FastQCFastQC Report
Tue 14 Jan 2025
4DNFIZS65JVS.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIZS65JVS.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46106212
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGCCTTACGGACTCAATT1297070.2813221784517887No Hit
CAGACGCGAGTAACCACGGTACGC1050410.2278239643716556No Hit
CAGACGCGGGTTATCCTTCAAGGA977090.21192155191582426No Hit
CAGACGCGTCAATGAACGCTAACA975970.21167863454061245No Hit
CAGACGCGGCGGATACTAGGCTGA759890.16481293236581657No Hit
CAGACGCGCGGGAACCTAACGGAC579390.12566419466426781No Hit
CAGACGCGCCTGCTCCTATGTGGG548610.11898830465621422No Hit
CAGACGCGAGGTTATGACACCTTG543020.1177758866852909No Hit
CAGACGCGTAGGCATGAGGTTGGT522000.11321684808979754No Hit
CAGACGCGGTAGCAGCTCCCTCAC498660.10815462350279395No Hit
GGGGGGGGGGGGGGGGGGGGGGGG484970.10518539237185653No Hit
CAGACGCGCAGTCTATGTGCGGAA474440.10290153526383819No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)