FastQCFastQC Report
Tue 14 Jan 2025
4DNFIVUJBVL7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIVUJBVL7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences79248981
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGGTATAGTGAGAACCA2397650.3025464769067504No Hit
CAGACGCGTTTGTGCACACTTAGG2151310.27146216555137787No Hit
CAGACGCGCGGGAACCTCCTTAAA2016980.2545117898739922No Hit
CAGACGCGGAATGCATGTTCAAGC1854760.2340421260432358No Hit
CAGACGCGTAACCGTTGCACACTA1714940.21639899697890125No Hit
CAGACGCGTCCCTTTGAATAGTCA1579240.1992757484162478No Hit
CAGACGCGGGGAGGACTCTTGAAT1519710.1917639799053063No Hit
CAGACGCGAGAATCGTGGTGCTGT1454000.1834723906418431No Hit
CAGACGCGAGAATCGTGCCGGAAA1430630.1805234568252682No Hit
CAGACGCGCTGAGCAACAAAGGTA1212750.1530303588383048No Hit
CAGACGCGCGATATAACTTATCGC1127470.14226933719185614No Hit
CAGACGCGCAGGATCACCGCCCAT1014840.12805716706944156No Hit
CAGACGCGGCTCAGGACTCACTGT949810.1198513833256733No Hit
CAGACGCGCAGTAATACGCCACTT925790.11682042952703708No Hit
CAGACGCGTACCTCCTGCGGATAG884220.11157493621274449No Hit
CAGACGCGAGCCAAATGCAGGCAA866860.1093843717687676No Hit
CAGACGCGCAGGATCACTAAGCAT863030.10890108479754458No Hit
CAGACGCGTACAACAACCTTTGAC859300.10843041628510025No Hit
CAGACGCGAATGAGCTGGCCGGAA831780.10495781642921062No Hit
CAGACGCGCTTGAATCTTCCAGCA820110.10348524228973997No Hit
CAGACGCGGGGCTATGAGACTCAG798390.10074451304301314No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)