FastQCFastQC Report
Tue 14 Jan 2025
4DNFIUHQHFJN.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIUHQHFJN.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences89183301
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGACAATTGGATCTTTGA1872220.20992943510803663No Hit
CAGACGCGCCATCACGAGTCAATA1220700.13687540002584117No Hit
CAGACGCGCAGCTACCTGGATCCC1159810.1300478886736879No Hit
CAGACGCGGGATCCAGAACCAAAT927100.103954438735117No Hit
GGGGGGGGGGGGGGGGGGGGGGGG920930.10326260518210689No Hit
CAGACGCGTAACCGGACGGTTATG914800.10257525677368681No Hit
CAGACGCGTTCCTCACTTTCTTCG905030.1014797602075752No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)