FastQCFastQC Report
Tue 14 Jan 2025
4DNFIYIC1XG1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIYIC1XG1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59062475
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGAGGGTGGGAACAAGGA2822870.4779464456916172No Hit
CAGACGCGCCAATACTGATGACAG1869960.31660711814057907No Hit
CAGACGCGCGCACCATGCACCTAA1650580.27946339871466613No Hit
CAGACGCGCAGTAATACCTTAACC1331030.22535967210991414No Hit
CAGACGCGGACCTAGGAACATAAC985020.16677594360886502No Hit
CAGACGCGTCGACAAGAAGGACAA966480.16363689466111944No Hit
CAGACGCGGGTTGGTGACATTACT941340.15938038492291426No Hit
CAGACGCGGCTATGTCTATGGCTT940050.15916197213205172No Hit
CAGACGCGGTCGATTCTTAGGTAG902000.15271964136281116No Hit
CAGACGCGGACTTGCTGACACAAG829550.14045296950390246No Hit
CAGACGCGGAACCGCACCCGCTCA811640.13742058726797346No Hit
CAGACGCGCTATTGTGATTGAGTG739140.12514544979701578No Hit
CAGACGCGGTGAGGAACCCGCTCA709940.12020153236043697No Hit
CAGACGCGGACCAGGTGTGCTGGC695680.11778713980408034No Hit
CAGACGCGATGAGGAGAGCATGCA695070.11768385933708331No Hit
CAGACGCGGGCTTCGCTGCAAGTG685690.11609571051670288No Hit
CAGACGCGTATGCTCACGCTTGTC685670.1160923242718833No Hit
CAGACGCGAGCAAGCCTCGCTCAA675850.1144296780654722No Hit
CAGACGCGTGGGTTAGAGGCATGT668510.11318692621668834No Hit
CAGACGCGTGGCTTATGGCGCGAA668360.11316152938054154No Hit
CAGACGCGGCCAACCCTAGATTGA661190.11194756061272407No Hit
CAGACGCGGGATTTAGATAACCGA659260.11162078798763511No Hit
CAGACGCGAAGTGAGGAGCTTGAG650230.11009189845159723No Hit
CAGACGCGTCGATTCACTTAAAGC640970.10852406710013422No Hit
CAGACGCGTGAACGGTGACACAAG626580.10608766395245035No Hit
CAGACGCGTAGGTTTCTAAAGCGC620480.10505485928248012No Hit
CAGACGCGGGTAACTACGCCACAG619900.10495665818271245No Hit
CAGACGCGAAGAAGCGAGGATATT615960.10428956795325627No Hit
CAGACGCGGAGGGAGCTGAGTCTT612170.10364787455994691No Hit
CAGACGCGTCAGCAAGAGCAAACC603750.10222226549090603No Hit
CAGACGCGGCAATAACTTGATTAC598450.10132491061371877No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)