FastQCFastQC Report
Tue 14 Jan 2025
4DNFIVX1J7LT.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIVX1J7LT.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21746854
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTGAGGAAACAAGGTTC456100.20973148575881367No Hit
CAGACGCGTCAGGTAGAAGCTTGG417250.1918668327841811No Hit
CAGACGCGGTCCTAACTACCTCCT372590.17133052900433324No Hit
CAGACGCGGGATTGCGAGTGAGGG254110.11684908538954647No Hit
CAGACGCGGAAGCTATGTTGCAGT227240.10449327521120987No Hit
CAGACGCGTGTTGTTGAGCAAACC226200.10401504511871004No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)