FastQCFastQC Report
Tue 14 Jan 2025
4DNFIVIEKAF6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIVIEKAF6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31822485
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTCCCATAACCCAAAGC687090.21591337068742433No Hit
CAGACGCGCAACCTGCTCACATTA628850.19761184583793504No Hit
CAGACGCGACATAGTGATTCATCA539800.1696284875301222No Hit
CAGACGCGGCAACGGTGGCTTCGA480990.1511478440480057No Hit
CAGACGCGAGTCTTGCTGACCGCT425950.13385189748694987No Hit
CAGACGCGGGCGAGAGAGTATGTA424000.13323912321743572No Hit
CAGACGCGGAGAGCAACCTAGTAA400030.1257067133506387No Hit
CAGACGCGAAGACAAACGCTAATG329790.10363426991952387No Hit
CAGACGCGCAGGCCTTGCTAGAAA325610.10232073328025765No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)