FastQCFastQC Report
Tue 14 Jan 2025
4DNFIY4A3GPC.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIY4A3GPC.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26699161
Sequences flagged as poor quality0
Sequence length24
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGTGAACCGACAGAATC1386980.5194844886698875No Hit
CAGACGCGCGGTATTTGCATGTTG965270.3615357051856424No Hit
CAGACGCGGACCAGGTGACCTGGT655510.2455170782332823No Hit
CAGACGCGCTGTATTGAATCCGTT459300.1720278775801232No Hit
CAGACGCGTGCCTCGACCTGATTC415380.1555779224673015No Hit
CAGACGCGGCGAGGTTGGCTTTAA401600.15041671159629322No Hit
CAGACGCGTACCGCACTTAGGCCT359600.13468588020425062No Hit
CAGACGCGAGTTAACGAGCGAACT295840.11080497997671163No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)