Package evaluation of BoundaryLayerDynamics on Julia 1.13.0-DEV.680 (905a44b8ef*) started at 2025-06-01T18:45:55.073 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 6.41s ################################################################################ # Installation # Installing BoundaryLayerDynamics... Resolving package versions... Installed HDF5 ─ v0.16.16 Updating `~/.julia/environments/v1.13/Project.toml` [9d12ad70] + BoundaryLayerDynamics v1.0.0 Updating `~/.julia/environments/v1.13/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 ⌅ [79e6a3ab] + Adapt v3.7.2 ⌃ [4fba245c] + ArrayInterface v7.7.1 [9d12ad70] + BoundaryLayerDynamics v1.0.0 [34da2185] + Compat v4.16.0 [9a962f9c] + DataAPI v1.16.0 [e2d170a0] + DataValueInterfaces v1.0.0 [ffbed154] + DocStringExtensions v0.9.4 [e2ba6199] + ExprTools v0.1.10 [7a1cc6ca] + FFTW v1.8.1 ⌅ [46192b85] + GPUArraysCore v0.1.5 ⌅ [f67ccb44] + HDF5 v0.16.16 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] + JSON v0.21.4 [da04e1cc] + MPI v0.20.22 [3da0fdf6] + MPIPreferences v0.1.11 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [eebad327] + PkgVersion v0.3.3 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [3cdcf5f2] + RecipesBase v1.3.4 ⌅ [731186ca] + RecursiveArrayTools v2.38.10 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 ⌅ [2efcf032] + SymbolicIndexingInterface v0.2.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [a759f4b9] + TimerOutputs v0.5.29 [f5851436] + FFTW_jll v3.3.11+0 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.1+0 [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0 [856f044c] + MKL_jll v2025.0.1+1 [7cb0a576] + MPICH_jll v4.3.0+1 [f1f71cc9] + MPItrampoline_jll v5.5.3+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.7+2 [477f73a3] + libaec_jll v1.1.3+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.12.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.5.20 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building HDF5 → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/114e20044677badbc631ee6fdc80a67920561a29/build.log` Installation completed after 13.11s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 18.43s ################################################################################ # Testing # Testing BoundaryLayerDynamics Status `/tmp/jl_y0Aysm/Project.toml` [9d12ad70] BoundaryLayerDynamics v1.0.0 ⌅ [f67ccb44] HDF5 v0.16.16 [da04e1cc] MPI v0.20.22 [a759f4b9] TimerOutputs v0.5.29 [37e2e46d] LinearAlgebra v1.12.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_y0Aysm/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 ⌅ [79e6a3ab] Adapt v3.7.2 ⌃ [4fba245c] ArrayInterface v7.7.1 [9d12ad70] BoundaryLayerDynamics v1.0.0 [34da2185] Compat v4.16.0 [9a962f9c] DataAPI v1.16.0 [e2d170a0] DataValueInterfaces v1.0.0 [ffbed154] DocStringExtensions v0.9.4 [e2ba6199] ExprTools v0.1.10 [7a1cc6ca] FFTW v1.8.1 ⌅ [46192b85] GPUArraysCore v0.1.5 ⌅ [f67ccb44] HDF5 v0.16.16 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [da04e1cc] MPI v0.20.22 [3da0fdf6] MPIPreferences v0.1.11 [bac558e1] OrderedCollections v1.8.1 [69de0a69] Parsers v2.8.3 [eebad327] PkgVersion v0.3.3 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [3cdcf5f2] RecipesBase v1.3.4 ⌅ [731186ca] RecursiveArrayTools v2.38.10 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 ⌅ [2efcf032] SymbolicIndexingInterface v0.2.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.0 [a759f4b9] TimerOutputs v0.5.29 [f5851436] FFTW_jll v3.3.11+0 [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.1+0 [1d5cc7b8] IntelOpenMP_jll v2025.0.4+0 [856f044c] MKL_jll v2025.0.1+1 [7cb0a576] MPICH_jll v4.3.0+1 [f1f71cc9] MPItrampoline_jll v5.5.3+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.7+2 [477f73a3] libaec_jll v1.1.3+0 [1317d2d5] oneTBB_jll v2022.0.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.12.1+1 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.5.20 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.12.0+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Testing BoundaryLayerDynamics.jl... (single process) Test Summary: | Pass Total Time Atmospheric Boundary Layer Simulations | 290 290 11m18.1s ─────────────────────────────────────────────────────────────────────────────────────────────── Time Allocations ─────────────────────── ──────────────────────── Tot / % measured: 688s / 98.6% 29.7GiB / 99.4% Section ncalls time %tot avg alloc %tot avg ─────────────────────────────────────────────────────────────────────────────────────────────── BoundaryLayerDynamics.jl Tests 1 678s 100.0% 678s 29.5GiB 100.0% 29.5GiB Advection 1 192s 28.3% 192s 5.03GiB 17.0% 5.03GiB Nonlinear Processes 28 123s 18.2% 4.40s 394MiB 1.3% 14.1MiB Resolved Advection 28 122s 18.0% 4.37s 370MiB 1.2% 13.2MiB Linear Processes 28 456μs 0.0% 16.3μs 17.1KiB 0.0% 624B LES 1 100s 14.7% 100s 2.85GiB 9.7% 2.85GiB Nonlinear Processes 2 35.6s 5.2% 17.8s 849MiB 2.8% 424MiB Static Smagorinsky SGS Model 2 26.8s 3.9% 13.4s 577MiB 1.9% 289MiB Linear Processes 2 52.3ms 0.0% 26.1ms 210KiB 0.0% 105KiB Laminar Flows 1 99.4s 14.6% 99.4s 6.29GiB 21.3% 6.29GiB ABL Simulation 1 80.8s 11.9% 80.8s 5.80GiB 19.7% 5.80GiB Pressure 1 57.5s 8.5% 57.5s 3.45GiB 11.7% 3.45GiB Projections 11 111ms 0.0% 10.1ms 3.44MiB 0.0% 320KiB Pressure Solver 11 111ms 0.0% 10.1ms 3.44MiB 0.0% 320KiB Logging 1 46.1s 6.8% 46.1s 1.55GiB 5.3% 1.55GiB ODE 1 32.9s 4.9% 32.9s 1.19GiB 4.0% 1.19GiB Output 1 27.7s 4.1% 27.7s 1.62GiB 5.5% 1.62GiB Transforms 1 23.8s 3.5% 23.8s 700MiB 2.3% 700MiB Diffusion 1 8.89s 1.3% 8.89s 592MiB 2.0% 592MiB Linear Processes 1 867ms 0.1% 867ms 12.2MiB 0.0% 12.2MiB Molecular Diffusion 3 867ms 0.1% 289ms 12.2MiB 0.0% 4.07MiB Nonlinear Processes 1 160ms 0.0% 160ms 1.68MiB 0.0% 1.68MiB Derivatives 1 6.75s 1.0% 6.75s 408MiB 1.4% 408MiB Nonlinear Processes 1 2.03s 0.3% 2.03s 55.6MiB 0.2% 55.6MiB VorticityTest 1 1.59s 0.2% 1.59s 47.9MiB 0.2% 47.9MiB Linear Processes 1 11.1ms 0.0% 11.1ms 77.3KiB 0.0% 77.3KiB Grid 1 1.81s 0.3% 1.81s 56.7MiB 0.2% 56.7MiB ─────────────────────────────────────────────────────────────────────────────────────────────── PrecompilingPrecompilingPrecompilingPrecompiling packages...packages... packages... packages... ExprToolsExprToolsExprTools Being precompiled by another process (pid: 213, pidfile: /home/pkgeval/.julia/compiled/v1.13/ExprTools/eM8wu_gFADj.ji.pidfile) Being precompiled by another process (pid: 213, pidfile: /home/pkgeval/.julia/compiled/v1.13/ExprTools/eM8wu_gFADj.ji.pidfile) Being precompiled by another process (pid: 213, pidfile: /home/pkgeval/.julia/compiled/v1.13/ExprTools/eM8wu_gFADj.ji.pidfile) MPI Being precompiled by another process (pid: 212, pidfile: /home/pkgeval/.julia/compiled/v1.13/MPI/nO0XF_gFADj.ji.pidfile) MPI Being precompiled by another process (pid: 212, pidfile: /home/pkgeval/.julia/compiled/v1.13/MPI/nO0XF_gFADj.ji.pidfile) Adapt Being precompiled by another process (pid: 211, pidfile: /home/pkgeval/.julia/compiled/v1.13/Adapt/rUIgN_gFADj.ji.pidfile) 3768.5 ms ✓ ExprTools 3741.9 ms ✓ Adapt RecipesBase Being precompiled by another process (pid: 214, pidfile: /home/pkgeval/.julia/compiled/v1.13/RecipesBase/8e2Mm_gFADj.ji.pidfile) SymbolicIndexingInterface Being precompiled by another process (pid: 213, pidfile: /home/pkgeval/.julia/compiled/v1.13/SymbolicIndexingInterface/nIEWT_gFADj.ji.pidfile) 3949.0 ms ✓ SymbolicIndexingInterface 3343.4 ms ✓ Adapt RecipesBase Being precompiled by another process (pid: 214, pidfile: /home/pkgeval/.julia/compiled/v1.13/RecipesBase/8e2Mm_gFADj.ji.pidfile) MPI Being precompiled by another process (pid: 212, pidfile: /home/pkgeval/.julia/compiled/v1.13/MPI/nO0XF_gFADj.ji.pidfile) HDF5 Being precompiled by another process (pid: 211, pidfile: /home/pkgeval/.julia/compiled/v1.13/HDF5/L7Dga_gFADj.ji.pidfile) 25613.4 ms ✓ RecipesBase 5367.3 ms ✓ SymbolicIndexingInterface HDF5 Being precompiled by another process (pid: 211, pidfile: /home/pkgeval/.julia/compiled/v1.13/HDF5/L7Dga_gFADj.ji.pidfile) 33232.1 ms ✓ ExprTools 30987.9 ms ✓ Adapt TimerOutputs Being precompiled by another process (pid: 213, pidfile: /home/pkgeval/.julia/compiled/v1.13/TimerOutputs/hd2yD_gFADj.ji.pidfile) 7183.7 ms ✓ ArrayInterface 5760.3 ms ✓ GPUArraysCore 5254.5 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 6332.8 ms ✓ ArrayInterface → ArrayInterfaceGPUArraysCoreExt 61811.7 ms ✓ MPI 4573.4 ms ✓ Adapt 13968.9 ms ✓ RecursiveArrayTools 69655.6 ms ✓ MPI 64006.1 ms ✓ TimerOutputs 43058.1 ms ✓ TimerOutputs 6181.2 ms ✓ ArrayInterface 4008.9 ms ✓ GPUArraysCore 75451.9 ms ✓ RecipesBase 74206.5 ms ✓ MPI 20033.6 ms ✓ RecipesBase 4239.1 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 4042.9 ms ✓ SymbolicIndexingInterface HDF5 Being precompiled by another process (pid: 211, pidfile: /home/pkgeval/.julia/compiled/v1.13/HDF5/L7Dga_gFADj.ji.pidfile) 92582.7 ms ✓ ExprTools 4463.8 ms ✓ ArrayInterface → ArrayInterfaceGPUArraysCoreExt 5431.3 ms ✓ ArrayInterface 95677.5 ms ✓ HDF5 101643.9 ms ✓ ExprTools 4512.6 ms ✓ GPUArraysCore 69595.6 ms ✓ HDF5 12 dependencies successfully precompiled in 104 seconds. 66 already precompiled. 7171.4 ms ✓ ArrayInterface 15823.8 ms ? RecursiveArrayTools 98792.5 ms ✓ HDF5 11 dependencies successfully precompiled in 112 seconds. 66 already precompiled. 1 dependencies failed but may be precompilable after restarting julia 1 dependency had output during precompilation: ┌ RecursiveArrayTools │ ┌ Warning: Module ArrayInterface with build ID fafbfcfd-7725-e12c-919f-48ace2275ce1 is missing from the cache. │ │ This may mean ArrayInterface [4fba245c-0d91-5ea0-9b3e-6abc04ee57a9] does not support precompilation but is imported by a module that does. │ └ @ Base loading.jl:2614 └  5084.6 ms ✓ GPUArraysCore 107934.7 ms ✓ SymbolicIndexingInterface 107950.4 ms ✓ RecipesBase 111758.5 ms ✓ MPI TimerOutputs Being precompiled by another process (pid: 212, pidfile: /home/pkgeval/.julia/compiled/v1.13/TimerOutputs/hd2yD_gFADj.ji.pidfile) 5635.4 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 5739.2 ms ✓ ArrayInterface → ArrayInterfaceGPUArraysCoreExt Precompiling packages... 13446.8 ms ✓ RecursiveArrayTools 14158.0 ms ✓ RecursiveArrayTools 1 dependency successfully precompiled in 15 seconds. 29 already precompiled. 38234.6 ms 49596.4 ms ✓ TimerOutputs  ✓ TimerOutputs 12 dependencies successfully precompiled in 153 seconds. 66 already precompiled. 3178.0 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 62720.0 ms ✓ HDF5 2049.1 ms ✓ ArrayInterface → ArrayInterfaceGPUArraysCoreExt 5803.1 ms ✓ RecursiveArrayTools 12 dependencies successfully precompiled in 164 seconds. 66 already precompiled. Error During MPI Tests (n=4) at /home/pkgeval/.julia/packages/BoundaryLayerDynamics/x9Zng/test/runtests.jl:47 Stacktrace: [1] top-level scope @ ~/.julia/packages/BoundaryLayerDynamics/x9Zng/test/runtests.jl:47 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [3] top-level scope @ none:6 [4] eval(m::Module, e::Any) @ Core ./boot.jl:489 [5] exec_options(opts::Base.JLOptions) @ Base ./client.jl:290 [6] _start() @ Base ./client.jl:557 Testing failed after 709.24s ERROR: LoadError: Package BoundaryLayerDynamics errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2421 [3] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2276 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:498 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:164 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:152 [7] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:152 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:151 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [10] include(mod::Module, _path::String) @ Base ./Base.jl:309 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:324 [12] _start() @ Base ./client.jl:557 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 940.28s: package tests unexpectedly errored