptr_wait_forever_64784.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2343 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 18395459 (Pool: 18394981; Big: 478); GC: 18 PkgEval terminated after 2743.01s: test duration exceeded the time limit