FastQCFastQC Report
Tue 14 Jan 2025
4DNFIVZVRUD6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIVZVRUD6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27245689
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTCCCATAACCCAAAGC621900.22825629405077624No Hit
CAGACGCGCAACCTGCTCACATTA573640.21054340009533254No Hit
CAGACGCGACATAGTGATTCATCA498930.18312254830479788No Hit
CAGACGCGGCAACGGTGGCTTCGA446990.1640589819549067No Hit
CAGACGCGAGTCTTGCTGACCGCT396910.14567809241307864No Hit
CAGACGCGGAGAGCAACCTAGTAA368290.13517367830191412No Hit
CAGACGCGGGCGAGAGAGTATGTA353140.12961316559107755No Hit
CAGACGCGAAGACAAACGCTAATG307500.11286189165559367No Hit
CAGACGCGCAGGCCTTGCTAGAAA298010.10937877181230395No Hit
CAGACGCGTCCTAAGTGTCCCGGA276710.10156102126835552No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)