Package evaluation of SBMLFBCModels on Julia 1.13.0-DEV.704 (4632cd28b9*) started at 2025-06-05T14:44:16.669


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 6.52s


################################################################################
# Installation
#

Installing SBMLFBCModels...
   Resolving package versions...
    Updating `~/.julia/environments/v1.13/Project.toml`
  [3e8f9d1a] + SBMLFBCModels v1.1.0
    Updating `~/.julia/environments/v1.13/Manifest.toml`
  [5a4f3dfa] + AbstractFBCModels v1.3.0
  [ffbed154] + DocStringExtensions v0.9.4
  [615f187c] + IfElse v0.1.1
  [692b3bcd] + JLLWrappers v1.7.0
  [21216c6a] + Preferences v1.4.3
  [e5567a89] + SBML v1.6.0
  [3e8f9d1a] + SBMLFBCModels v1.1.0
  [1986cc42] + Unitful v1.22.1
  [94ce4f54] + Libiconv_jll v1.18.0+0
  [bb12108a] + SBML_jll v5.20.1+0
⌅ [02c8fc9c] + XML2_jll v2.13.6+1
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [b27032c2] + LibCURL v0.6.4
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.12.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [2f01184e] + SparseArrays v1.12.0
  [f489334b] + StyledStrings v1.11.0
  [fa267f1f] + TOML v1.0.3
  [8dfed614] + Test v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.12.1+1
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2025.5.20
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [458c3c95] + OpenSSL_jll v3.5.0+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [83775a58] + Zlib_jll v1.3.1+2
  [8e850b90] + libblastrampoline_jll v5.12.0+0
  [8e850ede] + nghttp2_jll v1.65.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 3.05s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 18.04s


################################################################################
# Testing
#

     Testing SBMLFBCModels
      Status `/tmp/jl_o6jRWV/Project.toml`
  [5a4f3dfa] AbstractFBCModels v1.3.0
  [ffbed154] DocStringExtensions v0.9.4
  [e5567a89] SBML v1.6.0
  [3e8f9d1a] SBMLFBCModels v1.1.0
  [2f01184e] SparseArrays v1.12.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_o6jRWV/Manifest.toml`
  [5a4f3dfa] AbstractFBCModels v1.3.0
  [ffbed154] DocStringExtensions v0.9.4
  [615f187c] IfElse v0.1.1
  [692b3bcd] JLLWrappers v1.7.0
  [21216c6a] Preferences v1.4.3
  [e5567a89] SBML v1.6.0
  [3e8f9d1a] SBMLFBCModels v1.1.0
  [1986cc42] Unitful v1.22.1
  [94ce4f54] Libiconv_jll v1.18.0+0
  [bb12108a] SBML_jll v5.20.1+0
⌅ [02c8fc9c] XML2_jll v2.13.6+1
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [f43a241f] Downloads v1.7.0
  [7b1f6079] FileWatching v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [b27032c2] LibCURL v0.6.4
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.12.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [2f01184e] SparseArrays v1.12.0
  [f489334b] StyledStrings v1.11.0
  [fa267f1f] TOML v1.0.3
  [8dfed614] Test v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] LibCURL_jll v8.12.1+1
  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2025.5.20
  [4536629a] OpenBLAS_jll v0.3.29+0
  [458c3c95] OpenSSL_jll v3.5.0+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [83775a58] Zlib_jll v1.3.1+2
  [8e850b90] libblastrampoline_jll v5.12.0+0
  [8e850ede] nghttp2_jll v1.65.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...

SBMLFBCModels tests: Error During Test at /home/pkgeval/.julia/packages/SBMLFBCModels/EZV7W/test/runtests.jl:8
  Got exception outside of a @test
  RequestError: Connection timed out after 30032 milliseconds while requesting http://bigg.ucsd.edu/static/models/e_coli_core.xml
  Stacktrace:
    [1] (::Downloads.var"#26#27"{IOStream, Base.DevNull, Nothing, Vector{Pair{String, String}}, Float64, Nothing, Bool, Nothing, Bool, Nothing, String, Bool, Bool})(easy::Downloads.Curl.Easy)
      @ Downloads /opt/julia/share/julia/stdlib/v1.13/Downloads/src/Downloads.jl:479
    [2] with_handle(f::Downloads.var"#26#27"{IOStream, Base.DevNull, Nothing, Vector{Pair{String, String}}, Float64, Nothing, Bool, Nothing, Bool, Nothing, String, Bool, Bool}, handle::Downloads.Curl.Easy)
      @ Downloads.Curl /opt/julia/share/julia/stdlib/v1.13/Downloads/src/Curl/Curl.jl:105
    [3] #24
      @ /opt/julia/share/julia/stdlib/v1.13/Downloads/src/Downloads.jl:390 [inlined]
    [4] arg_write(f::Downloads.var"#24#25"{Base.DevNull, Nothing, Vector{Pair{String, String}}, Float64, Nothing, Bool, Nothing, Bool, Nothing, String, Bool, Bool}, arg::IOStream)
      @ ArgTools /opt/julia/share/julia/stdlib/v1.13/ArgTools/src/ArgTools.jl:134
    [5] #22
      @ /opt/julia/share/julia/stdlib/v1.13/Downloads/src/Downloads.jl:389 [inlined]
    [6] arg_read
      @ /opt/julia/share/julia/stdlib/v1.13/ArgTools/src/ArgTools.jl:76 [inlined]
    [7] #request#9
      @ /opt/julia/share/julia/stdlib/v1.13/Downloads/src/Downloads.jl:388 [inlined]
    [8] request
      @ /opt/julia/share/julia/stdlib/v1.13/Downloads/src/Downloads.jl:355 [inlined]
    [9] (::Downloads.var"#7#8"{Nothing, Vector{Pair{String, String}}, Float64, Nothing, Bool, Nothing, Nothing, String})(output::IOStream)
      @ Downloads /opt/julia/share/julia/stdlib/v1.13/Downloads/src/Downloads.jl:273
   [10] open(f::Downloads.var"#7#8"{Nothing, Vector{Pair{String, String}}, Float64, Nothing, Bool, Nothing, Nothing, String}, args::String; kwargs::@Kwargs{write::Bool, lock::Bool})
      @ Base ./io.jl:420
   [11] open_nolock
      @ /opt/julia/share/julia/stdlib/v1.13/ArgTools/src/ArgTools.jl:35 [inlined]
   [12] arg_write(f::Function, arg::String)
      @ ArgTools /opt/julia/share/julia/stdlib/v1.13/ArgTools/src/ArgTools.jl:103
   [13] #download#5
      @ /opt/julia/share/julia/stdlib/v1.13/Downloads/src/Downloads.jl:272 [inlined]
   [14] download
      @ /opt/julia/share/julia/stdlib/v1.13/Downloads/src/Downloads.jl:252 [inlined]
   [15] download_data_file(url::String, path::String, hash::String)
      @ AbstractFBCModels ~/.julia/packages/AbstractFBCModels/bQECn/src/utils.jl:128
   [16] macro expansion
      @ ~/.julia/packages/SBMLFBCModels/EZV7W/test/runtests.jl:35 [inlined]
   [17] macro expansion
      @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1833 [inlined]
   [18] top-level scope
      @ ~/.julia/packages/SBMLFBCModels/EZV7W/test/runtests.jl:9
   [19] include(mapexpr::Function, mod::Module, _path::String)
      @ Base ./Base.jl:310
   [20] top-level scope
      @ none:6
   [21] eval(m::Module, e::Any)
      @ Core ./boot.jl:489
   [22] exec_options(opts::Base.JLOptions)
      @ Base ./client.jl:290
   [23] _start()
      @ Base ./client.jl:557
Test Summary:                        | Pass  Error  Total   Time
SBMLFBCModels tests                  |   33      1     34  34.6s
  Model type SBMLFBCModel properties |   33            33   1.1s
RNG of the outermost testset: Random.Xoshiro(0x014d08a5dcc0dfab, 0x1f1cc9cf78f4e495, 0x02b1d3f60b61bffa, 0xe7d3e890f12e11fb, 0xc2e7e5d918cacb29)
ERROR: LoadError: Some tests did not pass: 33 passed, 0 failed, 1 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/SBMLFBCModels/EZV7W/test/runtests.jl:8

Testing failed after 16.69s

ERROR: LoadError: Package SBMLFBCModels errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2421
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2276 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:498
  [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:164
  [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:152
  [7] test
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:152 [inlined]
  [8] #test#81
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:151 [inlined]
  [9] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:219
 [10] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [11] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:324
 [12] _start()
    @ Base ./client.jl:557
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 98.27s: package tests unexpectedly errored