FastQCFastQC Report
Tue 14 Jan 2025
4DNFIZEHB7XG.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIZEHB7XG.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43863602
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTGCTGTGCTTCGCTTT1663920.3793395717934884No Hit
CAGACGCGTAAGGCTGACTTACAT1576990.3595213179255092No Hit
CAGACGCGGTCACCATGTAACGAA1168360.2663620739582673No Hit
CAGACGCGATAGCTCCTTAACCGC1006430.22944536109916372No Hit
CAGACGCGCATGGCGGAGTCGCAA1002960.2286542723965077No Hit
CAGACGCGGGTTACAACCTTTAGC958880.2186049380987909No Hit
CAGACGCGTCTCAAACTTCAATAC957270.21823789117911474No Hit
CAGACGCGTTTGAGCTGAGGAACT929440.21189322299614155No Hit
CAGACGCGGTCTAGCTGTCATCAG652010.1486448832907065No Hit
CAGACGCGTGCTAGCCTATCCTCC619960.14133814181516602No Hit
CAGACGCGGGGAGGACTCGATTAT612630.13966705242310012No Hit
CAGACGCGCCTTTCTGATTGCTAT558600.12734932256589415No Hit
GGGGGGGGGGGGGGGGGGGGGGGG552600.1259814458466042No Hit
CAGACGCGAAGCACGCTCCATCCC503770.11484920914611618No Hit
CAGACGCGTGTGAGCACGCCACTT502980.11466910537807633No Hit
CAGACGCGAGGACTTACGTAGCTA485390.11065894679602463No Hit
CAGACGCGCTAACGGACAAAGGTA483290.11018018994427316No Hit
CAGACGCGCCTAAGGACCTCGACC476370.10860257212802543No Hit
CAGACGCGACAAAGAACTAATGCA476180.10855925603191457No Hit
CAGACGCGTAGGTAGCTTAACGGA471290.10744443650569326No Hit
CAGACGCGGAAACTCACACAAAGA450960.10280961422183249No Hit
CAGACGCGTAAGGCTGATCCGTCA447500.10202080531370862No Hit
CAGACGCGGCTGCAAGAGGGAGCA444920.10143261832441393No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)