FastQCFastQC Report
Tue 14 Jan 2025
4DNFIU2825RD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIU2825RD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences48272158
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTAACCGGACCGTGCTC2123380.43987675048627406No Hit
CAGACGCGTTAGGAGCTAGATTGA1550710.3212431480689138No Hit
CAGACGCGGCTCGACCTGGACCTC848260.17572448283749817No Hit
CAGACGCGGGTAACCGAAGGACAA810880.16798088869364405No Hit
CAGACGCGCGGATTAGAGTTACTC781540.1619028509145997No Hit
CAGACGCGACATTAGGATTGAGTG760090.1574592956875887No Hit
CAGACGCGACAGGCTGACCATGCT706580.14637423087652307No Hit
CAGACGCGTGGTCAAGATGACTTT699240.14485368563800274No Hit
CAGACGCGTTTGTACGAGCTTACT693490.14366252281491124No Hit
CAGACGCGCTTGAGCCTAAGAATC678300.1405157813744312No Hit
CAGACGCGGTGGTGACTTGATTAC661280.1369899394180803No Hit
CAGACGCGACTTGTCGAGGCGGAA658420.13639746538781217No Hit
CAGACGCGACTCAATTGTCATCCC646950.13402135450418437No Hit
CAGACGCGCAGCGATACATAACGC640250.13263339086684298No Hit
CAGACGCGGTTATTGTGTTGACCA639190.1324138025898904No Hit
CAGACGCGACAGTTAGATCCCTTT613910.12717682934332458No Hit
CAGACGCGGACACCTTGGCCATCA612160.12681430152760106No Hit
CAGACGCGTCCGTTAACAAAGCTC604760.12528132676397025No Hit
CAGACGCGGCTATACCTAAATACG587300.12166433495680885No Hit
CAGACGCGCCAAATAACGCGAACC581520.12046695737116207No Hit
CAGACGCGAGTGAGCCTAACCCTA580630.12028258608202268No Hit
CAGACGCGCGGTTAGACCTTTGAC574860.11908728008389433No Hit
CAGACGCGGTCAAGCGACCAAATG563340.11670081126267443No Hit
CAGACGCGGATAGCCGAAGTAAGG559940.11599647150641162No Hit
CAGACGCGGTTAGTTTGGCCACAT554520.11487367107142796No Hit
CAGACGCGACAATTGGAACCTGGA552740.1145049284931492No Hit
CAGACGCGCAAGGCTACCGCACTC549280.11378815921177586No Hit
CAGACGCGGCCATAAACAAGCTCA547330.11338419964568396No Hit
CAGACGCGAATTAGCGACGGTTGG542900.11246648637502386No Hit
CAGACGCGGCGCATTTGAATCGAG539780.11182015106927683No Hit
CAGACGCGCTGGATCCTAAATGCA536940.11123182021404554No Hit
CAGACGCGACTAAGACTATCCGTA535620.1109583706616141No Hit
CAGACGCGCCAACAAGACACCGTT526980.10916851904569917No Hit
CAGACGCGCGGCACTTGAGCCTTG517510.1072067256657554No Hit
CAGACGCGTGTGTTACTATCCTAG514650.10661425163548727No Hit
CAGACGCGGTGGCTAGAGGCCCTT513940.10646716892167944No Hit
CAGACGCGTTCGTAACTTGTCCAG512840.10623929429465324No Hit
CAGACGCGAAGCCTAACAGCTATG509230.10549145120050361No Hit
CAGACGCGGTCGATTCTAAATCCC508100.10525736181092214No Hit
CAGACGCGGGAGGCTTGTTGCGGC507830.10520142894792481No Hit
CAGACGCGCGCCTCTCTGGTAAAT507560.10514549608492746No Hit
CAGACGCGCCTTACGGATAGCCAA501990.10399162183716751No Hit
CAGACGCGGCTTCTTTGATTTGGT491080.10173151985457124No Hit
CAGACGCGTCTAACCACCTGATTC490010.10150985999010029No Hit
CAGACGCGTACGCCACTTGCAACC486360.10075373054587698No Hit
CAGACGCGGCTGACAGACCATTAT485400.10055485814410867No Hit
CAGACGCGGCGCATCCTCAAGGTA483890.10024204842882724No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)