FastQCFastQC Report
Tue 14 Jan 2025
4DNFIX9BXZI8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIX9BXZI8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72545616
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTGGTTATCTCCTTAAA3049060.4202955558334497No Hit
CAGACGCGCCGGTTCACCCGGAAT1871420.25796458879058937No Hit
CAGACGCGTGCAAGGTGGCCAATC1611420.22212506955623618No Hit
CAGACGCGGCTTGTGTGTTCATTC1366020.18829807717119668No Hit
CAGACGCGCCTAAGGACTAGGCTG1201330.1655964986223289No Hit
CAGACGCGTGCTAATCTTAATTCG1084510.1494935269417245No Hit
CAGACGCGTTGAAGCGATGCCTCA1063870.14664842049173585No Hit
CAGACGCGCGCTAATTGCTCAAAC1039090.1432326386200925No Hit
CAGACGCGATAGATGCTCAATGAG911930.12570435682839884No Hit
CAGACGCGACCAAATGAGTTTGTC888370.12245674500854745No Hit
CAGACGCGTGCTAGCCTAGGCTTT848370.11694297281864695No Hit
CAGACGCGCACGGATACCACAAAT770490.10620765836491071No Hit
CAGACGCGCAATTGAACAAGCCAT767960.1058589122738995No Hit
CAGACGCGGAGGTGGGACTTAGAG758540.10456041892317794No Hit
CAGACGCGAGGCGGTTGAGGAAGG747030.10297383097553406No Hit
CAGACGCGTAGTCAAACTATGGAT736770.1015595484088246No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)