Package evaluation of VIDA on Julia 1.13.0-DEV.717 (51214a7524*) started at 2025-06-09T00:52:10.419 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.65s ################################################################################ # Installation # Installing VIDA... Resolving package versions... Installed CompositionsBase ──────────── v0.1.2 Installed MicroCollections ──────────── v0.2.0 Installed MacroTools ────────────────── v0.5.16 Installed CommonWorldInvalidations ──── v1.0.0 Installed ForwardDiff ───────────────── v1.0.1 Installed DataStructures ────────────── v0.18.22 Installed DefineSingletons ──────────── v0.1.2 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed NameResolution ────────────── v0.1.5 Installed DiffResults ───────────────── v1.1.0 Installed FillArrays ────────────────── v1.13.0 Installed Bzip2_jll ─────────────────── v1.0.9+0 Installed PaddedViews ───────────────── v0.5.12 Installed HypercubeTransform ────────── v0.4.4 Installed FLoops ────────────────────── v0.2.2 Installed ComponentArrays ───────────── v0.15.27 Installed Adapt ─────────────────────── v4.3.0 Installed Tricks ────────────────────── v0.1.10 Installed Extents ───────────────────── v0.1.6 Installed VIDA ──────────────────────── v0.13.1 Installed PolarizedTypes ────────────── v0.1.2 Installed ConstructionBase ──────────── v1.5.8 Installed HypergeometricFunctions ───── v0.3.28 Installed libaec_jll ────────────────── v1.1.3+0 Installed ContextVariablesX ─────────── v0.1.3 Installed MKL_jll ───────────────────── v2025.0.1+1 Installed MPICH_jll ─────────────────── v4.3.0+1 Installed oneTBB_jll ────────────────── v2022.0.0+0 Installed AliasTables ───────────────── v1.1.3 Installed DelimitedFiles ────────────── v1.9.1 Installed StatsBase ─────────────────── v0.34.5 Installed MicrosoftMPI_jll ──────────── v10.1.4+3 Installed JuliaVariables ────────────── v0.2.4 Installed Compat ────────────────────── v4.16.0 Installed OrderedCollections ────────── v1.8.1 Installed Functors ──────────────────── v0.5.2 Installed ArrayInterface ────────────── v7.19.0 Installed ComradeBase ───────────────── v0.9.4 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed RecipesBase ───────────────── v1.3.4 Installed DataAPI ───────────────────── v1.16.0 Installed EnzymeCore ────────────────── v0.8.11 Installed InvertedIndices ───────────── v1.3.1 Installed Statistics ────────────────── v1.11.1 Installed InitialValues ─────────────── v0.3.1 Installed PrecompileTools ───────────── v1.3.2 Installed IntelOpenMP_jll ───────────── v2025.0.4+0 Installed StatsAPI ──────────────────── v1.7.1 Installed DataValueInterfaces ───────── v1.0.0 Installed ArgCheck ──────────────────── v2.5.0 Installed StructArrays ──────────────── v0.7.1 Installed CommonSubexpressions ──────── v0.3.1 Installed OffsetArrays ──────────────── v1.17.0 Installed StaticArrays ──────────────── v1.9.13 Installed StaticArraysCore ──────────── v1.4.3 Installed PrettyPrint ───────────────── v0.2.0 Installed IrrationalConstants ───────── v0.2.4 Installed ChainRulesCore ────────────── v1.25.1 Installed BangBang ──────────────────── v0.4.4 Installed AbstractFFTs ──────────────── v1.5.0 Installed FITSIO ────────────────────── v0.17.5 Installed DimensionalData ───────────── v0.29.17 Installed StaticArrayInterface ──────── v1.8.0 Installed NaNMath ───────────────────── v1.1.3 Installed AxisAlgorithms ────────────── v1.1.0 Installed Ratios ────────────────────── v0.4.5 Installed QuadGK ────────────────────── v2.11.2 Installed NFFT ──────────────────────── v0.13.7 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed VLBISkyModels ─────────────── v0.6.13 Installed Requires ──────────────────── v1.3.1 Installed HDF5_jll ──────────────────── v1.14.6+0 Installed LogExpFunctions ───────────── v0.3.29 Installed Interpolations ────────────── v0.15.1 Installed TransformVariables ────────── v0.8.17 Installed OpenMPI_jll ───────────────── v5.0.7+2 Installed FLoopsBase ────────────────── v0.1.1 Installed Distributions ─────────────── v0.25.120 Installed DiffRules ─────────────────── v1.15.1 Installed Interfaces ────────────────── v0.3.2 Installed Hwloc_jll ─────────────────── v2.12.1+0 Installed NamedTupleTools ───────────── v0.14.3 Installed IfElse ────────────────────── v0.1.1 Installed Rmath ─────────────────────── v0.8.0 Installed SplittablesBase ───────────── v0.1.15 Installed StatsFuns ─────────────────── v1.5.0 Installed WoodburyMatrices ──────────── v1.0.0 Installed PtrArrays ─────────────────── v1.3.0 Installed CFITSIO_jll ───────────────── v4.6.2+0 Installed Tables ────────────────────── v1.12.1 Installed CFITSIO ───────────────────── v1.7.2 Installed Memoize ───────────────────── v0.4.4 Installed Transducers ───────────────── v0.4.84 Installed Reexport ──────────────────── v1.2.2 Installed Missings ──────────────────── v1.2.0 Installed InverseFunctions ──────────── v0.1.17 Installed Setfield ──────────────────── v1.1.2 Installed IntervalSets ──────────────── v0.7.11 Installed Preferences ───────────────── v1.4.3 Installed SpecialFunctions ──────────── v2.5.1 Installed MPIPreferences ────────────── v0.1.11 Installed Static ────────────────────── v1.2.0 Installed FFTW_jll ──────────────────── v3.3.11+0 Installed Baselet ───────────────────── v0.1.1 Installed JLLWrappers ───────────────── v1.7.0 Installed BasicInterpolators ────────── v0.7.1 Installed FFTW ──────────────────────── v1.9.0 Installed TableTraits ───────────────── v1.0.1 Installed PDMats ────────────────────── v0.11.35 Installed MPItrampoline_jll ─────────── v5.5.3+0 Installed DocStringExtensions ───────── v0.9.5 Installed SortingAlgorithms ─────────── v1.2.1 Installed GridInterpolations ────────── v1.3.0 Installed MLStyle ───────────────────── v0.4.17 Installed Accessors ─────────────────── v0.1.42 Installed AbstractNFFTs ─────────────── v0.8.2 Installed HDF5 ──────────────────────── v0.17.2 Installing 10 artifacts Installed artifact Rmath 121.9 KiB Installed artifact libaec 96.2 KiB Installed artifact Bzip2 503.5 KiB Installed artifact FFTW 2.2 MiB Installed artifact CFITSIO 896.7 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact oneTBB 435.6 KiB Installed artifact Hwloc 3.5 MiB Installed artifact MPICH 3.3 MiB Installed artifact HDF5 5.7 MiB Updating `~/.julia/environments/v1.13/Project.toml` [4096cdfb] + VIDA v0.13.1 Updating `~/.julia/environments/v1.13/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [7f219486] + AbstractNFFTs v0.8.2 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [4fba245c] + ArrayInterface v7.19.0 [13072b0f] + AxisAlgorithms v1.1.0 [198e06fe] + BangBang v0.4.4 [9718e550] + Baselet v0.1.1 [26cce99e] + BasicInterpolators v0.7.1 [3b1b4be9] + CFITSIO v1.7.2 [d360d2e6] + ChainRulesCore v1.25.1 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.16.0 [b0b7db55] + ComponentArrays v0.15.27 [a33af91c] + CompositionsBase v0.1.2 [6d8c423b] + ComradeBase v0.9.4 [187b0558] + ConstructionBase v1.5.8 [6add18c4] + ContextVariablesX v0.1.3 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [8bb1440f] + DelimitedFiles v1.9.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [0703355e] + DimensionalData v0.29.17 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [f151be2c] + EnzymeCore v0.8.11 [411431e0] + Extents v0.1.6 [7a1cc6ca] + FFTW v1.9.0 [525bcba6] + FITSIO v0.17.5 [cc61a311] + FLoops v0.2.2 [b9860ae5] + FLoopsBase v0.1.1 [1a297f60] + FillArrays v1.13.0 [f6369f11] + ForwardDiff v1.0.1 [d9f16b24] + Functors v0.5.2 [bb4c363b] + GridInterpolations v1.3.0 [f67ccb44] + HDF5 v0.17.2 [9ec9aee3] + HypercubeTransform v0.4.4 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [22cec73e] + InitialValues v0.3.1 [85a1e053] + Interfaces v0.3.2 ⌅ [a98d9a8b] + Interpolations v0.15.1 [8197267c] + IntervalSets v0.7.11 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [b14d175d] + JuliaVariables v0.2.4 [2ab3a3ac] + LogExpFunctions v0.3.29 [d8e11817] + MLStyle v0.4.17 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [c03570c3] + Memoize v0.4.4 [128add7d] + MicroCollections v0.2.0 [e1d29d7a] + Missings v1.2.0 [efe261a4] + NFFT v0.13.7 [77ba4419] + NaNMath v1.1.3 [71a1bf82] + NameResolution v0.1.5 [d9ec5142] + NamedTupleTools v0.14.3 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [5432bcbf] + PaddedViews v0.5.12 [d3c5d4cd] + PolarizedTypes v0.1.2 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [8162dcfd] + PrettyPrint v0.2.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [c84ed2f1] + Ratios v0.4.5 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.1 [171d559e] + SplittablesBase v0.1.15 [aedffcd0] + Static v1.2.0 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.5 [4c63d2b9] + StatsFuns v1.5.0 [09ab397b] + StructArrays v0.7.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [28d57a85] + Transducers v0.4.84 [84d833dd] + TransformVariables v0.8.17 [410a4b4d] + Tricks v0.1.10 [4096cdfb] + VIDA v0.13.1 [d6343c73] + VLBISkyModels v0.6.13 [efce3f68] + WoodburyMatrices v1.0.0 [6e34b625] + Bzip2_jll v1.0.9+0 [b3e40c51] + CFITSIO_jll v4.6.2+0 [f5851436] + FFTW_jll v3.3.11+0 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.1+0 [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0 [856f044c] + MKL_jll v2025.0.1+1 [7cb0a576] + MPICH_jll v4.3.0+1 [f1f71cc9] + MPItrampoline_jll v5.5.3+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.7+2 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [477f73a3] + libaec_jll v1.1.3+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.12.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.5.20 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.5.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 16.82s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 5011.1 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 25 already precompiled. Precompiling package dependencies... ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 168 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1213 wait_forever at ./task.jl:1150 jfptr_wait_forever_42753.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3611 [inlined] ijl_apply_generic at /source/src/gf.c:3811 jl_apply at /source/src/julia.h:2340 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007cb5f30ee0e0 Total snapshots: 494. Utilization: 0% ╎494 @Base/task.jl:1150 wait_forever() 493╎ 494 @Base/task.jl:1213 wait() ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1213 wait_forever at ./task.jl:1150 jfptr_wait_forever_42753.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3611 [inlined] ijl_apply_generic at /source/src/gf.c:3811 jl_apply at /source/src/julia.h:2340 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007071fe303c10 Total snapshots: 442. Utilization: 0% ╎442 @Base/task.jl:1150 wait_forever() 441╎ 442 @Base/task.jl:1213 wait() [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:152 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 [168] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/precompile.jl:37 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1213 wait at ./task.jl:1213 wait_forever at ./task.jl:1150 wait_forever at ./task.jl:1150 jfptr_wait_forever_42753.1 at /opt/julia/lib/julia/sys.so (unknown line) jfptr_wait_forever_42753.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3611 [inlined] ijl_apply_generic at /source/src/gf.c:3811 jl_apply at /source/src/julia.h:2340 [inlined] _jl_invoke at /source/src/gf.c:3611 [inlined] ijl_apply_generic at /source/src/gf.c:3811 jl_apply at /source/src/julia.h:2340 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 19392733 (Pool: 19390871; Big: 1862); GC: 66 start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 16364525 (Pool: 16363748; Big: 777); GC: 17 PkgEval terminated after 2733.94s: test duration exceeded the time limit