FastQCFastQC Report
Tue 14 Jan 2025
4DNFIZPJTSWO.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIZPJTSWO.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72602146
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGGGAACCTGTAATGGA2169380.2988038397652874No Hit
CAGACGCGCTAACAGGATTATTGC2033780.2801267058965447No Hit
CAGACGCGCCAATATCTTCAACCG1203880.16581878998452745No Hit
CAGACGCGCGGTTAGACTCAATAG1159730.15973770251915143No Hit
CAGACGCGGGAACAAGAGCTTGCC1089650.1500850952807924No Hit
CAGACGCGCTCTAGCGACGAAGGA1016910.14006610768778102No Hit
CAGACGCGCGATCCGTGTTCAAGC986110.1358238088444383No Hit
CAGACGCGCGTAAATACCTTTACG973360.1340676624076649No Hit
CAGACGCGCAATGCGACCTCACAT953270.13130052657121183No Hit
GGGGGGGGGGGGGGGGGGGGGGGG850050.11708331596699635No Hit
CAGACGCGAAATGACCTCACAACC846960.11665770871290775No Hit
CAGACGCGCATAGTGGATTACGGA835930.11513846987387948No Hit
CAGACGCGTCTCTATTGCACCTAA825170.11365642001821818No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)