Package evaluation of ADCME on Julia 1.13.0-DEV.759 (3bb7518b04*) started at 2025-06-19T19:16:40.333 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 11.17s ################################################################################ # Installation # Installing ADCME... Resolving package versions... Installed MKL_jll ───────────── v2025.0.1+1 Installed libaec_jll ────────── v1.1.3+0 Installed VersionParsing ────── v1.3.0 Installed MPICH_jll ─────────── v4.3.0+1 Installed MacroTools ────────── v0.5.16 Installed oneTBB_jll ────────── v2022.0.0+0 Installed CodecZlib ─────────── v0.7.8 Installed TranscodingStreams ── v0.11.3 Installed MicrosoftMPI_jll ──── v10.1.4+3 Installed IntelOpenMP_jll ───── v2025.0.4+0 Installed Compat ────────────── v4.16.0 Installed Statistics ────────── v1.11.1 Installed Conda ─────────────── v1.10.2 Installed PrecompileTools ───── v1.3.2 Installed ChainRulesCore ────── v1.25.1 Installed OpenSpecFun_jll ───── v0.5.6+0 Installed Requires ──────────── v1.3.1 Installed AbstractFFTs ──────── v1.5.0 Installed PyCall ────────────── v1.96.4 Installed LogExpFunctions ───── v0.3.29 Installed IrrationalConstants ─ v0.1.1 Installed HDF5_jll ──────────── v1.14.6+0 Installed OpenMPI_jll ───────── v5.0.8+0 Installed BufferedStreams ───── v1.2.2 Installed Hwloc_jll ─────────── v2.12.1+0 Installed JSON ──────────────── v0.21.4 Installed CMake ─────────────── v1.2.0 Installed URIParser ─────────── v0.4.1 Installed Parsers ───────────── v2.8.3 Installed MPIPreferences ────── v0.1.11 Installed Reexport ──────────── v1.2.2 Installed FFTW_jll ──────────── v3.3.11+0 Installed FFTW ──────────────── v1.9.0 Installed Preferences ───────── v1.4.3 Installed JLLWrappers ───────── v1.7.0 Installed SpecialFunctions ──── v1.8.8 Installed BinDeps ───────────── v1.0.2 Installed MPItrampoline_jll ─── v5.5.3+0 Installed DocStringExtensions ─ v0.9.5 Installed MAT ───────────────── v0.10.7 Installed ADCME ─────────────── v0.7.3 Installed HDF5 ──────────────── v0.17.2 Installing 7 artifacts Installed artifact libaec 96.2 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact oneTBB 435.6 KiB Installed artifact FFTW 2.2 MiB Installed artifact Hwloc 3.5 MiB Installed artifact MPICH 3.3 MiB Installed artifact HDF5 5.7 MiB Updating `~/.julia/environments/v1.13/Project.toml` [07b341a0] + ADCME v0.7.3 Updating `~/.julia/environments/v1.13/Manifest.toml` [07b341a0] + ADCME v0.7.3 [621f4979] + AbstractFFTs v1.5.0 [9e28174c] + BinDeps v1.0.2 [e1450e63] + BufferedStreams v1.2.2 [631607c0] + CMake v1.2.0 [d360d2e6] + ChainRulesCore v1.25.1 [944b1d66] + CodecZlib v0.7.8 [34da2185] + Compat v4.16.0 [8f4d0f93] + Conda v1.10.2 [ffbed154] + DocStringExtensions v0.9.5 [7a1cc6ca] + FFTW v1.9.0 [f67ccb44] + HDF5 v0.17.2 ⌅ [92d709cd] + IrrationalConstants v0.1.1 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] + JSON v0.21.4 [2ab3a3ac] + LogExpFunctions v0.3.29 [23992714] + MAT v0.10.7 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [69de0a69] + Parsers v2.8.3 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [438e738f] + PyCall v1.96.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 ⌅ [276daf66] + SpecialFunctions v1.8.8 [10745b16] + Statistics v1.11.1 [3bb67fe8] + TranscodingStreams v0.11.3 [30578b45] + URIParser v0.4.1 [81def892] + VersionParsing v1.3.0 [f5851436] + FFTW_jll v3.3.11+0 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.1+0 [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0 [856f044c] + MKL_jll v2025.0.1+1 [7cb0a576] + MPICH_jll v4.3.0+1 [f1f71cc9] + MPItrampoline_jll v5.5.3+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.8+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [477f73a3] + libaec_jll v1.1.3+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.14.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.5.20 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.5.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building Conda ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b19db3927f0db4151cb86d073689f2428e524576/build.log` Building PyCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9816a3826b0ebf49ab4926e2b18842ad8b5c8f04/build.log` Building CMake ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/50a8b41d2c562fccd9ab841085fc7d1e2706da82/build.log` Building ADCME ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/4ecfc24dbdf551f92b5de7ea2d99da3f7fde73c9/build.log` Installation completed after 1369.1s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4877.8 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 25 already precompiled. Precompiling package dependencies... Precompilation completed after 332.48s ################################################################################ # Testing # Testing ADCME Status `/tmp/jl_CIAyBw/Project.toml` [07b341a0] ADCME v0.7.3 [631607c0] CMake v1.2.0 [7a1cc6ca] FFTW v1.9.0 [23992714] MAT v0.10.7 [76087f3c] NLopt v1.1.4 [429524aa] Optim v1.13.2 [438e738f] PyCall v1.96.4 [d330b81b] PyPlot v2.11.6 ⌅ [276daf66] SpecialFunctions v1.8.8 [10745b16] Statistics v1.11.1 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [44cfe95a] Pkg v1.13.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.12.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_CIAyBw/Manifest.toml` [07b341a0] ADCME v0.7.3 [47edcb42] ADTypes v1.14.0 [621f4979] AbstractFFTs v1.5.0 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [4fba245c] ArrayInterface v7.19.0 [9e28174c] BinDeps v1.0.2 [e1450e63] BufferedStreams v1.2.2 [fa961155] CEnum v0.5.0 [631607c0] CMake v1.2.0 [d360d2e6] ChainRulesCore v1.25.1 [944b1d66] CodecZlib v0.7.8 [3da002f7] ColorTypes v0.12.1 [5ae59095] Colors v0.13.1 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.16.0 [8f4d0f93] Conda v1.10.2 [187b0558] ConstructionBase v1.6.0 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.22 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.1 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.5 [7a1cc6ca] FFTW v1.9.0 [1a297f60] FillArrays v1.13.0 [6a86dc24] FiniteDiff v2.27.0 [53c48c17] FixedPointNumbers v0.8.5 [f6369f11] ForwardDiff v1.0.1 [f67ccb44] HDF5 v0.17.2 ⌅ [92d709cd] IrrationalConstants v0.1.1 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [b964fa9f] LaTeXStrings v1.4.0 [d3d80556] LineSearches v7.4.0 [2ab3a3ac] LogExpFunctions v0.3.29 [23992714] MAT v0.10.7 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [d41bc354] NLSolversBase v7.10.0 [76087f3c] NLopt v1.1.4 [77ba4419] NaNMath v1.1.3 [429524aa] Optim v1.13.2 [bac558e1] OrderedCollections v1.8.1 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [85a6dd25] PositiveFactorizations v0.2.4 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [43287f4e] PtrArrays v1.3.0 [438e738f] PyCall v1.96.4 [d330b81b] PyPlot v2.11.6 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [efcf1570] Setfield v1.1.2 [a2af1166] SortingAlgorithms v1.2.1 ⌅ [276daf66] SpecialFunctions v1.8.8 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.5 [3bb67fe8] TranscodingStreams v0.11.3 [30578b45] URIParser v0.4.1 [3a884ed6] UnPack v1.0.2 [81def892] VersionParsing v1.3.0 [f5851436] FFTW_jll v3.3.11+0 [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.1+0 [1d5cc7b8] IntelOpenMP_jll v2025.0.4+0 [856f044c] MKL_jll v2025.0.1+1 [7cb0a576] MPICH_jll v4.3.0+1 [f1f71cc9] MPItrampoline_jll v5.5.3+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [079eb43e] NLopt_jll v2.10.0+0 [fe0851c0] OpenMPI_jll v5.0.8+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [477f73a3] libaec_jll v1.1.3+0 [1317d2d5] oneTBB_jll v2022.0.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.14.1+1 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.5.20 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.12.0+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... Info Given ADCME was explicitly requested, output will be shown live  WARNING: method definition for #newton_raphson#39 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:462 declares type variable T but does not use it. WARNING: method definition for #newton_raphson_with_grad#49 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:616 declares type variable T but does not use it. WARNING: method definition for NonlinearConstrainedProblem at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:690 declares type variable T but does not use it. WARNING: Method definition size(PyCall.PyObject) in module PyCall at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/PyCall.jl:820 overwritten in module ADCME at /home/pkgeval/.julia/packages/ADCME/94vEM/src/variable.jl:214. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 13916.6 ms ? ADCME WARNING: method definition for #newton_raphson#39 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:462 declares type variable T but does not use it. WARNING: method definition for #newton_raphson_with_grad#49 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:616 declares type variable T but does not use it. WARNING: method definition for NonlinearConstrainedProblem at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:690 declares type variable T but does not use it. WARNING: Method definition size(PyCall.PyObject) in module PyCall at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/PyCall.jl:820 overwritten in module ADCME at /home/pkgeval/.julia/packages/ADCME/94vEM/src/variable.jl:214. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. WARNING: method definition for #newton_raphson#39 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:462 declares type variable T but does not use it. WARNING: method definition for #newton_raphson_with_grad#49 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:616 declares type variable T but does not use it. WARNING: method definition for NonlinearConstrainedProblem at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:690 declares type variable T but does not use it. WARNING: Method definition size(PyCall.PyObject) in module PyCall at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/PyCall.jl:820 overwritten in module ADCME at /home/pkgeval/.julia/packages/ADCME/94vEM/src/variable.jl:214. WARNING: Method definition length(PyCall.PyObject) in module PyCall at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/PyCall.jl:819 overwritten in module ADCME at /home/pkgeval/.julia/packages/ADCME/94vEM/src/variable.jl:238. WARNING: Method definition lastindex(PyCall.PyObject) in module PyCall at deprecated.jl:213 overwritten in module ADCME at /home/pkgeval/.julia/packages/ADCME/94vEM/src/variable.jl:454. WARNING: Method definition *(PyCall.PyObject, PyCall.PyObject) in module PyCall at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/pyoperators.jl:11 overwritten in module ADCME at /home/pkgeval/.julia/packages/ADCME/94vEM/src/ops.jl:104. WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead). You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. OMP: Info #212: KMP_AFFINITY: decoding x2APIC ids. OMP: Info #210: KMP_AFFINITY: Affinity capable, using global cpuid leaf 11 info OMP: Info #154: KMP_AFFINITY: Initial OS proc set respected: 64 OMP: Info #156: KMP_AFFINITY: 1 available OS procs OMP: Info #157: KMP_AFFINITY: Uniform topology OMP: Info #159: KMP_AFFINITY: 1 packages x 1 cores/pkg x 1 threads/core (1 total cores) OMP: Info #214: KMP_AFFINITY: OS proc to physical thread map: OMP: Info #171: KMP_AFFINITY: OS proc 64 maps to package 0 OMP: Info #250: KMP_AFFINITY: pid 11545 tid 11545 thread 0 bound to OS proc set 64 ┌ Warning: Cannot load /home/pkgeval/.julia/packages/ADCME/94vEM/deps/CustomOps/build/libadcme.so. Please recompile the shared library by `ADCME.precompile()` for using custom operators. └ @ ADCME ~/.julia/packages/ADCME/94vEM/src/ADCME.jl:78 Requirement already satisfied: matplotlib in /home/pkgeval/.julia/adcme/lib/python3.7/site-packages (3.3.1) Requirement already satisfied: pyparsing!=2.0.4,!=2.1.2,!=2.1.6,>=2.0.3 in /home/pkgeval/.julia/adcme/lib/python3.7/site-packages (from matplotlib) (2.4.7) Requirement already satisfied: python-dateutil>=2.1 in /home/pkgeval/.julia/adcme/lib/python3.7/site-packages (from matplotlib) (2.8.1) Requirement already satisfied: kiwisolver>=1.0.1 in /home/pkgeval/.julia/adcme/lib/python3.7/site-packages (from matplotlib) (1.2.0) Requirement already satisfied: cycler>=0.10 in /home/pkgeval/.julia/adcme/lib/python3.7/site-packages (from matplotlib) (0.10.0) Requirement already satisfied: certifi>=2020.06.20 in /home/pkgeval/.julia/adcme/lib/python3.7/site-packages (from matplotlib) (2020.6.20) Requirement already satisfied: pillow>=6.2.0 in /home/pkgeval/.julia/adcme/lib/python3.7/site-packages (from matplotlib) (7.2.0) Requirement already satisfied: numpy>=1.15 in /home/pkgeval/.julia/adcme/lib/python3.7/site-packages (from matplotlib) (1.19.1) Requirement already satisfied: six>=1.5 in /home/pkgeval/.julia/adcme/lib/python3.7/site-packages (from python-dateutil>=2.1->matplotlib) (1.14.0) 2025-06-19 19:48:03.147803: I tensorflow/core/platform/cpu_feature_guard.cc:145] This TensorFlow binary is optimized with Intel(R) MKL-DNN to use the following CPU instructions in performance critical operations: SSE4.1 SSE4.2 AVX AVX2 FMA To enable them in non-MKL-DNN operations, rebuild TensorFlow with the appropriate compiler flags. 2025-06-19 19:48:03.158020: I tensorflow/core/platform/profile_utils/cpu_utils.cc:94] CPU Frequency: 2499810000 Hz 2025-06-19 19:48:03.158239: I tensorflow/compiler/xla/service/service.cc:168] XLA service 0x18f9120 initialized for platform Host (this does not guarantee that XLA will be used). Devices: 2025-06-19 19:48:03.158253: I tensorflow/compiler/xla/service/service.cc:176] StreamExecutor device (0): Host, Default Version [✔️] Julia version [✔️] TensorFlow version [✔️] Python executable file [✘] Julia path (Optional) [Reason] `julia` outputs nothing. This will break custom operator compilation. [Instruction] Add your julia binary path to your environment path, e.g. (Unix systems) export PATH=/opt/julia/bin:$PATH For convenience, you can add the above line to your `~/.bashrc` (Linux) or `~/.bash_profile` (Apple). For Windows, you need to add it to system environment. [✔️] Dynamic library path [✔️] Memory Address Length = 64 [✘] Binaries path [Reason] /home/pkgeval/.julia/adcme/bin is not in PATH. This path contains compatible tools such as a GCC compiler, `cmake`, `make`, or any other tools you want to use directly from terminal. However, setting the path is NOT a requirement, and ADCME works totally fine without any action. [Instruction] (Optional) Add your binary path to your environment path, e.g. (Unix systems) export PATH=/home/pkgeval/.julia/adcme/bin:$PATH For convenience, you can add the above line to your `~/.bashrc` (Linux) or `~/.bash_profile` (Apple). For Windows, you need to add it to system environment. [✘] GPU Support (Optional) [Reason] ADCME is not compiled against GPU. [Instruction] If you intend to use GPU, set ENV["GPU"] = 1 and then rebuild ADCME. ============================================================ /home/pkgeval/.julia/packages/ADCME/94vEM/deps/deps.jl ============================================================ BINDIR = "/home/pkgeval/.julia/adcme/bin" LIBDIR = "/home/pkgeval/.julia/adcme/lib" TF_INC = "/home/pkgeval/.julia/adcme/lib/python3.7/site-packages/tensorflow_core/include" TF_ABI = "1" PREFIXDIR = "/home/pkgeval/.julia/adcme/lib/Libraries" CC = "/home/pkgeval/.julia/adcme/bin/x86_64-conda_cos6-linux-gnu-gcc" CXX = "/home/pkgeval/.julia/adcme/bin/x86_64-conda_cos6-linux-gnu-g++" CMAKE = "/home/pkgeval/.julia/adcme/bin/cmake" MAKE = "/home/pkgeval/.julia/adcme/bin/make" GIT = "LibGit2" PYTHON = "/home/pkgeval/.julia/adcme/bin/python" TF_LIB_FILE = "/home/pkgeval/.julia/adcme/lib/python3.7/site-packages/tensorflow_core/libtensorflow_framework.so.1" LIBCUDA = "" CUDA_INC = "" NINJA = "/home/pkgeval/.julia/adcme/bin/ninja" INCDIR = "/home/pkgeval/.julia/adcme/include" __STR__ = join([BINDIR,LIBDIR,TF_INC,TF_ABI,PREFIXDIR,CC,CXX,CMAKE,MAKE,GIT,PYTHON,TF_LIB_FILE,LIBCUDA,CUDA_INC,NINJA,INCDIR], ";") 2025-06-19 19:48:04.416596: I tensorflow/core/common_runtime/process_util.cc:115] Creating new thread pool with default inter op setting: 2. Tune using inter_op_parallelism_threads for best performance. Test Summary: | Pass Total Time indexing for rank 3 tensors | 3 3 12.6s [ Info: Changed to directory /home/pkgeval/.julia/adcme/lib/Libraries [ Info: Cloning from https://github.com/ADCMEMarket/Adept-2 to Adept-2... [ Info: Cloned https://github.com/ADCMEMarket/Adept-2 to Adept-2 [ Info: Made directory directory [ Info: Changed to directory build -- The C compiler identification is GNU 5.4.0 -- The CXX compiler identification is GNU 5.4.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /home/pkgeval/.julia/adcme/bin/x86_64-conda_cos6-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /home/pkgeval/.julia/adcme/bin/x86_64-conda_cos6-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done JULIA=/opt/julia/bin/julia Precompiling packages... 7888.3 ms ✓ MacroTools 1261.4 ms ✓ TranscodingStreams 1088.4 ms ✓ BufferedStreams 1125.9 ms ✓ Statistics 812.8 ms ✓ Reexport 1289.5 ms ✓ DocStringExtensions 2485.0 ms ✓ VersionParsing 2608.1 ms ✓ IrrationalConstants 1213.8 ms ✓ AbstractFFTs 2001.4 ms ✓ Requires 3382.7 ms ✓ URIParser 4174.5 ms ✓ Preferences 1185.5 ms ✓ Compat 1006.2 ms ✓ CodecZlib 1309.7 ms ✓ Statistics → SparseArraysExt 1463.5 ms ✓ LogExpFunctions 8977.0 ms ✓ BinDeps 1547.6 ms ✓ MPIPreferences 1663.2 ms ✓ JLLWrappers 1067.8 ms ✓ PrecompileTools 933.8 ms ✓ Compat → CompatLinearAlgebraExt 841.8 ms ✓ CMake 5271.2 ms ✓ MPItrampoline_jll 1252.5 ms ✓ MicrosoftMPI_jll 1541.4 ms ✓ OpenSpecFun_jll 1705.3 ms ✓ libaec_jll 1676.5 ms ✓ FFTW_jll 5639.2 ms ✓ IntelOpenMP_jll 1524.4 ms ✓ Hwloc_jll 1724.0 ms ✓ oneTBB_jll 50469.0 ms ✓ Parsers 4771.7 ms ✓ ChainRulesCore 6147.7 ms ✓ OpenMPI_jll 6593.0 ms ✓ MPICH_jll 6062.9 ms ✓ MKL_jll 5264.9 ms ✓ JSON 1426.3 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 1059.5 ms ✓ AbstractFFTs → AbstractFFTsChainRulesCoreExt 3019.0 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 8681.8 ms ✓ HDF5_jll 44454.6 ms ✓ FFTW 2878.8 ms ✓ Conda 8834.6 ms ✓ SpecialFunctions 26121.1 ms ✓ HDF5 63952.5 ms ✓ PyCall 7838.4 ms ✓ MAT Info Given ADCME was explicitly requested, output will be shown live  WARNING: method definition for #newton_raphson#39 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:462 declares type variable T but does not use it. WARNING: method definition for #newton_raphson_with_grad#49 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:616 declares type variable T but does not use it. WARNING: method definition for NonlinearConstrainedProblem at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:690 declares type variable T but does not use it. WARNING: Method definition size(PyCall.PyObject) in module PyCall at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/PyCall.jl:820 overwritten in module ADCME at /home/pkgeval/.julia/packages/ADCME/94vEM/src/variable.jl:214. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 9953.9 ms ? ADCME 46 dependencies successfully precompiled in 327 seconds. 31 already precompiled. 1 dependencies failed but may be precompilable after restarting julia 1 dependency had output during precompilation: ┌ ADCME │ [Output was shown above] └ WARNING: method definition for #newton_raphson#39 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:462 declares type variable T but does not use it. WARNING: method definition for #newton_raphson_with_grad#49 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:616 declares type variable T but does not use it. WARNING: method definition for NonlinearConstrainedProblem at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:690 declares type variable T but does not use it. WARNING: Method definition size(PyCall.PyObject) in module PyCall at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/PyCall.jl:820 overwritten in module ADCME at /home/pkgeval/.julia/packages/ADCME/94vEM/src/variable.jl:214. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. WARNING: method definition for #newton_raphson#39 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:462 declares type variable T but does not use it. WARNING: method definition for #newton_raphson_with_grad#49 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:616 declares type variable T but does not use it. WARNING: method definition for NonlinearConstrainedProblem at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:690 declares type variable T but does not use it. OMP: Info #212: KMP_AFFINITY: decoding x2APIC ids. OMP: Info #210: KMP_AFFINITY: Affinity capable, using global cpuid leaf 11 info OMP: Info #154: KMP_AFFINITY: Initial OS proc set respected: 64 OMP: Info #156: KMP_AFFINITY: 1 available OS procs OMP: Info #157: KMP_AFFINITY: Uniform topology OMP: Info #159: KMP_AFFINITY: 1 packages x 1 cores/pkg x 1 threads/core (1 total cores) OMP: Info #214: KMP_AFFINITY: OS proc to physical thread map: OMP: Info #171: KMP_AFFINITY: OS proc 64 maps to package 0 OMP: Info #250: KMP_AFFINITY: pid 11624 tid 11624 thread 0 bound to OS proc set 64 ┌ Warning: Cannot load /home/pkgeval/.julia/packages/ADCME/94vEM/deps/CustomOps/build/libadcme.so. Please recompile the shared library by `ADCME.precompile()` for using custom operators. └ @ ADCME ~/.julia/packages/ADCME/94vEM/src/ADCME.jl:78 Python path=/home/pkgeval/.julia/adcme/bin/python PREFIXDIR=/home/pkgeval/.julia/adcme/lib/Libraries TF_INC=/home/pkgeval/.julia/adcme/lib/python3.7/site-packages/tensorflow_core/include TF_ABI=1 TF_LIB_FILE=/home/pkgeval/.julia/adcme/lib/python3.7/site-packages/tensorflow_core/libtensorflow_framework.so.1 Use openblas library /home/pkgeval/.julia/adcme/lib/libopenblas.so -- Configuring done -- Generating done -- Build files have been written to: /home/pkgeval/.julia/adcme/lib/Libraries/Adept-2/adept/build [1/12] Building CXX object CMakeFiles/adept.dir/StackStorageOrig.cpp.o [2/12] Building CXX object CMakeFiles/adept.dir/cppblas.cpp.o [3/12] Building CXX object CMakeFiles/adept.dir/settings.cpp.o [4/12] Building CXX object CMakeFiles/adept.dir/Storage.cpp.o [5/12] Building CXX object CMakeFiles/adept.dir/index.cpp.o [6/12] Building CXX object CMakeFiles/adept.dir/Array.cpp.o [7/12] Building CXX object CMakeFiles/adept.dir/Stack.cpp.o [8/12] Building CXX object CMakeFiles/adept.dir/inv.cpp.o [9/12] Building CXX object CMakeFiles/adept.dir/vector_utilities.cpp.o [10/12] Building CXX object CMakeFiles/adept.dir/jacobian.cpp.o [11/12] Building CXX object CMakeFiles/adept.dir/solve.cpp.o [12/12] Linking CXX shared library /home/pkgeval/.julia/adcme/lib/libadept.so [ Info: Made directory directory [ Info: Changed to directory /home/pkgeval/.julia/packages/ADCME/94vEM/deps/Plugin/ExtendedNN/build -- The C compiler identification is GNU 5.4.0 -- The CXX compiler identification is GNU 5.4.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /home/pkgeval/.julia/adcme/bin/x86_64-conda_cos6-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /home/pkgeval/.julia/adcme/bin/x86_64-conda_cos6-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done JULIA=/opt/julia/bin/julia Precompiling packages... Info Given ADCME was explicitly requested, output will be shown live  WARNING: method definition for #newton_raphson#39 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:462 declares type variable T but does not use it. WARNING: method definition for #newton_raphson_with_grad#49 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:616 declares type variable T but does not use it. WARNING: method definition for NonlinearConstrainedProblem at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:690 declares type variable T but does not use it. WARNING: Method definition size(PyCall.PyObject) in module PyCall at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/PyCall.jl:820 overwritten in module ADCME at /home/pkgeval/.julia/packages/ADCME/94vEM/src/variable.jl:214. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 10506.3 ms ? ADCME WARNING: method definition for #newton_raphson#39 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:462 declares type variable T but does not use it. WARNING: method definition for #newton_raphson_with_grad#49 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:616 declares type variable T but does not use it. WARNING: method definition for NonlinearConstrainedProblem at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:690 declares type variable T but does not use it. WARNING: Method definition size(PyCall.PyObject) in module PyCall at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/PyCall.jl:820 overwritten in module ADCME at /home/pkgeval/.julia/packages/ADCME/94vEM/src/variable.jl:214. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. WARNING: method definition for #newton_raphson#39 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:462 declares type variable T but does not use it. WARNING: method definition for #newton_raphson_with_grad#49 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:616 declares type variable T but does not use it. WARNING: method definition for NonlinearConstrainedProblem at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:690 declares type variable T but does not use it. OMP: Info #212: KMP_AFFINITY: decoding x2APIC ids. OMP: Info #210: KMP_AFFINITY: Affinity capable, using global cpuid leaf 11 info OMP: Info #154: KMP_AFFINITY: Initial OS proc set respected: 64 OMP: Info #156: KMP_AFFINITY: 1 available OS procs OMP: Info #157: KMP_AFFINITY: Uniform topology OMP: Info #159: KMP_AFFINITY: 1 packages x 1 cores/pkg x 1 threads/core (1 total cores) OMP: Info #214: KMP_AFFINITY: OS proc to physical thread map: OMP: Info #171: KMP_AFFINITY: OS proc 64 maps to package 0 OMP: Info #250: KMP_AFFINITY: pid 12062 tid 12062 thread 0 bound to OS proc set 64 ┌ Warning: Cannot load /home/pkgeval/.julia/packages/ADCME/94vEM/deps/CustomOps/build/libadcme.so. Please recompile the shared library by `ADCME.precompile()` for using custom operators. └ @ ADCME ~/.julia/packages/ADCME/94vEM/src/ADCME.jl:78 Python path=/home/pkgeval/.julia/adcme/bin/python PREFIXDIR=/home/pkgeval/.julia/adcme/lib/Libraries TF_INC=/home/pkgeval/.julia/adcme/lib/python3.7/site-packages/tensorflow_core/include TF_ABI=1 TF_LIB_FILE=/home/pkgeval/.julia/adcme/lib/python3.7/site-packages/tensorflow_core/libtensorflow_framework.so.1 ADEPT_LIB_FILE=/home/pkgeval/.julia/adcme/lib/libadept.so BLAS Library = /home/pkgeval/.julia/adcme/lib/libopenblas.so -- Configuring done -- Generating done -- Build files have been written to: /home/pkgeval/.julia/packages/ADCME/94vEM/deps/Plugin/ExtendedNN/build [1/2] Building CXX object CMakeFiles/ExtendedNn.dir/ExtendedNn.cpp.o [2/2] Linking CXX shared library libExtendedNn.so Load library operator (with gradient, multiple outputs = true): /home/pkgeval/.julia/packages/ADCME/94vEM/deps/Plugin/ExtendedNN/build/libExtendedNn.so ==> extended_nn Test Summary: | Pass Total Time fcx | 4 4 7m33.3s Test Summary: | Pass Total Time dropout | 2 2 0.9s [ Info: /home/pkgeval/.julia/packages/ADCME/94vEM/deps/CustomOps/build/libadcme.so does not exist. Precompiling... [ Info: Made directory directory [ Info: Changed to directory build -- The C compiler identification is GNU 5.4.0 -- The CXX compiler identification is GNU 5.4.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /home/pkgeval/.julia/adcme/bin/x86_64-conda_cos6-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /home/pkgeval/.julia/adcme/bin/x86_64-conda_cos6-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done JULIA=/opt/julia/bin/julia Precompiling packages... Info Given ADCME was explicitly requested, output will be shown live  WARNING: method definition for #newton_raphson#39 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:462 declares type variable T but does not use it. WARNING: method definition for #newton_raphson_with_grad#49 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:616 declares type variable T but does not use it. WARNING: method definition for NonlinearConstrainedProblem at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:690 declares type variable T but does not use it. WARNING: Method definition size(PyCall.PyObject) in module PyCall at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/PyCall.jl:820 overwritten in module ADCME at /home/pkgeval/.julia/packages/ADCME/94vEM/src/variable.jl:214. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 10143.3 ms ? ADCME WARNING: method definition for #newton_raphson#39 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:462 declares type variable T but does not use it. WARNING: method definition for #newton_raphson_with_grad#49 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:616 declares type variable T but does not use it. WARNING: method definition for NonlinearConstrainedProblem at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:690 declares type variable T but does not use it. WARNING: Method definition size(PyCall.PyObject) in module PyCall at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/PyCall.jl:820 overwritten in module ADCME at /home/pkgeval/.julia/packages/ADCME/94vEM/src/variable.jl:214. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. WARNING: method definition for #newton_raphson#39 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:462 declares type variable T but does not use it. WARNING: method definition for #newton_raphson_with_grad#49 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:616 declares type variable T but does not use it. WARNING: method definition for NonlinearConstrainedProblem at /home/pkgeval/.julia/packages/ADCME/94vEM/src/optim.jl:690 declares type variable T but does not use it. OMP: Info #212: KMP_AFFINITY: decoding x2APIC ids. OMP: Info #210: KMP_AFFINITY: Affinity capable, using global cpuid leaf 11 info OMP: Info #154: KMP_AFFINITY: Initial OS proc set respected: 64 OMP: Info #156: KMP_AFFINITY: 1 available OS procs OMP: Info #157: KMP_AFFINITY: Uniform topology OMP: Info #159: KMP_AFFINITY: 1 packages x 1 cores/pkg x 1 threads/core (1 total cores) OMP: Info #214: KMP_AFFINITY: OS proc to physical thread map: OMP: Info #171: KMP_AFFINITY: OS proc 64 maps to package 0 OMP: Info #250: KMP_AFFINITY: pid 12133 tid 12133 thread 0 bound to OS proc set 64 ┌ Warning: Cannot load /home/pkgeval/.julia/packages/ADCME/94vEM/deps/CustomOps/build/libadcme.so. Please recompile the shared library by `ADCME.precompile()` for using custom operators. └ @ ADCME ~/.julia/packages/ADCME/94vEM/src/ADCME.jl:78 Python path=/home/pkgeval/.julia/adcme/bin/python PREFIXDIR=/home/pkgeval/.julia/adcme/lib/Libraries TF_INC=/home/pkgeval/.julia/adcme/lib/python3.7/site-packages/tensorflow_core/include TF_ABI=1 TF_LIB_FILE=/home/pkgeval/.julia/adcme/lib/python3.7/site-packages/tensorflow_core/libtensorflow_framework.so.1 MPI_INCLUDE_PATH and/or MPI_C_LIBRARIES is not set. MPI operators are not compiled. -- Found OpenMP_C: -fopenmp (found version "4.0") -- Found OpenMP_CXX: -fopenmp (found version "4.0") -- Found OpenMP: TRUE (found version "4.0") OPENMP Found -- Configuring done -- Generating done -- Build files have been written to: /home/pkgeval/.julia/packages/ADCME/94vEM/deps/CustomOps/build [1/28] Building CXX object CMakeFiles/adcme.dir/RadialBasisFunction/Functions.cpp.o [2/28] Building CXX object CMakeFiles/adcme.dir/OT/src/sinkhorn.cpp.o [3/28] Building CXX object CMakeFiles/adcme.dir/RadialBasisFunction/Impl.cpp.o [4/28] Building CXX object CMakeFiles/adcme.dir/SleepFor/SleepFor.cpp.o [5/28] Building CXX object CMakeFiles/adcme.dir/PrintTensor/PrintTensor.cpp.o [6/28] Building CXX object CMakeFiles/adcme.dir/TriSolve/TriSolve.cpp.o [7/28] Building CXX object CMakeFiles/adcme.dir/SparseAccumulate/Impl.cpp.o [8/28] Building CXX object CMakeFiles/adcme.dir/SparseToDense/SparseToDense.cpp.o [9/28] Building CXX object CMakeFiles/adcme.dir/TriLu/TriLu.cpp.o [10/28] Building CXX object CMakeFiles/adcme.dir/SparseAccumulate/SparseAccumulator.cpp.o [11/28] Building CXX object CMakeFiles/adcme.dir/SparseFactorizationSolve/lru_cache.cpp.o [12/28] Building CXX object CMakeFiles/adcme.dir/RadialBasisFunction/RadialBasisFunction.cpp.o [13/28] Building CXX object CMakeFiles/adcme.dir/SparseConcate/SparseConcate.cpp.o [14/28] Building CXX object CMakeFiles/adcme.dir/SparseScatterUpdate/SparseScatterUpdate.cpp.o [15/28] Building CXX object CMakeFiles/adcme.dir/OT/SinkhornKnopp/SinkhornKnopp.cpp.o [16/28] Building CXX object CMakeFiles/adcme.dir/SparseIndexing/SparseIndexing.cpp.o [17/28] Building CXX object CMakeFiles/adcme.dir/SparseMatMul/SparseMatMul.cpp.o [18/28] Building CXX object CMakeFiles/adcme.dir/SparseFactorizationSolve/Solve/Solve.cpp.o [19/28] Building CXX object CMakeFiles/adcme.dir/RadialBasisFunction3D/Impl.cpp.o [20/28] Building CXX object CMakeFiles/adcme.dir/InterpDimOne/InterpDimOne.cpp.o [21/28] Building CXX object CMakeFiles/adcme.dir/SparseCompress/SparseCompress.cpp.o [22/28] Building CXX object CMakeFiles/adcme.dir/RollingFunctions/RollingFunctions.cpp.o [23/28] Building CXX object CMakeFiles/adcme.dir/RadialBasisFunction3D/RadialBasisFunctionThreeD.cpp.o [24/28] Building CXX object CMakeFiles/adcme.dir/SolveBatchedRhs/SolveBatchedRhs.cpp.o [25/28] Building CXX object CMakeFiles/adcme.dir/SparseFactorizationSolve/Factorization/SparseFactorization.cpp.o [26/28] Building CXX object CMakeFiles/adcme.dir/SparseLeastSquare/SparseLeastSquare.cpp.o [27/28] Building CXX object CMakeFiles/adcme.dir/SparseSolver/SparseSolver.cpp.o [28/28] Linking CXX shared library libadcme.so Test Summary: | Pass Total Time sparse_constructor | 7 7 4m53.2s Test Summary: | Pass Total Time sparse_arithmetic | 4 4 3.1s Test Summary: | Pass Total Time sparse_adjoint | 1 1 0.9s Test Summary: | Pass Total Time sparse_mul | 6 6 2.8s Test Summary: | Pass Total Time sparse_vcat_hcat | 2 2 3.0s Test Summary: | Pass Total Time sparse_indexing | 3 3 2.1s Test Summary: | Pass Total Time sparse_solve | 1 1 11.9s k = 1 k = 2 k = 3 k = 4 k = 5 k = 6 k = 7 k = 8 k = 9 k = 10 v = [0.8087131725507937, 0.024716477884836885, 0.0299959849995598, 0.46959788600961405, 0.18604024661618968, 0.24620398258594245, 0.2886964276249787, 0.34010208292137845, 0.13585284404691367, 0.004677074070057463] 2025-06-19 20:01:15.558935: I ../SparseAccumulate/Impl.cpp:68] Create a new sparse assembler [Handle ID = 100] with 20 rows and tolerance 0. 2025-06-19 20:01:15.558973: I ../SparseAccumulate/Impl.cpp:69] Current sparse assembler: 2025-06-19 20:01:15.558981: I ../SparseAccumulate/Impl.cpp:74] 100 | 2025-06-19 20:01:15.559022: I ../SparseAccumulate/Impl.cpp:82] destroy_sparse_assembler 2025-06-19 20:01:15.669610: I ../SparseAccumulate/Impl.cpp:68] Create a new sparse assembler [Handle ID = 100] with 5 rows and tolerance 1. 2025-06-19 20:01:15.669682: I ../SparseAccumulate/Impl.cpp:69] Current sparse assembler: 2025-06-19 20:01:15.669690: I ../SparseAccumulate/Impl.cpp:74] 100 | 2025-06-19 20:01:15.669710: I ../SparseAccumulate/Impl.cpp:82] destroy_sparse_assembler 2025-06-19 20:01:15.987442: I ../SparseAccumulate/Impl.cpp:68] Create a new sparse assembler [Handle ID = 100] with 5 rows and tolerance 0. 2025-06-19 20:01:15.987498: I ../SparseAccumulate/Impl.cpp:69] Current sparse assembler: 2025-06-19 20:01:15.987506: I ../SparseAccumulate/Impl.cpp:74] 100 | 2025-06-19 20:01:15.987543: I ../SparseAccumulate/Impl.cpp:82] destroy_sparse_assembler Test Summary: | Pass Total Time sparse_assembler | 3 3 1.5s ┌ Warning: `getindex(o::PyObject, i::Integer)` is deprecated, use `get(o, i - 1)` instead. │ caller = \(s::SparseTensor, o::PyObject, method::String) at sparse.jl:426 └ @ Core ~/.julia/packages/ADCME/94vEM/src/sparse.jl:426 Test Summary: | Pass Total Time sparse_least_square | 1 1 3.2s Test Summary: | Pass Total Time sparse mat mul | 3 3 1.5s Test Summary: | Pass Total Time spdiag | 3 3 1.2s Test Summary: | Pass Total Time spzero | 2 2 0.6s Test Summary: | Pass Total Time sparse indexing | 1 1 3.0s Test Summary: | Pass Total Time sum | 3 3 1.0s Test Summary: | Pass Total Time dense_to_sparse | 2 2 0.2s Test Summary: | Pass Total Time spdiagm | 4 4 1.7s Test Summary: | Pass Total Time hvcat | 1 1 3.1s Test Summary: | Pass Total Time find | 6 6 1.4s ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 11545 running 1 of 1 signal (10): User defined signal 1 lookdict_unicode_nodummy.lto_priv.1786 at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyDict_LoadGlobal at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalFrameDefault at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) function_code_fastcall at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyFunction_FastCallDict at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyObject_Call_Prepend at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyObject_FastCallDict at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) object_vacall at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) PyObject_CallFunctionObjArgs at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) slot_tp_getattr_hook at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalFrameDefault at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) function_code_fastcall at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyFunction_FastCallDict at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyObject_Call_Prepend at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) slot_tp_init at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) type_call.lto_priv.153 at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyObject_FastCallKeywords at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) call_function.lto_priv.1542 at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalFrameDefault at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) function_code_fastcall at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) call_function.lto_priv.1542 at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalFrameDefault at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) function_code_fastcall at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) call_function.lto_priv.1542 at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalFrameDefault at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) function_code_fastcall at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) call_function.lto_priv.1542 at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalFrameDefault at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalCodeWithName at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyFunction_FastCallDict at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyObject_Call_Prepend at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) slot_tp_init at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) type_call.lto_priv.153 at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyObject_FastCallKeywords at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) call_function.lto_priv.1542 at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalFrameDefault at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalCodeWithName at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyFunction_FastCallKeywords at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) call_function.lto_priv.1542 at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalFrameDefault at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalCodeWithName at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyFunction_FastCallDict at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalFrameDefault at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalCodeWithName at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyFunction_FastCallKeywords at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) call_function.lto_priv.1542 at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalFrameDefault at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalCodeWithName at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyFunction_FastCallKeywords at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) call_function.lto_priv.1542 at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalFrameDefault at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalCodeWithName at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyFunction_FastCallKeywords at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) call_function.lto_priv.1542 at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalFrameDefault at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalCodeWithName at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyFunction_FastCallKeywords at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) call_function.lto_priv.1542 at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalFrameDefault at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalCodeWithName at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyFunction_FastCallKeywords at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) call_function.lto_priv.1542 at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalFrameDefault at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalCodeWithName at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyFunction_FastCallDict at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalFrameDefault at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyEval_EvalCodeWithName at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) _PyFunction_FastCallDict at /home/pkgeval/.julia/adcme/lib/libpython3.7m.so.1.0 (unknown line) macro expansion at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/exception.jl:108 [inlined] #__pycall!##0 at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/pyfncall.jl:43 [inlined] disable_sigint at ./c.jl:167 [inlined] __pycall! at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/pyfncall.jl:42 [inlined] _pycall! at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/pyfncall.jl:29 _pycall! at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/pyfncall.jl:11 unknown function (ip: 0x736b560cd23d) at (unknown file) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 #_#74 at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/pyfncall.jl:86 _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2343 [inlined] jl_f__apply_iterate at /source/src/builtins.c:864 PyObject at /home/pkgeval/.julia/packages/PyCall/1gn3u/src/pyfncall.jl:86 _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 #adjoint#174 at /home/pkgeval/.julia/packages/ADCME/94vEM/src/ops.jl:492 adjoint at /home/pkgeval/.julia/packages/ADCME/94vEM/src/ops.jl:486 unknown function (ip: 0x736b5612c142) at (unknown file) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 find at /home/pkgeval/.julia/packages/ADCME/94vEM/src/sparse.jl:96 scatter_update at /home/pkgeval/.julia/packages/ADCME/94vEM/src/sparse.jl:359 unknown function (ip: 0x736b55f62b21) at (unknown file) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2343 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_body at /source/src/interpreter.c:581 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2846 _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 _include at ./loading.jl:2906 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 unknown function (ip: 0x736baec343e2) at (unknown file) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2343 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2846 _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 _include at ./loading.jl:2906 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_30481.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2343 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 exec_options at ./client.jl:290 _start at ./client.jl:557 jfptr__start_68643.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2343 [inlined] true_main at /source/src/jlapi.c:964 jl_repl_entrypoint at /source/src/jlapi.c:1132 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x736bb0153249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== Test Summary: | Pass ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1213 wait_forever at ./task.jl:1150 jfptr_wait_forever_36099.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2343 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000074751b89ce20 Total snapshots: 443. Utilization: 0% ╎443 @Base/task.jl:1150 wait_forever() 442╎ 443 @Base/task.jl:1213 wait() Total Time [11545] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/ADCME/94vEM/test/sparse.jl:294 _ZN4llvm16InstCombinerImpl15visitSelectInstERNS_10SelectInstE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm16InstCombinerImpl3runEv at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) PkgEval terminated after 2721.83s: test duration exceeded the time limit