Package evaluation of StateSpaceDynamics on Julia 1.13.0-DEV.759 (3bb7518b04*) started at 2025-06-19T20:24:32.275 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.99s ################################################################################ # Installation # Installing StateSpaceDynamics... Resolving package versions... Installed Adapt ──────────────────── v4.3.0 Installed ForwardDiff ────────────── v0.10.38 Installed DiffResults ────────────── v1.1.0 Installed MacroTools ─────────────── v0.5.16 Installed ConstructionBase ───────── v1.6.0 Installed Rmath_jll ──────────────── v0.5.1+0 Installed OrderedCollections ─────── v1.8.1 Installed AliasTables ────────────── v1.1.3 Installed HypergeometricFunctions ── v0.3.28 Installed DataStructures ─────────── v0.18.22 Installed FillArrays ─────────────── v1.13.0 Installed StatsBase ──────────────── v0.34.5 Installed Optim ──────────────────── v1.13.2 Installed ArrayInterface ─────────── v7.19.0 Installed DataAPI ────────────────── v1.16.0 Installed Compat ─────────────────── v4.16.0 Installed PositiveFactorizations ─── v0.2.4 Installed StatsAPI ───────────────── v1.7.1 Installed Statistics ─────────────── v1.11.1 Installed CommonSubexpressions ───── v0.3.1 Installed PrecompileTools ────────── v1.3.2 Installed ProgressMeter ──────────── v1.10.4 Installed NaNMath ────────────────── v1.1.3 Installed IrrationalConstants ────── v0.2.4 Installed Requires ───────────────── v1.3.1 Installed StaticArraysCore ───────── v1.4.3 Installed ArrayLayouts ───────────── v1.11.1 Installed QuadGK ─────────────────── v2.11.2 Installed StaticArrays ───────────── v1.9.13 Installed OpenSpecFun_jll ────────── v0.5.6+0 Installed LogExpFunctions ────────── v0.3.29 Installed DiffRules ──────────────── v1.15.1 Installed StatsFuns ──────────────── v1.5.0 Installed Parameters ─────────────── v0.12.3 Installed FiniteDiff ─────────────── v2.27.0 Installed EnumX ──────────────────── v1.0.5 Installed Reexport ───────────────── v1.2.2 Installed NLSolversBase ──────────── v7.10.0 Installed Rmath ──────────────────── v0.8.0 Installed PtrArrays ──────────────── v1.3.0 Installed Setfield ───────────────── v1.1.2 Installed SpecialFunctions ───────── v2.5.1 Installed Distributions ──────────── v0.25.120 Installed Missings ───────────────── v1.2.0 Installed JLLWrappers ────────────── v1.7.0 Installed PDMats ─────────────────── v0.11.35 Installed LineSearches ───────────── v7.4.0 Installed Preferences ────────────── v1.4.3 Installed UnPack ─────────────────── v1.0.2 Installed SortingAlgorithms ──────── v1.2.1 Installed ADTypes ────────────────── v1.14.0 Installed DocStringExtensions ────── v0.9.5 Installed DifferentiationInterface ─ v0.7.1 Installed StateSpaceDynamics ─────── v0.1.1 Installing 2 artifacts Installed artifact OpenSpecFun 194.9 KiB Installed artifact Rmath 121.9 KiB Updating `~/.julia/environments/v1.13/Project.toml` [19cf8126] + StateSpaceDynamics v0.1.1 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.14.0 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.19.0 [4c555306] + ArrayLayouts v1.11.1 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.16.0 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.1 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 ⌅ [f6369f11] + ForwardDiff v0.10.38 [34004b35] + HypergeometricFunctions v0.3.28 [92d709cd] + IrrationalConstants v0.2.4 [692b3bcd] + JLLWrappers v1.7.0 [d3d80556] + LineSearches v7.4.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [429524aa] + Optim v1.13.2 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [d96e819e] + Parameters v0.12.3 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [92933f4c] + ProgressMeter v1.10.4 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.1 [19cf8126] + StateSpaceDynamics v0.1.1 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.5 [4c63d2b9] + StatsFuns v1.5.0 [3a884ed6] + UnPack v1.0.2 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.12.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building StateSpaceDynamics → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/0ec6b0fe096ace18afbae1bd8cfc34fe6bef7436/build.log` Installation completed after 11.65s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 5192.1 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 25 already precompiled. Precompiling package dependencies... Precompilation completed after 621.07s ################################################################################ # Testing # Testing StateSpaceDynamics Status `/tmp/jl_vQUoen/Project.toml` [4c88cf16] Aqua v0.8.13 [336ed68f] CSV v0.10.15 [a2441757] Coverage v1.6.1 [a93c6f00] DataFrames v1.7.0 [31c24e10] Distributions v0.25.120 ⌅ [f6369f11] ForwardDiff v0.10.38 [98e50ef6] JuliaFormatter v2.1.2 [23992714] MAT v0.10.7 [429524aa] Optim v1.13.2 [276daf66] SpecialFunctions v2.5.1 [19cf8126] StateSpaceDynamics v0.1.1 [4c63d2b9] StatsFuns v1.5.0 [37e2e46d] LinearAlgebra v1.12.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_vQUoen/Manifest.toml` [47edcb42] ADTypes v1.14.0 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [4c88cf16] Aqua v0.8.13 [4fba245c] ArrayInterface v7.19.0 [4c555306] ArrayLayouts v1.11.1 [d1d4a3ce] BitFlags v0.1.9 [e1450e63] BufferedStreams v1.2.2 [336ed68f] CSV v0.10.15 [944b1d66] CodecZlib v0.7.8 [a80b9123] CommonMark v0.9.1 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.16.0 [f0e56b4a] ConcurrentUtilities v2.5.0 [187b0558] ConstructionBase v1.6.0 [a2441757] Coverage v1.6.1 [c36e975a] CoverageTools v1.3.2 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.7.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.1 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.5 [460bff9d] ExceptionUnwrapping v0.1.11 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.13.0 [6a86dc24] FiniteDiff v2.27.0 ⌅ [f6369f11] ForwardDiff v0.10.38 [c27321d9] Glob v1.3.1 [f67ccb44] HDF5 v0.17.2 [cd3eb016] HTTP v1.10.17 [34004b35] HypergeometricFunctions v0.3.28 [842dd82b] InlineStrings v1.4.4 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.4 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.0 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v2025.5.20 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.12.0+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Test Summary: | Pass Total Time Package Wide Tests | 11 11 1m24.5s Test Summary: | Pass Total Time SLDS Tests | 4062 4062 1m55.3s Fitting LDS via EM... 6%|███ | ETA: 0:00:02 (26.20 ms/it) Fitting LDS via EM... 81%|████████████████████████████████████████▌ | ETA: 0:00:00 (10.63 ms/it) Fitting LDS via EM... 96%|████████████████████████████████████████████████ | ETA: 0:00:00 (10.07 ms/it) Fitting LDS via EM... 100%|██████████████████████████████████████████████████| Time: 0:00:00 ( 9.95 ms/it) Fitting LDS via EM... 5%|██▌ | ETA: 0:00:02 (20.80 ms/it) Fitting LDS via EM... 10%|█████ | ETA: 0:00:02 (24.96 ms/it) Fitting LDS via EM... 15%|███████▌ | ETA: 0:00:02 (23.34 ms/it) Fitting LDS via EM... 21%|██████████▌ | ETA: 0:00:02 (22.36 ms/it) Fitting LDS via EM... 26%|█████████████ | ETA: 0:00:02 (21.98 ms/it) Fitting LDS via EM... 31%|███████████████▌ | ETA: 0:00:02 (22.89 ms/it) Fitting LDS via EM... 37%|██████████████████▌ | ETA: 0:00:01 (22.46 ms/it) Fitting LDS via EM... 42%|█████████████████████ | ETA: 0:00:01 (22.18 ms/it) Fitting LDS via EM... 47%|███████████████████████▌ | ETA: 0:00:01 (22.56 ms/it) Fitting LDS via EM... 52%|██████████████████████████ | ETA: 0:00:01 (22.37 ms/it) Fitting LDS via EM... 57%|████████████████████████████▌ | ETA: 0:00:01 (22.18 ms/it) Fitting LDS via EM... 62%|███████████████████████████████ | ETA: 0:00:01 (22.07 ms/it) Fitting LDS via EM... 67%|█████████████████████████████████▌ | ETA: 0:00:01 (22.27 ms/it) Fitting LDS via EM... 73%|████████████████████████████████████▌ | ETA: 0:00:01 (22.06 ms/it) Fitting LDS via EM... 78%|███████████████████████████████████████ | ETA: 0:00:00 (21.96 ms/it) Fitting LDS via EM... 83%|█████████████████████████████████████████▌ | ETA: 0:00:00 (22.09 ms/it) Fitting LDS via EM... 89%|████████████████████████████████████████████▌ | ETA: 0:00:00 (21.96 ms/it) Fitting LDS via EM... 94%|███████████████████████████████████████████████ | ETA: 0:00:00 (21.87 ms/it) Fitting LDS via EM... 99%|█████████████████████████████████████████████████▌| ETA: 0:00:00 (21.82 ms/it) Fitting LDS via EM... 100%|██████████████████████████████████████████████████| Time: 0:00:02 (22.05 ms/it) Test Summary: | Pass Total Time GaussianLDS Tests | 66 66 2m00.3s WARNING: Method definition test_Gradient() in module Main at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/GaussianLDS.jl:78 overwritten at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/PoissonLDS.jl:68. WARNING: Method definition test_Hessian() in module Main at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/GaussianLDS.jl:94 overwritten at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/PoissonLDS.jl:84. WARNING: Method definition test_smooth() in module Main at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/GaussianLDS.jl:117 overwritten at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/PoissonLDS.jl:109. WARNING: Method definition test_initial_observation_parameter_updates() in module Main at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/GaussianLDS.jl:158 overwritten at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/PoissonLDS.jl:161. WARNING: Method definition test_initial_observation_parameter_updates(Int64) in module Main at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/GaussianLDS.jl:158 overwritten at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/PoissonLDS.jl:161. WARNING: Method definition test_state_model_parameter_updates() in module Main at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/GaussianLDS.jl:195 overwritten at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/PoissonLDS.jl:198. WARNING: Method definition test_state_model_parameter_updates(Int64) in module Main at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/GaussianLDS.jl:195 overwritten at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/PoissonLDS.jl:198. WARNING: Method definition test_EM() in module Main at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/GaussianLDS.jl:285 overwritten at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/PoissonLDS.jl:237. WARNING: Method definition test_EM(Int64) in module Main at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/GaussianLDS.jl:285 overwritten at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/LinearDynamicalSystems/PoissonLDS.jl:237. Fitting Poisson LDS via LaPlaceEM... 2%|█ | ETA: 0:00:19 ( 0.19 s/it) Fitting Poisson LDS via LaPlaceEM... 6%|███ | ETA: 0:00:08 (85.21 ms/it) Fitting Poisson LDS via LaPlaceEM... 10%|█████ | ETA: 0:00:06 (64.22 ms/it) Fitting Poisson LDS via LaPlaceEM... 12%|██████ | ETA: 0:00:05 (62.07 ms/it) Fitting Poisson LDS via LaPlaceEM... 16%|████████ | ETA: 0:00:05 (53.84 ms/it) Fitting Poisson LDS via LaPlaceEM... 20%|██████████ | ETA: 0:00:04 (49.15 ms/it) Fitting Poisson LDS via LaPlaceEM... 23%|███████████▌ | ETA: 0:00:04 (48.01 ms/it) Fitting Poisson LDS via LaPlaceEM... 27%|█████████████▌ | ETA: 0:00:03 (45.62 ms/it) Fitting Poisson LDS via LaPlaceEM... 30%|███████████████ | ETA: 0:00:03 (44.68 ms/it) Fitting Poisson LDS via LaPlaceEM... 34%|█████████████████ | ETA: 0:00:03 (42.90 ms/it) Fitting Poisson LDS via LaPlaceEM... 38%|███████████████████ | ETA: 0:00:03 (41.61 ms/it) Fitting Poisson LDS via LaPlaceEM... 41%|████████████████████▌ | ETA: 0:00:02 (41.24 ms/it) Fitting Poisson LDS via LaPlaceEM... 45%|██████████████████████▌ | ETA: 0:00:02 (40.27 ms/it) Fitting Poisson LDS via LaPlaceEM... 48%|████████████████████████ | ETA: 0:00:02 (40.13 ms/it) Fitting Poisson LDS via LaPlaceEM... 52%|██████████████████████████ | ETA: 0:00:02 (39.35 ms/it) Fitting Poisson LDS via LaPlaceEM... 56%|████████████████████████████ | ETA: 0:00:02 (39.06 ms/it) Fitting Poisson LDS via LaPlaceEM... 60%|██████████████████████████████ | ETA: 0:00:02 (38.42 ms/it) Fitting Poisson LDS via LaPlaceEM... 64%|████████████████████████████████ | ETA: 0:00:01 (37.82 ms/it) Fitting Poisson LDS via LaPlaceEM... 67%|█████████████████████████████████▌ | ETA: 0:00:01 (37.85 ms/it) Fitting Poisson LDS via LaPlaceEM... 71%|███████████████████████████████████▌ | ETA: 0:00:01 (37.42 ms/it) Fitting Poisson LDS via LaPlaceEM... 74%|█████████████████████████████████████ | ETA: 0:00:01 (37.47 ms/it) Fitting Poisson LDS via LaPlaceEM... 78%|███████████████████████████████████████ | ETA: 0:00:01 (37.04 ms/it) 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via LaPlaceEM... 90%|█████████████████████████████████████████████ | ETA: 0:00:01 ( 0.12 s/it) Fitting Poisson LDS via LaPlaceEM... 91%|█████████████████████████████████████████████▌ | ETA: 0:00:01 ( 0.12 s/it) Fitting Poisson LDS via LaPlaceEM... 92%|██████████████████████████████████████████████ | ETA: 0:00:01 ( 0.12 s/it) Fitting Poisson LDS via LaPlaceEM... 93%|██████████████████████████████████████████████▌ | ETA: 0:00:01 ( 0.12 s/it) Fitting Poisson LDS via LaPlaceEM... 94%|███████████████████████████████████████████████ | ETA: 0:00:01 ( 0.12 s/it) Fitting Poisson LDS via LaPlaceEM... 95%|███████████████████████████████████████████████▌ | ETA: 0:00:01 ( 0.12 s/it) Fitting Poisson LDS via LaPlaceEM... 96%|████████████████████████████████████████████████ | ETA: 0:00:00 ( 0.12 s/it) Fitting Poisson LDS via LaPlaceEM... 97%|████████████████████████████████████████████████▌ | ETA: 0:00:00 ( 0.12 s/it) Fitting Poisson LDS via LaPlaceEM... 98%|█████████████████████████████████████████████████ | ETA: 0:00:00 ( 0.12 s/it) Fitting Poisson LDS via LaPlaceEM... 99%|█████████████████████████████████████████████████▌| ETA: 0:00:00 ( 0.12 s/it) Fitting Poisson LDS via LaPlaceEM... 100%|██████████████████████████████████████████████████| Time: 0:00:12 ( 0.12 s/it) Test Summary: | Pass Total Time PoissonLDS Tests | 62 62 2m27.0s Running EM algorithm... 2%|█ | ETA: 0:02:41 ( 1.64 s/it) Running EM algorithm... 3%|█▌ | ETA: 0:01:53 ( 1.16 s/it) Running EM algorithm... 100%|██████████████████████████████████████████████████| Time: 0:00:03 (34.89 ms/it) ┌ Warning: User did not provide as many emmission models as the function expects (K=2). │ Filling in the rest with deep copies of the provided emission model. │ If this is not the desired behavior, specify all the emission models in the 'B=Vector{EmissionModel}' argument │ rather than 'emission' └ @ StateSpaceDynamics ~/.julia/packages/StateSpaceDynamics/zrsML/src/HiddenMarkovModels.jl:75 Test Summary: | Pass Total Time GaussianHMM Tests | 21 21 43.3s Running EM algorithm... 1%|▌ | ETA: 0:00:46 ( 0.23 s/it) Running EM algorithm... 2%|▊ | ETA: 0:00:45 ( 0.23 s/it) Running EM algorithm... 2%|█ | ETA: 0:00:44 ( 0.23 s/it) Running EM algorithm... 2%|█▎ | ETA: 0:00:51 ( 0.26 s/it) Running EM algorithm... 3%|█▌ | ETA: 0:01:21 ( 0.42 s/it) Running EM algorithm... 4%|█▊ | ETA: 0:01:16 ( 0.39 s/it) Running EM algorithm... 4%|██ | ETA: 0:01:11 ( 0.37 s/it) Running EM algorithm... 4%|██▎ | ETA: 0:01:06 ( 0.35 s/it) Running EM algorithm... 100%|██████████████████████████████████████████████████| Time: 0:00:03 (15.66 ms/it) Test Summary: | Pass Broken Total Time Switching Gaussian Regression Tests | 10 2 12 21.7s WARNING: Method definition sample_states(Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/HiddenMarkovModels/SwitchingGaussianRegression.jl:164 overwritten at /home/pkgeval/.julia/packages/StateSpaceDynamics/zrsML/test/HiddenMarkovModels/SwitchingPoissonRegression.jl:124. Running EM algorithm... 1%|▌ | ETA: 0:02:21 ( 0.71 s/it) Running EM algorithm... 2%|▊ | ETA: 0:02:22 ( 0.72 s/it) Running EM algorithm... 2%|█ | ETA: 0:02:14 ( 0.68 s/it) Running EM algorithm... 2%|█▎ | ETA: 0:02:02 ( 0.63 s/it) Running EM algorithm... 3%|█▌ | ETA: 0:01:53 ( 0.58 s/it) Running EM algorithm... 4%|█▊ | ETA: 0:01:43 ( 0.54 s/it) Running EM algorithm... 4%|██ | ETA: 0:01:36 ( 0.50 s/it) Running EM algorithm... 4%|██▎ | ETA: 0:01:32 ( 0.48 s/it) Running EM algorithm... 5%|██▌ | ETA: 0:01:27 ( 0.46 s/it) Running EM algorithm... 6%|██▊ | ETA: 0:01:23 ( 0.44 s/it) Running EM algorithm... 6%|███ | ETA: 0:01:20 ( 0.43 s/it) Running EM algorithm... 6%|███▎ | ETA: 0:01:17 ( 0.41 s/it) Running EM algorithm... 7%|███▌ | ETA: 0:01:15 ( 0.40 s/it) Running EM algorithm... 8%|███▊ | ETA: 0:01:13 ( 0.39 s/it) Running EM algorithm... 8%|████ | ETA: 0:01:11 ( 0.39 s/it) Running EM algorithm... 8%|████▎ | ETA: 0:01:09 ( 0.38 s/it) Running EM algorithm... 9%|████▌ | ETA: 0:01:08 ( 0.37 s/it) Running EM algorithm... 10%|████▊ | ETA: 0:01:06 ( 0.37 s/it) Running EM algorithm... 10%|█████ | ETA: 0:01:05 ( 0.36 s/it) Running EM algorithm... 10%|█████▎ | ETA: 0:01:04 ( 0.36 s/it) Running EM algorithm... 11%|█████▌ | ETA: 0:01:03 ( 0.35 s/it) Running EM algorithm... 100%|██████████████████████████████████████████████████| Time: 0:00:07 (38.72 ms/it) Test Summary: | Pass Total Time Switching Poisson Regression Tests | 7 7 28.6s Running EM algorithm... 1%|▌ | ETA: 0:01:17 ( 0.39 s/it) Running EM algorithm... 2%|▊ | ETA: 0:02:46 ( 0.84 s/it) Running EM algorithm... 2%|█ | ETA: 0:02:28 ( 0.75 s/it) Running EM algorithm... 2%|█▎ | ETA: 0:02:20 ( 0.72 s/it) Running EM algorithm... 3%|█▌ | ETA: 0:02:09 ( 0.66 s/it) Running EM algorithm... 4%|█▊ | ETA: 0:02:01 ( 0.63 s/it) Running EM algorithm... 4%|██ | ETA: 0:01:56 ( 0.60 s/it) Running EM algorithm... 4%|██▎ | ETA: 0:01:50 ( 0.58 s/it) Running EM algorithm... 5%|██▌ | ETA: 0:01:46 ( 0.56 s/it) Running EM algorithm... 6%|██▊ | ETA: 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100%|██████████████████████████████████████████████████| Time: 0:00:14 (73.67 ms/it) Test Summary: | Pass Total Time Switching Bernoulli Regression Tests | 8 8 29.6s Iteration: 1, Log-likelihood: -28.859086059841253 Iteration: 2, Log-likelihood: -28.859086059841253 Convergence reached at iteration 2 Iteration: 1, Log-likelihood: -19.945488082874633 Iteration: 1, Log-likelihood: -14.635278416091333 Iteration: 1, Log-likelihood: -7.694968539660957 Iteration: 1, Log-likelihood: -7.4681761583154564 Iteration: 1, Log-likelihood: -7.0740441700754095 Iteration: 1, Log-likelihood: -6.507365558323465 Iteration: 1, Log-likelihood: -5.9317827053488035 Iteration: 1, Log-likelihood: -5.759778783598206 Iteration: 1, Log-likelihood: -5.745948471346072 Iteration: 1, Log-likelihood: -5.735193691869415 Iteration: 1, Log-likelihood: -1380.6062268205442 Iteration: 2, Log-likelihood: -1380.2268660002546 Iteration: 3, Log-likelihood: -1380.1664643459162 Iteration: 4, Log-likelihood: -1380.1489509503717 Iteration: 5, Log-likelihood: -1380.1384318473174 Iteration: 6, Log-likelihood: -1380.1296945009603 Iteration: 7, Log-likelihood: -1380.12187005699 Iteration: 8, Log-likelihood: -1380.1147467956139 Iteration: 9, Log-likelihood: -1380.1082244714125 Iteration: 10, Log-likelihood: -1380.1022296134838 Iteration: 1, Log-likelihood: -1380.483747742748 Iteration: 1, Log-likelihood: -1380.4833856595835 Iteration: 1, Log-likelihood: -1380.4830307094758 Iteration: 1, Log-likelihood: -1380.482682662757 Iteration: 1, Log-likelihood: -1380.482341311812 Iteration: 1, Log-likelihood: -1380.4820064610205 Iteration: 1, Log-likelihood: -1380.4816779233342 Iteration: 1, Log-likelihood: -1380.48135551903 Iteration: 1, Log-likelihood: -1380.481039075085 Iteration: 1, Log-likelihood: -1380.480728424818 Iteration: 1, Log-likelihood: -912.4135057528385 Iteration: 2, Log-likelihood: -910.1932895640164 Iteration: 3, Log-likelihood: -909.6030090915274 Iteration: 4, Log-likelihood: -909.4262159758922 Iteration: 5, Log-likelihood: -909.3555076192131 Iteration: 6, Log-likelihood: -909.3145135882085 Iteration: 7, Log-likelihood: -909.283423724593 Iteration: 8, Log-likelihood: -909.2568261433926 Iteration: 9, Log-likelihood: -909.2330984648128 Iteration: 10, Log-likelihood: -909.2116404974792 Iteration: 1, Log-likelihood: -940.5580582487876 Iteration: 1, Log-likelihood: -920.4165563697811 Iteration: 1, Log-likelihood: -914.0080555141354 Iteration: 1, Log-likelihood: -912.3490104229344 Iteration: 1, Log-likelihood: -911.7681651961315 Iteration: 1, Log-likelihood: -911.4815462566895 Iteration: 1, Log-likelihood: -911.2965509515165 Iteration: 1, Log-likelihood: -911.1537993717462 Iteration: 1, Log-likelihood: -911.0324349063259 Iteration: 1, Log-likelihood: -910.9244257320208 Test Summary: | Pass Total Time MixtureModels.jl Tests | 129 129 11.8s Test Summary: | Pass Total Time GaussianRegression Tests | 27 27 10.5s Test Summary: | Pass Total Time BernoulliRegression Tests | 24 24 8.5s Test Summary: | Pass Broken Total Time PoissonRegression Tests | 22 2 24 11.7s Test Summary: | Pass Total Time AutoRegression Tests | 4 4 0.2s [0.12800730765641333 -1.7778105696372748 2.461051453634651 4.198514984435976 1.047036324648504 0.17636189825917192 0.1610465513570299 -3.6513823023401177 1.4762220489517779 -0.7797082595411655 1.0105566915561028 -2.041933057566471 -0.22418899941049064 -1.8768250243020554 -3.8081345559290147 -3.031984704838285 -1.3839629358831562 1.5168494563989574 -2.2039472258013815 2.93527848291415 -3.3287076556137327 2.19144321834126 -2.1793104085155135 -0.23558404190491788 0.3998298448274423 -0.60980924721569 -1.0513847894827384 0.1989961749992224 -2.968155362189533 1.1286702035706921 2.347005402784337 1.6043415569265702 -3.022325805844426 0.4715754716613083 2.778020541417531 -0.6292954790713519 -0.2555236504369697 0.7512575045819194 -0.3056930196109302 -4.001335594396212 -3.4530067016682944 0.6973726334318756 -0.12848053545420124 -7.351145833751661 -1.2450461031696993 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-3.376316301967769 2.2498166065932246 -1.5257509908804083 0.8828025576428737 1.9710985320855685 3.173301813238145 -4.641622808108342 0.9763003630518251 -0.4148109332009183 -2.4479540249617266 1.2080611380684276 -1.72346149619639 1.3518155895623145 0.043244556427066705 -0.17404302177872255 0.39643172150871875 -0.24161486827462342 -0.9904728908083829 2.7698996325232996 -0.17283138714079666 1.2079247810269538 -3.3874680843385 2.4605736624713312 -3.0959853218584827 1.4726854114027772 2.858687988610952 1.7424191756402676 -2.162043533770902 -0.11886859648876191 -1.0004690100716387 -0.6291828962909145 1.2107668208947107 2.473730065957548 -2.731524662443431 -0.8938007971146437 0.28535794436150774 -2.2158881457167214 -1.1372871934161752 -2.098785103406426 -1.6649307399574014 -0.08039325777444783 -1.1380385055888174 -0.9056312084485425 3.5175169356497644 1.1671972877973187 0.8419121330790891 1.3906491378822396 -0.8776248901643112 -1.0534588712096633 2.666099126916162 1.4109151826472996 0.3061189277875814 -1.950154816898657 0.2333004694558336 2.9811394438309518 -3.749499795443319 1.321335055213788 1.5474956738118113 -1.6533282385892183 2.3453160391945187 1.335739432975942 -3.117827620439067 2.8333494978326175 -4.142457684710884 -0.29596022526713595 2.1678714004934942 -3.1336647179790944 -1.125921115983384 4.526157011199841 -0.032099681323175484 0.3831731041668793 -2.835752230113339 -3.576725771983713 0.6602797709821799 -2.430886132587153 -0.1827858605081274 4.311670822267079 -5.456343231078268 -4.204033100300539 -1.3408418378517126 -0.936762001965382 1.5678539638217937 0.23963231914386146 -1.2183896438176491]Test Summary: | Pass Total Time AutoRegressive HMM Tests | 10 10 8.6s Test Summary: | Pass Total Time Utilities.jl Tests | 76 76 7.9s Fitting Probabilistic PCA... 2%|▌ | ETA: 0:00:27 Fitting Probabilistic PCA... 100%|███████████████████████| Time: 0:00:00 Test Summary: | Pass Total Time PPCA Tests | 23 23 11.1s Running EM algorithm... 2%|█ | ETA: 0:01:05 ( 0.66 s/it) Running EM algorithm... 3%|█▌ | ETA: 0:00:57 ( 0.59 s/it) Running EM algorithm... 4%|██ | ETA: 0:00:54 ( 0.56 s/it) Running EM algorithm... 5%|██▌ | ETA: 0:00:51 ( 0.54 s/it) Running EM algorithm... 6%|███ | ETA: 0:00:49 ( 0.52 s/it) Running EM algorithm... 7%|███▌ | ETA: 0:00:47 ( 0.51 s/it) Running EM algorithm... 8%|████ | ETA: 0:01:00 ( 0.65 s/it) Running EM algorithm... 9%|████▌ | ETA: 0:00:57 ( 0.63 s/it) Running EM algorithm... 10%|█████ | ETA: 0:00:56 ( 0.62 s/it) Running EM algorithm... 11%|█████▌ | ETA: 0:00:54 ( 0.61 s/it) Running EM algorithm... 12%|██████ | ETA: 0:00:52 ( 0.60 s/it) Running EM algorithm... 13%|██████▌ | ETA: 0:00:51 ( 0.58 s/it) Running EM algorithm... 14%|███████ | ETA: 0:00:49 ( 0.58 s/it) Running EM algorithm... 15%|███████▌ | ETA: 0:00:48 ( 0.57 s/it) Running EM algorithm... 16%|████████ | ETA: 0:00:47 ( 0.56 s/it) Running EM algorithm... 100%|██████████████████████████████████████████████████| Time: 0:00:08 (89.53 ms/it) Running EM algorithm... 2%|█ | ETA: 0:00:33 ( 0.34 s/it) Running EM algorithm... 5%|██▌ | ETA: 0:00:16 ( 0.16 s/it) Running EM algorithm... 8%|████ | ETA: 0:00:11 ( 0.12 s/it) Running EM algorithm... 10%|█████ | ETA: 0:00:10 ( 0.11 s/it) Running EM algorithm... 13%|██████▌ | ETA: 0:00:08 (93.59 ms/it) Running EM algorithm... 16%|████████ | ETA: 0:00:07 (84.19 ms/it) Running EM algorithm... 100%|██████████████████████████████████████████████████| Time: 0:00:01 (14.07 ms/it) Test Summary: | Pass Total Time Viterbi and Class Probability Tests | 37 37 20.0s Testing StateSpaceDynamics tests passed Testing completed after 718.81s PkgEval succeeded after 1389.15s