FastQCFastQC Report
Tue 14 Jan 2025
4DNFIXKHS7JR.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIXKHS7JR.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92376065
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTGAATCTCTATTGCAC2079270.2250875267310856No Hit
CAGACGCGAACTTCGCTCATCATA1870740.20251349740866317No Hit
CAGACGCGTAAGGTCGAGTCCCTG1621990.17558552640232078No Hit
CAGACGCGCAGAGGGACATCCACC1523940.16497130506695645No Hit
CAGACGCGGATGGCTGAGCTAACG1465140.1586060198602311No Hit
CAGACGCGCTGTATTGAGGAAGGC1429670.15476628063773878No Hit
CAGACGCGCTGTATTGAAATATGC1145100.1239606818064831No Hit
CAGACGCGTGTCAATCTACTCCTC1110690.12023569092275148No Hit
GGGGGGGGGGGGGGGGGGGGGGGG1084350.11738430295769797No Hit
CAGACGCGTAAGGTTACCCGGTTC1067100.11551693612409232No Hit
CAGACGCGCAGTAATACTTGTTGC1036190.11217083126457054No Hit
CAGACGCGGCTTAAAGACAAACTG1009840.1093183607680193No Hit
CAGACGCGTACGGACACGTAGTTG1003450.10862662314096189No Hit
CAGACGCGGCGGTACACGCAATTG967290.10471218924512536No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)