Package evaluation of HiddenMarkovModels on Julia 1.13.0-DEV.725 (d6294ba973*) started at 2025-06-10T15:06:20.662 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.56s ################################################################################ # Installation # Installing HiddenMarkovModels... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [84ca31d5] + HiddenMarkovModels v0.7.0 Updating `~/.julia/environments/v1.13/Manifest.toml` [dce04be8] + ArgCheck v2.5.0 [d360d2e6] + ChainRulesCore v1.25.1 [34da2185] + Compat v4.16.0 [b429d917] + DensityInterface v0.4.0 [ffbed154] + DocStringExtensions v0.9.5 [1a297f60] + FillArrays v1.13.0 [84ca31d5] + HiddenMarkovModels v0.7.0 [34004b35] + HypergeometricFunctions v0.3.28 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [692b3bcd] + JLLWrappers v1.7.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [21216c6a] + Preferences v1.4.3 [189a3867] + Reexport v1.2.2 [79098fc4] + Rmath v0.8.0 [276daf66] + SpecialFunctions v2.5.1 [82ae8749] + StatsAPI v1.7.1 [4c63d2b9] + StatsFuns v1.5.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.12.0+0 Installation completed after 4.14s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... ERROR: LoadError: The following 5 direct dependencies failed to precompile: EnzymeLogExpFunctionsExt Failed to precompile EnzymeLogExpFunctionsExt [2cbbde57-e0f9-526f-9bad-0377a41e3da5] to "/home/pkgeval/.julia/compiled/v1.13/EnzymeLogExpFunctionsExt/jl_zxCplz" (ProcessExited(1)). ERROR: LoadError: UndefVarError: `verbose_stmt_info` not defined in `Compiler` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] getproperty(x::Module, f::Symbol) @ Base ./Base_compiler.jl:50 [2] top-level scope @ ~/.julia/packages/Enzyme/4oLyn/src/compiler/interpreter.jl:269 [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [4] top-level scope @ ~/.julia/packages/Enzyme/4oLyn/src/compiler.jl:1417 [5] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [6] top-level scope @ ~/.julia/packages/Enzyme/4oLyn/src/Enzyme.jl:137 [7] include(mod::Module, _path::String) @ Base ./Base.jl:309 [8] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3000 [9] top-level scope @ stdin:5 [10] eval(m::Module, e::Any) @ Core ./boot.jl:489 [11] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2846 [12] include_string @ ./loading.jl:2856 [inlined] [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:322 [14] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/Enzyme/4oLyn/src/compiler/interpreter.jl:1 in expression starting at /home/pkgeval/.julia/packages/Enzyme/4oLyn/src/compiler.jl:1 in expression starting at /home/pkgeval/.julia/packages/Enzyme/4oLyn/src/Enzyme.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Enzyme [7da242da-08ed-463a-9acd-ee780be4f1d9] to "/home/pkgeval/.julia/compiled/v1.13/Enzyme/jl_nCKjRl" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3287 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2652 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#232 @ ./reflection.jl:1282 [inlined] [8] invokelatest_gr @ ./reflection.jl:1274 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3858 [10] maybe_cachefile_lock @ ./loading.jl:3855 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2638 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2466 [13] macro expansion @ ./loading.jl:2394 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2359 [16] require @ ./loading.jl:2335 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [20] top-level scope @ ~/.julia/packages/Enzyme/4oLyn/ext/EnzymeLogExpFunctionsExt.jl:4 [21] include(mod::Module, _path::String) @ Base ./Base.jl:309 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3000 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2846 [26] include_string @ ./loading.jl:2856 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:322 [28] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/Enzyme/4oLyn/ext/EnzymeLogExpFunctionsExt.jl:1 in expression starting at stdin:5 EnzymeChainRulesCoreExt Failed to precompile EnzymeChainRulesCoreExt [3d64210b-5959-5fb4-bce6-6715fad0aae8] to "/home/pkgeval/.julia/compiled/v1.13/EnzymeChainRulesCoreExt/jl_pXQPj7" (ProcessExited(1)). ERROR: LoadError: UndefVarError: `verbose_stmt_info` not defined in `Compiler` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] getproperty(x::Module, f::Symbol) @ Base ./Base_compiler.jl:50 [2] top-level scope @ ~/.julia/packages/Enzyme/4oLyn/src/compiler/interpreter.jl:269 [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [4] top-level scope @ ~/.julia/packages/Enzyme/4oLyn/src/compiler.jl:1417 [5] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [6] top-level scope @ ~/.julia/packages/Enzyme/4oLyn/src/Enzyme.jl:137 [7] include(mod::Module, _path::String) @ Base ./Base.jl:309 [8] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3000 [9] top-level scope @ stdin:5 [10] eval(m::Module, e::Any) @ Core ./boot.jl:489 [11] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2846 [12] include_string @ ./loading.jl:2856 [inlined] [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:322 [14] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/Enzyme/4oLyn/src/compiler/interpreter.jl:1 in expression starting at /home/pkgeval/.julia/packages/Enzyme/4oLyn/src/compiler.jl:1 in expression starting at /home/pkgeval/.julia/packages/Enzyme/4oLyn/src/Enzyme.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Enzyme [7da242da-08ed-463a-9acd-ee780be4f1d9] to "/home/pkgeval/.julia/compiled/v1.13/Enzyme/jl_uihWRL" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3287 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2652 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#232 @ ./reflection.jl:1282 [inlined] [8] invokelatest_gr @ ./reflection.jl:1274 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3858 [10] maybe_cachefile_lock @ ./loading.jl:3855 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2638 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2466 [13] macro expansion @ ./loading.jl:2394 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2359 [16] require @ ./loading.jl:2335 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [20] top-level scope @ ~/.julia/packages/Enzyme/4oLyn/ext/EnzymeChainRulesCoreExt.jl:5 [21] include(mod::Module, _path::String) @ Base ./Base.jl:309 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3000 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2846 [26] include_string @ ./loading.jl:2856 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:322 [28] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/Enzyme/4oLyn/ext/EnzymeChainRulesCoreExt.jl:1 in expression starting at stdin:5 EnzymeSpecialFunctionsExt Failed to precompile EnzymeSpecialFunctionsExt [7685dddb-33e3-5e96-bcc8-848bc5a48302] to "/home/pkgeval/.julia/compiled/v1.13/EnzymeSpecialFunctionsExt/jl_7Yq8zw" (ProcessExited(1)). ERROR: LoadError: UndefVarError: `verbose_stmt_info` not defined in `Compiler` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] getproperty(x::Module, f::Symbol) @ Base ./Base_compiler.jl:50 [2] top-level scope @ ~/.julia/packages/Enzyme/4oLyn/src/compiler/interpreter.jl:269 [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [4] top-level scope @ ~/.julia/packages/Enzyme/4oLyn/src/compiler.jl:1417 [5] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [6] top-level scope @ ~/.julia/packages/Enzyme/4oLyn/src/Enzyme.jl:137 [7] include(mod::Module, _path::String) @ Base ./Base.jl:309 [8] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3000 [9] top-level scope @ stdin:5 [10] eval(m::Module, e::Any) @ Core ./boot.jl:489 [11] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2846 [12] include_string @ ./loading.jl:2856 [inlined] [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:322 [14] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/Enzyme/4oLyn/src/compiler/interpreter.jl:1 in expression starting at /home/pkgeval/.julia/packages/Enzyme/4oLyn/src/compiler.jl:1 in expression starting at /home/pkgeval/.julia/packages/Enzyme/4oLyn/src/Enzyme.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Enzyme [7da242da-08ed-463a-9acd-ee780be4f1d9] to "/home/pkgeval/.julia/compiled/v1.13/Enzyme/jl_P1Vgrv" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3287 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2652 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#232 @ ./reflection.jl:1282 [inlined] [8] invokelatest_gr @ ./reflection.jl:1274 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3858 [10] maybe_cachefile_lock @ ./loading.jl:3855 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2638 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2466 [13] macro expansion @ ./loading.jl:2394 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2359 [16] require @ ./loading.jl:2335 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [20] top-level scope @ ~/.julia/packages/Enzyme/4oLyn/ext/EnzymeSpecialFunctionsExt.jl:4 [21] include(mod::Module, _path::String) @ Base ./Base.jl:309 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3000 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2846 [26] include_string @ ./loading.jl:2856 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:322 [28] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/Enzyme/4oLyn/ext/EnzymeSpecialFunctionsExt.jl:1 in expression starting at stdin:5 Enzyme Failed to precompile Enzyme [7da242da-08ed-463a-9acd-ee780be4f1d9] to "/home/pkgeval/.julia/compiled/v1.13/Enzyme/jl_YjrkEz" (ProcessExited(1)). ERROR: LoadError: UndefVarError: `verbose_stmt_info` not defined in `Compiler` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] getproperty(x::Module, f::Symbol) @ Base ./Base_compiler.jl:50 [2] top-level scope @ ~/.julia/packages/Enzyme/4oLyn/src/compiler/interpreter.jl:269 [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [4] top-level scope @ ~/.julia/packages/Enzyme/4oLyn/src/compiler.jl:1417 [5] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [6] top-level scope @ ~/.julia/packages/Enzyme/4oLyn/src/Enzyme.jl:137 [7] include(mod::Module, _path::String) @ Base ./Base.jl:309 [8] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3000 [9] top-level scope @ stdin:5 [10] eval(m::Module, e::Any) @ Core ./boot.jl:489 [11] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2846 [12] include_string @ ./loading.jl:2856 [inlined] [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:322 [14] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/Enzyme/4oLyn/src/compiler/interpreter.jl:1 in expression starting at /home/pkgeval/.julia/packages/Enzyme/4oLyn/src/compiler.jl:1 in expression starting at /home/pkgeval/.julia/packages/Enzyme/4oLyn/src/Enzyme.jl:1 in expression starting at stdin:5 EnzymeGPUArraysCoreExt Failed to precompile EnzymeGPUArraysCoreExt [b0760466-a0dd-53b2-99ee-2e0a1dbc83d2] to "/home/pkgeval/.julia/compiled/v1.13/EnzymeGPUArraysCoreExt/jl_RJJs8O" (ProcessExited(1)). ERROR: LoadError: UndefVarError: `verbose_stmt_info` not defined in `Compiler` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] getproperty(x::Module, f::Symbol) @ Base ./Base_compiler.jl:50 [2] top-level scope @ ~/.julia/packages/Enzyme/4oLyn/src/compiler/interpreter.jl:269 [3] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [4] top-level scope @ ~/.julia/packages/Enzyme/4oLyn/src/compiler.jl:1417 [5] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [6] top-level scope @ ~/.julia/packages/Enzyme/4oLyn/src/Enzyme.jl:137 [7] include(mod::Module, _path::String) @ Base ./Base.jl:309 [8] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3000 [9] top-level scope @ stdin:5 [10] eval(m::Module, e::Any) @ Core ./boot.jl:489 [11] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2846 [12] include_string @ ./loading.jl:2856 [inlined] [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:322 [14] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/Enzyme/4oLyn/src/compiler/interpreter.jl:1 in expression starting at /home/pkgeval/.julia/packages/Enzyme/4oLyn/src/compiler.jl:1 in expression starting at /home/pkgeval/.julia/packages/Enzyme/4oLyn/src/Enzyme.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Enzyme [7da242da-08ed-463a-9acd-ee780be4f1d9] to "/home/pkgeval/.julia/compiled/v1.13/Enzyme/jl_4KTy2d" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3287 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2652 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [7] #invokelatest_gr#232 @ ./reflection.jl:1282 [inlined] [8] invokelatest_gr @ ./reflection.jl:1274 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3858 [10] maybe_cachefile_lock @ ./loading.jl:3855 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2638 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2466 [13] macro expansion @ ./loading.jl:2394 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2359 [16] require @ ./loading.jl:2335 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [20] top-level scope @ ~/.julia/packages/Enzyme/4oLyn/ext/EnzymeGPUArraysCoreExt.jl:4 [21] include(mod::Module, _path::String) @ Base ./Base.jl:309 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3000 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2846 [26] include_string @ ./loading.jl:2856 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:322 [28] _start() @ Base ./client.jl:557 in expression starting at /home/pkgeval/.julia/packages/Enzyme/4oLyn/ext/EnzymeGPUArraysCoreExt.jl:1 in expression starting at stdin:5 in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 2094.41s ################################################################################ # Testing # Testing HiddenMarkovModels Status `/tmp/jl_J9Dnnc/Project.toml` [4c88cf16] Aqua v0.8.13 [b0b7db55] ComponentArrays v0.15.27 [b429d917] DensityInterface v0.4.0 [31c24e10] Distributions v0.25.120 [e30172f5] Documenter v1.12.0 [7da242da] Enzyme v0.13.49 [f6369f11] ForwardDiff v1.0.1 [84ca31d5] HiddenMarkovModels v0.7.0 [c3a54625] JET v0.10.6 [98e50ef6] JuliaFormatter v2.1.2 [aa2f6b4e] LogarithmicNumbers v1.4.1 [eff96d63] Measurements v2.12.0 [860ef19b] StableRNGs v1.0.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [e88e6eb3] Zygote v0.7.9 [37e2e46d] LinearAlgebra v1.12.0 [44cfe95a] Pkg v1.13.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.12.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_J9Dnnc/Manifest.toml` [a4c015fc] ANSIColoredPrinters v0.0.1 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [4c88cf16] Aqua v0.8.13 [dce04be8] ArgCheck v2.5.0 [4fba245c] ArrayInterface v7.19.0 [fa961155] CEnum v0.5.0 [49dc2e85] Calculus v0.5.2 [082447d4] ChainRules v1.72.4 [d360d2e6] ChainRulesCore v1.25.1 [da1fd8a2] CodeTracking v1.3.9 [944b1d66] CodecZlib v0.7.8 [a80b9123] CommonMark v0.9.1 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.16.0 [807dbc54] Compiler v0.1.0 [b0b7db55] ComponentArrays v0.15.27 [187b0558] ConstructionBase v1.5.8 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [b429d917] DensityInterface v0.4.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.5 [e30172f5] Documenter v1.12.0 [7da242da] Enzyme v0.13.49 [f151be2c] EnzymeCore v0.8.11 [e2ba6199] ExprTools v0.1.10 [1a297f60] FillArrays v1.13.0 [f6369f11] ForwardDiff v1.0.1 [d9f16b24] Functors v0.5.2 [46192b85] GPUArraysCore v0.2.0 [61eb1bfa] GPUCompiler v1.5.2 [d7ba0133] Git v1.4.0 [c27321d9] Glob v1.3.1 [84ca31d5] HiddenMarkovModels v0.7.0 [34004b35] HypergeometricFunctions v0.3.28 [b5f81e59] IOCapture v0.2.5 [7869d1d1] IRTools v0.4.14 [615f187c] IfElse v0.1.1 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.4 [82899510] IteratorInterfaceExtensions v1.0.0 [c3a54625] JET v0.10.6 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [98e50ef6] JuliaFormatter v2.1.2 [aa1ae85d] JuliaInterpreter v0.10.3 ⌅ [70703baa] JuliaSyntax v0.4.10 [929cbde3] LLVM v9.4.0 [0e77f7df] LazilyInitializedFields v1.3.0 [2ab3a3ac] LogExpFunctions v0.3.29 [aa2f6b4e] LogarithmicNumbers v1.4.1 [6f1432cf] LoweredCodeUtils v3.3.0 [1914dd2f] MacroTools v0.5.16 [d0879d2d] MarkdownAST v0.1.2 [eff96d63] Measurements v2.12.0 [e1d29d7a] Missings v1.2.0 [77ba4419] NaNMath v1.1.3 [d8793406] ObjectFile v0.4.4 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.35 [69de0a69] Parsers v2.8.3 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [c1ae055f] RealDot v0.1.0 [189a3867] Reexport v1.2.2 [2792f1a3] RegistryInstances v0.1.0 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.8.0 [6c6a2e73] Scratch v1.2.1 [a2af1166] SortingAlgorithms v1.2.1 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.5.1 [860ef19b] StableRNGs v1.0.3 [aedffcd0] Static v1.2.0 [0d7ed370] StaticArrayInterface v1.8.0 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.5 [4c63d2b9] StatsFuns v1.5.0 [09ab397b] StructArrays v0.7.1 [53d494c1] StructIO v0.3.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [e689c965] Tracy v0.1.4 [3bb67fe8] TranscodingStreams v0.11.3 [e88e6eb3] Zygote v0.7.9 [700de1a5] ZygoteRules v0.2.7 ⌅ [7cc45869] Enzyme_jll v0.0.181+0 [2e619515] Expat_jll v2.6.5+0 [f8c6e375] Git_jll v2.49.0+0 [dad2f222] LLVMExtra_jll v0.0.36+0 [ad6e5548] LibTracyClient_jll v0.9.1+6 [94ce4f54] Libiconv_jll v1.18.0+0 [9bd350c2] OpenSSH_jll v10.0.1+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.12.1+1 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.5.20 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.0+0 [efcefdf7] PCRE2_jll v10.44.0+1 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.12.0+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... 15692.2 ms ✓ HiddenMarkovModels 1 dependency successfully precompiled in 16 seconds. 45 already precompiled. Precompiling packages... 10682.0 ms ✓ JET 1 dependency successfully precompiled in 11 seconds. 35 already precompiled. Precompiling packages... 13140.4 ms ✓ CommonMark 59757.4 ms ✓ JuliaFormatter 2 dependencies successfully precompiled in 73 seconds. 8 already precompiled. Resolving package versions... Updating `/tmp/jl_J9Dnnc/Project.toml` [619c5ee3] + HMMTest v0.1.0 `~/.julia/packages/HiddenMarkovModels/Kmgf4/libs/HMMTest` Updating `/tmp/jl_J9Dnnc/Manifest.toml` [6e4b80f9] + BenchmarkTools v1.6.0 [619c5ee3] + HMMTest v0.1.0 `~/.julia/packages/HiddenMarkovModels/Kmgf4/libs/HMMTest` [9abbd945] + Profile v1.11.0 Precompiling packages... 5739.3 ms ✓ StatsBase 14219.4 ms ✓ Distributions 2 dependencies successfully precompiled in 21 seconds. 45 already precompiled. Precompiling packages... 3616.7 ms ✓ HiddenMarkovModels → HiddenMarkovModelsDistributionsExt 3506.5 ms ✓ Distributions → DistributionsTestExt 3605.8 ms ✓ Distributions → DistributionsChainRulesCoreExt 3276.7 ms ✓ Distributions → DistributionsDensityInterfaceExt 4 dependencies successfully precompiled in 15 seconds. 62 already precompiled. Precompiling packages... 1419.5 ms ✓ StructArrays 1866.0 ms ✓ ZygoteRules 9500.1 ms ✓ ForwardDiff 1172.9 ms ✓ StructArrays → StructArraysAdaptExt 1266.7 ms ✓ StructArrays → StructArraysLinearAlgebraExt 1764.3 ms ✓ StructArrays → StructArraysSparseArraysExt 12657.5 ms ✓ ChainRules 66664.2 ms ✓ Zygote 8 dependencies successfully precompiled in 97 seconds. 58 already precompiled. Code linting: JET-test failed at /home/pkgeval/.julia/packages/JET/z9poX/src/JETBase.jl:1055 Expression: (JET.report_package)(HiddenMarkovModels; toplevel_logger = nothing, target_defined_modules = true) ═════ 45 toplevel errors found ═════ ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/HiddenMarkovModels.jl:12 │ ArgumentError: Package ArgCheck not found in current path. │ - Run `import Pkg; Pkg.add("ArgCheck")` to install the ArgCheck package. │ Stacktrace: │ [1] macro expansion │ @ ./loading.jl:2376 [inlined] │ [2] macro expansion │ @ ./lock.jl:376 [inlined] │ [3] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2359 │ [4] require │ @ ./loading.jl:2335 [inlined] │ [5] eval_import_path │ @ ./module.jl:36 [inlined] │ [6] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base ./module.jl:60 │ [7] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr}) │ @ Base ./module.jl:101 └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/HiddenMarkovModels.jl:15 │ ArgumentError: Package ChainRulesCore not found in current path. │ - Run `import Pkg; Pkg.add("ChainRulesCore")` to install the ChainRulesCore package. │ Stacktrace: │ [1] macro expansion │ @ ./loading.jl:2376 [inlined] │ [2] macro expansion │ @ ./lock.jl:376 [inlined] │ [3] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2359 │ [4] require │ @ ./loading.jl:2335 [inlined] │ [5] eval_import_path │ @ ./module.jl:36 [inlined] │ [6] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base ./module.jl:60 │ [7] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr}) │ @ Base ./module.jl:101 └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/HiddenMarkovModels.jl:17 │ ArgumentError: Package DocStringExtensions not found in current path. │ - Run `import Pkg; Pkg.add("DocStringExtensions")` to install the DocStringExtensions package. │ Stacktrace: │ [1] macro expansion │ @ ./loading.jl:2376 [inlined] │ [2] macro expansion │ @ ./lock.jl:376 [inlined] │ [3] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2359 │ [4] require │ @ ./loading.jl:2335 [inlined] │ [5] eval_import_path │ @ ./module.jl:36 [inlined] │ [6] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base ./module.jl:60 │ [7] _eval_using(to::Module, path::Expr) │ @ Base ./module.jl:137 └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/HiddenMarkovModels.jl:18 │ ArgumentError: Package FillArrays not found in current path. │ - Run `import Pkg; Pkg.add("FillArrays")` to install the FillArrays package. │ Stacktrace: │ [1] macro expansion │ @ ./loading.jl:2376 [inlined] │ [2] macro expansion │ @ ./lock.jl:376 [inlined] │ [3] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2359 │ [4] require │ @ ./loading.jl:2335 [inlined] │ [5] eval_import_path │ @ ./module.jl:36 [inlined] │ [6] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base ./module.jl:60 │ [7] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr}) │ @ Base ./module.jl:101 └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/HiddenMarkovModels.jl:23 │ ArgumentError: Package StatsFuns not found in current path. │ - Run `import Pkg; Pkg.add("StatsFuns")` to install the StatsFuns package. │ Stacktrace: │ [1] macro expansion │ @ ./loading.jl:2376 [inlined] │ [2] macro expansion │ @ ./lock.jl:376 [inlined] │ [3] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2359 │ [4] require │ @ ./loading.jl:2335 [inlined] │ [5] eval_import_path │ @ ./module.jl:36 [inlined] │ [6] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base ./module.jl:60 │ [7] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr}) │ @ Base ./module.jl:101 └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/types/abstract_hmm.jl:130 │ LoadError: UndefVarError: `@argcheck` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in ArgCheck. │ Stacktrace: │ [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) │ @ Base ./flfrontend.jl:24 │ in expression starting at /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/types/abstract_hmm.jl:137 └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/utils/linalg.jl:28 │ LoadError: UndefVarError: `@argcheck` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in ArgCheck. │ Stacktrace: │ [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) │ @ Base ./flfrontend.jl:24 │ in expression starting at /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/utils/linalg.jl:31 └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/utils/linalg.jl:48 │ UndefVarError: `@argcheck` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in ArgCheck. │ Stacktrace: │ [1] #macroexpand#23 │ @ ./expr.jl:126 [inlined] │ [2] macroexpand │ @ ./expr.jl:124 [inlined] │ [3] docm │ @ ./docs/Docs.jl:647 [inlined] │ [4] docm(source::LineNumberNode, mod::Module, meta::Any, ex::Any) │ @ Base.Docs ./docs/Docs.jl:647 │ [5] (::DocStringExtensions.var"#hook!##0#hook!##1"{typeof(DocStringExtensions.template_hook)})(::LineNumberNode, ::Vararg{Any}) │ @ DocStringExtensions ~/.julia/packages/DocStringExtensions/zNis6/src/templates.jl:11 │ [6] var"@doc"(__source__::LineNumberNode, __module__::Module, x::Vararg{Any}) │ @ Core ./boot.jl:763 └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/utils/linalg.jl:75 │ LoadError: UndefVarError: `@argcheck` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in ArgCheck. │ Stacktrace: │ [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) │ @ Base ./flfrontend.jl:24 │ in expression starting at /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/utils/linalg.jl:81 └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/utils/fit.jl:1 │ UndefVarError: `SIGNATURES` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in DocStringExtensions. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/utils/lightdiagnormal.jl:1 │ UndefVarError: `TYPEDEF` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in DocStringExtensions. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/utils/lightdiagnormal.jl:23 │ LoadError: UndefVarError: `@argcheck` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in ArgCheck. │ Stacktrace: │ [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) │ @ Base ./flfrontend.jl:24 │ in expression starting at /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/utils/lightdiagnormal.jl:25 └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/utils/lightdiagnormal.jl:55 │ LoadError: UndefVarError: `@argcheck` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in ArgCheck. │ Stacktrace: │ [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) │ @ Base ./flfrontend.jl:24 │ in expression starting at /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/utils/lightdiagnormal.jl:70 └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/utils/lightcategorical.jl:1 │ UndefVarError: `TYPEDEF` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in DocStringExtensions. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/utils/lightcategorical.jl:19 │ LoadError: UndefVarError: `@argcheck` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in ArgCheck. │ Stacktrace: │ [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) │ @ Base ./flfrontend.jl:24 │ in expression starting at /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/utils/lightcategorical.jl:20 └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/utils/lightcategorical.jl:50 │ LoadError: UndefVarError: `@argcheck` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in ArgCheck. │ Stacktrace: │ [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) │ @ Base ./flfrontend.jl:24 │ in expression starting at /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/utils/lightcategorical.jl:53 └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/utils/limits.jl:1 │ UndefVarError: `SIGNATURES` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in DocStringExtensions. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/inference/forward.jl:1 │ UndefVarError: `TYPEDEF` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in DocStringExtensions. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/inference/forward.jl:19 │ UndefVarError: `TYPEDEF` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in DocStringExtensions. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/inference/forward.jl:48 │ UndefVarError: `SIGNATURES` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in DocStringExtensions. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/inference/forward.jl:88 │ LoadError: UndefVarError: `@argcheck` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in ArgCheck. │ Stacktrace: │ [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) │ @ Base ./flfrontend.jl:24 │ in expression starting at /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/inference/forward.jl:116 └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/inference/forward.jl:120 │ UndefVarError: `SIGNATURES` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in DocStringExtensions. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/inference/forward.jl:143 │ UndefVarError: `SIGNATURES` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in DocStringExtensions. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/inference/viterbi.jl:1 │ UndefVarError: `TYPEDEF` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in DocStringExtensions. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/inference/viterbi.jl:20 │ UndefVarError: `SIGNATURES` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in DocStringExtensions. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/inference/viterbi.jl:39 │ LoadError: UndefVarError: `@argcheck` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in ArgCheck. │ Stacktrace: │ [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) │ @ Base ./flfrontend.jl:24 │ in expression starting at /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/inference/viterbi.jl:72 └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/inference/viterbi.jl:76 │ UndefVarError: `SIGNATURES` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in DocStringExtensions. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/inference/viterbi.jl:98 │ UndefVarError: `SIGNATURES` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in DocStringExtensions. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/inference/forward_backward.jl:1 │ UndefVarError: `SIGNATURES` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in DocStringExtensions. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/inference/forward_backward.jl:74 │ UndefVarError: `SIGNATURES` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in DocStringExtensions. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/inference/forward_backward.jl:101 │ UndefVarError: `SIGNATURES` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in DocStringExtensions. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/inference/baum_welch.jl:16 │ UndefVarError: `SIGNATURES` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in DocStringExtensions. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/inference/baum_welch.jl:41 │ UndefVarError: `SIGNATURES` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in DocStringExtensions. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/inference/logdensity.jl:1 │ UndefVarError: `SIGNATURES` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in DocStringExtensions. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/inference/logdensity.jl:16 │ UndefVarError: `SIGNATURES` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in DocStringExtensions. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/HiddenMarkovModels.jl:47 │ UndefVarError: `ChainRulesCore` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: ChainRulesCore is loaded but not imported in the active module │ Stacktrace: │ [1] #invokelatest_gr#232 │ @ ./reflection.jl:1280 [inlined] │ [2] invokelatest_gr │ @ ./reflection.jl:1274 [inlined] │ [3] lookup_stmt(stmts::Vector{Any}, arg::Any) │ @ JuliaInterpreter ~/.julia/packages/JuliaInterpreter/41lEl/src/optimize.jl:21 │ [4] JuliaInterpreter.FrameCode(scope::Module, src::Core.CodeInfo; generator::Bool, optimize::Bool) │ @ JuliaInterpreter ~/.julia/packages/JuliaInterpreter/41lEl/src/types.jl:183 │ [5] FrameCode │ @ ~/.julia/packages/JuliaInterpreter/41lEl/src/types.jl:174 [inlined] │ [6] #Frame#3 │ @ ~/.julia/packages/JuliaInterpreter/41lEl/src/types.jl:330 [inlined] │ [7] Frame │ @ ~/.julia/packages/JuliaInterpreter/41lEl/src/types.jl:329 [inlined] │ [8] _virtual_process!(res::JET.VirtualProcessResult, toplevelex::Expr, filename::String, analyzer::JET.JETAnalyzer{JET.BasicPass}, config::JET.ToplevelConfig, context::Module, pkg_mod_depth::Int64; force_concretize::Bool, lnnref::Base.RefValue{LineNumberNode}) │ @ JET ~/.julia/packages/JET/z9poX/src/toplevel/virtualprocess.jl:917 │ [9] _virtual_process! │ @ ~/.julia/packages/JET/z9poX/src/toplevel/virtualprocess.jl:683 [inlined] │ [10] _virtual_process!(res::JET.VirtualProcessResult, s::String, filename::String, analyzer::JET.JETAnalyzer{JET.BasicPass}, config::JET.ToplevelConfig, context::Module, pkg_mod_depth::Int64) │ @ JET ~/.julia/packages/JET/z9poX/src/toplevel/virtualprocess.jl:666 │ [11] handle_include(interp::JET.ConcreteInterpreter{JET.var"#usemodule_with_err_handling#64"{Base.RefValue{LineNumberNode}, String, JET.ToplevelConfig, Int64, Set{Symbol}, JET.var"#general_err_handler#54"{Base.RefValue{LineNumberNode}, String}}, JET.JETAnalyzer{JET.BasicPass}}, include_func::Any, args::Vector{Any}) │ @ JET ~/.julia/packages/JET/z9poX/src/toplevel/virtualprocess.jl:1574 └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/types/hmm.jl:1 │ UndefVarError: `@argcheck` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in ArgCheck. │ Stacktrace: │ [1] #macroexpand#23 │ @ ./expr.jl:126 [inlined] │ [2] macroexpand │ @ ./expr.jl:124 [inlined] │ [3] docm │ @ ./docs/Docs.jl:647 [inlined] │ [4] docm(source::LineNumberNode, mod::Module, meta::Any, ex::Any) │ @ Base.Docs ./docs/Docs.jl:647 │ [5] (::DocStringExtensions.var"#hook!##0#hook!##1"{typeof(DocStringExtensions.template_hook)})(::LineNumberNode, ::Vararg{Any}) │ @ DocStringExtensions ~/.julia/packages/DocStringExtensions/zNis6/src/templates.jl:11 │ [6] var"@doc"(__source__::LineNumberNode, __module__::Module, x::Vararg{Any}) │ @ Core ./boot.jl:763 └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/types/hmm.jl:41 │ UndefVarError: `HMM` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in HiddenMarkovModels. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/types/hmm.jl:48 │ UndefVarError: `HMM` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in HiddenMarkovModels. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/types/hmm.jl:49 │ UndefVarError: `HMM` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in HiddenMarkovModels. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/types/hmm.jl:50 │ UndefVarError: `HMM` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in HiddenMarkovModels. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/types/hmm.jl:51 │ UndefVarError: `HMM` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in HiddenMarkovModels. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/types/hmm.jl:52 │ UndefVarError: `HMM` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in HiddenMarkovModels. └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/types/hmm.jl:56 │ LoadError: UndefVarError: `@argcheck` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in ArgCheck. │ Stacktrace: │ [1] fl_lower(ex::Expr, mod::Module, filename::String, lineno::Int64, world::UInt64, warn::Bool) │ @ Base ./flfrontend.jl:24 │ in expression starting at /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/types/hmm.jl:100 └─────────────────────── ┌ @ /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/src/HiddenMarkovModels.jl:49 │ UndefVarError: `EXPORTS` not defined in `HiddenMarkovModels` │ Suggestion: check for spelling errors or missing imports. │ Hint: a global variable of this name also exists in DocStringExtensions. └─────────────────────── Precompiling packages... 920.3 ms ✓ ArrayInterface → ArrayInterfaceChainRulesCoreExt 2303.0 ms ✓ ComponentArrays 2 dependencies successfully precompiled in 4 seconds. 22 already precompiled. Precompiling packages... 2110.9 ms ✓ ArrayInterface → ArrayInterfaceChainRulesExt 1 dependency successfully precompiled in 2 seconds. 40 already precompiled. Precompiling packages... 5822.4 ms ✓ ComponentArrays → ComponentArraysZygoteExt 1 dependency successfully precompiled in 6 seconds. 78 already precompiled. Precompiling packages... Info Given Enzyme was explicitly requested, output will be shown live   ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ======================================================================================  cmd: /opt/julia/bin/julia 295 running 1 of 1  signal (10): User defined signal 1 fl_memq at /source/src/flisp/builtins.c:82 apply_cl at /source/src/flisp/flisp.c:1174 _applyn at /source/src/flisp/flisp.c:679 [inlined] fl_foreach at /source/src/flisp/flisp.c:2276 apply_cl at /source/src/flisp/flisp.c:1174 _applyn at /source/src/flisp/flisp.c:679 [inlined] fl_foreach at /source/src/flisp/flisp.c:2276 apply_cl at /source/src/flisp/flisp.c:1174 _applyn at /source/src/flisp/flisp.c:679 [inlined] fl_foreach at /source/src/flisp/flisp.c:2276 apply_cl at /source/src/flisp/flisp.c:1174 _applyn at /source/src/flisp/flisp.c:679 [inlined] fl_foreach at /source/src/flisp/flisp.c:2276 apply_cl at /source/src/flisp/flisp.c:1174 _applyn at /source/src/flisp/flisp.c:679 [inlined] fl_foreach at /source/src/flisp/flisp.c:2276 apply_cl at /source/src/flisp/flisp.c:1174 _applyn at /source/src/flisp/flisp.c:679 fl_map1 at /source/src/flisp/flisp.c:2217 [inlined] fl_map1 at /source/src/flisp/flisp.c:2192 apply_cl at /source/src/flisp/flisp.c:1224 _applyn at /source/src/flisp/flisp.c:679 fl_map1 at /source/src/flisp/flisp.c:2217 [inlined] fl_map1 at /source/src/flisp/flisp.c:2192 apply_cl at /source/src/flisp/flisp.c:1224 do_trycatch at /source/src/flisp/flisp.c:895 apply_cl at /source/src/flisp/flisp.c:1804 do_trycatch at /source/src/flisp/flisp.c:895 apply_cl at /source/src/flisp/flisp.c:1804 _applyn at /source/src/flisp/flisp.c:679 fl_applyn at /source/src/flisp/flisp.c:719 jl_fl_lower at /source/src/ast.c:1287 fl_lower at ./flfrontend.jl:24 jfptr_fl_lower_53062.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2340 [inlined] ijl_lower at /source/src/ast.c:1347 jl_toplevel_eval_flex at /source/src/toplevel.c:653 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 EvalInto at ./boot.jl:494 [inlined] top-level scope at /home/pkgeval/.julia/packages/Enzyme/4oLyn/src/rules/jitrules.jl:1758 _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_invoke at /source/src/gf.c:3699 jl_toplevel_eval_flex at /source/src/toplevel.c:762 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2846 _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 _include at ./loading.jl:2906 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_35343.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2340 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2846 _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 _include at ./loading.jl:2906 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_35343.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2340 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_eval_module_expr at /source/src/toplevel.c:196 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:658 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2846 _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 _include at ./loading.jl:2906 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_35343.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2340 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_eval_module_expr at /source/src/toplevel.c:196 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:658 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2846 _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 _include at ./loading.jl:2906 include at ./Base.jl:309 include_package_for_output at ./loading.jl:3000 jfptr_include_package_for_output_76784.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2340 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:708 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:773 jl_toplevel_eval_flex at /source/src/toplevel.c:713 ijl_toplevel_eval at /source/src/toplevel.c:785 ijl_toplevel_eval_in at /source/src/toplevel.c:830 eval at ./boot.jl:489 include_string at ./loading.jl:2846 include_string at ./loading.jl:2856 [inlined] exec_options at ./client.jl:322 _start at ./client.jl:557 jfptr__start_48412.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2340 [inlined] true_main at /source/src/jlapi.c:964 jl_repl_entrypoint at /source/src/jlapi.c:1132 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x76054f0a3249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file)  ============================================================== Profile collected. A report will print at the next yield point ==============================================================  ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 163 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1213 wait_forever at ./task.jl:1150 jfptr_wait_forever_48494.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2340 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1213 wait_forever at ./task.jl:1150 jfptr_wait_forever_48494.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3692 [inlined] ijl_apply_generic at /source/src/gf.c:3892 jl_apply at /source/src/julia.h:2340 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x0000740930810790 Total snapshots: 165. Utilization: 0% ╎165 @Base/task.jl:1150 wait_forever() 164╎ 165 @Base/task.jl:1213 wait() [163] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/HiddenMarkovModels/Kmgf4/examples/autodiff.jl:10 _ZN4llvm7hashing6detail10hash_shortEPKcmm at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm12hash_combineIJjmEEENS_9hash_codeEDpRKT_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm12DenseMapInfoINS_5APIntEvE12getHashValueERKS1_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm12DenseMapBaseINS_8DenseMapINS_5APIntESt10unique_ptrINS_11ConstantIntESt14default_deleteIS4_EENS_12DenseMapInfoIS2_vEENS_6detail12DenseMapPairIS2_S7_EEEES2_S7_S9_SC_E15LookupBucketForIS2_EEbRKT_RPSC_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm11ConstantInt3getERNS_11LLVMContextERKNS_5APIntE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm11ConstantInt3getEPNS_4TypeERKNS_5APIntE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm23ObjectSizeOffsetVisitor13visitCallBaseERNS_8CallBaseE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) PkgEval terminated after 2766.41s: test duration exceeded the time limit